Sgr018521 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr018521
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Complex 1 LYR protein
Location	tig00153204: 974983 .. 975450 (+)
RNA-Seq Expression	Sgr018521
Synteny	Sgr018521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTTGGTGGGAAAATGTCTAAACCTGTCAATTCATAAACATTTTATGGCTTGCAACAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGTCCAGACACAATAGATGAACTTTTAGACAGACATGTGGTTAAGAGAGAAAATTCCTTTGATGATGAAGATGATGAATTGATAACTGAGCGACGACTCACCAGCACTCGACGCGAGGCTTTAAGTCTCTATCGAGACATCCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTTTCGAGGTGTGTTGTGGCGAGACGTTCTCAGAGAGAATGCCCGAAAGGAATTTGAGGAGGCCCGCTATGAGTCTGATCCAGAAATTGTGACCCGACTCCTTATTGCCGGGCGCGATGCAGTGCATTCTACTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAGGTGGTGGAGATCAACTTTGA

mRNA sequence

ATGAGGTTGGTGGGAAAATGTCTAAACCTGTCAATTCATAAACATTTTATGGCTTGCAACAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGTCCAGACACAATAGATGAACTTTTAGACAGACATGTGGTTAAGAGAGAAAATTCCTTTGATGATGAAGATGATGAATTGATAACTGAGCGACGACTCACCAGCACTCGACGCGAGGCTTTAAGTCTCTATCGAGACATCCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTTTCGAGGTGTGTTGTGGCGAGACGTTCTCAGAGAGAATGCCCGAAAGGAATTTGAGGAGGCCCGCTATGAGTCTGATCCAGAAATTGTGACCCGACTCCTTATTGCCGGGCGCGATGCAGTGCATTCTACTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAGGTGGTGGAGATCAACTTTGA

Coding sequence (CDS)

ATGAGGTTGGTGGGAAAATGTCTAAACCTGTCAATTCATAAACATTTTATGGCTTGCAACAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGTCCAGACACAATAGATGAACTTTTAGACAGACATGTGGTTAAGAGAGAAAATTCCTTTGATGATGAAGATGATGAATTGATAACTGAGCGACGACTCACCAGCACTCGACGCGAGGCTTTAAGTCTCTATCGAGACATCCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTTTCGAGGTGTGTTGTGGCGAGACGTTCTCAGAGAGAATGCCCGAAAGGAATTTGAGGAGGCCCGCTATGAGTCTGATCCAGAAATTGTGACCCGACTCCTTATTGCCGGGCGCGATGCAGTGCATTCTACTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAGGTGGTGGAGATCAACTTTGA

Protein sequence

MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELITERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVTRLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQL

Homology

[Close]

BLAST of Sgr018521 vs. NCBI nr
Match: XP_022144304.1 (uncharacterized protein LOC111014019 [Momordica charantia])

HSP 1 Score: 287.3 bits (734), Expect = 7.6e-74
Identity = 140/154 (90.91%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
           +RLVGKCLNLSIHKHF+ACNKIGFHPRVLHNGPDTIDELLDRHVVK+E SF+DEDDELIT
Sbjct: 11  IRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELIT 70

Query: 61  ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
           +R LTSTRREALSLYRDI+RATRFFMWPD RGVLWRDVLRENARKEFEEARYESDPE+VT
Sbjct: 71  QRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDVLRENARKEFEEARYESDPEVVT 130

Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQ 155
           RLLI GRDAV S LDKLAEKQMQEIDKKQ GGDQ
Sbjct: 131 RLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ 164

[Close]

BLAST of Sgr018521 vs. NCBI nr
Match: XP_038884246.1 (uncharacterized protein LOC120075144 [Benincasa hispida])

HSP 1 Score: 280.8 bits (717), Expect = 7.1e-72
Identity = 137/155 (88.39%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
           MRLVGKCLNLSIHK+F+ CNKIGFHPRVLHNGPDT+ ELLDRHVVK+E SFDDE+DELIT
Sbjct: 1   MRLVGKCLNLSIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKEKSFDDEEDELIT 60

Query: 61  ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
           +RRLT+TRREALSLYRDILRATRFFMWPD RGVLWRDVLR+NARKEFE+ARYESDPEIVT
Sbjct: 61  QRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIVT 120

Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQL 156
           RLLI GRDAV S LDKLAEKQMQEIDKKQ G DQL
Sbjct: 121 RLLIGGRDAVQSALDKLAEKQMQEIDKKQNGRDQL 155

[Close]

BLAST of Sgr018521 vs. NCBI nr
Match: XP_022961619.1 (uncharacterized protein LOC111462339 [Cucurbita moschata] >XP_022961620.1 uncharacterized protein LOC111462339 [Cucurbita moschata] >KAG6598519.1 hypothetical protein SDJN03_08297, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.8 bits (678), Expect = 2.4e-67
Identity = 128/154 (83.12%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 1   MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
           MRLV KC+ LS HK+F+ACNK+GFHPR+LHNGPDTIDELLDRHVVK+E SFDD+++ELIT
Sbjct: 3   MRLVEKCVKLSTHKNFLACNKVGFHPRLLHNGPDTIDELLDRHVVKKEKSFDDDEEELIT 62

Query: 61  ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
           +RRLTSTRREALSLYRDILRATRFFMWPD RGVLWRDVLR+NARKEFE+AR+E+DPEIVT
Sbjct: 63  QRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEIVT 122

Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQ 155
           RLLI GRDAV S LDKLAEKQ QEIDKKQ G D+
Sbjct: 123 RLLIGGRDAVQSALDKLAEKQRQEIDKKQSGRDR 156

[Close]

BLAST of Sgr018521 vs. NCBI nr
Match: KAG7029455.1 (hypothetical protein SDJN02_07794, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.4 bits (677), Expect = 3.1e-67
Identity = 128/152 (84.21%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
           MRLV KC+ LS HK+F+ACNKIG+HPR LHNGPDTIDELLDRHVVK+E SFDD+++ELIT
Sbjct: 3   MRLVEKCVKLSTHKNFLACNKIGYHPRALHNGPDTIDELLDRHVVKKEKSFDDDEEELIT 62

Query: 61  ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
           +RRLTSTRREALSLYRDILRATRFFMWPD RGVLWRDVLR+NARKEFE+AR+E+DPEIVT
Sbjct: 63  QRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEIVT 122

Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGG 153
           RLLI GRDAV S LDKLAEKQ QEIDKKQ GG
Sbjct: 123 RLLIGGRDAVQSALDKLAEKQRQEIDKKQSGG 154

[Close]

BLAST of Sgr018521 vs. NCBI nr
Match: XP_031736624.1 (uncharacterized protein LOC101214249 [Cucumis sativus] >KGN62269.1 hypothetical protein Csa_018772 [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 4.1e-67
Identity = 132/156 (84.62%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MRLVGKCLNL-SIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELI 60
           MRLVGK LNL SIHK+F+ C+KIGFHPRVLHNGPDT++ELLDRHVVK+E  FDDEDD+LI
Sbjct: 3   MRLVGKYLNLSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLI 62

Query: 61  TERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIV 120
           T+RRLT+TRREALSLYRDILRATRFFMWPD RGVLWRDVLRENARKEFE+AR ESDPE+V
Sbjct: 63  TQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPEMV 122

Query: 121 TRLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQL 156
           TRLLI GRDAV S LDKLAEKQ +EIDKKQGG DQL
Sbjct: 123 TRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL 158

[Close]

BLAST of Sgr018521 vs. ExPASy TrEMBL
Match: A0A6J1CRY1 (uncharacterized protein LOC111014019 OS=Momordica charantia OX=3673 GN=LOC111014019 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.7e-74
Identity = 140/154 (90.91%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
           +RLVGKCLNLSIHKHF+ACNKIGFHPRVLHNGPDTIDELLDRHVVK+E SF+DEDDELIT
Sbjct: 11  IRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELIT 70

Query: 61  ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
           +R LTSTRREALSLYRDI+RATRFFMWPD RGVLWRDVLRENARKEFEEARYESDPE+VT
Sbjct: 71  QRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDVLRENARKEFEEARYESDPEVVT 130

Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQ 155
           RLLI GRDAV S LDKLAEKQMQEIDKKQ GGDQ
Sbjct: 131 RLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ 164

[Close]

BLAST of Sgr018521 vs. ExPASy TrEMBL
Match: A0A6J1HEL0 (uncharacterized protein LOC111462339 OS=Cucurbita moschata OX=3662 GN=LOC111462339 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67
Identity = 128/154 (83.12%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 1   MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
           MRLV KC+ LS HK+F+ACNK+GFHPR+LHNGPDTIDELLDRHVVK+E SFDD+++ELIT
Sbjct: 3   MRLVEKCVKLSTHKNFLACNKVGFHPRLLHNGPDTIDELLDRHVVKKEKSFDDDEEELIT 62

Query: 61  ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
           +RRLTSTRREALSLYRDILRATRFFMWPD RGVLWRDVLR+NARKEFE+AR+E+DPEIVT
Sbjct: 63  QRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEIVT 122

Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQ 155
           RLLI GRDAV S LDKLAEKQ QEIDKKQ G D+
Sbjct: 123 RLLIGGRDAVQSALDKLAEKQRQEIDKKQSGRDR 156

[Close]

BLAST of Sgr018521 vs. ExPASy TrEMBL
Match: A0A0A0LMK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346590 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 132/156 (84.62%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MRLVGKCLNL-SIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELI 60
           MRLVGK LNL SIHK+F+ C+KIGFHPRVLHNGPDT++ELLDRHVVK+E  FDDEDD+LI
Sbjct: 3   MRLVGKYLNLSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLI 62

Query: 61  TERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIV 120
           T+RRLT+TRREALSLYRDILRATRFFMWPD RGVLWRDVLRENARKEFE+AR ESDPE+V
Sbjct: 63  TQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPEMV 122

Query: 121 TRLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQL 156
           TRLLI GRDAV S LDKLAEKQ +EIDKKQGG DQL
Sbjct: 123 TRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL 158

[Close]

BLAST of Sgr018521 vs. ExPASy TrEMBL
Match: A0A6J1K786 (uncharacterized protein LOC111492289 OS=Cucurbita maxima OX=3661 GN=LOC111492289 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.7e-66
Identity = 126/154 (81.82%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 1   MRLVGKCLNLSIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELIT 60
           MRLV KC+ LS HK+F+ACNK G+HPR LHNGPDTIDELLD HVVK+E SFDD+++ELIT
Sbjct: 3   MRLVEKCVKLSTHKNFLACNKFGYHPRALHNGPDTIDELLDIHVVKKEKSFDDDEEELIT 62

Query: 61  ERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIVT 120
           +RRLTSTRRE+LSLYRDILRATRFFMWPD RGVLWRDVLR+NARKEFE+AR+E+DPEIVT
Sbjct: 63  QRRLTSTRRESLSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEIVT 122

Query: 121 RLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQ 155
           RLLI GRDAV S LDKLAEKQ QEIDKKQ GGD+
Sbjct: 123 RLLIGGRDAVQSALDKLAEKQRQEIDKKQSGGDR 156

[Close]

BLAST of Sgr018521 vs. ExPASy TrEMBL
Match: A0A5A7VCD6 (Complex 1 LYR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001620 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 128/156 (82.05%), Postives = 142/156 (91.03%), Query Frame = 0


Query: 1   MRLVGKCLNL-SIHKHFMACNKIGFHPRVLHNGPDTIDELLDRHVVKRENSFDDEDDELI 60
           MRLVGK LNL SI K+F+ C+KIGFHPRVLHNGPDT++ELLDRHVVK+E S DD+ D+LI
Sbjct: 3   MRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLI 62

Query: 61  TERRLTSTRREALSLYRDILRATRFFMWPDFRGVLWRDVLRENARKEFEEARYESDPEIV 120
           T+RRLTSTRREALSLYRDILRATRFFMWPD +GVLWRDVLR+NARKEFE+AR+ESDPEIV
Sbjct: 63  TQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRDVLRQNARKEFEDARFESDPEIV 122

Query: 121 TRLLIAGRDAVHSTLDKLAEKQMQEIDKKQGGGDQL 156
           TRLLI GRDAV S LDKLAEKQ +EIDKKQ G DQL
Sbjct: 123 TRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL 158

[Close]

BLAST of Sgr018521 vs. TAIR 10
Match: AT1G76060.1 (LYR family of Fe/S cluster biogenesis protein )

HSP 1 Score: 172.6 bits (436), Expect = 2.6e-43
Identity = 87/126 (69.05%), Postives = 102/126 (80.95%), Query Frame = 0


Query: 27  RVLHNGPDTIDELLDRHVVKRENSFDDEDD-ELITERRLTSTRREALSLYRDILRATRFF 86
           R LH GPDT++ELL+RH+ K+E    D D+ E +  RRLTSTRREALSLYRDILRATRFF
Sbjct: 29  RFLHEGPDTVEELLERHLAKKEKPIIDHDEAEFLNRRRLTSTRREALSLYRDILRATRFF 88

Query: 87  MWPDFRGVLWRDVLRENARKEFEEARYESDPEIVTRLLIAGRDAVHSTLDKLAEKQMQEI 146
            W D RG LWRDVLRENARKEFE AR+E+DPE++TRLLI G DAV S LDKLAEKQ + I
Sbjct: 89  TWIDSRGNLWRDVLRENARKEFEAARFETDPEVITRLLIGGSDAVSSALDKLAEKQREMI 148

Query: 147 DKKQGG 152
           +K++ G
Sbjct: 149 EKQRRG 154

The following BLAST results are available for this feature:

BLAST of Sgr018521 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144304.1	7.6e-74	90.91	uncharacterized protein LOC111014019 [Momordica charantia]	[more]
XP_038884246.1	7.1e-72	88.39	uncharacterized protein LOC120075144 [Benincasa hispida]	[more]
XP_022961619.1	2.4e-67	83.12	uncharacterized protein LOC111462339 [Cucurbita moschata] >XP_022961620.1 unchar...	[more]
KAG7029455.1	3.1e-67	84.21	hypothetical protein SDJN02_07794, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_031736624.1	4.1e-67	84.62	uncharacterized protein LOC101214249 [Cucumis sativus] >KGN62269.1 hypothetical ...	[more]

BLAST of Sgr018521 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr018521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRY1	3.7e-74	90.91	uncharacterized protein LOC111014019 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1HEL0	1.2e-67	83.12	uncharacterized protein LOC111462339 OS=Cucurbita moschata OX=3662 GN=LOC1114623...	[more]
A0A0A0LMK5	2.0e-67	84.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346590 PE=4 SV=1	[more]
A0A6J1K786	1.7e-66	81.82	uncharacterized protein LOC111492289 OS=Cucurbita maxima OX=3661 GN=LOC111492289...	[more]
A0A5A7VCD6	1.6e-64	82.05	Complex 1 LYR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]

BLAST of Sgr018521 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76060.1	2.6e-43	69.05	LYR family of Fe/S cluster biogenesis protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 69..129 e-value: 1.2E-12 score: 47.7
None	No IPR available	PANTHER	PTHR47484	COMPLEX 1 PROTEIN CONTAINING PROTEIN, EXPRESSED	coord: 5..153
None	No IPR available	CDD	cd20267	Complex1_LYR_LYRM7	coord: 71..144 e-value: 6.22529E-16 score: 66.0479

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr018521.1	Sgr018521.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032981	mitochondrial respiratory chain complex I assembly
cellular_component	GO:0005759	mitochondrial matrix