Sgr025780 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr025780
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	AT-rich interactive domain-containing protein 1-like
Location	tig00152936: 2947737 .. 2951976 (-)
RNA-Seq Expression	Sgr025780
Synteny	Sgr025780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGTGATAGCTGATGGTGTGAGTTGGATTACGAAGGTGCTGCAGAGGAGCTTGAAAAAATGCGTATCTGTTAGATTTTGGATTGGCTTTAGAAGATTTTAGTGTTGAAGGTCTGTTTGATAACCTTTTGAAAAGCTTGCTTAGTTGGTTGCTTCTACAAGACATCCACTCGGCTTGTTCCTTACTTTTCGTCAATTTGGCTAAAGACATTGTGAAGGATAAAGGGTGAGGCAGTCTCGAATTGACTGTGTAAGACTTGTGATTGAATTCGAATGTGCTTCTGTTTTGAAGTTATATTACATAAAGTATTTGGATACTTGAGAGACCTTTGAGGAAGTTGTGGGGAAAAGTCACTGTAGTTTGAACTTTGGATGTTACTAAAATTGAAACAAGTCTGCTGAGTTCAGAAAAATCAGTCAGAGATACTTGATCAAAAGAAGGAAGTTAAGTTGCCTTAACATCTGGGTTTGAACTTTGACGTGTGAATTGCAGTGCTTGGATGGTGGTGAGATTAAAAATTCAGTAACTAGGACTTGTGGCGACGGGAATGGATCTAGCAATTGGGAATTGCAGCATGCAAATTCAGCAAAAGGAGTAGTAGCATCTCGTAATGGTCGAGAATTGGCTTTGTACCAAAAGGCAACCGCAGTCATGTTGTCAGATGAGTTCATGAATTGTGTTGGCTTTGAGGAAAATTCAATTTCAGATTTTTCCAAGAGAATATTGAGATGAAGAGTGATAGGATGAAGAGTGGAGACGTATTGCCTCGCAGAGGCAAGAAACTCAAGGATAATGATCATGGCAACCTTGAAAATAAGGATATAAAGATTATGATCCACCTTTCGTTAAGGAAGCGAATTTTGTCCCGGAAAGGAAGCAGGAACTAATGTTGGGATTGCTCAATTGGCTTAAAGGTATTGCAAGAAACCCTTGCGATCCTTCAATATCTTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTGGAAACAAGTTTTGATGGTTCGAGAGGCAATGTTTGTCAAAAGACATGTCGATTCAGTAGTGAACAATCTTTCTTGCAGGTATTTACATAAATGCTTAGTGTTTACATTATATCTTATTCGTATAAAGTTATAGATTCGCATGACTGGGCAATCGAAACTATCTATATCTATCTATACATGTATGAAGTTCTGTGCATTCTCATATCCCATGACATATAAGTTGATTGTGGAATTTTCGGGCTGCTTAGTCTTTCCTGTGTTTTTATGCATTTATTCTCTAGCTTGAAAGGACAATATTGCCATCTGTTATTCTTCATAGTATGCATTTTGATTATATCGCTTACATCTTAAATGATGTTCGTTGTAAACTGCAAAGATCTTCAATGTGAAGGCTATATGAAGCTAAGACATACAGTTTAAGAATTATATCATTAAATTATTGCAATAATTGTTTGATCTTTTTATATTACATATCTGGTTTAGTTGTTAGTGTTTGAGCCCTCTACATCTTAGGAACTTCTGCAGTGTCCTTATGTTTTCCTAATGTTCAATGGCCTTTGTGTGTAAAACTAAAGAATCCAGATAATATGAATATTAGCTTTTAAGATGTGGTTCCTATATTAAGAAGAAAATTAAAACTATTTAAGATGCTAGTTTTCACTTGTCCTGTTCGTCCCGGCCAATAGCTTGAAGCTTTGGCTGCCTTTTTATTCTTGATCTGCTTGTAGTCAGAGAGTGTGTTCTGAAAAATGTTCTTGGAAGTATCAAAAGTGCTTTTAATACTTAGGAACATTTTGAGTTTGCTTGATTGTAGATACATGAATGCTTTAGTACTTAAGGGAAGGGCTTGTAGATACTTTACCAAAAACAGTAAAGCAAGATAATTAAGATTTTATTTAACAGCATAACTTATGTCATTAATTTTATTATAAAATTTGATGTAATCTTAAGATTATTTTCATTAGGAAATGTAAAATAATAGCTACACTGATATTTTACAGATAGTTTTGATTTATAAGCCCATAAAAAAATTGGTAAAAATGTTGCCCAAAGGGAAAACTCATCATTTATTCTAATGGTTAAAATTTACACTAAATAAAATGTAAAACTATAATTTGGAAGTTAAAATTCAAAGAATATTATCAATTTGTAATTTTTAAAATTTTGAATTCTAGCGCTTCATAACTTTGACTCCAATTCTAACCAACAATAATGAAAAAATTTAAGATTCAAAGTATGAAAATGACCTATAGATCTATCGGTTGAAATAAGTTTTTACCAAAATCATAAATGATAATTATATTACGTTAAAAAACACTTTTGGTCCCCGTACTTTCGTTGAAGTAACAATTTAGTCCCTGAACTTTGATAGTAATGATTTAGTCCCCTGTACTTCAAATTTTTAACAATTTAGTCCCTAAAGTAATATTAACGATTTAGTCCCTGTAGTTAAAATTTGTAACGATTTAGTCCCTGTAGTTAAATTGTAACTATTAGTCCCTGTAGTTAAAATTTGTAACGATTTAGTCCTTACTATGAAAAATCATCAAGGGAAATATGATTTTATAATGTAACAATTTATTCTTGTAGTTTATAAGCACATTTGGTCTCTAAGCGGTTATCGATCTACATGTGTAAAAAGCCCAAAAATTAACAAAATTTATTGTAGGACTAAATCTTACAAATTTATAGTATGAGACTAATTGTTACATACAAAGTTCGGGGACTAATTATACAAATTTGAAGATAAAGGACTAAATCGTTACATACTAAAGTTAAGGACTAAATCGTTACTTCAACGAAAGTACAGGGACCAAAAGTAAATTTTAACCTTTATATTATTATACTTTAAAATATTGTGTTTTAATTTTTGAATTTTTAGAAAAATCTATTTTTATTCTTGTTAATTTTTTTCAGTGAACTTTTAACATAGATCTTAGGCTACTTGTTTCTCAACCTAATACTAGATTAGATATATGTGGTTTAAAATATAAATATATTTAGTGTCATATAGGATTTCTATTAAATAAACTATAGAAATTAAACACAAGGACCAAAAACATAACATTTGAAAGCTTACCGATCCAAACAAACAAGTGTAAAAGTTCAGGGATCTAAACCTATTATTTTCTAAAATTTAGAACTTATTCTAGTTTGTTTTTTAATGCGATTAAATTTTTATTGCATTGCATTAAAAAAATGAATTAAATTCATAGGAACATTAAAAGTATAAAAAGAAATTAAAAAAAGTTAACAAGTGTAAACAAGAAAAAATAATTTTTGATAAAAGTTTAAATTAACAAAATTAGGATTTAACCTAACTCTAAATAACATAAATGACCAGATTATTGTTCTTCCATCTACTTATTCCCCTTGCTAGTTAACCACAACATAATTTTCTGTTGCTATATCTTGAAAGTTTTAGTTATTATCTCTACTTTACTAATTTATTATCATGTTTACTTTGTCTTCCCTTTTTGTAGAGAAATCAGAGGATGCATCCTTGCATGTACGACAACGATACAGTTCCGATTTATAATCTTAGGCAGAGATTAAGATTTGACAAGAAGGTTATTTCTCAAGAACCTGTCTCTAAATCAAGTGATTCCTCACCTACAGATTCATCAGATGATTACAAGCCTATTCCTTTGGGGCCAGACTATCAAGCTCAAGTACCAGAATGGAATGGTGTGATATCCGAAAGCGATTTGAAGTGGTTGGGAACTCGAGAATGGCCCTTGAAGAAAGGAAGGAACAGATATCCAGTTGAAAGGGATCCCATTGGAAAGGGAAGACGAGATTCTTGTGGGTGCTCGGACTCTGGTTCGGTTGGTTGTGTCAAATTTCACGTTGCTGAGAAAAGGCGTAGAGTGAAGCTGGAGTTGGGCGCTGCATTCCTCCAATGGAGATTCGATAAGATGGGAGAAGATGTTACATTTGCTTGGACAGCGGGCGATGAGAAAAAGTTCGAGGACATAGTGATGTCGAACCCTCCATCTCTTGGGAAGTGTTTTTGGGATGAGATCATTGAGTTATTTCCTTCTAGGAGCAGGGCAGATCTGGTTAGCTACTACTACAATGTCTTTCTTTTGCGTCGCAGAGGACACCAGAATCGGGTTACGCCCGACGAAATCGATAGTGATGATGAATCAGAATCCGGAGTTGCAACCAATGGATTTAGACACGAAGTGCATAAATCACCTGGCTCCATTTTCTACTCTCCCAAGAAGCCACGGTAA

