Spg000601 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCCTCAAAGCTTTGTTTCTGTATTCCTCGCCATAAAAATGGCCACAAAGCTGATGGAGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCGCCGTGGTGCAAAAGGAGGTAAGCATTCCTCTAGTAGTGATGATAGTAGTGGAAATGGAAACACAGGTGATGCAAGTGCAAGCAGCGCAGCTGCCGTGGCTGCTGTTGCTGTCACGGCGGTGACTGTCGATGCCTTTGAAGATGATGGTGGCAGCACGCATGGCCACGGCGGTGAGGGAGGCGGTGGAGGTGGCGGAGATTAG ATGGAGTCCTCAAAGCTTTGTTTCTGTATTCCTCGCCATAAAAATGGCCACAAAGCTGATGGAGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCGCCGTGGTGCAAAAGGAGGTAAGCATTCCTCTAGTAGTGATGATAGTAGTGGAAATGGAAACACAGGTGATGCAAGTGCAAGCAGCGCAGCTGCCGTGGCTGCTGTTGCTGTCACGGCGGTGACTGTCGATGCCTTTGAAGATGATGGTGGCAGCACGCATGGCCACGGCGGTGAGGGAGGCGGTGGAGGTGGCGGAGATTAG ATGGAGTCCTCAAAGCTTTGTTTCTGTATTCCTCGCCATAAAAATGGCCACAAAGCTGATGGAGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCGCCGTGGTGCAAAAGGAGGTAAGCATTCCTCTAGTAGTGATGATAGTAGTGGAAATGGAAACACAGGTGATGCAAGTGCAAGCAGCGCAGCTGCCGTGGCTGCTGTTGCTGTCACGGCGGTGACTGTCGATGCCTTTGAAGATGATGGTGGCAGCACGCATGGCCACGGCGGTGAGGGAGGCGGTGGAGGTGGCGGAGATTAG MESSKLCFCIPRHKNGHKADGGSEKSSKSKPSRRKSRRGAKGGKHSSSSDDSSGNGNTGDASASSAAAVAAVAVTAVTVDAFEDDGGSTHGHGGEGGGGGGGD Homology
BLAST of Spg000601 vs. NCBI nr
Match: TYK15390.1 (tropomyosin [Cucumis melo var. makuwa]) HSP 1 Score: 140.6 bits (353), Expect = 7.7e-30 Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Spg000601 vs. NCBI nr
Match: KAA0061866.1 (tropomyosin [Cucumis melo var. makuwa]) HSP 1 Score: 140.6 bits (353), Expect = 7.7e-30 Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Spg000601 vs. NCBI nr
Match: KAG6605437.1 (hypothetical protein SDJN03_02754, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 139.4 bits (350), Expect = 1.7e-29 Identity = 91/108 (84.26%), Postives = 95/108 (87.96%), Query Frame = 0
BLAST of Spg000601 vs. NCBI nr
Match: KAG7035385.1 (hypothetical protein SDJN02_02181 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 139.4 bits (350), Expect = 1.7e-29 Identity = 91/108 (84.26%), Postives = 95/108 (87.96%), Query Frame = 0
BLAST of Spg000601 vs. NCBI nr
Match: KAG7010529.1 (hypothetical protein SDJN02_27323, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.5 bits (345), Expect = 6.5e-29 Identity = 91/105 (86.67%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of Spg000601 vs. ExPASy TrEMBL
Match: A0A5D3CVK1 (Tropomyosin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00300 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.7e-30 Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Spg000601 vs. ExPASy TrEMBL
Match: A0A5A7V5U9 (Tropomyosin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001080 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.7e-30 Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Spg000601 vs. ExPASy TrEMBL
Match: A0A0A0KFD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188150 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.6e-28 Identity = 83/101 (82.18%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of Spg000601 vs. ExPASy TrEMBL
Match: A0A6J1D515 (circumsporozoite protein-like OS=Momordica charantia OX=3673 GN=LOC111017006 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 6.1e-25 Identity = 84/109 (77.06%), Postives = 91/109 (83.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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