Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTGGTGGGAAAATGTCTAAACCTGTCAATTCATAAACATTTTATGGCTTGCAACAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGTCCAGACACAATAGATGAACTTTTAGACAGACATGTGGTTAAGAGAGAAAATTCCTTTGATGATGAAGATGATGAATTGATAACTGAGCGACGACTCACCAGCACTCGACGCGAGGCTTTAAGTCTCTATCGAGACATCCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTTTCGAGGTGTGTTGTGGCGAGACGTTCTCAGAGAGAATGCCCGAAAGGAATTTGAGGAGGCCCGCTATGAGTCTGATCCAGAAATTGTGACCCGACTCCTTATTGCCGGGCGCGATGCAGTGCATTCTACTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAGGTGGTGGAGATCAACTTTGA
mRNA sequence
ATGAGGTTGGTGGGAAAATGTCTAAACCTGTCAATTCATAAACATTTTATGGCTTGCAACAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGTCCAGACACAATAGATGAACTTTTAGACAGACATGTGGTTAAGAGAGAAAATTCCTTTGATGATGAAGATGATGAATTGATAACTGAGCGACGACTCACCAGCACTCGACGCGAGGCTTTAAGTCTCTATCGAGACATCCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTTTCGAGGTGTGTTGTGGCGAGACGTTCTCAGAGAGAATGCCCGAAAGGAATTTGAGGAGGCCCGCTATGAGTCTGATCCAGAAATTGTGACCCGACTCCTTATTGCCGGGCGCGATGCAGTGCATTCTACTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAGGTGGTGGAGATCAACTTTGA
Coding sequence (CDS)
ATGAGGTTGGTGGGAAAATGTCTAAACCTGTCAATTCATAAACATTTTATGGCTTGCAACAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGTCCAGACACAATAGATGAACTTTTAGACAGACATGTGGTTAAGAGAGAAAATTCCTTTGATGATGAAGATGATGAATTGATAACTGAGCGACGACTCACCAGCACTCGACGCGAGGCTTTAAGTCTCTATCGAGACATCCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTTTCGAGGTGTGTTGTGGCGAGACGTTCTCAGAGAGAATGCCCGAAAGGAATTTGAGGAGGCCCGCTATGAGTCTGATCCAGAAATTGTGACCCGACTCCTTATTGCCGGGCGCGATGCAGTGCATTCTACTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAGGTGGTGGAGATCAACTTTGA
Protein sequence
MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELITERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVTRLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQL
Homology
BLAST of Sgr018521 vs. NCBI nr
Match:
XP_022144304.1 (uncharacterized protein LOC111014019 [Momordica charantia])
HSP 1 Score: 287.3 bits (734), Expect = 7.6e-74
Identity = 140/154 (90.91%), Postives = 147/154 (95.45%), Query Frame = 0
Query: 1 MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
+RLVGKCLNLSIHKHF+ACNKIGFHPRVLHNGPDTIDELLDRHVVK+E SF+DEDDELIT
Sbjct: 11 IRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELIT 70
Query: 61 ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
+R LTSTRREALSLYRDI+RATRFFMWPD RGVLWRDVLRENARKEFEEARYESDPE+VT
Sbjct: 71 QRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDVLRENARKEFEEARYESDPEVVT 130
Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQ 155
RLLI GRDAV S LDKLAEKQMQEIDKKQ GGDQ
Sbjct: 131 RLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ 164
BLAST of Sgr018521 vs. NCBI nr
Match:
XP_038884246.1 (uncharacterized protein LOC120075144 [Benincasa hispida])
HSP 1 Score: 280.8 bits (717), Expect = 7.1e-72
Identity = 137/155 (88.39%), Postives = 146/155 (94.19%), Query Frame = 0
Query: 1 MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
MRLVGKCLNLSIHK+F+ CNKIGFHPRVLHNGPDT+ ELLDRHVVK+E SFDDE+DELIT
Sbjct: 1 MRLVGKCLNLSIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKEKSFDDEEDELIT 60
Query: 61 ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
+RRLT+TRREALSLYRDILRATRFFMWPD RGVLWRDVLR+NARKEFE+ARYESDPEIVT
Sbjct: 61 QRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIVT 120
Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQL 156
RLLI GRDAV S LDKLAEKQMQEIDKKQ G DQL
Sbjct: 121 RLLIGGRDAVQSALDKLAEKQMQEIDKKQNGRDQL 155
BLAST of Sgr018521 vs. NCBI nr
Match:
XP_022961619.1 (uncharacterized protein LOC111462339 [Cucurbita moschata] >XP_022961620.1 uncharacterized protein LOC111462339 [Cucurbita moschata] >KAG6598519.1 hypothetical protein SDJN03_08297, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 265.8 bits (678), Expect = 2.4e-67
Identity = 128/154 (83.12%), Postives = 143/154 (92.86%), Query Frame = 0
Query: 1 MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
MRLV KC+ LS HK+F+ACNK+GFHPR+LHNGPDTIDELLDRHVVK+E SFDD+++ELIT
Sbjct: 3 MRLVEKCVKLSTHKNFLACNKVGFHPRLLHNGPDTIDELLDRHVVKKEKSFDDDEEELIT 62
Query: 61 ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
+RRLTSTRREALSLYRDILRATRFFMWPD RGVLWRDVLR+NARKEFE+AR+E+DPEIVT
Sbjct: 63 QRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEIVT 122
Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQ 155
RLLI GRDAV S LDKLAEKQ QEIDKKQ G D+
Sbjct: 123 RLLIGGRDAVQSALDKLAEKQRQEIDKKQSGRDR 156
BLAST of Sgr018521 vs. NCBI nr
Match:
KAG7029455.1 (hypothetical protein SDJN02_07794, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 265.4 bits (677), Expect = 3.1e-67
Identity = 128/152 (84.21%), Postives = 141/152 (92.76%), Query Frame = 0
Query: 1 MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
MRLV KC+ LS HK+F+ACNKIG+HPR LHNGPDTIDELLDRHVVK+E SFDD+++ELIT
Sbjct: 3 MRLVEKCVKLSTHKNFLACNKIGYHPRALHNGPDTIDELLDRHVVKKEKSFDDDEEELIT 62
Query: 61 ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
+RRLTSTRREALSLYRDILRATRFFMWPD RGVLWRDVLR+NARKEFE+AR+E+DPEIVT
Sbjct: 63 QRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEIVT 122
Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGG 153
RLLI GRDAV S LDKLAEKQ QEIDKKQ GG
Sbjct: 123 RLLIGGRDAVQSALDKLAEKQRQEIDKKQSGG 154
BLAST of Sgr018521 vs. NCBI nr
Match:
XP_031736624.1 (uncharacterized protein LOC101214249 [Cucumis sativus] >KGN62269.1 hypothetical protein Csa_018772 [Cucumis sativus])
HSP 1 Score: 265.0 bits (676), Expect = 4.1e-67
Identity = 132/156 (84.62%), Postives = 144/156 (92.31%), Query Frame = 0
Query: 1 MRLVGKCLNL-SIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELI 60
MRLVGK LNL SIHK+F+ C+KIGFHPRVLHNGPDT++ELLDRHVVK+E FDDEDD+LI
Sbjct: 3 MRLVGKYLNLSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLI 62
Query: 61 TERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIV 120
T+RRLT+TRREALSLYRDILRATRFFMWPD RGVLWRDVLRENARKEFE+AR ESDPE+V
Sbjct: 63 TQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPEMV 122
Query: 121 TRLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQL 156
TRLLI GRDAV S LDKLAEKQ +EIDKKQGG DQL
Sbjct: 123 TRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL 158
BLAST of Sgr018521 vs. ExPASy TrEMBL
Match:
A0A6J1CRY1 (uncharacterized protein LOC111014019 OS=Momordica charantia OX=3673 GN=LOC111014019 PE=4 SV=1)
HSP 1 Score: 287.3 bits (734), Expect = 3.7e-74
Identity = 140/154 (90.91%), Postives = 147/154 (95.45%), Query Frame = 0
Query: 1 MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
+RLVGKCLNLSIHKHF+ACNKIGFHPRVLHNGPDTIDELLDRHVVK+E SF+DEDDELIT
Sbjct: 11 IRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELIT 70
Query: 61 ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
+R LTSTRREALSLYRDI+RATRFFMWPD RGVLWRDVLRENARKEFEEARYESDPE+VT
Sbjct: 71 QRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDVLRENARKEFEEARYESDPEVVT 130
Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQ 155
RLLI GRDAV S LDKLAEKQMQEIDKKQ GGDQ
Sbjct: 131 RLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ 164
BLAST of Sgr018521 vs. ExPASy TrEMBL
Match:
A0A6J1HEL0 (uncharacterized protein LOC111462339 OS=Cucurbita moschata OX=3662 GN=LOC111462339 PE=4 SV=1)
HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67
Identity = 128/154 (83.12%), Postives = 143/154 (92.86%), Query Frame = 0
Query: 1 MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
MRLV KC+ LS HK+F+ACNK+GFHPR+LHNGPDTIDELLDRHVVK+E SFDD+++ELIT
Sbjct: 3 MRLVEKCVKLSTHKNFLACNKVGFHPRLLHNGPDTIDELLDRHVVKKEKSFDDDEEELIT 62
Query: 61 ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
+RRLTSTRREALSLYRDILRATRFFMWPD RGVLWRDVLR+NARKEFE+AR+E+DPEIVT
Sbjct: 63 QRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEIVT 122
Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQ 155
RLLI GRDAV S LDKLAEKQ QEIDKKQ G D+
Sbjct: 123 RLLIGGRDAVQSALDKLAEKQRQEIDKKQSGRDR 156
BLAST of Sgr018521 vs. ExPASy TrEMBL
Match:
A0A0A0LMK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346590 PE=4 SV=1)
HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 132/156 (84.62%), Postives = 144/156 (92.31%), Query Frame = 0
Query: 1 MRLVGKCLNL-SIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELI 60
MRLVGK LNL SIHK+F+ C+KIGFHPRVLHNGPDT++ELLDRHVVK+E FDDEDD+LI
Sbjct: 3 MRLVGKYLNLSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLI 62
Query: 61 TERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIV 120
T+RRLT+TRREALSLYRDILRATRFFMWPD RGVLWRDVLRENARKEFE+AR ESDPE+V
Sbjct: 63 TQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPEMV 122
Query: 121 TRLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQL 156
TRLLI GRDAV S LDKLAEKQ +EIDKKQGG DQL
Sbjct: 123 TRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL 158
BLAST of Sgr018521 vs. ExPASy TrEMBL
Match:
A0A6J1K786 (uncharacterized protein LOC111492289 OS=Cucurbita maxima OX=3661 GN=LOC111492289 PE=4 SV=1)
HSP 1 Score: 261.9 bits (668), Expect = 1.7e-66
Identity = 126/154 (81.82%), Postives = 141/154 (91.56%), Query Frame = 0
Query: 1 MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
MRLV KC+ LS HK+F+ACNK G+HPR LHNGPDTIDELLD HVVK+E SFDD+++ELIT
Sbjct: 3 MRLVEKCVKLSTHKNFLACNKFGYHPRALHNGPDTIDELLDIHVVKKEKSFDDDEEELIT 62
Query: 61 ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
+RRLTSTRRE+LSLYRDILRATRFFMWPD RGVLWRDVLR+NARKEFE+AR+E+DPEIVT
Sbjct: 63 QRRLTSTRRESLSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEIVT 122
Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQ 155
RLLI GRDAV S LDKLAEKQ QEIDKKQ GGD+
Sbjct: 123 RLLIGGRDAVQSALDKLAEKQRQEIDKKQSGGDR 156
BLAST of Sgr018521 vs. ExPASy TrEMBL
Match:
A0A5A7VCD6 (Complex 1 LYR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001620 PE=4 SV=1)
HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 128/156 (82.05%), Postives = 142/156 (91.03%), Query Frame = 0
Query: 1 MRLVGKCLNL-SIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELI 60
MRLVGK LNL SI K+F+ C+KIGFHPRVLHNGPDT++ELLDRHVVK+E S DD+ D+LI
Sbjct: 3 MRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLI 62
Query: 61 TERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIV 120
T+RRLTSTRREALSLYRDILRATRFFMWPD +GVLWRDVLR+NARKEFE+AR+ESDPEIV
Sbjct: 63 TQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRDVLRQNARKEFEDARFESDPEIV 122
Query: 121 TRLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQL 156
TRLLI GRDAV S LDKLAEKQ +EIDKKQ G DQL
Sbjct: 123 TRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL 158
BLAST of Sgr018521 vs. TAIR 10
Match:
AT1G76060.1 (LYR family of Fe/S cluster biogenesis protein )
HSP 1 Score: 172.6 bits (436), Expect = 2.6e-43
Identity = 87/126 (69.05%), Postives = 102/126 (80.95%), Query Frame = 0
Query: 27 RVLHNGPDTIDELLDRHVVKRENSFDDEDD-ELITERRLTSTRREALSLYRDILRATRFF 86
R LH GPDT++ELL+RH+ K+E D D+ E + RRLTSTRREALSLYRDILRATRFF
Sbjct: 29 RFLHEGPDTVEELLERHLAKKEKPIIDHDEAEFLNRRRLTSTRREALSLYRDILRATRFF 88
Query: 87 MWPDFRGVLWRDVLRENARKEFEEARYESDPEIVTRLLIAGRDAVHSTLDKLAEKQMQEI 146
W D RG LWRDVLRENARKEFE AR+E+DPE++TRLLI G DAV S LDKLAEKQ + I
Sbjct: 89 TWIDSRGNLWRDVLRENARKEFEAARFETDPEVITRLLIGGSDAVSSALDKLAEKQREMI 148
Query: 147 DKKQGG 152
+K++ G
Sbjct: 149 EKQRRG 154
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022144304.1 | 7.6e-74 | 90.91 | uncharacterized protein LOC111014019 [Momordica charantia] | [more] |
XP_038884246.1 | 7.1e-72 | 88.39 | uncharacterized protein LOC120075144 [Benincasa hispida] | [more] |
XP_022961619.1 | 2.4e-67 | 83.12 | uncharacterized protein LOC111462339 [Cucurbita moschata] >XP_022961620.1 unchar... | [more] |
KAG7029455.1 | 3.1e-67 | 84.21 | hypothetical protein SDJN02_07794, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_031736624.1 | 4.1e-67 | 84.62 | uncharacterized protein LOC101214249 [Cucumis sativus] >KGN62269.1 hypothetical ... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CRY1 | 3.7e-74 | 90.91 | uncharacterized protein LOC111014019 OS=Momordica charantia OX=3673 GN=LOC111014... | [more] |
A0A6J1HEL0 | 1.2e-67 | 83.12 | uncharacterized protein LOC111462339 OS=Cucurbita moschata OX=3662 GN=LOC1114623... | [more] |
A0A0A0LMK5 | 2.0e-67 | 84.62 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346590 PE=4 SV=1 | [more] |
A0A6J1K786 | 1.7e-66 | 81.82 | uncharacterized protein LOC111492289 OS=Cucurbita maxima OX=3661 GN=LOC111492289... | [more] |
A0A5A7VCD6 | 1.6e-64 | 82.05 | Complex 1 LYR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82... | [more] |
Match Name | E-value | Identity | Description | |
AT1G76060.1 | 2.6e-43 | 69.05 | LYR family of Fe/S cluster biogenesis protein | [more] |