Sgr025204 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr025204
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Transcription factor GTE9 isoform X4
Location	tig00003412: 2145552 .. 2146280 (+)
RNA-Seq Expression	Sgr025204
Synteny	Sgr025204

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCTCACTCCTCTCTTCCATATATATTTCCCACTTTCAGTGGAAAGAGATCGATTGAGCATTCGAAAATTCTGGAGAGTGAGATCAGTCGAGTGATCATTAGCGATTTCAGAGCGTTGAAGATGAAGACAGCAATGGCGGAACATCCTTCGTATCTGAGAGGTCTTGTGTGCGAAAGGTTGGCCAAGGCACCAAAGATATTGAACGCGAGTTCTCCTACAACGAAACCTCGCCGAGTTGGTGGTGGTTTGGCGCCGAAGGCGACGATAGCGAAGGCGAAGGTGAGTTCTTCCAAAACGATGAAACATGATGGTTTGGCAGCGAAGGCGAAGGTAAGTTCTCCCAGAACGATGAAACCTTGCCTAGTTGATGGTGATTTGGCACCGGCGGCGGCCACGATTGCACCACAGCAGACTCCGCCGTCACCGGAGAGAGCCGCTCGAGTAACAATGCTGAAAAGTAGGTACGCCGATACGATCTTGAAAGCACAGCGGCAGTTGTTCGGCAGTGACGAGTGTGTTGTGAAGCCGAAGCCACCTACGACAGAAGAACTTAGACGAGCAGCGCGAGAACTCTTGGAGAAGGTGGAGCAGAATGTTCAGGTGGAGGATAGCCATAAATCTGTGAAGGACTTGGAACGGCTTTGCGGTCGTCCCATACCCTACGTTGGTGGATTCAGGTGCAAGATGAATCAAATCGGTTTATTTCTGAAGACAATATCGTAG

mRNA sequence

ATGAAATCTCACTCCTCTCTTCCATATATATTTCCCACTTTCAGTGGAAAGAGATCGATTGAGCATTCGAAAATTCTGGAGAGTGAGATCAGTCGAGTGATCATTAGCGATTTCAGAGCGTTGAAGATGAAGACAGCAATGGCGGAACATCCTTCGTATCTGAGAGGTCTTGTGTGCGAAAGGTTGGCCAAGGCACCAAAGATATTGAACGCGAGTTCTCCTACAACGAAACCTCGCCGAGTTGGTGGTGGTTTGGCGCCGAAGGCGACGATAGCGAAGGCGAAGGTGAGTTCTTCCAAAACGATGAAACATGATGGTTTGGCAGCGAAGGCGAAGGTAAGTTCTCCCAGAACGATGAAACCTTGCCTAGTTGATGGTGATTTGGCACCGGCGGCGGCCACGATTGCACCACAGCAGACTCCGCCGTCACCGGAGAGAGCCGCTCGAGTAACAATGCTGAAAAGTAGGTACGCCGATACGATCTTGAAAGCACAGCGGCAGTTGTTCGGCAGTGACGAGTGTGTTGTGAAGCCGAAGCCACCTACGACAGAAGAACTTAGACGAGCAGCGCGAGAACTCTTGGAGAAGGTGGAGCAGAATGTTCAGGTGGAGGATAGCCATAAATCTGTGAAGGACTTGGAACGGCTTTGCGGTCGTCCCATACCCTACGTTGGTGGATTCAGGTGCAAGATGAATCAAATCGGTTTATTTCTGAAGACAATATCGTAG

Coding sequence (CDS)

ATGAAATCTCACTCCTCTCTTCCATATATATTTCCCACTTTCAGTGGAAAGAGATCGATTGAGCATTCGAAAATTCTGGAGAGTGAGATCAGTCGAGTGATCATTAGCGATTTCAGAGCGTTGAAGATGAAGACAGCAATGGCGGAACATCCTTCGTATCTGAGAGGTCTTGTGTGCGAAAGGTTGGCCAAGGCACCAAAGATATTGAACGCGAGTTCTCCTACAACGAAACCTCGCCGAGTTGGTGGTGGTTTGGCGCCGAAGGCGACGATAGCGAAGGCGAAGGTGAGTTCTTCCAAAACGATGAAACATGATGGTTTGGCAGCGAAGGCGAAGGTAAGTTCTCCCAGAACGATGAAACCTTGCCTAGTTGATGGTGATTTGGCACCGGCGGCGGCCACGATTGCACCACAGCAGACTCCGCCGTCACCGGAGAGAGCCGCTCGAGTAACAATGCTGAAAAGTAGGTACGCCGATACGATCTTGAAAGCACAGCGGCAGTTGTTCGGCAGTGACGAGTGTGTTGTGAAGCCGAAGCCACCTACGACAGAAGAACTTAGACGAGCAGCGCGAGAACTCTTGGAGAAGGTGGAGCAGAATGTTCAGGTGGAGGATAGCCATAAATCTGTGAAGGACTTGGAACGGCTTTGCGGTCGTCCCATACCCTACGTTGGTGGATTCAGGTGCAAGATGAATCAAATCGGTTTATTTCTGAAGACAATATCGTAG

Protein sequence

MKSHSSLPYIFPTFSGKRSIEHSKILESEISRVIISDFRALKMKTAMAEHPSYLRGLVCERLAKAPKILNASSPTTKPRRVGGGLAPKATIAKAKVSSSKTMKHDGLAAKAKVSSPRTMKPCLVDGDLAPAAATIAPQQTPPSPERAARVTMLKSRYADTILKAQRQLFGSDECVVKPKPPTTEELRRAARELLEKVEQNVQVEDSHKSVKDLERLCGRPIPYVGGFRCKMNQIGLFLKTIS

Homology

[Close]

BLAST of Sgr025204 vs. NCBI nr
Match: KAA0061663.1 (transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa] >TYK21138.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa])

HSP 1 Score: 87.0 bits (214), Expect = 2.4e-13
Identity = 68/190 (35.79%), Postives = 87/190 (45.79%), Query Frame = 0


Query: 110 KAKVSS---PRTMKPCLVDGDLAPAAATIAPQQTPPSPERAARVTMLKSRYADTILKAQR 169
           KAKV++   P+  KP        P   T        +     RV+MLK R+A TILKAQ+
Sbjct: 13  KAKVTTIVKPKKAKP-------TPTMGTTPLTAIRYNDNHNNRVSMLKRRFAGTILKAQQ 72

Query: 170 QLFGSDEC---VVKPKPPT----------------------------------------- 229
           QL   +     V K +PPT                                         
Sbjct: 73  QLSERERIMCNVEKKQPPTLASTPTTMMDERREATREALWRKKEPTTTPTKNSNEELRKV 132

Query: 230 -------------TEELRRAARELLEKVEQNVQVEDSHKSVKDLERLCGRPIPYVGGFRC 240
                        TEE+R+AAR  LE++E++V +EDSHKSVKDLERLCG PIPYVGGF+ 
Sbjct: 133 VQRAFSPTPIPSSTEEIRKAARRALEELERSVDIEDSHKSVKDLERLCGWPIPYVGGFKN 192

[Close]

BLAST of Sgr025204 vs. NCBI nr
Match: KAG6571342.1 (hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 81.6 bits (200), Expect = 9.9e-12
Identity = 66/175 (37.71%), Postives = 88/175 (50.29%), Query Frame = 0


Query: 99  SKTMKHDGLAAKAKVSSPRTMKPCLVDGDLAPAAATIAPQQTPPSPE-RAARVTMLKSRY 158
           S +++   L +KAK  S  ++ P  +      A  TI P+ TP S      R  +LK ++
Sbjct: 8   SLSVRASSLKSKAKKPS-LSLPPTSLTKAKTLAPTTIVPRPTPSSSSGEDNRAKILKKKF 67

Query: 159 ADTILKAQRQLF-----------------GS----DECVVKPKPPT------------TE 218
           A TI KAQR L                  GS    D  VV P  P+             E
Sbjct: 68  AGTIWKAQRHLSKNRKKVRSEKRREADGKGSEAVDDRRVVPPLAPSLEDDEITMLKVRRE 127

Query: 219 ELRRAARELLEKVEQNVQVEDSHKSVKDLERLCGRPIPYVGGFRCKMNQIGLFLK 240
           E+R AAR  LE+VE+ V V+DSH S+++ ERLCG PIPYVGGF  +M+  GL+LK
Sbjct: 128 EMRAAARRDLEEVERRVVVDDSHASLREYERLCGFPIPYVGGFLNRMHYYGLYLK 181

[Close]

BLAST of Sgr025204 vs. NCBI nr
Match: KAF1888001.1 (hypothetical protein Lal_00024012 [Lupinus albus])

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-04
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 143 SPERAARVTMLKSRYADTILKAQR-------------QLFGSDECVVKPKPPTTE----- 202
           SP++A R  MLKSR+ADTILKAQ+             ++   +   ++ +  + E     
Sbjct: 413 SPKKALRAAMLKSRFADTILKAQQKTLLDHGDKSGPLKMRHEERARIEAQIKSAEVAARI 472

Query: 203 ELRRAARELLEKVEQNVQVEDSHKSVKDLERLCGRPIPY-----VGGFR--------CKM 240
           + R AAR  LEK+E++V+VE++ + +K+LE LCG    +       GFR          +
Sbjct: 473 KAREAARVALEKMERSVEVENNSQCLKELEMLCGCVQSFQAPNNKNGFRVAIETSDKSPL 532

[Close]

BLAST of Sgr025204 vs. NCBI nr
Match: KAE9601213.1 (putative chromatin remodeler Bromodomain family [Lupinus albus])

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-04
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 143 SPERAARVTMLKSRYADTILKAQR-------------QLFGSDECVVKPKPPTTE----- 202
           SP++A R  MLKSR+ADTILKAQ+             ++   +   ++ +  + E     
Sbjct: 391 SPKKALRAAMLKSRFADTILKAQQKTLLDHGDKSGPLKMRHEERARIEAQIKSAEVAARI 450

Query: 203 ELRRAARELLEKVEQNVQVEDSHKSVKDLERLCGRPIPY-----VGGFR--------CKM 240
           + R AAR  LEK+E++V+VE++ + +K+LE LCG    +       GFR          +
Sbjct: 451 KAREAARVALEKMERSVEVENNSQCLKELEMLCGCVQSFQAPNNKNGFRVAIETSDKSPL 510

[Close]

BLAST of Sgr025204 vs. NCBI nr
Match: XP_034208193.1 (bromodomain-containing protein 2-like [Prunus dulcis] >VVA36361.1 PREDICTED: mRNAion factor [Prunus dulcis])

HSP 1 Score: 55.8 bits (133), Expect = 5.8e-04
Identity = 45/136 (33.09%), Postives = 66/136 (48.53%), Query Frame = 0


Query: 84  GLAPKATIAKAKVSSSKTMKHDGLAAKAKVSSPRTMKPCLVDGDLAPAAATIAPQQTPP- 143
           GL+PK    K+   S   ++  GL                 D DLA        Q +   
Sbjct: 220 GLSPKLKQGKSSSPSRVNLQSQGLGVSHSTK----------DDDLATLVQHAMDQASENL 279

Query: 144 SPERAARVTMLKSRYADTILKAQRQLFGSDECVVKPKPPTTEELRRAARELLEKVEQNVQ 203
           SP RA+R+ +LK +++DTILKA + L G  +   + K     + R+ AR  +  VE++VQ
Sbjct: 280 SPCRASRIQLLKLQFSDTILKANKTLKGLPDSPRRKKLMQRMKQRKLARRAILNVEKSVQ 339

Query: 204 VEDSHKSVKDLERLCG 219
            EDS + +K LE LCG
Sbjct: 340 FEDSLQDLKQLEMLCG 345

[Close]

BLAST of Sgr025204 vs. ExPASy TrEMBL
Match: A0A0A0KGL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421730 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.6e-15
Identity = 63/159 (39.62%), Postives = 75/159 (47.17%), Query Frame = 0


Query: 149 RVTMLKSRYADTILKAQRQLFGSDE--CVVKPKPPT------------------------ 208
           RV+MLKSR+A TILKAQ+QL  S    C V+ KPPT                        
Sbjct: 54  RVSMLKSRFASTILKAQQQLSESKRKVCNVEKKPPTPALTPMEERREATREASWRNKKPT 113

Query: 209 ------------------------------------------TEELRRAARELLEKVEQN 240
                                                     TEE+RRAAR+ LE +E++
Sbjct: 114 ATATATATTTPTTNSNEEPTREVVQRALWRKMKLPPTPILTSTEEIRRAARQALEDLERS 173

[Close]

BLAST of Sgr025204 vs. ExPASy TrEMBL
Match: A0A5D3DC97 (Transcription factor GTE9 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00060 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-13
Identity = 68/190 (35.79%), Postives = 87/190 (45.79%), Query Frame = 0


Query: 110 KAKVSS---PRTMKPCLVDGDLAPAAATIAPQQTPPSPERAARVTMLKSRYADTILKAQR 169
           KAKV++   P+  KP        P   T        +     RV+MLK R+A TILKAQ+
Sbjct: 13  KAKVTTIVKPKKAKP-------TPTMGTTPLTAIRYNDNHNNRVSMLKRRFAGTILKAQQ 72

Query: 170 QLFGSDEC---VVKPKPPT----------------------------------------- 229
           QL   +     V K +PPT                                         
Sbjct: 73  QLSERERIMCNVEKKQPPTLASTPTTMMDERREATREALWRKKEPTTTPTKNSNEELRKV 132

Query: 230 -------------TEELRRAARELLEKVEQNVQVEDSHKSVKDLERLCGRPIPYVGGFRC 240
                        TEE+R+AAR  LE++E++V +EDSHKSVKDLERLCG PIPYVGGF+ 
Sbjct: 133 VQRAFSPTPIPSSTEEIRKAARRALEELERSVDIEDSHKSVKDLERLCGWPIPYVGGFKN 192

[Close]

BLAST of Sgr025204 vs. ExPASy TrEMBL
Match: A0A6A5NJM1 (Bromo domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00024012 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.7e-05
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 143 SPERAARVTMLKSRYADTILKAQR-------------QLFGSDECVVKPKPPTTE----- 202
           SP++A R  MLKSR+ADTILKAQ+             ++   +   ++ +  + E     
Sbjct: 413 SPKKALRAAMLKSRFADTILKAQQKTLLDHGDKSGPLKMRHEERARIEAQIKSAEVAARI 472

Query: 203 ELRRAARELLEKVEQNVQVEDSHKSVKDLERLCGRPIPY-----VGGFR--------CKM 240
           + R AAR  LEK+E++V+VE++ + +K+LE LCG    +       GFR          +
Sbjct: 473 KAREAARVALEKMERSVEVENNSQCLKELEMLCGCVQSFQAPNNKNGFRVAIETSDKSPL 532

[Close]

BLAST of Sgr025204 vs. ExPASy TrEMBL
Match: A0A6A4PI18 (Putative chromatin remodeler Bromodomain family OS=Lupinus albus OX=3870 GN=Lalb_Chr13g0295421 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.7e-05
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 143 SPERAARVTMLKSRYADTILKAQR-------------QLFGSDECVVKPKPPTTE----- 202
           SP++A R  MLKSR+ADTILKAQ+             ++   +   ++ +  + E     
Sbjct: 391 SPKKALRAAMLKSRFADTILKAQQKTLLDHGDKSGPLKMRHEERARIEAQIKSAEVAARI 450

Query: 203 ELRRAARELLEKVEQNVQVEDSHKSVKDLERLCGRPIPY-----VGGFR--------CKM 240
           + R AAR  LEK+E++V+VE++ + +K+LE LCG    +       GFR          +
Sbjct: 451 KAREAARVALEKMERSVEVENNSQCLKELEMLCGCVQSFQAPNNKNGFRVAIETSDKSPL 510

[Close]

BLAST of Sgr025204 vs. ExPASy TrEMBL
Match: A0A5E4G988 (PREDICTED: mRNAion factor OS=Prunus dulcis OX=3755 GN=ALMOND_2B004363 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.8e-04
Identity = 45/136 (33.09%), Postives = 66/136 (48.53%), Query Frame = 0


Query: 84  GLAPKATIAKAKVSSSKTMKHDGLAAKAKVSSPRTMKPCLVDGDLAPAAATIAPQQTPP- 143
           GL+PK    K+   S   ++  GL                 D DLA        Q +   
Sbjct: 220 GLSPKLKQGKSSSPSRVNLQSQGLGVSHSTK----------DDDLATLVQHAMDQASENL 279

Query: 144 SPERAARVTMLKSRYADTILKAQRQLFGSDECVVKPKPPTTEELRRAARELLEKVEQNVQ 203
           SP RA+R+ +LK +++DTILKA + L G  +   + K     + R+ AR  +  VE++VQ
Sbjct: 280 SPCRASRIQLLKLQFSDTILKANKTLKGLPDSPRRKKLMQRMKQRKLARRAILNVEKSVQ 339

Query: 204 VEDSHKSVKDLERLCG 219
            EDS + +K LE LCG
Sbjct: 340 FEDSLQDLKQLEMLCG 345

The following BLAST results are available for this feature:

BLAST of Sgr025204 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061663.1	2.4e-13	35.79	transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa] >TYK21138.1 tran...	[more]
KAG6571342.1	9.9e-12	37.71	hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAF1888001.1	1.2e-04	33.59	hypothetical protein Lal_00024012 [Lupinus albus]	[more]
KAE9601213.1	1.2e-04	33.59	putative chromatin remodeler Bromodomain family [Lupinus albus]	[more]
XP_034208193.1	5.8e-04	33.09	bromodomain-containing protein 2-like [Prunus dulcis] >VVA36361.1 PREDICTED: mRN...	[more]

BLAST of Sgr025204 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr025204 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGL2	4.6e-15	39.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421730 PE=4 SV=1	[more]
A0A5D3DC97	1.1e-13	35.79	Transcription factor GTE9 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6A5NJM1	5.7e-05	33.59	Bromo domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00024012 PE=4 SV...	[more]
A0A6A4PI18	5.7e-05	33.59	Putative chromatin remodeler Bromodomain family OS=Lupinus albus OX=3870 GN=Lalb...	[more]
A0A5E4G988	2.8e-04	33.09	PREDICTED: mRNAion factor OS=Prunus dulcis OX=3755 GN=ALMOND_2B004363 PE=4 SV=1	[more]

BLAST of Sgr025204 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..114
None	No IPR available	PANTHER	PTHR46136:SF19	TRANSCRIPTION FACTOR GTE11	coord: 89..169
None	No IPR available	PANTHER	PTHR46136	TRANSCRIPTION FACTOR GTE8	coord: 89..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr025204.1	Sgr025204.1	mRNA