mRNA sequence

ATGTGGGTGATAGCTGATGGTGTGAGTTGGATTACGAAGGTGCTGCAGAGGAGCTTGAAAAAATGCGTATCTTGCTTGGATGGTGGTGAGATTAAAAATTCAGTAACTAGGACTTGTGGCGACGGGAATGGATCTAGCAATTGGGAATTGCAGCATGCAAATTCAGCAAAAGGAGTAGTAGCATCTCGTAATGGTCGAGAATTGGCTTTGTACCAAAAGGCAACCGCAGTATTGCAAGAAACCCTTGCGATCCTTCAATATCTTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTGGAAACAAGTTTTGATGGTTCGAGAGGCAATGTTTGTCAAAAGACATGTCGATTCAGTAGTGAACAATCTTTCTTGCAGAGAAATCAGAGGATGCATCCTTGCATGTACGACAACGATACAGTTCCGATTTATAATCTTAGGCAGAGATTAAGATTTGACAAGAAGGTTATTTCTCAAGAACCTGTCTCTAAATCAAGTGATTCCTCACCTACAGATTCATCAGATGATTACAAGCCTATTCCTTTGGGGCCAGACTATCAAGCTCAAGTACCAGAATGGAATGGTGTGATATCCGAAAGCGATTTGAAGTGGTTGGGAACTCGAGAATGGCCCTTGAAGAAAGGAAGGAACAGATATCCAGTTGAAAGGGATCCCATTGGAAAGGGAAGACGAGATTCTTGTGGGTGCTCGGACTCTGGTTCGGTTGGTTGTGTCAAATTTCACGTTGCTGAGAAAAGGCGTAGAGTGAAGCTGGAGTTGGGCGCTGCATTCCTCCAATGGAGATTCGATAAGATGGGAGAAGATGTTACATTTGCTTGGACAGCGGGCGATGAGAAAAAGTTCGAGGACATAGTGATGTCGAACCCTCCATCTCTTGGGAAGTGTTTTTGGGATGAGATCATTGAGTTATTTCCTTCTAGGAGCAGGGCAGATCTGGTTAGCTACTACTACAATGTCTTTCTTTTGCGTCGCAGAGGACACCAGAATCGGGTTACGCCCGACGAAATCGATAGTGATGATGAATCAGAATCCGGAGTTGCAACCAATGGATTTAGACACGAAGTGCATAAATCACCTGGCTCCATTTTCTACTCTCCCAAGAAGCCACGGTAA

