Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCTTGGAGTGTTGAAGAGGAATTTTGAGGAGTTGAATGATATTAATGAGAAGCAAGAAACAAGAGTGCGTTACCATGAAACTAAAGTCCAAAGCATTGTCTTTGGCTACCTCATTTGGGGACGCTTGTTCTTCTTTGGTATCTCTCAGACTTCTTCGTCCTTCAAGTGCAATGATTGGTGGGTCGTTTTGGCTTTAAGTCTTTTGTGTACCTTCATCTACTTTTTGCTTTTCCTGGATGCTGTCACTATGTTATATTGGACCCAGTACCAGCTAGACATTACCCGCAAGGAACTAACTGAAATTTGCCAACAAATTTTGGTAGCCAAAAACCAAGATGATGTGGGTCTATCAATGGATGCTGGAGAATCTAGTGTTGGATTTGAATTTTCTTTCCATGAGAAGATGCTCATGCTTGATCAATTCAGAATTGTTGGGAGGAAAGTTTATATCTACTTCACTGCCTGTGCTTTGCTTGTTGTTACTGCTGTTGAATTGTATGCTTGTAAGTACTTGTTATGTAACTGA
mRNA sequence
ATGGCGCTTGGAGTGTTGAAGAGGAATTTTGAGGAGTTGAATGATATTAATGAGAAGCAAGAAACAAGAGTGCGTTACCATGAAACTAAAGTCCAAAGCATTGTCTTTGGCTACCTCATTTGGGGACGCTTGTTCTTCTTTGGTATCTCTCAGACTTCTTCGTCCTTCAAGTGCAATGATTGGTGGGTCGTTTTGGCTTTAAGTCTTTTGTGTACCTTCATCTACTTTTTGCTTTTCCTGGATGCTGTCACTATGTTATATTGGACCCAGTACCAGCTAGACATTACCCGCAAGGAACTAACTGAAATTTGCCAACAAATTTTGGTAGCCAAAAACCAAGATGATGTGGGTCTATCAATGGATGCTGGAGAATCTAGTGTTGGATTTGAATTTTCTTTCCATGAGAAGATGCTCATGCTTGATCAATTCAGAATTGTTGGGAGGAAAGTTTATATCTACTTCACTGCCTGTGCTTTGCTTGTTGTTACTGCTGTTGAATTGTATGCTTGTAAGTACTTGTTATGTAACTGA
Coding sequence (CDS)
ATGGCGCTTGGAGTGTTGAAGAGGAATTTTGAGGAGTTGAATGATATTAATGAGAAGCAAGAAACAAGAGTGCGTTACCATGAAACTAAAGTCCAAAGCATTGTCTTTGGCTACCTCATTTGGGGACGCTTGTTCTTCTTTGGTATCTCTCAGACTTCTTCGTCCTTCAAGTGCAATGATTGGTGGGTCGTTTTGGCTTTAAGTCTTTTGTGTACCTTCATCTACTTTTTGCTTTTCCTGGATGCTGTCACTATGTTATATTGGACCCAGTACCAGCTAGACATTACCCGCAAGGAACTAACTGAAATTTGCCAACAAATTTTGGTAGCCAAAAACCAAGATGATGTGGGTCTATCAATGGATGCTGGAGAATCTAGTGTTGGATTTGAATTTTCTTTCCATGAGAAGATGCTCATGCTTGATCAATTCAGAATTGTTGGGAGGAAAGTTTATATCTACTTCACTGCCTGTGCTTTGCTTGTTGTTACTGCTGTTGAATTGTATGCTTGTAAGTACTTGTTATGTAACTGA
Protein sequence
MALGVLKRNFEELNDINEKQETRVRYHETKVQSIVFGYLIWGRLFFFGISQTSSSFKCNDWWVVLALSLLCTFIYFLLFLDAVTMLYWTQYQLDITRKELTEICQQILVAKNQDDVGLSMDAGESSVGFEFSFHEKMLMLDQFRIVGRKVYIYFTACALLVVTAVELYACKYLLCN
Homology
BLAST of Sgr021171 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 276.2 bits (705), Expect = 2.0e-70
Identity = 142/176 (80.68%), Postives = 155/176 (88.07%), Query Frame = 0
Query: 1 MALGVLKRNFEELNDINEKQETRVRYHETKVQSIVFGYLIWGRLFFFGISQTSSSFKCND 60
MALG L+R FEEL DINEKQE+RVRY+ETKVQ+IVFGYLI+ RLFFFGISQTSSSF C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 61 WWVVLALSLLCTFIYFLLFLDAVTMLYWTQYQLDITRKELTEICQQILVAKNQDDVGLSM 120
WWV+LALSLLC+FIYFLLFLDAV ML+ TQYQLDI KEL E+ QQILV+KNQDDVGLSM
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 121 DAGESSVGFEFSFHEKMLMLDQFRIVGRKVYIYFTACALLVVTAVELYACKYLLCN 177
+ GESS GFEF FHEKMLMLD FRIVGRKVYIYFT ALL VTA+ELY KY+LCN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of Sgr021171 vs. NCBI nr
Match:
XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])
HSP 1 Score: 251.9 bits (642), Expect = 4.0e-63
Identity = 129/176 (73.30%), Postives = 147/176 (83.52%), Query Frame = 0
Query: 1 MALGVLKRNFEELNDINEKQETRVRYHETKVQSIVFGYLIWGRLFFFGISQTSSSFKCND 60
MA+G L+R F EL DINEKQE+RVRYHE K Q IV GYLI RLFFFGISQTSSS KC+D
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS-KCHD 60
Query: 61 WWVVLALSLLCTFIYFLLFLDAVTMLYWTQYQLDITRKELTEICQQILVAKNQDDVGLSM 120
WWV+L+LSLLC+F+YFLLFLDA T LY T+ QLD+ KEL E+CQQILVA+NQDDV L+M
Sbjct: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120
Query: 121 DAGESSVGFEFSFHEKMLMLDQFRIVGRKVYIYFTACALLVVTAVELYACKYLLCN 177
+ G+ S GFEF FHEKML+LD FR VGRKVYIYFT CAL+ VTA+ELY KYLLCN
Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of Sgr021171 vs. NCBI nr
Match:
KAA0042579.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05983.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 236.5 bits (602), Expect = 1.8e-58
Identity = 124/176 (70.45%), Postives = 141/176 (80.11%), Query Frame = 0
Query: 3 LGVLKRNFEELNDINEKQETRVRYHETKVQSIVFGYLIWGRLFFFGISQTSSSFKCNDWW 62
LG L+RNF L DIN+ QET +RY ETK+Q++V GYL WGRLFFFG+ S SFKC DWW
Sbjct: 47 LGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGV---SFSFKCKDWW 106
Query: 63 VVLALSLLCTFIYFLLFLDAVTMLYWTQYQLDITRKELTEICQQILVAKNQDDVGLSMDA 122
V+LAL+L TF YFLLF+DAV ML T QLDI RKEL EICQQILVA+NQD+VGLSM+A
Sbjct: 107 VILALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEA 166
Query: 123 GESSVGFEFSFHEKMLMLDQFRIV--GRKVYIYFTACALLVVTAVELYACKYLLCN 177
GE S GFE SFHE+M MLDQFR+V GRKVYIYF C LL +TA+ELYACK LLCN
Sbjct: 167 GEDSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219
BLAST of Sgr021171 vs. NCBI nr
Match:
KAG6579338.1 (hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 230.3 bits (586), Expect = 1.3e-56
Identity = 123/175 (70.29%), Postives = 141/175 (80.57%), Query Frame = 0
Query: 1 MALGVLKRNFEELNDINEKQETRVRYHETKVQSIVFGYLIWGRLFFFGISQTSSSFKCND 60
MA G LKR F+EL D+NEKQET+V YH+ KVQ+IVFGYLIW RLF +GISQ + SFKCN+
Sbjct: 1 MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQ-ALSFKCNN 60
Query: 61 WWVVLALSLLCTFIYFLLFLDAVTMLYWTQYQLDITRKELTEICQQILVAKNQDDVGLSM 120
WWV+LALSLL FIYFLLFLDA+TML+ QYQLDI KEL E CQQ L+ KN+DD+ L +
Sbjct: 61 WWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-V 120
Query: 121 DAGESSVGFEFSFHEKMLMLDQFRIVGRKVYIYFTACALLVVTAVELYACKYLLC 176
+AGES GFEF FH+KMLMLD IVGR VYIYF CALL V A+ELYA KYLLC
Sbjct: 121 EAGESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLC 173
BLAST of Sgr021171 vs. NCBI nr
Match:
KAG7016840.1 (hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 227.3 bits (578), Expect = 1.1e-55
Identity = 122/175 (69.71%), Postives = 140/175 (80.00%), Query Frame = 0
