Sgr021576 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr021576
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Serine/arginine-rich splicing factor SR34A
Location	tig00153764: 107204 .. 121883 (-)
RNA-Seq Expression	Sgr021576
Synteny	Sgr021576

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTATGTCTTGAGAGTTAGATTGACTTCCTTCTTTGCCGGAGCAGCGGTTGTATTGTCTCTGGGGCGTTACCTTCTTCAAAGAGATTACAAGATTGCCTACGACTCCATATCTCAAAAGGTATTCTATGTTGCCAGGTCCCTCTTCTTCTCCATCCCATTTTTCTGTATTTTTACATGAATTTGTTTTTGTTGCATTCGATTTGGGTAGTTCATTTCTAATTCTTTCGTAATTGAATTTATTTTAGACTTAATTTTAGTGAAAATTTTGAATTATCAGGCTAGCTTTGAAATAGCAGAGGTGGAGATACATATTTGTATTCGACGCTAGTTAAAAACTCATCTCTGTTATATCGATATTGAGTGCGACAGCTTAAGGAGAAAAATGAGAATTAGGGATTTCCTTGCGGTGGGAAAAGTCCGATTCTTCATATAGTCGGATGTCATATCTCAGTGGATAGTTATACTCGTGGATCGAAAGTGGTCAGTACAGCAGTGTTCTGTCAATGTTGGGCCGACTTGTTGCTAAATAGTCGCTGAAAATGAAATTTCCTGGCTCAATAATAAAAAATTGTAGAAATGGAAGTTGAAGAAGAGACGTGCCATAATAGACAATATGCAATAAAAATTTCCATAAAATTAATATATTTCTTTGGCTGTGTCGGCTTGATGACCATATCGGCATATGTGTGGAAAAGACCTACCATTTTGCAGATCTTTTCCCCGTTACAAAAATGGGGATACCTTTGGGGCACTAGTCTAGAACTCAAATGATAAAGTCCAAAGAAAGACATTGCTGTAGATTCTCAAGTTCTCGACCATCGTATATGCAAATGGATTTGGAGAGACTCTTACTTCAAAGAAGGTTAAGATGTTCATCTGAGAGCTTCTGTTGAATAGCAACAACACTCACGATACTGTCCAAAGATAGAACCTTAAGAGATCCCTCTCCCAAGTTGGTGTGCCCCATTCAAAAACAGCAAAGAATCTCAAGACGATCTTTGCATACTTTTCTCGATGGCTTTTTGTTTCTAGATTTGAACTCTAATACTTTGAAAATATGAAATGTGTTTCTTTTGAAGTTGGCTTCTCGATATCTAGGATCCTTAGTTTGAATATAATTCTTCTCCTCTCCCTAGTCAATGGCATGGAAGAAAAATTTTAAACCCTCAAAGACATTGTTGATATTGTAAGAAATTTTGTTGGGCCCTTGGATTGGAAAATGAAAAATGGAGATATACTGCTGAGGGGTCATATTCTTGAAATTCAATGTCTCTAGCCATTTACGTGTAATGAAGCGTTATCTTTACTGTTAGCCTATTAGGATATGAAACATATTCTGTTGCATGTTTGATGTTTGTATAAGGACACTTTGGAGGTAACCTTTAGGGGTAGATCATTTTTGTAAAGGCACATTTATTTAGCAGCGAGTTCATGGACTCAAAACCTCTTTAGGCCCCCTATTTGGGTTATTAAATATCTCATGAATTTCTTGAGTGTCAAATGTTGTTAGGTTAGCTAGCAGTCTCCATTTTGAAGTTAACGAATATTGAGAGGCTGGAGGATGTGTAAATCAGAGAGAAAGTAGGAGTTTGAATCAATATTAGAATGAGCAAGTGTAGCTGGAGGACAGAACAGGAGTTTAAGGTTTTGGTTGATTGGAATTCCAGGAGGAAGATCAAAAATTGGTGGAGCTTGGAATGGGAGCAAGAGAAAGGGTTGATATAAATTTGTCAGTGGTTTAAAAATTGTGCCTAGGCGTGCTTCTCAAAAAAGTGAGGCAAGGACGCATCACTTCAAAGAAGCGAGGCCCCATCACAAAGGCGCATGCCTTAGGTCATTTTTTTTAACGGTTTTTTTAATAAAGAAACTAAGAGATATTTTAAAAAAAATACTCATTTCTCTCAACAATTTTATACAAAAGCTATAATTTTTAAACATTTTCATTATCTTCTTGTTCATAATACTATATTTTTTTAGATATAAAAAATTAAATACATTTTTTTTATTGTGCACCTTACAAAAAAGAGCCCTCGCTATGAAAATCTAGGGTAGATTTCTTGAGATCTTCGGTGTTAGTTTGGCTCCTAATAGGGGTTGTTGGTAATATCTAGAATATTTGACTTAATAGAAATAGGATAATTTTTAAGGGTGTAGAAGGTTTTTAATTTGTTATATAAGAAACATCAAGATATATTCAAAAGAGCGACGAAAAAAACAACCTAGGGGCTGAGGTTAGAGAGAACCCTCACCCAAAGCAGCTTCAAAAGAATGGTCTTCCAATCAGTTATAATCATTAGAAGGCTATAGTTACAAAAGAATTTTCTATAGTTTGAACACCACCAGTAAACTATATGCTGCACACTATAATAAAAAGAATCAAAAGGAGAAATCTTATCTTTGAAGATCCTTTAATTGTGCTCTTTCCTAAGAAGCTCGAGAAAAGCTTTTGCCGCACAACTCCACGAAATCTTAGCCTTTGCCTTTGAAATGCCAAACAAGAACGTCCCTGTTTGTTGAGAGCTGAGCTGAATGGATTCCAGAGAAGTCCACTCAATTATCTCCCCATCATTGAAGTCTTGTCCAGAACCAAAGTCTCAAGCATTGTTACTAACATTCCAGAAACCTTTTATAACCAGATCTTTGGAGCTTGGAGTTAACCAATGATACCTTCTGGTAAAAGACAATTTCAGAGGAGTTCTGTCGATCCATAGGTCATTCCATAAGATATGCTGCCACCATCTCCCTCATTAAAATTCCACATGCATCCAGTAAAAAATTTTCAGACTTCTGCAATTAATCCCTCGATCTGAATAGACTAACCTCCTCTCCCTATTATAAATTTACTTACAACCACCTGGTGCCAAAGAGAACCATCTTTCCAATTGAATCTCCATGCCTTCTAGGAACCAAAGCCACGTTCCTTTTAATAAGATTCCCTACCTACCCTAATTCCTTCTCCTCTGCCACTAGAAACGACCTTCCAGTTCACTAAATGACCTTCCCCGTGCTAACCCCTCCAACCTATAAGAAGTCTCATCTTCCTTCTAACCACTTTAGCATCATTAACTGGGATTTTGAAAAAGGATAGAAAGTGGGATACAAGAGATGACAAATTGGGCAACAGAGTTTAGTATCCACCTTTGGAGTTAAGACGTTTTTCCACTTCTATAACCTTTTCTACACCCTTTCAGTTGCTGGATTCCGAAAACTCTTATTTAGGAGATAATCTCCGAGCAGGATACCTAAATAAGGAATGGGCCACTCACCTTCAGAACAGCCAACCTAACAGCCATATCTTGCACCTCTTTGTCTCCAATGTTTATTTCCACAATCATGATTGACTCAAGTTATTTTCAGACCTGAAGAAATAGAGAGTTTGGAGAATATAGAAAGTATCTTCAAGGTCTTTATCATCATGGGGCCAAAACACAATAATGTCTTCTGCATATTGGAGATGGTTCAATTTGATCTATGATTCAATTTGATCTAGTTATTGGCAACTGCCAACCCTTTGCTAAAAAACCCTATGCTAATCCCTTTATCTAAGAGTCTACTAAGGTCCGAGGACATTCGCAATTACAACTAAGTGAAGGGGGAGGGGGTTATTAAAGAAAAACTAAAGCTTTAACTAAATGAAATTAAAGCTAATTAAATTATAGGAAAAGTTTAAATTCATTCAAATTAAATGAAATATAAAAGTTATGTTAATTATTAAACCTTCATTATTTAAACATATTTTTTAAAAGAAACATGCACTTTTGAAGCTTCTATTTCCAAATAATTTCTAGGATTCTACAACTAAATGGTCTTTTAAATTTTAGTAATTTTCAAATGTAACTTTGTTTCCTCTCTCTCTTGTTTGGTTTTTTTTTTCCCGATGTTCATACTTTCTAGAATATTGTTTGTCCTCATAACTTTTAGCCAATTGCAAAAATCTTATTTTCTTGAAATGTCTAAAAGATGATCAAGGAATGATTCTGAAAAAAGGATACCTGAATGTCCAACAGTGCACGTTCAAGTCCATAGTATGAAGTGCCAATATCATGTTTAACTTTCATCTTCAGATTATTGGAATTGCCATTACAGTTTTGAAATGCAAAATTCAGTTAAGGTTACAAGTCAAGTTCCGGCTCTATGAAGTGGAACTAACTATTTAATATAGCTGAATCAAACGAGTCACTGGAGAATGACAGTTTATTTCATTAGAGAATGACAGTTTATATCATCAAACGAATTGTGCAATCAAATGAAATTAACTTGACACCTTTTTATGCTTAATAGGGACGAACCCTTGAAGCCTTAAAGTCTTATGGTATATTATTAAGACAGAGATAAATATTAGCAAGATTTCATTATTCTGCATTGCTGAATTGTCAATCTTAAGCAAAACCTAGTATCAAGTCTAGCAGCAGAAAGAAGTTGACGTTTTTGTCCAATATGCAATTATAAGTACATGCAAACATGCATTCATAACCCAGAAGGTTTATGCTGGTATCAGTTACTTGTCGTAAGGATACATCATTACCATTTTTGGTCTATAATTTCTTCCGCTTTCAAGTCCCAAACCACTTATGGACAATGTTTAAAATATATAAGATCTTTGACACATGCTTTTATCACCCTTCTAATTGTGTGGTGAGGGAAGGAATGGAGGGGGCACTGGACATGATACAATGATAACTTATTGTTTCCTAATGGTTATTCAGATGGGAGGACTGCATGATTCTCTGGAGAGTAGAATTTCGTCACTGGAAAAACTGAACTAGAATGATGGTTCTCAACATGTTCAAAAAGCGGAGTAGACCTGGACGCCAAGCCATGGAAGTTTAAAGGTCTTGCTGGAATTACGAAGAACTTATAAAGAATAATAACAGTAGAAAAACTGGTATGCCTTGTATGCTCATCAAGATGTTAAGTTTTGCTTGGAAGAGTTTGTTTGTTTAACGTATCATTTTTGTTGCTATCAGATTTAGGTTTGTATGAAGCTGGTAGCTATGTTGTAATGAACATTACCATGCTCATTGAAACTTCCCTAAAGTTGATGAGGCTAAATGACCTATCCCTCCCCTTGGGAGCACAACCTTCATCCTTTTCTTACTTTTATTTTGCCAATGTCTGGAGCATCGTGCAAGACTTGAGAATGAGTTTAACGAGAAATCGGAATGAAATTTGTGGAAAGGAGAATAAATTTTTTAAAGTTTAAATATAGTTTTGATATTTGAACTATCTATTTTTGTTTTATTGCTTATGTGTCATATCCAGGCTATTCACACTTTTATTGTAGAGATCAGATTGAGTTCGATGAAAGTTAAACTAAATTCAAATTGGTCATGGTCCGACATGCAAGTACTGTTTATAAATTTGTGATATTTTTAAGAAATCATTGCTCATAAACCAAAAACATGCGAATTAAACTGAAATTCTCAAGTAACATAAAGCCAAAATTGAATTTAGCAAGTAGTATTAATAAATTTGAGATACTTTTCTGGTGAACGGTAGAAATATTTGGGTTGAATTATAGATTTTGTCTTAATCCCAATAAATTCTGACCGTCGATAGAGGTTAAAAAATAATTGATGGGAAGAAGAATGAAGGGGCTTGGTGTCCCATCCTTGCGTCTTATTTCTAAGTGGCATTGCCATAGATCTTTCAATAACTTCACCAATAGTCGGAACGTAGGTGACAAGTGTTCGATCCAAAACTTTCAACTCTTTCCTCTTCACCTTCACCTCTGCTCTTCTTCAAACCCAAACCCCTTAGGAAGACTGCTCCGGGTCGAGTCACGATGCCCTCTTTGACTCTGAGAGCTGAGGCTGGTGGCAACCCCAACAAAGATACATCTCTAGACGTGCATGTTAAAAATCAAAGTAGCCAAGGGATGGCTGTGGAGAGCCGGCCCAGGACCAGGAGTCTGGCCCTGGATGTTTCACCTTATGACAAGTCCTTTCAAAACTAAGTAAGCTCTAGTCTAATGTAATGCTTTTTTAAGTTGTTAAACAAACAAATTGAGATTTAATTACGCTTTAAAAAACTTGCAAGGGCTTTTAGACCCGCTATCTCCAATGAGGACGATGCGACAAATGCTAGACACAGTGGATAGGTTTTTGGACGAGGCAATGTTGAAGCCAGGATGGAGTCGGAGCTGGAGCCGGGCAGAGGTGCAAGCCCCTTAGGACATGGAGAACCATGAAAACAAAATCAGGATGCGTTTTGACATGCTTGGCCTCTCCAAGGAACATGTCAAGGTCTCTGTTGAAGACCACTTTTTGATTATAAAAGGTGAGAATACCAATAGCGTTGAAGATGATGATGCCTCCGACAGTTCCTGGTCTAGAAGGAACACTTGTATGTACGACACTCGCCTTCAACTTCCTGATGGGGTTGACAAGAACAACATCAAGCTGAGCTTAAGAATGGCGTTCTGTACATTACTGTGCCCAAGATCAAAGTTGAACGCAAGGTCATTGAAGTAGAGGTCGAGTGATGTTTAGTTTTTCCCCCTGCCTTCTATTCTCGCTCTCGCTTTTGTTTCTAAGTTTGCTATTATTAGCTCTCTTCTCATGTATATATAATATAACACAACAATTTCCCATTCAACTTTCAAAAGAGAGGCAGTGTTGGAGAAGGTATATAAGGGGCAGGGCAAAGACAGAATCAAATGGCATGCTCATGCTCATGCGCCATGAAGAAAGAGGCAAATTTGCCTAGCCCTTCAGGTGGAAAACCAAAGTGGGTTGTGGCTGCTATATATACATTGGGGAGAGGATTAGAAAGGTGAAAGAAATGGTCAACAAGCGTGCAGAGAGAAAGGCCATAGTGGAGGTGAGGGCGGCGGGTTGGCCTTTGTGTTTCTACTCCAATTCTCAACAACTGGGCGCCCACTATTGTCTACACTCTATACTTGTGTCACCTTCTAGCTACCAACTTCTTGGGTTACGGCCAAGCAACAGAGGAGTCCTGTCCTGTGGCCCATGGAAAAAAGTCGAACAGTTGGTGCTCATATTCTGCTGGAGTTGATTCTTCCCCTAACCTGGAGAAGTGAGAGGCAAGTGGATGCGAAGCTGATATTTTTCAGGTGGCAGTTTGGAGTATTGGATCAATAGGTTGTTTGCTTTTGATTGTTTGGTAGTTGCGATCAACTGAGGTTAAAGTTAAGAATTACGATAGTGGGTGTGGTTAAGTTAGGCGAAGAGATAAGGAAGGAAGACGTGAGGTTCCTTGCCTTCCGTTTGGTTTGCTCCATAAAGCTGAATCGAAAAAGCAGCAAAAAGCTTCACGACAAAGTTTGGTTTGGTTTGTGGAGTGGATCTATGTATATATAATATATGTATAAGATCTGTTTTGCTTACCCACTAAAACAAAACAATCAATGGAACAAAATACTAAAGGCACAAAATTGATTGATTGGGGATAAAATAGTTTGCTTGGTTTTGTTTTGTTGGATAGTGGGAAGGTGGACGTCAAATGGTCATATAATCTTGTGTGATTTACATAAGGTGAATTTTCCACAATATTCAATGATTTTACACGAGGAGATTTCTCCTTTGCCTTACAATTCTCCTATCAACTTCCTTAATTAAAAAAGCAAAGGCCGTATACAGGGAAGATTTAAAATGTCAAGTATTCATCAAATATCAAGTTAATGGGCATTTGTGGAAACACCAGTGAGAATAAATGATTTATAAAATTTATTTCAATTTGTATATATTTGATATTTTTGTTAATACTTTTTACGATGTTTTTGTACTATGTTGAAAATATTAATTTGTTATGGGTGAAAATTTTAAAATTATAACATAGAAGTGTTGTGTCAGTAATTGTCAATCGATAATTAAGCTATCGAGTGAGACTAAGCTTTAGGATCACAAGGTGAGTAACTGCCAAAAGATACCAAGTGGGTTGTAGCTTGCCAAGTAGATCATCATAAGCTACTAGGTGGGGTGAGCCTAGCCTACATTGGATAGACCAAAAGACATTGAAACATGTGGATTGCAACTTGACTAGGTGAGATAGTTAAGTTATAGCCCATCCCAATGAGACCATAAGCTATTTAGTGGACTCTAATCTAATTAGGTAGAACTAGAAGTCACCTAACCCAGGTGGACTGTAACTCGACTAGGTAGTTCATATCCCCATCAAGTGAGATGGACACCATAAGTTACTATGTAGCTCCTAGCCTAACTAAGTGAGACCAAAAGTCTCTTACCCAAGTGGGTTATAACCTGATCAAGCAAGACAAAGCAAGTTATAGGTTAACTATGTGAGATCAAAAGTTACTAGACGGGCTTAGCTAATTAGATAGGGACTAAAATACTAGTTTTATTAGAAAGACACAGAATTATGGAAATGGGTCAACATTGTACTACAGGTAGACCCTAAAATTAATATATTTTAGTGCAAAATATTGAATTGAGGTGTTGGCTTTGTTTTGTTTTGTAGGGAAGGGGAATGGTACCTTTATCATGGTTTGACTTTGAGGCAACACAAAATTGTAGGGATCTTAACTACATCTCTACTTTATAATATATACATATATATGAGACTTTGGAGAGGAATTAGCATGAGAGAGAAAAGTTTAGGGCACTATACAAGAGAAAAAATTCGGGGTAGGGGCATGCCCCTCCAGGTTCATAAATACATTTGTCTCTGAAAATAGTGATCATGTATGAATTTAAAAATAATATTTTTTTTTAAAGCAGTCAAATGTTAGTTTACTAATATTTTAACAGGTTAAATTTCTATTTACAAGTAATTTTAGATTAAATAAGTTATTATGTGTAAAGTCACATAAATAATTTTTTTTTTTAATTTTTGAGAATATCATATTACAATTGTGGGGTGAAGATTTAAACCTACAAACTTTTAGAAGAAGTAGAAATGTCTTAACTGCTGGTTATGCTACAAATGAGTAAATTTTTTATTTTAGATTAAAAAATACTTTTAGTTCTTGTACTTTCATTTAAGTAACGATTTAGTTCCTGGACTTTAATATGTAACGATTTAGTCATTGTACTTTAAAATTTGTTACAATTTAGTCCTTATAATTTAAAATTTGTAACGATTTAGTCCCTACCATATAAAATTTTGTTAAGATTTAATGAAATTTCTTACATATGTAGATTGATAAATCGCTTAGAGACTAAATGTGTTTATAAACTACGGTGACTAAATCGTTACATATTAAAAATCGATACTTCATCTTGATGAGATTTTTCATAGTAAGGACTAAATTGTTACAAATTTAAAAATACAATGACTAAATCGTTACATATTAAAATTTAGGGACTCAATTGTTTCAAATTAAAAAGTACAGAGACTAAATCGTTACATATTAAAGTTTAGAGACTAAATTGTTATTTCAATAAAGATACAAGGGCCAAAAGTGTTTTTTAACCTTTATTTTTTGAGTGAATGATATGTCTAATTCATGAAATTAAAAATAGAATACTTTCAACTCAATGAATAGAATGTATTTAGACATTACATGATTATTTTGTCAATTAATTATAATATTTTGTGATAGTAAACACTTTCATTGAAAAAAATCAATACAGAAAAGATGAAACTAAAACATTTAAAAAATTAAGGGTTAAATCGATAAAAGACCATAAGGATTAAATTATATATTTTCTACTAAAAAAAATTTATATATTTAACCCATTTCCATCCTCATTTCCTCGATCCAAAACGGCCCAAATTGAAATAAAAATTCCTCGTAAAACAAAAAAAAGTAGAAATAAAAATTCGGGCAGTGGGCAGTGACATCGTGATATGATAATGGCATATTTGGAAAATCCCTCCCTCGCCTGTGGTATATTATCCTCTATTACAACCTAACCCTAAGCCCTTCGTTATCCCGTCGGATCGCAGTTGAAGGAGGATCCGAAACACAGCAGCCAACCACCAGGTCTTCCTCGAGCTCGGTGCAGTCTACTTAATCAGTTTCCTAACCTTCGGTATGTTGCTCTCAAGAGATGTTATTGCTATCTCTAATCAGCGCATAACTATAATCAATCTACAGTCATATGCGTGCTTAGATATATGATTACTCAGACATGTCTGTTTCCGAGTGTTTTATGGTATGGGTGATAGATAAGATGTTAGCAGTAGTTGGATTTACATTTTGTTTAGTCAGCACACTCGTTGTTTTGACTAGGATGCGGCATTTAGTTAATTCAGATGGATTTCACCATCATGGATAAATTTTTTTGAATTGGATATTATGTGCTCGATTGTTTTGATGTTGTGTTTTCTCGGTGTGTTAAATCAAGAACACCTCGAGCCGAATTACGCAGTTTTAAATTTGAAATTCAATTCCCTGTTTCTTGTGGAAATTGCCAAAAAATAGTCTTCGGCCTCAAATATTTCATATATTGAAGCGGCTGATTAGATGGTTGAATTTTATTTCTGCATTCCTCCTAGATTACTTCCATTGGACACTTGTCATTGAAATCAACTCAACACTATAGTGGTTGGTGTAGTCGAACCCAGAAAAGCTGCTTTTCTTTGGGTTAGGGCCTTACTTAGATCTTTGGAACTGAGAAAATTGTCTACTGGGTCATATTTGTCACTCTCATTTCTGTATATATGCTGATTCAAGGTGGAATACATTTATCTATAACAGCATTAACCACAAATCCACTTTCCTATATCTTGGAACCATAAATTAGTGTAATTGACTTTATGTTTTTTTCTATGTTTGTACTTCAGTCGTAAAAGCTATTAACAACTTGGAACCAAAGTTTGGGGTTTTCTTTTTCTAACCACGCTTCTATCTATGCATTCCCCATACTGAATTGGTGCTACAATTTTCCTCAATTTCTGCCCTGTTAGTTCGGAATTACGGAAATAAAAGTGTAACTCAGGAACCTAGCTTGTTGAATTTTGTTTCCATTTTGTTAATTGATGGTACATTATGGTATTTTCGTTTCATTATCCTTTATGGAATTTTTCCACCGACCTCAGATAATGAAGCTGGACTAAGAGTATTATCTATTTGTGATAAAACCCTTATGTTTTATATGACATGTCCTTAAATTTGTTGATAAGAAAGGCAGAAAACATTTGCACCATTCCTCTTTGGAATTGGATGCAACATAATTGAGGGTTTCACCGATCATCTAAAGTTAATCAATGGAGGACACCCTACATATTTTTTTAGGATTGTTTTCTCAATGCTGTTAAAGAAAGCTGAGTAAGGTAAAATTAATCATGTATGTCACTCTTACCTCATCTCATGACACAGATGCTTTCTTTATGATAGATAACAAGCCATTGGACAAATATGAGCATTGCAATCATCCATAGGGATATAGAGAGGGAATGGGAGAATCATTATGGAGTTATGGGTATTATTTTTTTAAATGGAGATTCTTGCTCACTCTCAGAAGAGTTATGCACTGCTAAAATTCTGGAGAGGATGAGGAGATACAAAATTTATTTCAATATTATAATACCTTTGGAGCAAATGAGCAATGGAGTTGTGGAGCACGACTCACATCAAGGATTGCTCTCTTGGTTTGCTTCATTGTTTTTTGTTCTGCCTTATTTTGAGAGTAAAGTTGTTGATGCTGATGGCAATTGGATATGGTGGTAGATGGTGTTTCTTTCCTTTTGATGATTAGTTGTACAGATGTATGATGTTATGACATAACATGTGCAGGGATAATATTTCACACTTGCTCAGAGTAATTTGTCACCTTGAAGATGAGTAGTCGTTTTTCTCGCACGATATATGTTGGAAACTTGCCCTCTGACATAAAAGAATATGAAATTGAAGATTTGTTCTACAAGGTATATGTTTGTATTCTTAGCTGTTTCTTGTCACGTGGTGTCTATGTGCAAAATTTTGCTATTTTCTCGTTTCATGTTTTAAAATTTGAATACTATTCTCAATTATTTTAAGTTTCTTAGGGAGGTACATTACGATGGTGATTTACAGAGTCATTCAAATCAGTTTTAATTTTTAATTTTGAAAGGAAAATTGACTACATGTATTTTGTGGCTTCTGCATATTTAAGGTTTAATTTATGTAATCTTAAGAATTCTACATGATTAATATTTCCTTTGGCAGTATGGTCGGATATTGGATATTGAATTGAAGATTCCGCCTCATCCTCCATGTTATTGTTTTGTGGAGGTATTGCTATTGATCTGTAGTTTTTATTTACTTTTGGCTGCATTTGCAAAATTGTTTTTCATGACATTATGTGCTTTTGGTTGTTAGTTTGAGAATGTTAGGGATGCAGAAGATGCAATCCGAGCTCGTGATGGATACAATTTTGATGGTTGCCGTCTAAGGGTAAAAACTAAATCTTCTTTTTCCTTCATTTCCTGATTCTTGTTATTTTTATTTTTATTTATTTTTATTTATTTTTAAAGGTTGAGCTTGCACATGGTGGTGGTGGTGGAGGAGGTTTTGGTGTCTCAAAATGATCAGAATATCGAGGTGCGGGAATATATATGATGCATCTATATAAGGGAGCATGTTGTTAACAAAATTGCCTATGTAAAATATTCCATTAGGTTCATATTAGTTTCAACGTTCTAACGAATGTTTAATTTCCCTCACAGTTATTGTACGTGGACTCCTATCTTCTGCTTCTTGGCAGGATTTGAAGGTGTTAGAATCTTTATTGTGCAACCAAAGATTAACTGTTTCTTTTATGGGATCATTTTGATGACTTTCATTGATATAATGCTTTCAGGATCATATGCGTAAGGCTGGTGATGTAAGTTTTGCTGAAGTTTCCCGTGACAGTGAAGGTAATTACATACGTCTTTCACCCTGTACCATGAATTGCTAATTTCGTTTTCATTATGTGCAAAACAGTTTTACTGTGTAGGAATGATTTCTTAAGCCAATATTGCACATTTGTTTTATTTTACAAATTCAACTCTTGTGGATATTCCTGATCATTTTTTTAGAGTAATTATAAATATAATGCACATGATATGAGTAAAAATGTAAGATGTGCATCATCAATAATTCTTACTGCAAATTTTTAATTTATGCATTAGTTCCTCTCTCGACCTCAGAACATAATGTGTTGGATGGGTCTTTTGTAGTAGTATTTTATATTTGAAAAATGGTTCAAACCTTTTTCGGTACTCTGCGATTGAACCCTCCTGTTTGATTGCCAGAAATCGTTCACACAGTCTCCCCTCATGGGACAGTCAAAAGCGCACAAATAATCGATCCTTCAAGTCGTCCCACCCTCTGAACCGTCTTTTATTTTTAGCCCATCGATACCAGGAGAGGGCCTTTTCATCAAAACTCAAAATGGATACTATCACCTTTTCTGCGTTTGAAAGTTCATGGATCTCAAAGTAATGTTCCCCCCCCCCCCCCCCCCCCCCCCCGAAATAACCACAAATCTGGGTGGTCGCCTGAGAACATCGACATCTCGACCTTCTTGAACTTATTCCATTTTCCGTGACAGTCTTATTCTTTCTTTTGGGACGACTCGCCTTCCTCCCTGACGTCCCCGTGTTTCTGTTCGCTAATGGCGTTCTCCTCCCCGATGGCTTTTCTCTTTTGGGATGACCCTTCCATTTCTGTAGACGTTGTTGACTTCGCCTTTCCACTGGAGAGTTCCAACATGATTGTGACCACGACCTTCCTTGTTTCTTCCCCAGAGTGCTAGTTCTCGTCTAACCTTAAGATGATTTACTCAATGTTTTGAGACATGGTTGTCATTGAACGCTCGAGAGCTGGAATCTTCTGGAGTTTCGTTTTGACGCTTCCCAACTCCTTCGAGAGCTCAAGACACACCTCTAGCTTTTTCTAAGCCATCTTCTCAAGTTTTCCCAGGGTGAACGTGCTCTGATACGACGATGTAAGGTATCTCTCTTACTACGACAGCGATTCTATTCACAAAAATATCAAGAGAACACCGAAATAACCCAGCCTGTTCCAGAGGGCTAGTAAGCTCTCCACACCAATAACCTATTACTACCAAAAGCATGAAAACATCTCTCTCAAGGTACCCCATACAAATATGCGTTCCCCCTGCCCCTCTAACTAACTGTCGAGGATACAATCTCCTTTTTACCCTTTCTAGCTTAGGTATTTACAACTGGAGGCCTATCATGTTCCATTCTGAATGAATCTCAAGGTTAACCTTGATACTATCATTAAGGCCATGGCATTATTGGTTGTATCTCGATCTCTATTTCGAGCTCCTCTCATGATAGTTCTAGATAAATATGATGATATCAAGGCTAACTTTAGTTTTTGGGCCCAAAAGTTTTAATTTGATCTCTTTACTTTTTCATCATTTGATTGGTCTTTAGAAATATGATAAGTTATACGTGGTTGAACTGCACAAGAAATAATAGAAATTTAATGGGTTATTGATAGTACTTTGAAATCAGATTAGCCTTAGTCTCATTTTTTATTTTCAATCAATAATATCTTAATCTGAACCTAAGTTCACGCATTTTTTTTAACTAATGTGACCTAAGGAATAACCTTGTCAGTAAAACAAGGCCATATAATGTAAAGCACTAACTGACAGAAGGTGAAATCTCTTTTCAGGGGCGGGAAGGTAGCGATTGATGCAAAGCTATGATTATATAAATGGGTTGTTATAATATTCAGGATGATGCAACATTGCGTTGGATTTCATTTTGGCTTAGGACCTATGCGGACTGGTTATGAGGAGTTGAGTTAG

mRNA sequence

ATGGGTTATGTCTTGAGAGTTAGATTGACTTCCTTCTTTGCCGGAGCAGCGGTTGTATTGTCTCTGGGGCGTTACCTTCTTCAAAGAGATTACAAGATTGCCTACGACTCCATATCTCAAAAGGTATTCTATGTTGCCAGGAAGACTGCTCCGGGTCGAGTCACGATGCCCTCTTTGACTCTGAGAGCTGAGGCTGGTGGCAACCCCAACAAAGATACATCTCTAGACGTGCATGTTAAAAATCAAAGTAGCCAAGGGATGGCTGTGGAGAGCCGGCCCAGGACCAGGAGTCTGGCCCTGGATGTTTTTGGACGAGGCAATGTTGAAGCCAGGATGGAGTCGGAGCTGGAGCCGGGCAGAGGTGAGAATACCAATAGCGTTGAAGATGATGATGCCTCCGACAGTTCCTGGTCTAGAAGGAACACTTGTATGTACGACACTCGCCTTCAACTTCCTGATGGGGTTGACAAGAACAACATCAAGCTGAGCTTAAGAATGGCGTTCTGTACATTACTGTGCCCAAGATCAAAGTTGAACGCAAGGTGGAAAACCAAAGTGGGTTGTGGCTGCTATATATACATTGGGGAGAGGATTAGAAAGGTGAAAGAAATGGTCAACAAGCGTGCAGAGAGAAAGGCCATAGTGGAGGTGAGGGCGGCGGCTACCAACTTCTTGGGTTACGGCCAAGCAACAGAGGAGTCCTGTCCTGTGGCCCATGGAAAAAAGTCGAACAGTTGGTGCTCATATTCTGCTGGAGTTGATTCTTCCCCTAACCTGGAGAATTGCGATCAACTGAGGTTAAAGTTAAGAATTACGATAGTGGGTGTGGTTAAGTTAGGCGAAGAGATAAGGAAGGAAGACGTGAGGTTCCTTGCCTTCCGTTTGTATGGTCGGATATTGGATATTGAATTGAAGATTCCGCCTCATCCTCCATGTTATTGTTTTGTGGAGTTTGAGAATGTTAGGGATGCAGAAGATGCAATCCGAGCTCGTGATGGATACAATTTTGATGGTTGCCGTCTAAGGGATCATATGCGTAAGGCTGGTGATGTAAGTTTTGCTGAAGTTTCCCGTGACAGTGAAGGACCTATGCGGACTGGTTATGAGGAGTTGAGTTAG

Coding sequence (CDS)

ATGGGTTATGTCTTGAGAGTTAGATTGACTTCCTTCTTTGCCGGAGCAGCGGTTGTATTGTCTCTGGGGCGTTACCTTCTTCAAAGAGATTACAAGATTGCCTACGACTCCATATCTCAAAAGGTATTCTATGTTGCCAGGAAGACTGCTCCGGGTCGAGTCACGATGCCCTCTTTGACTCTGAGAGCTGAGGCTGGTGGCAACCCCAACAAAGATACATCTCTAGACGTGCATGTTAAAAATCAAAGTAGCCAAGGGATGGCTGTGGAGAGCCGGCCCAGGACCAGGAGTCTGGCCCTGGATGTTTTTGGACGAGGCAATGTTGAAGCCAGGATGGAGTCGGAGCTGGAGCCGGGCAGAGGTGAGAATACCAATAGCGTTGAAGATGATGATGCCTCCGACAGTTCCTGGTCTAGAAGGAACACTTGTATGTACGACACTCGCCTTCAACTTCCTGATGGGGTTGACAAGAACAACATCAAGCTGAGCTTAAGAATGGCGTTCTGTACATTACTGTGCCCAAGATCAAAGTTGAACGCAAGGTGGAAAACCAAAGTGGGTTGTGGCTGCTATATATACATTGGGGAGAGGATTAGAAAGGTGAAAGAAATGGTCAACAAGCGTGCAGAGAGAAAGGCCATAGTGGAGGTGAGGGCGGCGGCTACCAACTTCTTGGGTTACGGCCAAGCAACAGAGGAGTCCTGTCCTGTGGCCCATGGAAAAAAGTCGAACAGTTGGTGCTCATATTCTGCTGGAGTTGATTCTTCCCCTAACCTGGAGAATTGCGATCAACTGAGGTTAAAGTTAAGAATTACGATAGTGGGTGTGGTTAAGTTAGGCGAAGAGATAAGGAAGGAAGACGTGAGGTTCCTTGCCTTCCGTTTGTATGGTCGGATATTGGATATTGAATTGAAGATTCCGCCTCATCCTCCATGTTATTGTTTTGTGGAGTTTGAGAATGTTAGGGATGCAGAAGATGCAATCCGAGCTCGTGATGGATACAATTTTGATGGTTGCCGTCTAAGGGATCATATGCGTAAGGCTGGTGATGTAAGTTTTGCTGAAGTTTCCCGTGACAGTGAAGGACCTATGCGGACTGGTTATGAGGAGTTGAGTTAG