Coding sequence (CDS)

ATGTGGGTGATAGCTGATGGTGTGAGTTGGATTACGAAGGTGCTGCAGAGGAGCTTGAAAAAATGCGTATCTTGCTTGGATGGTGGTGAGATTAAAAATTCAGTAACTAGGACTTGTGGCGACGGGAATGGATCTAGCAATTGGGAATTGCAGCATGCAAATTCAGCAAAAGGAGTAGTAGCATCTCGTAATGGTCGAGAATTGGCTTTGTACCAAAAGGCAACCGCAGTATTGCAAGAAACCCTTGCGATCCTTCAATATCTTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTGGAAACAAGTTTTGATGGTTCGAGAGGCAATGTTTGTCAAAAGACATGTCGATTCAGTAGTGAACAATCTTTCTTGCAGAGAAATCAGAGGATGCATCCTTGCATGTACGACAACGATACAGTTCCGATTTATAATCTTAGGCAGAGATTAAGATTTGACAAGAAGGTTATTTCTCAAGAACCTGTCTCTAAATCAAGTGATTCCTCACCTACAGATTCATCAGATGATTACAAGCCTATTCCTTTGGGGCCAGACTATCAAGCTCAAGTACCAGAATGGAATGGTGTGATATCCGAAAGCGATTTGAAGTGGTTGGGAACTCGAGAATGGCCCTTGAAGAAAGGAAGGAACAGATATCCAGTTGAAAGGGATCCCATTGGAAAGGGAAGACGAGATTCTTGTGGGTGCTCGGACTCTGGTTCGGTTGGTTGTGTCAAATTTCACGTTGCTGAGAAAAGGCGTAGAGTGAAGCTGGAGTTGGGCGCTGCATTCCTCCAATGGAGATTCGATAAGATGGGAGAAGATGTTACATTTGCTTGGACAGCGGGCGATGAGAAAAAGTTCGAGGACATAGTGATGTCGAACCCTCCATCTCTTGGGAAGTGTTTTTGGGATGAGATCATTGAGTTATTTCCTTCTAGGAGCAGGGCAGATCTGGTTAGCTACTACTACAATGTCTTTCTTTTGCGTCGCAGAGGACACCAGAATCGGGTTACGCCCGACGAAATCGATAGTGATGATGAATCAGAATCCGGAGTTGCAACCAATGGATTTAGACACGAAGTGCATAAATCACCTGGCTCCATTTTCTACTCTCCCAAGAAGCCACGGTAA

Protein sequence

MWVIADGVSWITKVLQRSLKKCVSCLDGGEIKNSVTRTCGDGNGSSNWELQHANSAKGVVASRNGRELALYQKATAVLQETLAILQYLHYQKSQNGNHMEMKRLETSFDGSRGNVCQKTCRFSSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQEPVSKSSDSSPTDSSDDYKPIPLGPDYQAQVPEWNGVISESDLKWLGTREWPLKKGRNRYPVERDPIGKGRRDSCGCSDSGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNPPSLGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATNGFRHEVHKSPGSIFYSPKKPR

Homology

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BLAST of Sgr025780 vs. NCBI nr
Match: XP_022157705.1 (AT-rich interactive domain-containing protein 1-like [Momordica charantia] >XP_022157706.1 AT-rich interactive domain-containing protein 1-like [Momordica charantia])

HSP 1 Score: 482.6 bits (1241), Expect = 3.0e-132
Identity = 229/259 (88.42%), Postives = 240/259 (92.66%), Query Frame = 0


Query: 123 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQEPVSKSSDSSPTDSSDDYK 182
           SSEQS  Q+NQRMHPCMYD+D VPIYNLR+RL F+KKV+ QEPVSKSSDSSPTDSSDDYK
Sbjct: 136 SSEQSSSQKNQRMHPCMYDDDAVPIYNLRKRLSFEKKVVPQEPVSKSSDSSPTDSSDDYK 195

Query: 183 PIPLGPDYQAQVPEWNGVISESDLKWLGTREWPLKKGRNRYPVERDPIGKGRRDSCGCSD 242
            I LGP+YQAQVPEWNGVISESDLKWLGTR+WPLKK RNRY VERDPIG+GRRD CGCSD
Sbjct: 196 HILLGPEYQAQVPEWNGVISESDLKWLGTRDWPLKKERNRYIVERDPIGRGRRDPCGCSD 255

Query: 243 SGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNPPS 302
           SGSVGCVKFHVAEKR R+KLELG AFLQWRFD MGEDVT AWT  DEKKFEDIVMSNPPS
Sbjct: 256 SGSVGCVKFHVAEKRHRLKLELGTAFLQWRFDNMGEDVTSAWTVSDEKKFEDIVMSNPPS 315

Query: 303 LGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATNGF 362
           LGKCFWD+IIE FPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESG+ATNGF
Sbjct: 316 LGKCFWDQIIESFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGLATNGF 375

Query: 363 RHEVHKSPGSIFYSPKKPR 382
            HEVH SPGSIFYSPKKPR
Sbjct: 376 GHEVHNSPGSIFYSPKKPR 394

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BLAST of Sgr025780 vs. NCBI nr
Match: XP_038875899.1 (AT-rich interactive domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 474.6 bits (1220), Expect = 8.3e-130
Identity = 223/259 (86.10%), Postives = 241/259 (93.05%), Query Frame = 0


Query: 123 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQEPVSKSSDSSPTDSSDDYK 182
           SSEQSF+QRNQRMHPCMYD+DTVPIYNLR+RL FDKK +SQEPVSK SDSSPTDSSDDYK
Sbjct: 136 SSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPVSKISDSSPTDSSDDYK 195

Query: 183 PIPLGPDYQAQVPEWNGVISESDLKWLGTREWPLKKGRNRYPVERDPIGKGRRDSCGCSD 242
           P+PLG DYQAQVPEWNGVISESDLKWLGT+EWPLK+GR+RY VERDPIGKGRRDSCGC D
Sbjct: 196 PVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKRGRHRYLVERDPIGKGRRDSCGCLD 255

Query: 243 SGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNPPS 302
           + SVGCVKFHVAEKR R+KLELG  FLQWRFDKMGEDVTFAWT  DEKKFEDIV SNPPS
Sbjct: 256 ANSVGCVKFHVAEKRHRLKLELGNTFLQWRFDKMGEDVTFAWTVEDEKKFEDIVSSNPPS 315

Query: 303 LGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATNGF 362
           LG  +W++IIE FPSRS+ADLVSYYYNVFLLRRRGHQNRVTPDEIDSD+ES+SG+ATNGF
Sbjct: 316 LGISYWEDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDEIDSDEESDSGIATNGF 375

Query: 363 RHEVHKSPGSIFYSPKKPR 382
            +EVH SPGSIFYSPKKPR
Sbjct: 376 GNEVHNSPGSIFYSPKKPR 394

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BLAST of Sgr025780 vs. NCBI nr
Match: XP_022999917.1 (AT-rich interactive domain-containing protein 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 474.2 bits (1219), Expect = 1.1e-129
Identity = 225/261 (86.21%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 123 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQEPVSKSSDSSPTDSSDDYK 182
           SSEQSFLQRNQRMHPCMYDNDTVPIYNLR+RL  DKKV SQEPVSKSSDSSP+DSSD+YK
Sbjct: 136 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPVSKSSDSSPSDSSDEYK 195

Query: 183 PIPLGPDYQAQVPEWNGVISESDLKWLGTREWP--LKKGRNRYPVERDPIGKGRRDSCGC 242
           P+ LGPDYQAQ+PEWNGVIS S+LKWLGT+EWP  LKKG NR PVERDPIGKGRRD CGC
Sbjct: 196 PVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGC 255

Query: 243 SDSGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNP 302
            D+GSVGCVKFHVAEKR R+KLELGAAFLQWRFD+MGEDVTFAW   DEKKFEDIV SNP
Sbjct: 256 LDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNP 315

Query: 303 PSLGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATN 362
           PSLG CFWDEI+E FPSRSR DLVSYYYNVFLLRRRGHQNRVTP++IDSDDESESG+ TN
Sbjct: 316 PSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDESESGITTN 375

Query: 363 GFRHEVHKSPGSIFYSPKKPR 382
           GF HEVH SPGSIFYSPKKPR
Sbjct: 376 GFGHEVHNSPGSIFYSPKKPR 396

[Close]

BLAST of Sgr025780 vs. NCBI nr
Match: XP_022999918.1 (AT-rich interactive domain-containing protein 1-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 474.2 bits (1219), Expect = 1.1e-129
Identity = 225/261 (86.21%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 123 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQEPVSKSSDSSPTDSSDDYK 182
           SSEQSFLQRNQRMHPCMYDNDTVPIYNLR+RL  DKKV SQEPVSKSSDSSP+DSSD+YK
Sbjct: 136 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPVSKSSDSSPSDSSDEYK 195

Query: 183 PIPLGPDYQAQVPEWNGVISESDLKWLGTREWP--LKKGRNRYPVERDPIGKGRRDSCGC 242
           P+ LGPDYQAQ+PEWNGVIS S+LKWLGT+EWP  LKKG NR PVERDPIGKGRRD CGC
Sbjct: 196 PVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGC 255

Query: 243 SDSGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNP 302
            D+GSVGCVKFHVAEKR R+KLELGAAFLQWRFD+MGEDVTFAW   DEKKFEDIV SNP
Sbjct: 256 LDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNP 315

Query: 303 PSLGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATN 362
           PSLG CFWDEI+E FPSRSR DLVSYYYNVFLLRRRGHQNRVTP++IDSDDESESG+ TN
Sbjct: 316 PSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDESESGITTN 375

Query: 363 GFRHEVHKSPGSIFYSPKKPR 382
           GF HEVH SPGSIFYSPKKPR
Sbjct: 376 GFGHEVHNSPGSIFYSPKKPR 396

[Close]

BLAST of Sgr025780 vs. NCBI nr
Match: XP_022999916.1 (AT-rich interactive domain-containing protein 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 474.2 bits (1219), Expect = 1.1e-129
Identity = 225/261 (86.21%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 123 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQEPVSKSSDSSPTDSSDDYK 182
           SSEQSFLQRNQRMHPCMYDNDTVPIYNLR+RL  DKKV SQEPVSKSSDSSP+DSSD+YK
Sbjct: 136 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPVSKSSDSSPSDSSDEYK 195

Query: 183 PIPLGPDYQAQVPEWNGVISESDLKWLGTREWP--LKKGRNRYPVERDPIGKGRRDSCGC 242
           P+ LGPDYQAQ+PEWNGVIS S+LKWLGT+EWP  LKKG NR PVERDPIGKGRRD CGC
Sbjct: 196 PVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGC 255

Query: 243 SDSGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNP 302
            D+GSVGCVKFHVAEKR R+KLELGAAFLQWRFD+MGEDVTFAW   DEKKFEDIV SNP
Sbjct: 256 LDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNP 315

Query: 303 PSLGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATN 362
           PSLG CFWDEI+E FPSRSR DLVSYYYNVFLLRRRGHQNRVTP++IDSDDESESG+ TN
Sbjct: 316 PSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDESESGITTN 375

Query: 363 GFRHEVHKSPGSIFYSPKKPR 382
           GF HEVH SPGSIFYSPKKPR
Sbjct: 376 GFGHEVHNSPGSIFYSPKKPR 396

[Close]

BLAST of Sgr025780 vs. ExPASy Swiss-Prot
Match: Q84JT7 (AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ARID1 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.5e-52
Identity = 114/251 (45.42%), Postives = 151/251 (60.16%), Query Frame = 0


Query: 108 FDGSRGN---VCQKTCRFSSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQE 167
           F  SR N    C+KT          Q+ Q+MHPC+YD+     YNLR+RL ++     + 
Sbjct: 293 FRASRTNNDSACEKT---------WQKVQKMHPCLYDDSAGASYNLRERLSYED--YKRG 352

Query: 168 PVSKSSDSSPTDSSDDYKPIPL-GPDYQAQVPEWNGVISESDLKWLGTREWPLKKGRNR- 227
                SD   +D  D  +P  L G  +QA+VPEW G+  ESD KWLGTR WPL K + + 
Sbjct: 353 KTGNGSDIGSSDEED--RPCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKA 412

Query: 228 -YPVERDPIGKGRRDSCGCSDSGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVT 287
              +ERD IGKGR+D CGC + GS+ CVKFH+  KR ++KLELG AF  W FD MGE   
Sbjct: 413 NLLIERDRIGKGRQDPCGCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGECTL 472

Query: 288 FAWTAGDEKKFEDIVMSNPPSLGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNR 347
             WT  + KK + + MS+PPSL   F  +   + PS+SR  +VSY+YNV LL+ R  Q+R
Sbjct: 473 QYWTDLELKKIKSL-MSSPPSLSPAFIHQAKMILPSKSRGKIVSYFYNVTLLQYRASQSR 529

Query: 348 VTPDEIDSDDE 353
           +TP +IDSD +
Sbjct: 533 ITPHDIDSDTD 529

[Close]

BLAST of Sgr025780 vs. ExPASy Swiss-Prot
Match: Q9LDD4 (AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=ARID2 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.5e-44
Identity = 89/190 (46.84%), Postives = 116/190 (61.05%), Query Frame = 0


Query: 184 IPLGPDYQAQVPEWNGVISESDLKWLGTREWPLKKGRN-RYPVERDPIGKGRRDSCGCSD 243
           I +G  +QAQV EW     +SD KWLGTR WP +        +  D +GKGR DSC C  
Sbjct: 374 IKVGHQHQAQVDEWTESGVDSDSKWLGTRIWPPENSEALDQTLGNDLVGKGRPDSCSCEL 433

Query: 244 SGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNPPS 303
           SG V C + H+AEKR  +K ELG  F  WRF++MGE+V   WT  +EK+F+D+++++P S
Sbjct: 434 SGFVECTRLHIAEKRMELKRELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIADPQS 493

Query: 304 LGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATNGF 363
               FW    + FP + R +LVSYY+NVFL+ RR +QNRVTP  IDSDDE   G     F
Sbjct: 494 ----FWTNAAKNFPKKKREELVSYYFNVFLINRRRYQNRVTPKSIDSDDEGAFGSVGGSF 553

Query: 364 RHEVHKSPGS 373
             +   S GS
Sbjct: 554 GRDAVTSSGS 559

[Close]

BLAST of Sgr025780 vs. ExPASy TrEMBL
Match: A0A6J1DYZ8 (AT-rich interactive domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC111024359 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.5e-132
Identity = 229/259 (88.42%), Postives = 240/259 (92.66%), Query Frame = 0


Query: 123 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQEPVSKSSDSSPTDSSDDYK 182
           SSEQS  Q+NQRMHPCMYD+D VPIYNLR+RL F+KKV+ QEPVSKSSDSSPTDSSDDYK
Sbjct: 136 SSEQSSSQKNQRMHPCMYDDDAVPIYNLRKRLSFEKKVVPQEPVSKSSDSSPTDSSDDYK 195

Query: 183 PIPLGPDYQAQVPEWNGVISESDLKWLGTREWPLKKGRNRYPVERDPIGKGRRDSCGCSD 242
            I LGP+YQAQVPEWNGVISESDLKWLGTR+WPLKK RNRY VERDPIG+GRRD CGCSD
Sbjct: 196 HILLGPEYQAQVPEWNGVISESDLKWLGTRDWPLKKERNRYIVERDPIGRGRRDPCGCSD 255

Query: 243 SGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNPPS 302
           SGSVGCVKFHVAEKR R+KLELG AFLQWRFD MGEDVT AWT  DEKKFEDIVMSNPPS
Sbjct: 256 SGSVGCVKFHVAEKRHRLKLELGTAFLQWRFDNMGEDVTSAWTVSDEKKFEDIVMSNPPS 315

Query: 303 LGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATNGF 362
           LGKCFWD+IIE FPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESG+ATNGF
Sbjct: 316 LGKCFWDQIIESFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGLATNGF 375

Query: 363 RHEVHKSPGSIFYSPKKPR 382
            HEVH SPGSIFYSPKKPR
Sbjct: 376 GHEVHNSPGSIFYSPKKPR 394

[Close]

BLAST of Sgr025780 vs. ExPASy TrEMBL
Match: A0A6J1KC33 (AT-rich interactive domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494251 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 5.2e-130
Identity = 225/261 (86.21%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 123 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQEPVSKSSDSSPTDSSDDYK 182
           SSEQSFLQRNQRMHPCMYDNDTVPIYNLR+RL  DKKV SQEPVSKSSDSSP+DSSD+YK
Sbjct: 136 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPVSKSSDSSPSDSSDEYK 195

Query: 183 PIPLGPDYQAQVPEWNGVISESDLKWLGTREWP--LKKGRNRYPVERDPIGKGRRDSCGC 242
           P+ LGPDYQAQ+PEWNGVIS S+LKWLGT+EWP  LKKG NR PVERDPIGKGRRD CGC
Sbjct: 196 PVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGC 255

Query: 243 SDSGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNP 302
            D+GSVGCVKFHVAEKR R+KLELGAAFLQWRFD+MGEDVTFAW   DEKKFEDIV SNP
Sbjct: 256 LDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNP 315

Query: 303 PSLGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATN 362
           PSLG CFWDEI+E FPSRSR DLVSYYYNVFLLRRRGHQNRVTP++IDSDDESESG+ TN
Sbjct: 316 PSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDESESGITTN 375

Query: 363 GFRHEVHKSPGSIFYSPKKPR 382
           GF HEVH SPGSIFYSPKKPR
Sbjct: 376 GFGHEVHNSPGSIFYSPKKPR 396

[Close]

BLAST of Sgr025780 vs. ExPASy TrEMBL
Match: A0A6J1KEF5 (AT-rich interactive domain-containing protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494251 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 5.2e-130
Identity = 225/261 (86.21%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 123 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQEPVSKSSDSSPTDSSDDYK 182
           SSEQSFLQRNQRMHPCMYDNDTVPIYNLR+RL  DKKV SQEPVSKSSDSSP+DSSD+YK
Sbjct: 136 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPVSKSSDSSPSDSSDEYK 195

Query: 183 PIPLGPDYQAQVPEWNGVISESDLKWLGTREWP--LKKGRNRYPVERDPIGKGRRDSCGC 242
           P+ LGPDYQAQ+PEWNGVIS S+LKWLGT+EWP  LKKG NR PVERDPIGKGRRD CGC
Sbjct: 196 PVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGC 255

Query: 243 SDSGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNP 302
            D+GSVGCVKFHVAEKR R+KLELGAAFLQWRFD+MGEDVTFAW   DEKKFEDIV SNP
Sbjct: 256 LDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNP 315

Query: 303 PSLGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATN 362
           PSLG CFWDEI+E FPSRSR DLVSYYYNVFLLRRRGHQNRVTP++IDSDDESESG+ TN
Sbjct: 316 PSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDESESGITTN 375

Query: 363 GFRHEVHKSPGSIFYSPKKPR 382
           GF HEVH SPGSIFYSPKKPR
Sbjct: 376 GFGHEVHNSPGSIFYSPKKPR 396

[Close]

BLAST of Sgr025780 vs. ExPASy TrEMBL
Match: A0A6J1KL28 (AT-rich interactive domain-containing protein 1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111494251 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 5.2e-130
Identity = 225/261 (86.21%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 123 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQEPVSKSSDSSPTDSSDDYK 182
           SSEQSFLQRNQRMHPCMYDNDTVPIYNLR+RL  DKKV SQEPVSKSSDSSP+DSSD+YK
Sbjct: 136 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPVSKSSDSSPSDSSDEYK 195

Query: 183 PIPLGPDYQAQVPEWNGVISESDLKWLGTREWP--LKKGRNRYPVERDPIGKGRRDSCGC 242
           P+ LGPDYQAQ+PEWNGVIS S+LKWLGT+EWP  LKKG NR PVERDPIGKGRRD CGC
Sbjct: 196 PVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGC 255

Query: 243 SDSGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNP 302
            D+GSVGCVKFHVAEKR R+KLELGAAFLQWRFD+MGEDVTFAW   DEKKFEDIV SNP
Sbjct: 256 LDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNP 315

Query: 303 PSLGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATN 362
           PSLG CFWDEI+E FPSRSR DLVSYYYNVFLLRRRGHQNRVTP++IDSDDESESG+ TN
Sbjct: 316 PSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDESESGITTN 375

Query: 363 GFRHEVHKSPGSIFYSPKKPR 382
           GF HEVH SPGSIFYSPKKPR
Sbjct: 376 GFGHEVHNSPGSIFYSPKKPR 396

[Close]

BLAST of Sgr025780 vs. ExPASy TrEMBL
Match: A0A6J1HI37 (AT-rich interactive domain-containing protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464543 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 4.9e-128
Identity = 222/261 (85.06%), Postives = 237/261 (90.80%), Query Frame = 0


Query: 123 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQEPVSKSSDSSPTDSSDDYK 182
           SSEQSFLQRNQRMHPCMYDNDTVPIYNLR+RL  D KV SQEPVSKSSDSSP+DSSD+YK
Sbjct: 136 SSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDNKVQSQEPVSKSSDSSPSDSSDEYK 195

Query: 183 PIPLGPDYQAQVPEWNGVISESDLKWLGTREWP--LKKGRNRYPVERDPIGKGRRDSCGC 242
           P+ LGPDYQAQ+PEWNGVIS S+LKWLGT+EWP  LKKG NR PVERDPIGKGRRD CGC
Sbjct: 196 PVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGC 255

Query: 243 SDSGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNP 302
            D+GSVGCVKFHVAEKR R+KLELGAAFLQWRFD+MGEDVTFAW   DEKKFEDIV SNP
Sbjct: 256 LDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNP 315

Query: 303 PSLGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATN 362
           PSLG CFWDEI+E FPSRSR DLVSYYYNVFLLRRRGHQNRVTP++IDSDDESES + TN
Sbjct: 316 PSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDESESRITTN 375

Query: 363 GFRHEVHKSPGSIFYSPKKPR 382
           GF H+VH SPGSIFYSPKKPR
Sbjct: 376 GFGHKVHNSPGSIFYSPKKPR 396

[Close]

BLAST of Sgr025780 vs. TAIR 10
Match: AT2G46040.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein )

HSP 1 Score: 206.5 bits (524), Expect = 3.9e-53
Identity = 114/251 (45.42%), Postives = 151/251 (60.16%), Query Frame = 0


Query: 108 FDGSRGN---VCQKTCRFSSEQSFLQRNQRMHPCMYDNDTVPIYNLRQRLRFDKKVISQE 167
           F  SR N    C+KT          Q+ Q+MHPC+YD+     YNLR+RL ++     + 
Sbjct: 293 FRASRTNNDSACEKT---------WQKVQKMHPCLYDDSAGASYNLRERLSYED--YKRG 352

Query: 168 PVSKSSDSSPTDSSDDYKPIPL-GPDYQAQVPEWNGVISESDLKWLGTREWPLKKGRNR- 227
                SD   +D  D  +P  L G  +QA+VPEW G+  ESD KWLGTR WPL K + + 
Sbjct: 353 KTGNGSDIGSSDEED--RPCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKA 412

Query: 228 -YPVERDPIGKGRRDSCGCSDSGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVT 287
              +ERD IGKGR+D CGC + GS+ CVKFH+  KR ++KLELG AF  W FD MGE   
Sbjct: 413 NLLIERDRIGKGRQDPCGCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGECTL 472

Query: 288 FAWTAGDEKKFEDIVMSNPPSLGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNR 347
             WT  + KK + + MS+PPSL   F  +   + PS+SR  +VSY+YNV LL+ R  Q+R
Sbjct: 473 QYWTDLELKKIKSL-MSSPPSLSPAFIHQAKMILPSKSRGKIVSYFYNVTLLQYRASQSR 529

Query: 348 VTPDEIDSDDE 353
           +TP +IDSD +
Sbjct: 533 ITPHDIDSDTD 529

[Close]

BLAST of Sgr025780 vs. TAIR 10
Match: AT4G11400.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein )

HSP 1 Score: 179.9 bits (455), Expect = 3.9e-45
Identity = 89/190 (46.84%), Postives = 116/190 (61.05%), Query Frame = 0


Query: 184 IPLGPDYQAQVPEWNGVISESDLKWLGTREWPLKKGRN-RYPVERDPIGKGRRDSCGCSD 243
           I +G  +QAQV EW     +SD KWLGTR WP +        +  D +GKGR DSC C  
Sbjct: 374 IKVGHQHQAQVDEWTESGVDSDSKWLGTRIWPPENSEALDQTLGNDLVGKGRPDSCSCEL 433

Query: 244 SGSVGCVKFHVAEKRRRVKLELGAAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNPPS 303
           SG V C + H+AEKR  +K ELG  F  WRF++MGE+V   WT  +EK+F+D+++++P S
Sbjct: 434 SGFVECTRLHIAEKRMELKRELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIADPQS 493

Query: 304 LGKCFWDEIIELFPSRSRADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDESESGVATNGF 363
               FW    + FP + R +LVSYY+NVFL+ RR +QNRVTP  IDSDDE   G     F
Sbjct: 494 ----FWTNAAKNFPKKKREELVSYYFNVFLINRRRYQNRVTPKSIDSDDEGAFGSVGGSF 553

Query: 364 RHEVHKSPGS 373
             +   S GS
Sbjct: 554 GRDAVTSSGS 559

[Close]

BLAST of Sgr025780 vs. TAIR 10
Match: AT5G04110.1 (DNA GYRASE B3 )

HSP 1 Score: 141.0 bits (354), Expect = 2.0e-33
Identity = 76/201 (37.81%), Postives = 111/201 (55.22%), Query Frame = 0


Query: 167 SKSSDSSPTDSSDDYKP-IPLGPDYQAQVPEWNGVISE----------SDLKWLGTREWP 226
           +K+S    T  S+  +P IP+GP +QA++P W     +          + L+WLGT  WP
Sbjct: 343 NKTSKDVITHGSNKTRPAIPIGPRFQAEIPVWIAPTKKGKFYGSPGDSNTLRWLGTGVWP 402

Query: 227 ---LKKGRNRYPVERDPIGKGRRDSCGCSDSGSVGCVKFHVAEKRRRVKLELGAAFLQWR 286
              LKK      V    +G+GR DSC C+   S  C+K H  E +  ++ E+  AF  W 
Sbjct: 403 TYSLKK-----TVHSKKVGEGRSDSCSCASPRSTNCIKRHKKEAQELLEKEINRAFSTWE 462

Query: 287 FDKMGEDVTF-AWTAGDEKKFEDIVMSNPPSLGKCFWDEIIELFPSRSRADLVSYYYNVF 346
           FD+MGE++   +WTA +E++FE +V  NP S    FW+     FP +S+ DL+SYYYNVF
Sbjct: 463 FDQMGEEIVLKSWTAKEERRFEALVKKNPLSSSDGFWEFASNAFPQKSKKDLLSYYYNVF 522

Query: 347 LLRRRGHQNRVTPDEIDSDDE 353
           L++R         + IDSDD+
Sbjct: 523 LIKRMRLLKSSAANNIDSDDD 538

[Close]

BLAST of Sgr025780 vs. TAIR 10
Match: AT2G03470.1 (ELM2 domain-containing protein )

HSP 1 Score: 117.1 bits (292), Expect = 3.1e-26
Identity = 73/213 (34.27%), Postives = 110/213 (51.64%), Query Frame = 0


Query: 162 SQEPVSKSSDSSPTDSSDDY------------------KPIPLGPDYQAQVPEW--NGVI 221
           SQ  V+  SD S   S  D+                  K + +G ++QA +PE+    ++
Sbjct: 83  SQSGVTTQSDLSHQSSGSDFTWKPVEDVYTCLMNQPPRKQVLVGSNHQADIPEFVKEEIL 142

Query: 222 SESDLKWLGTREWPLKKGRNRYPVERDPIGKGR-RDSCGCSDSGSVGCVKFHVAEKRRRV 281
            +S+ +     E  L +       + D  G G+ R  C C D GS+ CV+ H+ E R  +
Sbjct: 143 DQSEARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKECLCLDKGSIRCVRRHIIEARESL 202

Query: 282 KLELG-AAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNPPSLGKCFWDEIIELFPSRS 341
              +G   F++    +MGE+V   WT  +E  F  +V SNP S G+ FW ++   FPSR+
Sbjct: 203 VETIGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSRT 262

Query: 342 RADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDE 353
             +LVSYY+NVF+LRRRG QNR    ++DSDD+
Sbjct: 263 MKELVSYYFNVFILRRRGIQNRFKALDVDSDDD 295

[Close]

BLAST of Sgr025780 vs. TAIR 10
Match: AT2G03470.2 (ELM2 domain-containing protein )

HSP 1 Score: 117.1 bits (292), Expect = 3.1e-26
Identity = 73/213 (34.27%), Postives = 110/213 (51.64%), Query Frame = 0


Query: 162 SQEPVSKSSDSSPTDSSDDY------------------KPIPLGPDYQAQVPEW--NGVI 221
           SQ  V+  SD S   S  D+                  K + +G ++QA +PE+    ++
Sbjct: 82  SQSGVTTQSDLSHQSSGSDFTWKPVEDVYTCLMNQPPRKQVLVGSNHQADIPEFVKEEIL 141

Query: 222 SESDLKWLGTREWPLKKGRNRYPVERDPIGKGR-RDSCGCSDSGSVGCVKFHVAEKRRRV 281
            +S+ +     E  L +       + D  G G+ R  C C D GS+ CV+ H+ E R  +
Sbjct: 142 DQSEARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKECLCLDKGSIRCVRRHIIEARESL 201

Query: 282 KLELG-AAFLQWRFDKMGEDVTFAWTAGDEKKFEDIVMSNPPSLGKCFWDEIIELFPSRS 341
              +G   F++    +MGE+V   WT  +E  F  +V SNP S G+ FW ++   FPSR+
Sbjct: 202 VETIGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSRT 261

Query: 342 RADLVSYYYNVFLLRRRGHQNRVTPDEIDSDDE 353
             +LVSYY+NVF+LRRRG QNR    ++DSDD+
Sbjct: 262 MKELVSYYFNVFILRRRGIQNRFKALDVDSDDD 294

The following BLAST results are available for this feature:

BLAST of Sgr025780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157705.1	3.0e-132	88.42	AT-rich interactive domain-containing protein 1-like [Momordica charantia] >XP_0...	[more]
XP_038875899.1	8.3e-130	86.10	AT-rich interactive domain-containing protein 1-like [Benincasa hispida]	[more]
XP_022999917.1	1.1e-129	86.21	AT-rich interactive domain-containing protein 1-like isoform X2 [Cucurbita maxim...	[more]
XP_022999918.1	1.1e-129	86.21	AT-rich interactive domain-containing protein 1-like isoform X3 [Cucurbita maxim...	[more]
XP_022999916.1	1.1e-129	86.21	AT-rich interactive domain-containing protein 1-like isoform X1 [Cucurbita maxim...	[more]

BLAST of Sgr025780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JT7	5.5e-52	45.42	AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LDD4	5.5e-44	46.84	AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sgr025780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DYZ8	1.5e-132	88.42	AT-rich interactive domain-containing protein 1-like OS=Momordica charantia OX=3...	[more]
A0A6J1KC33	5.2e-130	86.21	AT-rich interactive domain-containing protein 1-like isoform X2 OS=Cucurbita max...	[more]
A0A6J1KEF5	5.2e-130	86.21	AT-rich interactive domain-containing protein 1-like isoform X1 OS=Cucurbita max...	[more]
A0A6J1KL28	5.2e-130	86.21	AT-rich interactive domain-containing protein 1-like isoform X3 OS=Cucurbita max...	[more]
A0A6J1HI37	4.9e-128	85.06	AT-rich interactive domain-containing protein 1-like isoform X1 OS=Cucurbita mos...	[more]

BLAST of Sgr025780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46040.1	3.9e-53	45.42	ARID/BRIGHT DNA-binding domain;ELM2 domain protein	[more]
AT4G11400.1	3.9e-45	46.84	ARID/BRIGHT DNA-binding domain;ELM2 domain protein	[more]
AT5G04110.1	2.0e-33	37.81	DNA GYRASE B3	[more]
AT2G03470.1	3.1e-26	34.27	ELM2 domain-containing protein	[more]
AT2G03470.2	3.1e-26	34.27	ELM2 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000949	ELM2 domain	SMART	SM01189	ELM2_2	coord: 184..235 e-value: 0.0018 score: 27.6
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 283..330 e-value: 1.9E-5 score: 24.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..381
None	No IPR available	PANTHER	PTHR46410	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2	coord: 118..380
None	No IPR available	PANTHER	PTHR46410:SF1	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1	coord: 118..380
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 283..331 e-value: 7.34103E-5 score: 37.9402

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr025780.1	Sgr025780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus