Spg000371 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGCGGCCGAGGTGTATGAATCGATTGACTCGTTTTGGAACTCAGCTCAACTCGTCCGAGTCACGACGGTTCTTCGTAACCGCCACCGTCAAACCCCATTTCCGGCGTCCCAGTCATGCCCTAGCCTTCAAAACCCACCGGCATTTTTCTACTCCCCTCCACCTCGGAATTTTCTTTTCCAAAATCTCCGACCGTCCTCGTCGGCTTCCCCGTCTGCCCGTGGCGATGGACCCTGTTCCTCCGGAATCTGATTCCCCTGCCGTGGAAGATTTTGTCCACATCGAGGACCCTAATATCGAGAGTTTGGTTGAGAGTATTGTTAGTACTACTGATGAACAGACTACTGATGAGCAGATTAGTGACGAGGCCGCCTCTGTGATTTTGCCTGAGACGGAGGAGGGTTCGGCGGAGCAGCGGAGGGTCCTTCCGGAGGAGCTTTCTAGAAGCGTGATGGTATTGACGTGCGAGACTGCTGATGAAGGTGGCATTTGTGATGTATACCTAGTTGGAACAGCTCACGTTTCTCAAGTAATTTATTTATTTTCGATCGTCATTAATTGGCTTGTATTATAGCATTCGATTTTTGAATTTTCGGAGAATATGAAGGGGAAAATATGGATTGCAGTGATTGTTCTTGACTCCTTGCGGAATTTATTTGTTGTTAGCTGATGAAATTGATTGAGGTACTCGGGTTAGAAATGAAGTAAATCACTTGTTTGGATGCAGGAATCGTGCAGAGAAGTTCAAGCTGTAATCAGTTATTTGAAACCTCAGGTGCTTCCTCTTTTTTGATACTCAATTATACTAGATTGAAAGATGGATCATTATGCAGGTTAGCTGCCTGCTTTCCAAGGATGTTTTTACATGTTGCATTTGCATTCGTGTTGTTCATTGAGTGTTTTGTTTTTCTATTAAATATATGTTAATGCAGGTTGTCTTCTTGGAATTATGCTCAAGCCGAGTGGCTGTCCTCACACCTCAGAATTTGAAGGTATGATTGCAATTCAGTTTTCTGCTTCTAATACTTCTGAGCTTGAAGTCCTTAATGATCACGCAGTGTGGTTATTGATTAACATCGGCTATACAAGTTTGGTGCTATTCAGCATTTGTAGGCCTCTTTTTTCCCCTCAATTTTTTGCTCTCTCTGACCATTAGTTCTCCAGGTTCCAACTATGGGAGAAATGGTTGAAATGTGGAAGAAAAAGCATAACATCTTTGGTATACTTTACAGCTGGTTTCTTGCAAAGGCATGTTCTTTCTTTATCTTCAGTAGATTTTACACTTCATTTTTTCAACAATTTAATTGAAAGATCGTGTCTTTATTCTAATTATACTTCTTTGCTTTTATCTTAGGTAGCCAACAAACTTGAAGTTTTTCCTGGTTCTGAGTTTCGTATAGCCTATGAAGAAGCAATGAAGTATGGTGGTAAGGTTATTCTTGGTGATCGTCCAGTACAGGTATGATCTCTTCTTCTTTTTTCTTTTTTTTTCTTCACTAGCGCTTGTGATAGGATTTCATGAATAAATTGTCTCTTTCCATCATATTTATTGCTTTCTTATATTTGCATCAAAAGTCAATTTGATTGTCCCAATAACCTTGCTTCGTTGAGACTTGAGACTTGAGAGTAATTTACCTTGAAGAAGTGTATGCTGTGGAATGGTCTGTTCATGGGATAATACCTAGTCTGCTCAAGCCTCAAAACATACTTAAGGACTTGTATGATATTCGCTTTAAAGGTGTTTTACTTTGTTGTATGATATTCGCTTTAAAGGTGTTTTACTTTGTGTTGGCCGTTGCATCCATCATTTCCATCTTATTGTCCATCCTCTTTCTGTGCTTTTCTAAAAAGACTACCCTCAATCCCATGCATGCTATAGCTATACTTTGTTGGTTGATTGCAGAATTCGGAAGTTGACTATTGCTTTTCAATTGGCTGTTTTTGCATTGATTGTTCATCAATTTTACTGATTAGTGTGCCTATTGTATTTGCTTCTCCTAATGGTTGGTTAGGTAACAAAAATATTGTATAATACATCATTATGGATTGGATTAGTCTTTCTGGTGGATATTCTTAATTCTCTTATGTGTTGAACCTCTTCGTTCTCAATATAAAAATGAAATGACCCTCCCCTAATTCTTTCGAATTGTGAGACACATTAAAATGTAATATAGGTCCTAAAAATTTTCTGGTTTTGTTTGAACGGATATTCATTTGCTGAATGTGCAGACTACTGAATTTACATGACATCCTACTCCTATTGCATTTTTCCTATGTTAGTTTTTAAGCATGACTTGTCTCCTTACCTTTTCTTTCTGGTTATTTCAAATTTATATCATTCTGTCATCTCATTCTATTCTGCATATTCTTCAATGAGGTGGCTTTCGGTTTGTTATTTTTATAAAGCCAAATAATCTGTAATATTTTGACGTTTACTCAACAGATTACAATAAGGAGGGCCTGGGCGAAAATGCCCCTTTGGCATAAGATCAAATTGCTTTACTCCTTCGTTTTTCAAGCATTCTTTTTGCCAAGCCCCGAGGAACTAACCAAAATGGTATTATTTCATTTATTCTCTCTCTCTCGCTATCCTCACAAGTGGTATCATTCTCCTCTATTTCTCTGTATAATTGTGAGGCAAATAGAAACTGTTTCCAAAACTAACGCTATTTCTATCTTCAGTTGAAGGACATGGACGATGTTGACATGCTCACGCTCATAATTCAAGAAATGAGCAAGGAATTTCCCACATTAATGGACACCCTTGTGCACGAGCGAGATCAGTTAGTATATTTACCTTTGTGCTGTTTGAAGCCGATGATCTTTTTCCTCTTTCGAAAATTTGTTTTATTGATTATGCTTCAATGGGTTTTCTAAATCTAGGAAGAAATTTAAAGGAGCTATTTAGAGTTTGACCTTTTCTGTTGATAAAATCTTTTCTTTTTCTGCATAAAATTCAATAAGTACATGTTTGGGTGACTTCTTTATAAAAGCTCTTTTTCTTTTATTTTCCTTTGGTTCTTTCTCATAGATAACCTTTTTTTTAAGAATAATTTAAGTTGTTTTCACTTGGCAGATTATGAGGTTGGTTAGTGGCTTTTAAGTGCATGATAACCCAAATATTTATACAAGTCATCCTATCAGTTGTTTTGCTGGACTAAGAAACATAGATCCCCGAAGGGTTTACCGCAAAAGGTTACAGGTTACATTATAAAATAAAGAATACGGTGTTGATTTATATTTCGTGGAATTATAAGAAGATTCTTCAAAGGAAGGCCCAACTCTTAGGAAAGTTCTAACCTTACTAGTCAAAATCAGTTATCTTCTCGTTCTGATTTCATATGATACATTCTTTATTATTGTTTGCATTAGCTTTTTTTCTTTCCAGCTTCTATTTTTCACATTCTTGACTTTTTTTTGCCCCTATCTATACTTGCTTTCAGGTACATGTCGACTACGTTGCTGAGAGTAGCCAAGGAGCATCATTCAGTTGTTGCGGTTGTGGGGAAAGGTCACCTTAGTGGAATTAAGAAGAATTGGCAGCAGCCTGTTACGGTAGGTTACACTCTCCCATTTCTGAGGAATTCGACGAAGTCACCGTAGTTCTTTATATGAATTACTCGAATGCTGCTTCACTACCATGTCTATTTTTCTGGAAAATGCAGCTCAAGGATCTTTTGGAAATGCCTGAGCAAAAACGAGTCCCTGTTGTGAAGATCTTTACATCGCTAGGTGTAGCAGTTGCTGGAGTTGCAATCATATCGGGCATCTACCTTGCTTGCAAAAAATAG ATGAATCGATTGACTCGTTTTGGAACTCAGCTCAACTCGTCCGAGTCACGACGGTTCTTCGTAACCGCCACCGTCAAACCCCATTTCCGGCGTCCCAGTCATGCCCTAGCCTTCAAAACCCACCGGCATTTTTCTACTCCCCTCCACCTCGGAATTTTCTTTTCCAAAATCTCCGACCGTCCTCGTCGGCTTCCCCGTCTGCCCGTGGCGATGGACCCTGTTCCTCCGGAATCTGATTCCCCTGCCGTGGAAGATTTTGTCCACATCGAGGACCCTAATATCGAGAGTTTGGTTGAGAGTATTGTTAGTACTACTGATGAACAGACTACTGATGAGCAGATTAGTGACGAGGCCGCCTCTGTGATTTTGCCTGAGACGGAGGAGGGTTCGGCGGAGCAGCGGAGGGTCCTTCCGGAGGAGCTTTCTAGAAGCGTGATGGTATTGACGTGCGAGACTGCTGATGAAGGTGGCATTTGTGATGTATACCTAGTTGGAACAGCTCACGTTTCTCAAGAATCGTGCAGAGAAGTTCAAGCTGTAATCAGTTATTTGAAACCTCAGGTTGTCTTCTTGGAATTATGCTCAAGCCGAGTGGCTGTCCTCACACCTCAGAATTTGAAGGTAGCCAACAAACTTGAAGTTTTTCCTGGTTCTGAGTTTCGTATAGCCTATGAAGAAGCAATGAAGTATGGTGGTAAGGTTATTCTTGGTGATCGTCCAGTACAGTTGAAGGACATGGACGATGTTGACATGCTCACGCTCATAATTCAAGAAATGAGCAAGGAATTTCCCACATTAATGGACACCCTTGTGCACGAGCGAGATCAGTACATGTCGACTACGTTGCTGAGAGTAGCCAAGGAGCATCATTCAGTTGTTGCGGTTGTGGGGAAAGGTCACCTTAGTGGAATTAAGAAGAATTGGCAGCAGCCTGTTACGCTCAAGGATCTTTTGGAAATGCCTGAGCAAAAACGAGTCCCTGTTGTGAAGATCTTTACATCGCTAGGTGTAGCAGTTGCTGGAGTTGCAATCATATCGGGCATCTACCTTGCTTGCAAAAAATAG ATGAATCGATTGACTCGTTTTGGAACTCAGCTCAACTCGTCCGAGTCACGACGGTTCTTCGTAACCGCCACCGTCAAACCCCATTTCCGGCGTCCCAGTCATGCCCTAGCCTTCAAAACCCACCGGCATTTTTCTACTCCCCTCCACCTCGGAATTTTCTTTTCCAAAATCTCCGACCGTCCTCGTCGGCTTCCCCGTCTGCCCGTGGCGATGGACCCTGTTCCTCCGGAATCTGATTCCCCTGCCGTGGAAGATTTTGTCCACATCGAGGACCCTAATATCGAGAGTTTGGTTGAGAGTATTGTTAGTACTACTGATGAACAGACTACTGATGAGCAGATTAGTGACGAGGCCGCCTCTGTGATTTTGCCTGAGACGGAGGAGGGTTCGGCGGAGCAGCGGAGGGTCCTTCCGGAGGAGCTTTCTAGAAGCGTGATGGTATTGACGTGCGAGACTGCTGATGAAGGTGGCATTTGTGATGTATACCTAGTTGGAACAGCTCACGTTTCTCAAGAATCGTGCAGAGAAGTTCAAGCTGTAATCAGTTATTTGAAACCTCAGGTTGTCTTCTTGGAATTATGCTCAAGCCGAGTGGCTGTCCTCACACCTCAGAATTTGAAGGTAGCCAACAAACTTGAAGTTTTTCCTGGTTCTGAGTTTCGTATAGCCTATGAAGAAGCAATGAAGTATGGTGGTAAGGTTATTCTTGGTGATCGTCCAGTACAGTTGAAGGACATGGACGATGTTGACATGCTCACGCTCATAATTCAAGAAATGAGCAAGGAATTTCCCACATTAATGGACACCCTTGTGCACGAGCGAGATCAGTACATGTCGACTACGTTGCTGAGAGTAGCCAAGGAGCATCATTCAGTTGTTGCGGTTGTGGGGAAAGGTCACCTTAGTGGAATTAAGAAGAATTGGCAGCAGCCTGTTACGCTCAAGGATCTTTTGGAAATGCCTGAGCAAAAACGAGTCCCTGTTGTGAAGATCTTTACATCGCTAGGTGTAGCAGTTGCTGGAGTTGCAATCATATCGGGCATCTACCTTGCTTGCAAAAAATAG MNRLTRFGTQLNSSESRRFFVTATVKPHFRRPSHALAFKTHRHFSTPLHLGIFFSKISDRPRRLPRLPVAMDPVPPESDSPAVEDFVHIEDPNIESLVESIVSTTDEQTTDEQISDEAASVILPETEEGSAEQRRVLPEELSRSVMVLTCETADEGGICDVYLVGTAHVSQESCREVQAVISYLKPQVVFLELCSSRVAVLTPQNLKVANKLEVFPGSEFRIAYEEAMKYGGKVILGDRPVQLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHERDQYMSTTLLRVAKEHHSVVAVVGKGHLSGIKKNWQQPVTLKDLLEMPEQKRVPVVKIFTSLGVAVAGVAIISGIYLACKK Homology
BLAST of Spg000371 vs. NCBI nr
Match: XP_022947978.1 (traB domain-containing protein [Cucurbita moschata]) HSP 1 Score: 574.3 bits (1479), Expect = 7.1e-160 Identity = 317/420 (75.48%), Postives = 330/420 (78.57%), Query Frame = 0
BLAST of Spg000371 vs. NCBI nr
Match: KAG6604847.1 (TraB domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 572.4 bits (1474), Expect = 2.7e-159 Identity = 315/420 (75.00%), Postives = 330/420 (78.57%), Query Frame = 0
BLAST of Spg000371 vs. NCBI nr
Match: XP_038901613.1 (traB domain-containing protein [Benincasa hispida]) HSP 1 Score: 571.2 bits (1471), Expect = 6.0e-159 Identity = 313/420 (74.52%), Postives = 331/420 (78.81%), Query Frame = 0
BLAST of Spg000371 vs. NCBI nr
Match: XP_023533229.1 (traB domain-containing protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 568.9 bits (1465), Expect = 3.0e-158 Identity = 316/423 (74.70%), Postives = 329/423 (77.78%), Query Frame = 0
BLAST of Spg000371 vs. NCBI nr
Match: XP_022971024.1 (traB domain-containing protein [Cucurbita maxima]) HSP 1 Score: 568.2 bits (1463), Expect = 5.1e-158 Identity = 316/420 (75.24%), Postives = 328/420 (78.10%), Query Frame = 0
BLAST of Spg000371 vs. ExPASy Swiss-Prot
Match: Q58760 (Uncharacterized protein MJ1365 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1365 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 8.5e-15 Identity = 67/261 (25.67%), Postives = 119/261 (45.59%), Query Frame = 0
BLAST of Spg000371 vs. ExPASy Swiss-Prot
Match: Q9H4I3 (TraB domain-containing protein OS=Homo sapiens OX=9606 GN=TRABD PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 7.2e-14 Identity = 91/320 (28.44%), Postives = 136/320 (42.50%), Query Frame = 0
BLAST of Spg000371 vs. ExPASy Swiss-Prot
Match: Q99JY4 (TraB domain-containing protein OS=Mus musculus OX=10090 GN=Trabd PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 7.2e-14 Identity = 92/325 (28.31%), Postives = 137/325 (42.15%), Query Frame = 0
BLAST of Spg000371 vs. ExPASy Swiss-Prot
Match: Q58DF3 (TraB domain-containing protein OS=Bos taurus OX=9913 GN=TRABD PE=2 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 6.1e-13 Identity = 90/325 (27.69%), Postives = 136/325 (41.85%), Query Frame = 0
BLAST of Spg000371 vs. ExPASy TrEMBL
Match: A0A6J1G839 (traB domain-containing protein OS=Cucurbita moschata OX=3662 GN=LOC111451697 PE=4 SV=1) HSP 1 Score: 574.3 bits (1479), Expect = 3.5e-160 Identity = 317/420 (75.48%), Postives = 330/420 (78.57%), Query Frame = 0
BLAST of Spg000371 vs. ExPASy TrEMBL
Match: A0A6J1I7E3 (traB domain-containing protein OS=Cucurbita maxima OX=3661 GN=LOC111469817 PE=4 SV=1) HSP 1 Score: 568.2 bits (1463), Expect = 2.5e-158 Identity = 316/420 (75.24%), Postives = 328/420 (78.10%), Query Frame = 0
BLAST of Spg000371 vs. ExPASy TrEMBL
Match: A0A6J1CGW1 (traB domain-containing protein OS=Momordica charantia OX=3673 GN=LOC111011104 PE=4 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 1.4e-156 Identity = 315/420 (75.00%), Postives = 324/420 (77.14%), Query Frame = 0
BLAST of Spg000371 vs. ExPASy TrEMBL
Match: A0A0A0LTA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G422020 PE=4 SV=1) HSP 1 Score: 552.4 bits (1422), Expect = 1.4e-153 Identity = 309/420 (73.57%), Postives = 322/420 (76.67%), Query Frame = 0
BLAST of Spg000371 vs. ExPASy TrEMBL
Match: A0A5A7TLX0 (TraB domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold266G00140 PE=4 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 9.4e-150 Identity = 304/420 (72.38%), Postives = 317/420 (75.48%), Query Frame = 0
BLAST of Spg000371 vs. TAIR 10
Match: AT1G05270.1 (TraB family protein ) HSP 1 Score: 298.5 bits (763), Expect = 7.0e-81 Identity = 182/371 (49.06%), Postives = 236/371 (63.61%), Query Frame = 0
BLAST of Spg000371 vs. TAIR 10
Match: AT2G32340.1 (TraB family protein ) HSP 1 Score: 263.5 bits (672), Expect = 2.5e-70 Identity = 162/347 (46.69%), Postives = 200/347 (57.64%), Query Frame = 0
BLAST of Spg000371 vs. TAIR 10
Match: AT5G52030.2 (TraB family protein ) HSP 1 Score: 57.8 bits (138), Expect = 2.1e-08 Identity = 57/242 (23.55%), Postives = 91/242 (37.60%), Query Frame = 0
BLAST of Spg000371 vs. TAIR 10
Match: AT5G52030.1 (TraB family protein ) HSP 1 Score: 48.1 bits (113), Expect = 1.7e-05 Identity = 31/128 (24.22%), Postives = 57/128 (44.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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