Protein sequence

MGYVLRVRLTSFFAGAAVVLSLGRYLLQRDYKIAYDSISQKVFYVARKTAPGRVTMPSLTLRAEAGGNPNKDTSLDVHVKNQSSQGMAVESRPRTRSLALDVFGRGNVEARMESELEPGRGENTNSVEDDDASDSSWSRRNTCMYDTRLQLPDGVDKNNIKLSLRMAFCTLLCPRSKLNARWKTKVGCGCYIYIGERIRKVKEMVNKRAERKAIVEVRAAATNFLGYGQATEESCPVAHGKKSNSWCSYSAGVDSSPNLENCDQLRLKLRITIVGVVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRDHMRKAGDVSFAEVSRDSEGPMRTGYEELS

Homology

[Close]

BLAST of Sgr021576 vs. NCBI nr
Match: GAU43666.1 (hypothetical protein TSUD_302290 [Trifolium subterraneum])

HSP 1 Score: 141.0 bits (354), Expect = 2.1e-29
Identity = 69/111 (62.16%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 255 SSPNLENC---DQLRLKLRITIVGVVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPP 314
           S+ +L++C   + +  +   TI  V  L  +IR+ ++  L ++ YGRI++IELK+PP PP
Sbjct: 24  STAHLKDCSLVENMSSRFSRTIY-VGNLPSDIRESEIEDLFYK-YGRIMEIELKVPPRPP 83

Query: 315 CYCFVEFENVRDAEDAIRARDGYNFDGCRLRDHMRKAGDVSFAEVSRDSEG 363
           CYCFVEF+N RDAEDAIR RDGYNFDGCRLRDHMRKAGDV FAEVSRDSEG
Sbjct: 84  CYCFVEFDNARDAEDAIRGRDGYNFDGCRLRDHMRKAGDVCFAEVSRDSEG 132

[Close]

BLAST of Sgr021576 vs. NCBI nr
Match: KAG6605812.1 (Serine/arginine-rich splicing factor SR34A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-25
Identity = 135/420 (32.14%), Postives = 157/420 (37.38%), Query Frame = 0


Query: 1   MGYVLRVRLTSFFAGAAVVLSLGRYLLQRDYKIAYDSISQKVFYVARKTAPGRVTMPSLT 60
           MGY+LRVRL SFFAGAAV  SLG Y+LQRDYKIAYDSISQK+                  
Sbjct: 1   MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKM------------------ 60

Query: 61  LRAEAGGNPNKDTSLDVHVKNQSSQGMAVESRPRTRSLALDVFGRGNVEARMESELEPGR 120
                GG         +H  +  S+  A+E   +   L L  F  G+  A M + L    
Sbjct: 61  -----GG---------LH-DSLESRISALEKLNQNDDLGL--FHAGSYVAVMLTLL---- 120

Query: 121 GENTNSVEDDDASDSSWSRRNTCMYDTRLQLPDGVDKNNIKLSLRMAFCTLLCPRSKLNA 180
                                                  +   + +A   L  P  K   
Sbjct: 121 ---------------------------------------VLAPVAVACYPLPRPNPK--- 180

Query: 181 RWKTKVGCGCYIYIGERIRKVKEMVNKRAERKAIVEVRAAATNFLGYGQATEESCPVAHG 240
                     ++    R R++     KR                    Q   ES      
Sbjct: 181 ---------PFVINSGRCRRISSTEGKR--------------------QFFFES---LLS 240

Query: 241 KKSNSWCSYSAGVDSSPNLENCDQLRLKLRITIVGVVKLGEEIRKEDVRFLAFRLYGRIL 300
           + S  WCS    V   P+L N            +   +   E   ED+    F  YGRIL
Sbjct: 241 RGSRFWCSL---VRQFPSLWN-----------NISNAQTNLENEIEDL----FYKYGRIL 289

Query: 301 DIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLR------------------ 360
           DIELKIPP PPCYCFVEFENVRDAEDAIR RDGYNFDGCRLR                  
Sbjct: 301 DIELKIPPRPPCYCFVEFENVRDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSSDHRSN 289

Query: 361 ------------------------------------DHMRKAGDVSFAEVSRDSEGPMRT 367
                                               DHMRKAGDV FAEVS DSEG   T
Sbjct: 361 YGGSGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSHDSEGTFGT 289

[Close]

BLAST of Sgr021576 vs. NCBI nr
Match: KAF9671054.1 (hypothetical protein SADUNF_Sadunf12G0006900 [Salix dunnii])

HSP 1 Score: 125.6 bits (314), Expect = 9.2e-25
Identity = 65/111 (58.56%), Postives = 74/111 (66.67%), Query Frame = 0


Query: 276 VVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYN 335
           V  L  +IR+  V  L ++ YGRILD+ELK+PP PPCYCFVEFENVRDAEDAIR RDGYN
Sbjct: 11  VGNLPADIRESKVEDLFYK-YGRILDVELKVPPRPPCYCFVEFENVRDAEDAIRGRDGYN 70

Query: 336 FDGCRLR----------------------DHMRKAGDVSFAEVSRDSEGPM 365
           FDG RLR                      DHMRKAGDV FAEV+RDS+G +
Sbjct: 71  FDGSRLRVELAHGVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTL 120

[Close]

BLAST of Sgr021576 vs. NCBI nr
Match: PWA48404.1 (serine/arginine-rich splicing factor SR34A [Artemisia annua])

HSP 1 Score: 121.7 bits (304), Expect = 1.3e-23
Identity = 62/110 (56.36%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 282 EIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYNFDGCRL 341
           +IR+ +V  L ++ YGRILDIELK+PP PPC+CFVEF N RDAEDAIR RDGYNFDGCRL
Sbjct: 131 DIRESEVEDLFYK-YGRILDIELKVPPRPPCFCFVEFANARDAEDAIRGRDGYNFDGCRL 190

Query: 342 R-----------------------------DHMRKAGDVSFAEVSRDSEG 363
           R                             DHMRKAGDV FAE+SRDS+G
Sbjct: 191 RVTQNFDHLFWVMSFIVRGLPSSASWQDLKDHMRKAGDVCFAEISRDSKG 239

[Close]

BLAST of Sgr021576 vs. NCBI nr
Match: GFY81791.1 (SER/ARG-rich protein 34A [Actinidia rufa])

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-23
Identity = 65/124 (52.42%), Postives = 68/124 (54.84%), Query Frame = 0


Query: 292 AFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLR--------- 351
           A+RLYGRILD+ELKIPP PPCYCFVEFEN RDAEDAIR RDGYNFDGCRLR         
Sbjct: 27  AYRLYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGRG 86

Query: 352 --------------------------------------------DHMRKAGDVSFAEVSR 363
                                                       DHMRKAGDV+FAEVSR
Sbjct: 87  PPPASERRGGYGGSSGGRHGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVTFAEVSR 146

[Close]

BLAST of Sgr021576 vs. ExPASy Swiss-Prot
Match: A2RVS6 (Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR34A PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.8e-21
Identity = 60/150 (40.00%), Postives = 73/150 (48.67%), Query Frame = 0


Query: 276 VVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYN 335
           V  L  +IR+ ++  + ++ YGRI+DIELK+PP PPCYCFVEFE+ RDAEDAI+ RDGYN
Sbjct: 11  VGNLPGDIREHEIEDIFYK-YGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYN 70

Query: 336 FDGCRLR----------------------------------------------------- 363
            DGCRLR                                                     
Sbjct: 71  LDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRGL 130

[Close]

BLAST of Sgr021576 vs. ExPASy Swiss-Prot
Match: Q9XFR5 (Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR30 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-16
Identity = 56/137 (40.88%), Postives = 67/137 (48.91%), Query Frame = 0


Query: 276 VVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYN 335
           V  L  +IRK +V  L ++ YG I+DI+LKIPP PP Y FVEFE+ RDA+DAI  RDGY+
Sbjct: 11  VGNLPGDIRKCEVEDLFYK-YGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYD 70

Query: 336 FDGCRLR--------------------------------------------------DHM 363
           FDGCRLR                                                  DHM
Sbjct: 71  FDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSASWQDLKDHM 130

[Close]

BLAST of Sgr021576 vs. ExPASy Swiss-Prot
Match: O22315 (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.4e-14
Identity = 45/94 (47.87%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 274 VGVVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDG 333
           V V  L  +IR+ +V  L F  YG ++ I+LK+PP PP Y FVEF++ RDAEDAI  RDG
Sbjct: 9   VYVGNLPGDIREREVEDL-FSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDG 68

Query: 334 YNFDGCRLRDHMRKAGDVSFAEVSRDSEGPMRTG 368
           Y+FDG RLR  +   G  S    S D+ G    G
Sbjct: 69  YDFDGHRLRVELAHGGRRS----SDDTRGSFNGG 97

[Close]

BLAST of Sgr021576 vs. ExPASy Swiss-Prot
Match: F4JHI7 (Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR34B PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.2e-13
Identity = 43/92 (46.74%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 276 VVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYN 335
           V  L  +IR+ +V  L F  YG ++ I+LKIPP PP Y FVEFE+ RDA+DAI  RDGY+
Sbjct: 11  VGNLPGDIREREVEDL-FSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYD 70

Query: 336 FDGCRLRDHMRKAGDVSFAEVSRDSEGPMRTG 368
           FDG  LR  +   G  S  +      G  R G
Sbjct: 71  FDGHHLRVELAHGGRRSSHDARGSYSGRGRGG 101

[Close]

BLAST of Sgr021576 vs. ExPASy Swiss-Prot
Match: Q7SXP4 (Serine/arginine-rich splicing factor 1A OS=Danio rerio OX=7955 GN=srsf1a PE=2 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 3.9e-10
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0


Query: 276 VVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYN 335
           V  L  +IR +DV  + ++ YG I DI+LK     P + FVEFE+ RDAEDA+ ARDGY+
Sbjct: 19  VGNLPPDIRTKDVEDVFYK-YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYD 78

Query: 336 FDGCRLRDHMRKAG 350
           +DG RLR    ++G
Sbjct: 79  YDGYRLRVEFPRSG 91

[Close]

BLAST of Sgr021576 vs. ExPASy TrEMBL
Match: A0A2Z6NIS3 (RRM domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_302290 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-29
Identity = 69/111 (62.16%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 255 SSPNLENC---DQLRLKLRITIVGVVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPP 314
           S+ +L++C   + +  +   TI  V  L  +IR+ ++  L ++ YGRI++IELK+PP PP
Sbjct: 24  STAHLKDCSLVENMSSRFSRTIY-VGNLPSDIRESEIEDLFYK-YGRIMEIELKVPPRPP 83

Query: 315 CYCFVEFENVRDAEDAIRARDGYNFDGCRLRDHMRKAGDVSFAEVSRDSEG 363
           CYCFVEF+N RDAEDAIR RDGYNFDGCRLRDHMRKAGDV FAEVSRDSEG
Sbjct: 84  CYCFVEFDNARDAEDAIRGRDGYNFDGCRLRDHMRKAGDVCFAEVSRDSEG 132

[Close]

BLAST of Sgr021576 vs. ExPASy TrEMBL
Match: A0A2U1LHB7 (Serine/arginine-rich splicing factor SR34A OS=Artemisia annua OX=35608 GN=CTI12_AA479010 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.4e-24
Identity = 62/110 (56.36%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 282 EIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYNFDGCRL 341
           +IR+ +V  L ++ YGRILDIELK+PP PPC+CFVEF N RDAEDAIR RDGYNFDGCRL
Sbjct: 131 DIRESEVEDLFYK-YGRILDIELKVPPRPPCFCFVEFANARDAEDAIRGRDGYNFDGCRL 190

Query: 342 R-----------------------------DHMRKAGDVSFAEVSRDSEG 363
           R                             DHMRKAGDV FAE+SRDS+G
Sbjct: 191 RVTQNFDHLFWVMSFIVRGLPSSASWQDLKDHMRKAGDVCFAEISRDSKG 239

[Close]

BLAST of Sgr021576 vs. ExPASy TrEMBL
Match: A0A7J0E5K6 (SER/ARG-rich protein 34A OS=Actinidia rufa OX=165716 GN=Acr_02g0000310 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 8.4e-24
Identity = 65/124 (52.42%), Postives = 68/124 (54.84%), Query Frame = 0


Query: 292 AFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLR--------- 351
           A+RLYGRILD+ELKIPP PPCYCFVEFEN RDAEDAIR RDGYNFDGCRLR         
Sbjct: 27  AYRLYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGRG 86

Query: 352 --------------------------------------------DHMRKAGDVSFAEVSR 363
                                                       DHMRKAGDV+FAEVSR
Sbjct: 87  PPPASERRGGYGGSSGGRHGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVTFAEVSR 146

[Close]

BLAST of Sgr021576 vs. ExPASy TrEMBL
Match: A0A5J5AVN4 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_031029 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 8.4e-24
Identity = 68/136 (50.00%), Postives = 78/136 (57.35%), Query Frame = 0


Query: 279 LGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYNFDG 338
           L  +IR+ ++  L ++ YGRILDIELKIPP PPCYCFVEFEN RDA+DAIR RDGYNFDG
Sbjct: 14  LPSDIREWEIEDLFYK-YGRILDIELKIPPRPPCYCFVEFENSRDADDAIRGRDGYNFDG 73

Query: 339 CRLR---------------------------------------DHMRKAGDVSFAEVSRD 372
           CRLR                                       DHMRKAGDV FAEVSRD
Sbjct: 74  CRLRVELAHGGRGQSSSSDRRGGYGGGVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD 133

[Close]

BLAST of Sgr021576 vs. ExPASy TrEMBL
Match: A0A2P2LQG4 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-23
Identity = 69/139 (49.64%), Postives = 75/139 (53.96%), Query Frame = 0


Query: 276 VVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYN 335
           V  L  +IR+ +V  L ++ YGRILDIELKIPPHPPCYCFVEFEN RDAEDAIR RDGYN
Sbjct: 11  VGNLPSDIREWEVEDLFYK-YGRILDIELKIPPHPPCYCFVEFENARDAEDAIRGRDGYN 70

Query: 336 FDGCRLR----------------------------------------------------D 363
           FDGCRLR                                                    D
Sbjct: 71  FDGCRLRVELAHGGRGQSSIDRRTGYGGSGGGRYGISHHSEYRVIVRGLPSSASWQDLKD 130

[Close]

BLAST of Sgr021576 vs. TAIR 10
Match: AT3G49430.1 (SER/ARG-rich protein 34A )

HSP 1 Score: 104.0 bits (258), Expect = 2.7e-22
Identity = 60/150 (40.00%), Postives = 73/150 (48.67%), Query Frame = 0


Query: 276 VVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYN 335
           V  L  +IR+ ++  + ++ YGRI+DIELK+PP PPCYCFVEFE+ RDAEDAI+ RDGYN
Sbjct: 11  VGNLPGDIREHEIEDIFYK-YGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYN 70

Query: 336 FDGCRLR----------------------------------------------------- 363
            DGCRLR                                                     
Sbjct: 71  LDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRGL 130

[Close]

BLAST of Sgr021576 vs. TAIR 10
Match: AT3G49430.2 (SER/ARG-rich protein 34A )

HSP 1 Score: 104.0 bits (258), Expect = 2.7e-22
Identity = 60/150 (40.00%), Postives = 73/150 (48.67%), Query Frame = 0


Query: 276 VVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYN 335
           V  L  +IR+ ++  + ++ YGRI+DIELK+PP PPCYCFVEFE+ RDAEDAI+ RDGYN
Sbjct: 11  VGNLPGDIREHEIEDIFYK-YGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYN 70

Query: 336 FDGCRLR----------------------------------------------------- 363
            DGCRLR                                                     
Sbjct: 71  LDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRGL 130

[Close]

BLAST of Sgr021576 vs. TAIR 10
Match: AT3G49430.3 (SER/ARG-rich protein 34A )

HSP 1 Score: 104.0 bits (258), Expect = 2.7e-22
Identity = 60/150 (40.00%), Postives = 73/150 (48.67%), Query Frame = 0


Query: 276 VVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYN 335
           V  L  +IR+ ++  + ++ YGRI+DIELK+PP PPCYCFVEFE+ RDAEDAI+ RDGYN
Sbjct: 11  VGNLPGDIREHEIEDIFYK-YGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYN 70

Query: 336 FDGCRLR----------------------------------------------------- 363
            DGCRLR                                                     
Sbjct: 71  LDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRGL 130

[Close]

BLAST of Sgr021576 vs. TAIR 10
Match: AT1G09140.1 (SERINE-ARGININE PROTEIN 30 )

HSP 1 Score: 89.0 bits (219), Expect = 8.9e-18
Identity = 56/137 (40.88%), Postives = 67/137 (48.91%), Query Frame = 0


Query: 276 VVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYN 335
           V  L  +IRK +V  L ++ YG I+DI+LKIPP PP Y FVEFE+ RDA+DAI  RDGY+
Sbjct: 11  VGNLPGDIRKCEVEDLFYK-YGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYD 70

Query: 336 FDGCRLR--------------------------------------------------DHM 363
           FDGCRLR                                                  DHM
Sbjct: 71  FDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSASWQDLKDHM 130

[Close]

BLAST of Sgr021576 vs. TAIR 10
Match: AT1G09140.2 (SERINE-ARGININE PROTEIN 30 )

HSP 1 Score: 89.0 bits (219), Expect = 8.9e-18
Identity = 56/137 (40.88%), Postives = 67/137 (48.91%), Query Frame = 0


Query: 276 VVKLGEEIRKEDVRFLAFRLYGRILDIELKIPPHPPCYCFVEFENVRDAEDAIRARDGYN 335
           V  L  +IRK +V  L ++ YG I+DI+LKIPP PP Y FVEFE+ RDA+DAI  RDGY+
Sbjct: 11  VGNLPGDIRKCEVEDLFYK-YGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYD 70

Query: 336 FDGCRLR--------------------------------------------------DHM 363
           FDGCRLR                                                  DHM
Sbjct: 71  FDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSASWQDLKDHM 130

The following BLAST results are available for this feature:

BLAST of Sgr021576 vs. NCBI nr


Match Name	E-value	Identity	Description
GAU43666.1	2.1e-29	62.16	hypothetical protein TSUD_302290 [Trifolium subterraneum]	[more]
KAG6605812.1	1.1e-25	32.14	Serine/arginine-rich splicing factor SR34A, partial [Cucurbita argyrosperma subs...	[more]
KAF9671054.1	9.2e-25	58.56	hypothetical protein SADUNF_Sadunf12G0006900 [Salix dunnii]	[more]
PWA48404.1	1.3e-23	56.36	serine/arginine-rich splicing factor SR34A [Artemisia annua]	[more]
GFY81791.1	1.7e-23	52.42	SER/ARG-rich protein 34A [Actinidia rufa]	[more]

BLAST of Sgr021576 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2RVS6	3.8e-21	40.00	Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
Q9XFR5	1.3e-16	40.88	Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR3...	[more]
O22315	3.4e-14	47.87	Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR3...	[more]
F4JHI7	2.2e-13	46.74	Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
Q7SXP4	3.9e-10	48.65	Serine/arginine-rich splicing factor 1A OS=Danio rerio OX=7955 GN=srsf1a PE=2 SV...	[more]

BLAST of Sgr021576 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2Z6NIS3	1.0e-29	62.16	RRM domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_302290 P...	[more]
A0A2U1LHB7	6.4e-24	56.36	Serine/arginine-rich splicing factor SR34A OS=Artemisia annua OX=35608 GN=CTI12_...	[more]
A0A7J0E5K6	8.4e-24	52.42	SER/ARG-rich protein 34A OS=Actinidia rufa OX=165716 GN=Acr_02g0000310 PE=4 SV=1	[more]
A0A5J5AVN4	8.4e-24	50.00	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_031029 PE=4 SV=1	[more]
A0A2P2LQG4	1.1e-23	49.64	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]

BLAST of Sgr021576 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49430.1	2.7e-22	40.00	SER/ARG-rich protein 34A	[more]
AT3G49430.2	2.7e-22	40.00	SER/ARG-rich protein 34A	[more]
AT3G49430.3	2.7e-22	40.00	SER/ARG-rich protein 34A	[more]
AT1G09140.1	8.9e-18	40.88	SERINE-ARGININE PROTEIN 30	[more]
AT1G09140.2	8.9e-18	40.88	SERINE-ARGININE PROTEIN 30	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 273..342 e-value: 2.6E-4 score: 30.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 279..342 e-value: 3.4E-9 score: 36.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 272..348 score: 9.405087
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 268..370 e-value: 1.1E-10 score: 43.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..138
None	No IPR available	PANTHER	PTHR23147:SF63	SERINE/ARGININE-RICH SPLICING FACTOR SR34A	coord: 341..363 coord: 286..342
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 286..342
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 341..363
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 278..354

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr021576.1	Sgr021576.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding