Spg001520 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg001520
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold8: 44519114 .. 44521650 (+)
RNA-Seq Expression	Spg001520
Synteny	Spg001520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTCTCTATCAGCCCGATCATCATGGGGTAAAGCGACCTAAATTTCCCTTTCCCAATCTACCCCTGTCCCCCTCTAACTTCTACTATATTCATCAGGGTCAAAACCGTCAAATTCAGGGAGACAGTTTCTGAATTTTGGGCTTTGCTTTCTTCAATAATATTATGCCAAAAGAAACGATTCCTCCTCAAATTTGTAGTCAACAAAACCAAGTAAAAAAAAAAAAAAAAAAGAAAAAAAGTAAAAAGAAAAATGGTTCCAAAATGATAATAATCCTGAGCCCTTTTGCTCTTTTTGACCCATTTGGACTCGCTCTCTCTTGCCTCCATGGAATTGAAATGAAATGTTTTGGTCTCTTTTTTCCACTGCTCTCCCCTGTTCATCGAAACCCCAGATTGATTTTTGATTTCTTTTCTAATTCAGCAGTAGAGAAGAAAATGACAACTCCTCTGTCTGAAACGAAATCGGATTCTTGAGGTGACTTCATTGGACAGTGGGGTTCGGGAGTTCTTCAAAAATCAACTGTCCAGTAACATTTCATCGAGCACTTGGCGGGCACACATGGCTCAACAGGTATTCCATTTGTTTCCTCTTTCACCTTCATTTGGATTTTCCCTCTGAATGCCTTTTTCTGATGGGTCTCCTCTGGATTCTTCATGTGGGTCTTGCTCTTGTCTCTGTTTTATTGCTATTATTTCTCTGATGTTTTGGTGGGTCGCTCTGTCATGGGTCATGGGTTTCTTTTGTGTGTGTGTACGCCCTTTCTCTTTTATCGGATTGCTTTTGGTTTTCTGAATTGATTTGTTGTTGATTTGATTGAAGGGAGAGGGCTGGCCTCTTGGTCTACAGCCTCTGAATGTAAGAGTTGGAGTACCTGGAAACCGAGACTATTCAGGATCAGTGTCTTTCAATACCTTGATGACGGCTTCTTCTGTTTCACTCACTGATTCTTCATCCGACTTGGACACTGAGGTCAGTGTATTTTTCTTTTTTCACTTACATTTTTGAAAGGTTAAAGTCTTGTTGATGTGATTTTGGAATGAGATTATCAGAACTTCACATGACGTTAAGGGAATGTTATAGGTTAGTTTTTGTTCTTTGTGCTTGTACCTTTTAATGCACTCAGTATTGAACTATTTAGAGTAATGTAGATGGAGAAACCCCCCATTTTGCCAGTGTTTTATTGGCAACCAAGTGATTGTCAATCTTTTAATTGCCTTTTTAGTTCATTAAGCCCAATTTTTGTGATGTATACTCTTAGTGTCTGCATGTTACTGTGGTGCCATAATGCTAATATGATCGATCCATCGTCATTTATGACCCGAATCAAAAGTTTGTGGTGCGACGTTTTAAAGTGAGAAAAATTGAGGTATATGGTAGTAGTAGGGGTATCCCATTTGTCATGAAATCTAGTGTCCTTAACTCGTCGTTTCTATCTCGGATTTCGACCGAGACTATTGGAAGAGGATGATTGATTGTATAGTTTCATCTTATTGCAGTATGAATTAGACATAAGCTTTTGATTTTACTAGTAGTTAGAGGAAAGAGAGACAGTAGACACTTGTAATCTTTGGGACTTGGCTCAGATTTTTGCCATTCCATCTTGTAGATAAGTAATGCTTATGAATGATTGATGCTGAAGATTTCATCTCAGAACAGCTGCAGCTCAACAATTTTTAAAAATAAAGCTAAAATCAGATAGCCACAGTCTCATGACTCGTGACAATCGATCTTACTTCGTCATGCCGTGCGTTAATATTGCAGTCGACAGGATCTTTCTTCCATGACAAGAGCATAACACTCGGGAGTCTCATAGGAGTTTCCAACATCTTGGAACTCTCAAGAAGATCAATCAGGGGAAGAAGAACAGAGAGCACAAATGACAAGAGGAGCAATACCAGGTCTAGAACATGGCTTTTCTCTTTGTGTTCGAGGGACAGTACCGATGCAGATAGCGTCAACAACGGCCCGTCGTTAGGCCACTTCTTGGCAGAAGAAAGAAGAGCAGCCGACGAAAATAGGAGAAATCAGGGTCTAATCATGTATGGACCAGAAGAAATAGAATTAGCAGAATCTGCTCCAGAACCAAACTCCTTGTTCATCAATGGCTGTGTGGCACCTCCTCAATCAAGCCTGGGTTCAGATGCTGAAAGTGGGAGAAATGGAGGAACTGAGCCTGCAAATGACAATAGAGTTGCAATGCTTTGTGCTTGTGTTTGTGGACACTGAACCTTAGTTTTTTTTTTTTTTTTTTTTTTTCTTTCCTTTCTTTGTTTCATGATATTGATTGAATTTCTTGCTTTTTGAAACAAATAAAGATATCAATTTACAGTGACCCTTTCTTTCTTTTTTACTTCATTTTCATGTGGAATTCATTAAGCTTTCATCTGCTTTTTGTGTCATTTTCTCCTTTAACTAGCTTTCATTTTGTTTGTCTCATCATTTGAAGGGTATAGATTTTCCTTTGAGTTTTCTGTGTGCATAGCATTTTTTGGCCTATGTTCCCATATTTGAAGGGTTTATATATATATATATAT

mRNA sequence

ATGGCTCAACAGGGAGAGGGCTGGCCTCTTGGTCTACAGCCTCTGAATGTAAGAGTTGGAGTACCTGGAAACCGAGACTATTCAGGATCAGTGTCTTTCAATACCTTGATGACGGCTTCTTCTGTTTCACTCACTGATTCTTCATCCGACTTGGACACTGAGTCGACAGGATCTTTCTTCCATGACAAGAGCATAACACTCGGGAGTCTCATAGGAGTTTCCAACATCTTGGAACTCTCAAGAAGATCAATCAGGGGAAGAAGAACAGAGAGCACAAATGACAAGAGGAGCAATACCAGGTCTAGAACATGGCTTTTCTCTTTGTGTTCGAGGGACAGTACCGATGCAGATAGCGTCAACAACGGCCCGTCGTTAGGCCACTTCTTGGCAGAAGAAAGAAGAGCAGCCGACGAAAATAGGAGAAATCAGGGTCTAATCATGTATGGACCAGAAGAAATAGAATTAGCAGAATCTGCTCCAGAACCAAACTCCTTGTTCATCAATGGCTGTGTGGCACCTCCTCAATCAAGCCTGGGTTCAGATGCTGAAAGTGGGAGAAATGGAGGAACTGAGCCTGCAAATGACAATAGAGTTGCAATGCTTTGTGCTTGTGTTTGTGGACACTGA

Coding sequence (CDS)

ATGGCTCAACAGGGAGAGGGCTGGCCTCTTGGTCTACAGCCTCTGAATGTAAGAGTTGGAGTACCTGGAAACCGAGACTATTCAGGATCAGTGTCTTTCAATACCTTGATGACGGCTTCTTCTGTTTCACTCACTGATTCTTCATCCGACTTGGACACTGAGTCGACAGGATCTTTCTTCCATGACAAGAGCATAACACTCGGGAGTCTCATAGGAGTTTCCAACATCTTGGAACTCTCAAGAAGATCAATCAGGGGAAGAAGAACAGAGAGCACAAATGACAAGAGGAGCAATACCAGGTCTAGAACATGGCTTTTCTCTTTGTGTTCGAGGGACAGTACCGATGCAGATAGCGTCAACAACGGCCCGTCGTTAGGCCACTTCTTGGCAGAAGAAAGAAGAGCAGCCGACGAAAATAGGAGAAATCAGGGTCTAATCATGTATGGACCAGAAGAAATAGAATTAGCAGAATCTGCTCCAGAACCAAACTCCTTGTTCATCAATGGCTGTGTGGCACCTCCTCAATCAAGCCTGGGTTCAGATGCTGAAAGTGGGAGAAATGGAGGAACTGAGCCTGCAAATGACAATAGAGTTGCAATGCTTTGTGCTTGTGTTTGTGGACACTGA

Protein sequence

MAQQGEGWPLGLQPLNVRVGVPGNRDYSGSVSFNTLMTASSVSLTDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTNDKRSNTRSRTWLFSLCSRDSTDADSVNNGPSLGHFLAEERRAADENRRNQGLIMYGPEEIELAESAPEPNSLFINGCVAPPQSSLGSDAESGRNGGTEPANDNRVAMLCACVCGH

Homology

[Close]

BLAST of Spg001520 vs. NCBI nr
Match: XP_038902041.1 (uncharacterized protein At3g17950-like isoform X2 [Benincasa hispida])

HSP 1 Score: 370.5 bits (950), Expect = 9.2e-99
Identity = 181/208 (87.02%), Postives = 199/208 (95.67%), Query Frame = 0


Query: 1   MAQQGEGWPLGLQPLNVRVGVPGNRDYSGSVSFNTLMTASSVSLTDSSSDLDTESTGSFF 60
           MAQQGEGWPLGLQPLNVRVGVPGNRDY GSVSFNTLMTAS +S +DSSSDLDTESTGSFF
Sbjct: 1   MAQQGEGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFF 60

Query: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTNDKRSNTRSRTWLFSLCSRDSTDADSVN 120
           HDKSITLGSLIGVSNILELSRRSIRGRRTE+T +KRSNTRSR W FSLCSR+ST+ADSV+
Sbjct: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTENTKEKRSNTRSRAWFFSLCSRESTNADSVD 120

Query: 121 NGPSLGHFLAEERRAADENRRNQGLIMYGPEEIELAESAPEPNSLFINGCVAPPQSSLGS 180
           +GPSLGHFLAEERRAADENRRNQ +IMYGP+E+ELA+S PEPNSLFINGCVAPPQSS+GS
Sbjct: 121 SGPSLGHFLAEERRAADENRRNQSVIMYGPDELELAQSGPEPNSLFINGCVAPPQSSIGS 180

Query: 181 DAESGRNGGTEPANDNRVAMLCACVCGH 209
           +AE+GRNGGTEPANDNR A++CAC+CGH
Sbjct: 181 NAENGRNGGTEPANDNRAALICACICGH 208

[Close]

BLAST of Spg001520 vs. NCBI nr
Match: XP_038902040.1 (uncharacterized protein At3g17950-like isoform X1 [Benincasa hispida])

HSP 1 Score: 363.2 bits (931), Expect = 1.5e-96
Identity = 177/204 (86.76%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 5   GEGWPLGLQPLNVRVGVPGNRDYSGSVSFNTLMTASSVSLTDSSSDLDTESTGSFFHDKS 64
           GEGWPLGLQPLNVRVGVPGNRDY GSVSFNTLMTAS +S +DSSSDLDTESTGSFFHDKS
Sbjct: 6   GEGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKS 65

Query: 65  ITLGSLIGVSNILELSRRSIRGRRTESTNDKRSNTRSRTWLFSLCSRDSTDADSVNNGPS 124
           ITLGSLIGVSNILELSRRSIRGRRTE+T +KRSNTRSR W FSLCSR+ST+ADSV++GPS
Sbjct: 66  ITLGSLIGVSNILELSRRSIRGRRTENTKEKRSNTRSRAWFFSLCSRESTNADSVDSGPS 125

Query: 125 LGHFLAEERRAADENRRNQGLIMYGPEEIELAESAPEPNSLFINGCVAPPQSSLGSDAES 184
           LGHFLAEERRAADENRRNQ +IMYGP+E+ELA+S PEPNSLFINGCVAPPQSS+GS+AE+
Sbjct: 126 LGHFLAEERRAADENRRNQSVIMYGPDELELAQSGPEPNSLFINGCVAPPQSSIGSNAEN 185

Query: 185 GRNGGTEPANDNRVAMLCACVCGH 209
           GRNGGTEPANDNR A++CAC+CGH
Sbjct: 186 GRNGGTEPANDNRAALICACICGH 209

[Close]

BLAST of Spg001520 vs. NCBI nr
Match: XP_023532304.1 (uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.5 bits (924), Expect = 9.5e-96
Identity = 179/208 (86.06%), Postives = 195/208 (93.75%), Query Frame = 0


Query: 1   MAQQGEGWPLGLQPLNVRVGVPGNRDYSGSVSFNTLMTASSVSLTDSSSDLDTESTGSFF 60
           MAQQGEGWPLGLQPLN+RVGVPGNRDY GS+SFNTL+TAS +S TDSSSDLDTESTGSFF
Sbjct: 1   MAQQGEGWPLGLQPLNLRVGVPGNRDYFGSLSFNTLITASPISFTDSSSDLDTESTGSFF 60

Query: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTNDKRSNTRSRTWLFSLCSRDSTDADSVN 120
           HDKSITLGSLIGVSNILELSRRSIRGRRTEST +KRSNTRSRTWLFSLCSRD+TDADSV 
Sbjct: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTKNKRSNTRSRTWLFSLCSRDNTDADSVY 120

Query: 121 NGPSLGHFLAEERRAADENRRNQGLIMYGPEEIELAESAPEPNSLFINGCVAPPQSSLGS 180
           NGPSLG FL EERRAADENRRNQ ++MYG +E+ELA+SAPEPNSLFINGCVAPPQ SLGS
Sbjct: 121 NGPSLGQFLEEERRAADENRRNQSVMMYGGDEMELAQSAPEPNSLFINGCVAPPQPSLGS 180

Query: 181 DAESGRNGGTEPANDNRVAMLCACVCGH 209
           DA +GRNGGTEP ND+ +A+LC+CVCGH
Sbjct: 181 DAHTGRNGGTEPPNDHGIALLCSCVCGH 208

[Close]

BLAST of Spg001520 vs. NCBI nr
Match: KAG6605464.1 (hypothetical protein SDJN03_02781, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035409.1 hypothetical protein SDJN02_02205 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 356.3 bits (913), Expect = 1.8e-94
Identity = 179/209 (85.65%), Postives = 196/209 (93.78%), Query Frame = 0


Query: 1   MAQQGEGWPLGLQPLNVRVGVPGNRDYSGSVSFNTLMTASSVSLTDSSSDLDTESTGSFF 60
           MAQQGEGWPLGLQPLN+RVGVPGNRDY GS+SFNTL+TAS +S TDSSSDLDTESTGSFF
Sbjct: 1   MAQQGEGWPLGLQPLNLRVGVPGNRDYLGSLSFNTLITASPISFTDSSSDLDTESTGSFF 60

Query: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTNDKRSNTRSRTWLFSLCSRDSTDADSV- 120
           HDKSITLGSLIGVSNILELSRRSIRGRRTEST +KRSNTRSRTWLFSLCSRD+TDADSV 
Sbjct: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTKNKRSNTRSRTWLFSLCSRDNTDADSVY 120

Query: 121 NNGPSLGHFLAEERRAADENRRNQGLIMYGPEEIELAESAPEPNSLFINGCVAPPQSSLG 180
           NNGPSLG FL EERRAADENRRNQ ++MYG +E+ELA+SAPEPNSLFINGCVAPPQSSL 
Sbjct: 121 NNGPSLGQFLEEERRAADENRRNQSVMMYGGDEMELAQSAPEPNSLFINGCVAPPQSSLS 180

Query: 181 SDAESGRNGGTEPANDNRVAMLCACVCGH 209
           SDA++ RNGGTEP ND+ +A+LC+CVCGH
Sbjct: 181 SDAQTRRNGGTEPPNDHGIALLCSCVCGH 209

[Close]

BLAST of Spg001520 vs. NCBI nr
Match: XP_023006892.1 (uncharacterized protein At3g17950-like [Cucurbita maxima])

HSP 1 Score: 354.8 bits (909), Expect = 5.2e-94
Identity = 177/208 (85.10%), Postives = 194/208 (93.27%), Query Frame = 0


Query: 1   MAQQGEGWPLGLQPLNVRVGVPGNRDYSGSVSFNTLMTASSVSLTDSSSDLDTESTGSFF 60
           MAQQGEGWPLGLQPLN+RVGVPGNRDY GS+SFNTL+TAS +S TDSSSDLDTESTGSFF
Sbjct: 1   MAQQGEGWPLGLQPLNLRVGVPGNRDYLGSLSFNTLITASPISFTDSSSDLDTESTGSFF 60

Query: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTNDKRSNTRSRTWLFSLCSRDSTDADSVN 120
           HDKSITLGSLIGVSNILELSRRSIRGRRTEST +KRSNTRSRTWLFSLCSRD+TDADSV 
Sbjct: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTKNKRSNTRSRTWLFSLCSRDNTDADSVY 120

Query: 121 NGPSLGHFLAEERRAADENRRNQGLIMYGPEEIELAESAPEPNSLFINGCVAPPQSSLGS 180
           NGPSLG FL EERRAADENRRNQ ++MYG +E+ELA+ APEPNSLFINGCVAPPQ SLGS
Sbjct: 121 NGPSLGQFLEEERRAADENRRNQSVMMYGGDEMELAQYAPEPNSLFINGCVAPPQPSLGS 180

Query: 181 DAESGRNGGTEPANDNRVAMLCACVCGH 209
           DA++GRNGGTEP ND+ +A+LC+ VCGH
Sbjct: 181 DAQTGRNGGTEPPNDHGIALLCSWVCGH 208

[Close]

BLAST of Spg001520 vs. ExPASy Swiss-Prot
Match: Q6DR24 (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.5e-08
Identity = 63/182 (34.62%), Postives = 83/182 (45.60%), Query Frame = 0


Query: 38  TASSVSLTDSSSDLDTESTGSFFHDKSITLGSLIGVSNILEL-------SRR----SIRG 97
           T SSV    SSSDLDTESTGSFFHD+SITLG+L+G S    +       SRR    S+  
Sbjct: 11  TISSV----SSSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAI 70

Query: 98  RRTESTNDKRSNTRSRT---------------WLFSLCSRDSTDADSVNNG------PSL 157
            R  S+N +R++ R R                W F     D    + ++ G       SL
Sbjct: 71  SRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSL 130

Query: 158 GHFLAEERRAADENRRNQGLIMYGPEEIELAESA------PEP----NSLFINGCVAPPQ 178
           G +L  ERR  DE        +Y   E EL ++        +P     +LF +G V PP 
Sbjct: 131 GEYLEVERRFGDE-------AVYNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPA 181

[Close]

BLAST of Spg001520 vs. ExPASy TrEMBL
Match: A0A6J1KX21 (uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC111499548 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.5e-94
Identity = 177/208 (85.10%), Postives = 194/208 (93.27%), Query Frame = 0


Query: 1   MAQQGEGWPLGLQPLNVRVGVPGNRDYSGSVSFNTLMTASSVSLTDSSSDLDTESTGSFF 60
           MAQQGEGWPLGLQPLN+RVGVPGNRDY GS+SFNTL+TAS +S TDSSSDLDTESTGSFF
Sbjct: 1   MAQQGEGWPLGLQPLNLRVGVPGNRDYLGSLSFNTLITASPISFTDSSSDLDTESTGSFF 60

Query: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTNDKRSNTRSRTWLFSLCSRDSTDADSVN 120
           HDKSITLGSLIGVSNILELSRRSIRGRRTEST +KRSNTRSRTWLFSLCSRD+TDADSV 
Sbjct: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTKNKRSNTRSRTWLFSLCSRDNTDADSVY 120

Query: 121 NGPSLGHFLAEERRAADENRRNQGLIMYGPEEIELAESAPEPNSLFINGCVAPPQSSLGS 180
           NGPSLG FL EERRAADENRRNQ ++MYG +E+ELA+ APEPNSLFINGCVAPPQ SLGS
Sbjct: 121 NGPSLGQFLEEERRAADENRRNQSVMMYGGDEMELAQYAPEPNSLFINGCVAPPQPSLGS 180

Query: 181 DAESGRNGGTEPANDNRVAMLCACVCGH 209
           DA++GRNGGTEP ND+ +A+LC+ VCGH
Sbjct: 181 DAQTGRNGGTEPPNDHGIALLCSWVCGH 208

[Close]

BLAST of Spg001520 vs. ExPASy TrEMBL
Match: A0A6J1G630 (uncharacterized protein At3g17950-like OS=Cucurbita moschata OX=3662 GN=LOC111451215 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.3e-94
Identity = 178/209 (85.17%), Postives = 195/209 (93.30%), Query Frame = 0


Query: 1   MAQQGEGWPLGLQPLNVRVGVPGNRDYSGSVSFNTLMTASSVSLTDSSSDLDTESTGSFF 60
           MAQQGEGWPLGLQPLN+RVGVPGNRDY GS+SFNTL+TAS +S TDSSSDLDTESTGSFF
Sbjct: 1   MAQQGEGWPLGLQPLNLRVGVPGNRDYLGSLSFNTLITASPISFTDSSSDLDTESTGSFF 60

Query: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTNDKRSNTRSRTWLFSLCSRDSTDADSV- 120
           HDKSITLGSLIGVSNILELSRRSIRGRRTEST +KRSNTRSRTWLFSLCSRD+TDADSV 
Sbjct: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTKNKRSNTRSRTWLFSLCSRDNTDADSVY 120

Query: 121 NNGPSLGHFLAEERRAADENRRNQGLIMYGPEEIELAESAPEPNSLFINGCVAPPQSSLG 180
           NN PSLG FL EERRAADENRRNQ ++MYG +E+ELA+SAPEPNSLFINGCVAPPQ SLG
Sbjct: 121 NNSPSLGQFLEEERRAADENRRNQSVMMYGGDEMELAQSAPEPNSLFINGCVAPPQPSLG 180

Query: 181 SDAESGRNGGTEPANDNRVAMLCACVCGH 209
           SDA++ RNGGTEP ND+ +A+LC+CVCGH
Sbjct: 181 SDAQTRRNGGTEPPNDHGIALLCSCVCGH 209

[Close]

BLAST of Spg001520 vs. ExPASy TrEMBL
Match: A0A0A0KCA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190490 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.8e-92
Identity = 175/209 (83.73%), Postives = 191/209 (91.39%), Query Frame = 0


Query: 1   MAQQGEGWPLGLQPLNVRVGVPGNRDYSGSVSFNTLMTASSVSLTDSSSDLDTESTGSFF 60
           MAQQG+GWPLGLQPLNVRVGVPGNRDY GSVSFNTLMTAS +S +DSSSDLDTESTGSFF
Sbjct: 1   MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFF 60

Query: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTNDKRSNTRSRTWLFSLCSRDSTDADSVN 120
           HDKSITLGSLIGVSNILELSRRSIRGRRTEST DKRSNT+SRTW FSLCSR+STDADS+ 
Sbjct: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNTKSRTWFFSLCSRESTDADSIE 120

Query: 121 NGPSLGHFLAEERRAADENRR-NQGLIMYGPEEIELAESAPEPNSLFINGCVAPPQSSLG 180
           +GPSLGHFLAEERRAADENRR NQ  IMYG +E+ELA+  PEPNSLFINGCVAPPQ S+G
Sbjct: 121 SGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQPSIG 180

Query: 181 SDAESGRNGGTEPANDNRVAMLCACVCGH 209
           S+ E   NGGTEP NDNRVA++C+C+CGH
Sbjct: 181 SETE---NGGTEPTNDNRVALICSCICGH 206

[Close]

BLAST of Spg001520 vs. ExPASy TrEMBL
Match: A0A6J1JI06 (uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC111484531 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.0e-92
Identity = 178/208 (85.58%), Postives = 188/208 (90.38%), Query Frame = 0


Query: 1   MAQQGEGWPLGLQPLNVRVGVPGNRDYSGSVSFNTLMTASSVSLTDSSSDLDTESTGSFF 60
           MAQQGEGWPLGLQPLNVRVGVPGNRD SGSVSFNTLMTAS VS TDSS+DLDTESTGSFF
Sbjct: 1   MAQQGEGWPLGLQPLNVRVGVPGNRDCSGSVSFNTLMTASPVSFTDSSTDLDTESTGSFF 60

Query: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTNDKRSNTRSRTWLFSLCSRDSTDADSVN 120
           H+ SITLGSLIGVSNILELSRRSIRGRRTE TN KRSN RSRTWLF LCSR+ TD DS++
Sbjct: 61  HNNSITLGSLIGVSNILELSRRSIRGRRTEGTNGKRSNARSRTWLFFLCSREITDVDSID 120

Query: 121 NGPSLGHFLAEERRAADENRRNQGLIMYGPEEIELAESAPEPNSLFINGCVAPPQSSLGS 180
           N PSLGHFLAEERRAADENRRNQG       E+ELAESAPEP+SLFINGCVAPPQ SL S
Sbjct: 121 NSPSLGHFLAEERRAADENRRNQGF------ELELAESAPEPSSLFINGCVAPPQCSLDS 180

Query: 181 DAESGRNGGTEPANDNRVAMLCACVCGH 209
           DAESGRNGGTEPAND+RVA+LCAC+CGH
Sbjct: 181 DAESGRNGGTEPANDSRVALLCACICGH 202

[Close]

BLAST of Spg001520 vs. ExPASy TrEMBL
Match: A0A6J1FU26 (uncharacterized protein At3g17950-like OS=Cucurbita moschata OX=3662 GN=LOC111448789 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.0e-92
Identity = 178/208 (85.58%), Postives = 188/208 (90.38%), Query Frame = 0


Query: 1   MAQQGEGWPLGLQPLNVRVGVPGNRDYSGSVSFNTLMTASSVSLTDSSSDLDTESTGSFF 60
           MAQQGEGWPLGLQPLNVRVGVPGNRD  GSVSFNTLMTAS VS TDSS+DLDTESTG FF
Sbjct: 1   MAQQGEGWPLGLQPLNVRVGVPGNRDCLGSVSFNTLMTASPVSFTDSSTDLDTESTGFFF 60

Query: 61  HDKSITLGSLIGVSNILELSRRSIRGRRTESTNDKRSNTRSRTWLFSLCSRDSTDADSVN 120
           HD +ITLGSLIGVSNILELSRRSIRGRRTESTN KRSN RSRTWLF LCSR+STD DS++
Sbjct: 61  HDNTITLGSLIGVSNILELSRRSIRGRRTESTNGKRSNARSRTWLFFLCSRESTDVDSID 120

Query: 121 NGPSLGHFLAEERRAADENRRNQGLIMYGPEEIELAESAPEPNSLFINGCVAPPQSSLGS 180
           N PSLGHFLAEERRAADENRRNQG       E+ELAESAPEP+SLFINGCVAPPQ SL S
Sbjct: 121 NSPSLGHFLAEERRAADENRRNQGF------ELELAESAPEPSSLFINGCVAPPQCSLDS 180

Query: 181 DAESGRNGGTEPANDNRVAMLCACVCGH 209
           DAESGRNGGTEPAND+RVA+LCAC+CGH
Sbjct: 181 DAESGRNGGTEPANDSRVALLCACICGH 202

[Close]

BLAST of Spg001520 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24
Identity = 75/170 (44.12%), Postives = 100/170 (58.82%), Query Frame = 0


Query: 1   MAQQGEGWPLGLQPLNVRVG--VPGNRDY-------SGSVSFNTLMTASSVSLTDSSSDL 60
           MA Q EGWPLGL+P+N R+G    G   +       +GS+SF++L++ S  S   SSSDL
Sbjct: 1   MAHQEEGWPLGLRPVNARIGGLTRGTHHHHHHEQVSAGSISFSSLLSPSPSS--QSSSDL 60

Query: 61  DTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTES------TNDKRSNTRSRTWL 120
           D++S GSFF D+S TLG+LIG+S+ LELSRRS R R  ++       + K   T  + W+
Sbjct: 61  DSQSMGSFFRDRSYTLGNLIGISSFLELSRRSNRTRNDQTGAARNHQHHKNLKTYYKPWI 120

Query: 121 FSLCSRDSTDA-------------DSVNNGPSLGHFLAEERRAADENRRN 143
           FS+CS+ ST+A             D  NN  SLGHFL  ERRA     R+
Sbjct: 121 FSICSKLSTNATVISHNRIINEENDGRNNVQSLGHFLIMERRAVGSTIRS 168

[Close]

BLAST of Spg001520 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-09
Identity = 63/182 (34.62%), Postives = 83/182 (45.60%), Query Frame = 0


Query: 38  TASSVSLTDSSSDLDTESTGSFFHDKSITLGSLIGVSNILEL-------SRR----SIRG 97
           T SSV    SSSDLDTESTGSFFHD+SITLG+L+G S    +       SRR    S+  
Sbjct: 11  TISSV----SSSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAI 70

Query: 98  RRTESTNDKRSNTRSRT---------------WLFSLCSRDSTDADSVNNG------PSL 157
            R  S+N +R++ R R                W F     D    + ++ G       SL
Sbjct: 71  SRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSL 130

Query: 158 GHFLAEERRAADENRRNQGLIMYGPEEIELAESA------PEP----NSLFINGCVAPPQ 178
           G +L  ERR  DE        +Y   E EL ++        +P     +LF +G V PP 
Sbjct: 131 GEYLEVERRFGDE-------AVYNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPA 181

The following BLAST results are available for this feature:

BLAST of Spg001520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902041.1	9.2e-99	87.02	uncharacterized protein At3g17950-like isoform X2 [Benincasa hispida]	[more]
XP_038902040.1	1.5e-96	86.76	uncharacterized protein At3g17950-like isoform X1 [Benincasa hispida]	[more]
XP_023532304.1	9.5e-96	86.06	uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo]	[more]
KAG6605464.1	1.8e-94	85.65	hypothetical protein SDJN03_02781, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023006892.1	5.2e-94	85.10	uncharacterized protein At3g17950-like [Cucurbita maxima]	[more]

BLAST of Spg001520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DR24	3.5e-08	34.62	Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV...	[more]

BLAST of Spg001520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KX21	2.5e-94	85.10	uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC1114995...	[more]
A0A6J1G630	3.3e-94	85.17	uncharacterized protein At3g17950-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A0A0KCA6	1.8e-92	83.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190490 PE=4 SV=1	[more]
A0A6J1JI06	4.0e-92	85.58	uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC1114845...	[more]
A0A6J1FU26	4.0e-92	85.58	uncharacterized protein At3g17950-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of Spg001520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02440.1	1.2e-24	44.12	unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bac...	[more]
AT3G17950.1	2.5e-09	34.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33544:SF3	60S RIBOSOMAL PROTEIN L36	coord: 1..206
IPR040344	Uncharacterized protein At3g17950-like	PANTHER	PTHR33544	FAMILY NOT NAMED	coord: 1..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg001520.1	Spg001520.1	mRNA