Query: 1 MALGVLKRNFEELNDINEKQETRVRYHETKVQSIVFGYLIWGRLFFFGISQTSSSFKCND 60
MA G LKR +EL D+NEKQET+V YH+ KVQ+IVFGYLIW RLFF+GISQ + SFKCN+
Sbjct: 36 MAHGELKRRIKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFFYGISQ-ALSFKCNN 95
Query: 61 WWVVLALSLLCTFIYFLLFLDAVTMLYWTQYQLDITRKELTEICQQILVAKNQDDVGLSM 120
WWV+LALSLL FIYFLLFLDA+TML+ QYQLDI KEL E CQQ L+ KN+DD+ L +
Sbjct: 96 WWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-V 155
Query: 121 DAGESSVGFEFSFHEKMLMLDQFRIVGRKVYIYFTACALLVVTAVELYACKYLLC 176
+AGES FEF FH+KMLMLD IVGR VYIYF CALL V A+ELYA KYLLC
Sbjct: 156 EAGESCDRFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLC 208
BLAST of Sgr021171 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 9.7e-71
Identity = 142/176 (80.68%), Postives = 155/176 (88.07%), Query Frame = 0
Query: 1 MALGVLKRNFEELNDINEKQETRVRYHETKVQSIVFGYLIWGRLFFFGISQTSSSFKCND 60
MALG L+R FEEL DINEKQE+RVRY+ETKVQ+IVFGYLI+ RLFFFGISQTSSSF C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 61 WWVVLALSLLCTFIYFLLFLDAVTMLYWTQYQLDITRKELTEICQQILVAKNQDDVGLSM 120
WWV+LALSLLC+FIYFLLFLDAV ML+ TQYQLDI KEL E+ QQILV+KNQDDVGLSM
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 121 DAGESSVGFEFSFHEKMLMLDQFRIVGRKVYIYFTACALLVVTAVELYACKYLLCN 177
+ GESS GFEF FHEKMLMLD FRIVGRKVYIYFT ALL VTA+ELY KY+LCN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of Sgr021171 vs. ExPASy TrEMBL
Match:
A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)
HSP 1 Score: 251.9 bits (642), Expect = 2.0e-63
Identity = 129/176 (73.30%), Postives = 147/176 (83.52%), Query Frame = 0
Query: 1 MALGVLKRNFEELNDINEKQETRVRYHETKVQSIVFGYLIWGRLFFFGISQTSSSFKCND 60
MA+G L+R F EL DINEKQE+RVRYHE K Q IV GYLI RLFFFGISQTSSS KC+D
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS-KCHD 60
Query: 61 WWVVLALSLLCTFIYFLLFLDAVTMLYWTQYQLDITRKELTEICQQILVAKNQDDVGLSM 120
WWV+L+LSLLC+F+YFLLFLDA T LY T+ QLD+ KEL E+CQQILVA+NQDDV L+M
Sbjct: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120
Query: 121 DAGESSVGFEFSFHEKMLMLDQFRIVGRKVYIYFTACALLVVTAVELYACKYLLCN 177
+ G+ S GFEF FHEKML+LD FR VGRKVYIYFT CAL+ VTA+ELY KYLLCN
Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of Sgr021171 vs. ExPASy TrEMBL
Match:
A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)
HSP 1 Score: 236.5 bits (602), Expect = 8.5e-59
Identity = 124/176 (70.45%), Postives = 141/176 (80.11%), Query Frame = 0
Query: 3 LGVLKRNFEELNDINEKQETRVRYHETKVQSIVFGYLIWGRLFFFGISQTSSSFKCNDWW 62
LG L+RNF L DIN+ QET +RY ETK+Q++V GYL WGRLFFFG+ S SFKC DWW
Sbjct: 47 LGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGV---SFSFKCKDWW 106
Query: 63 VVLALSLLCTFIYFLLFLDAVTMLYWTQYQLDITRKELTEICQQILVAKNQDDVGLSMDA 122
V+LAL+L TF YFLLF+DAV ML T QLDI RKEL EICQQILVA+NQD+VGLSM+A
Sbjct: 107 VILALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEA 166
Query: 123 GESSVGFEFSFHEKMLMLDQFRIV--GRKVYIYFTACALLVVTAVELYACKYLLCN 177
GE S GFE SFHE+M MLDQFR+V GRKVYIYF C LL +TA+ELYACK LLCN
Sbjct: 167 GEDSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219
BLAST of Sgr021171 vs. ExPASy TrEMBL
Match:
A0A0A0KJZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 1.7e-54
Identity = 120/176 (68.18%), Postives = 136/176 (77.27%), Query Frame = 0
Query: 3 LGVLKRNFEELNDINEKQETRVRYHETKVQSIVFGYLIWGRLFFFGISQTSSSFKCNDWW 62
LG L++NF L IN+ QET +RY ETK+Q+IV GYL WGRLFFFG S SFKC DWW
Sbjct: 81 LGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGF---SFSFKCKDWW 140
Query: 63 VVLALSLLCTFIYFLLFLDAVTMLYWTQYQLDITRKELTEICQQILVAKNQDDVGLSMDA 122
VVL+L+LL TF+Y LLF+DAV ML T QL I RKELTEICQQILVA+NQD V LSM+
Sbjct: 141 VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 200
Query: 123 GESSVGFEFSFHEKMLMLDQFRIV--GRKVYIYFTACALLVVTAVELYACKYLLCN 177
GE GFE SFHE+M MLDQF +V GRK YIYF CALLV+TA+ELYACK LLCN
Sbjct: 201 GECCDGFELSFHERMFMLDQFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 253
BLAST of Sgr021171 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 5.3e-53
Identity = 115/178 (64.61%), Postives = 137/178 (76.97%), Query Frame = 0
Query: 1 MALGVLKRNFEELNDINEKQETRVRYHETKVQSIVFGYLIWGRLFFFGISQTSSS-FKCN 60
M G LKRNFE L D+ EKQE+RV+YHE++ Q+I YLIWGRLFFF ISQTSSS KC
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 61 DWWVVLALSLLCTFIYFLLFLDAVTMLYWTQYQLDITRKELTEICQQILVAKNQ-DDVGL 120
DWW+VL LS+ C F+YFL FL+AVTMLY Q+Q+DI KE EICQQILVA++Q DDV L
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 121 SMDAGESSVGFEFSFHEKMLMLDQFRIVGRKVYIYFTACALLVVTAVELYACKYLLCN 177
+M+AG+SS GF+FSFH K+L FRIV RK YI T ALL VTA+ELYAC +L C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022157182.1 | 2.0e-70 | 80.68 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
XP_022157176.1 | 4.0e-63 | 73.30 | uncharacterized protein LOC111023953 isoform X2 [Momordica charantia] | [more] |
KAA0042579.1 | 1.8e-58 | 70.45 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
KAG6579338.1 | 1.3e-56 | 70.29 | hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7016840.1 | 1.1e-55 | 69.71 | hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DSQ0 | 9.7e-71 | 80.68 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DX74 | 2.0e-63 | 73.30 | uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A5A7TMJ1 | 8.5e-59 | 70.45 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A0A0KJZ3 | 1.7e-54 | 68.18 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1 | [more] |
A0A6J1DS87 | 5.3e-53 | 64.61 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |