Sgr017913 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr017913
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Cleavage and polyadenylation specificity factor subunit 6
Location	tig00153057: 441960 .. 443812 (-)
RNA-Seq Expression	Sgr017913
Synteny	Sgr017913

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGTTAACCCAGCGCAAGTTACCTATGAAGTTGATGAAACGAAAATTCCAGGATATCCCAGCGCGTTTTCCAGATTAGGGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGCACTTGTTCCTTAATTGGAGTGCGAGCGATCTTTGAACACTATCTTCTTTTGCTTACTCTGTATCTTGTAAGTGCTTCCATCGACTTTGCGATGTTTCTTGCATTTAATTTCTGAAAGATTATACTTTTGAATGAATAGCGAAAAAACCTTTGCGGGGGAAGTGAAAGAAGCTTAGAGATGGATGAAGGTGAGAGAGGGTTTGGAGAGGGTGTGGATCAGATAGAACAGTTTCATCGAAATGAGGCAATTTCTGCTGTTGCTGAAGAGGGTTTCTTAGGCGAAGATGAAGATGAATACGAGGACCTCTACAACGATGTTAATGTCGGGGAGGGGTTTCTTCAGTCTTTGAGGAAGAACGATGATTTAGGACTTAAGAGGGAGGAGGAGCCGAAGATTGAGTCTACACCTGTAGCACCCAACTTGGGTGCTTCGACACCCGGTGTTGGCAGTGCTGCGGCTGAAGTTACTGGTCTAGGAGATGGTGGGCCTAGGGTTTCGGAGAGAGTAACCGAGATTTACAGCCAGGTTCCAGATTTAAGAACGAATGAGATAGCTGTGAGAGGTGGGGCGGGATCGGGGCCGCCGGTGGGTGGTGGGGGCGGGATTAGGGTTGAATTGGGGCAAGGGAGTAAAATCAATGAGTTAGAGGAGCGAAGTAGTAATAACGTAGTTGGGCATCCAGGTCCGCAACAGCAACAGCACCACCACCAACCACCTCACGGCGGAGTTTTAGGAAATGCTGGGAATGTAGAAAATGAAGGTTTGCTAAGGCAAGGCGGTGGAGTGAATGTAAACGGGGTTGGTGGGAATGGGTATGGTAATGTTGGGAGTGGAGGGGGAGGTGGCGGTGGGACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAACTCTGTAAGTATGGTCCGGTGAAGGAGGTCAAGTTCTTTGACGAGAAAGCTAGTGGGAAGTCAAAAGGCTATTGTCAGGTTGAATTTTATGATCCATCTGCTGCCACAGCTTGCAAGGAGGGTATGAATGGGCATGATTTTAATGGACGGCCATGTGTTGTTGCCTATGCATCACCATTTAGTGTTAAGAGGATGGGAGAAGCCCAAGTAAATAGGAACCAACAGATGTCCCAAGCTGCTAATACTCAAGGAAGAAGAGGTCCTAATGATGCTGCAGGTAAAATTGGTGGAAGTAACATTGCAACGGGTGGTAATTATCAAGGTGGTGATAACAGTAGAGGTTCTGGGAGAGGTAGTTGGGGTAGAGGTAGCGCACATGGAATGGGAGGTAGAGGACCAGCTGGCCCAATGAGGAATAGGGGTGGTGGGATGGGTGGCAGAGGTATAATGGGGAATGGTGGAAATGGATTTGGCCAAGGGATTGGTGCCACCCCTCCTTTGTTGCATCCTCAGTCAATGATGGGTCAAGGTTTTGATCCAGCTTTTGGTGCACCTATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCTGCTCCCCATTTTTCTGGAATTTTATCTTCATTTCCACCTGTTGGGGGTGTTGGTCTTCCTGGAGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGACTGGAATGGGAATGATGCCAACATCGGGTGTTGATGGGCCTAGTATGGGAATGTGGTCTGATCCTAGTATGGGTGGATGGGGCAGTGAAGAGCATGGTGGAGGTAG

mRNA sequence

ATGACAGTTAACCCAGCGCAAGTTACCTATGAAGTTGATGAAACGAAAATTCCAGGATATCCCAGCGCGTTTTCCAGATTAGGGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGCACTTGTTCCTTAATTGGAGTGCGAGCGATCTTTGAACACTATCTTCTTTTGCTTACTCTGTATCTTCGAAAAAACCTTTGCGGGGGAAGTGAAAGAAGCTTAGAGATGGATGAAGGTGAGAGAGGGTTTGGAGAGGGTGTGGATCAGATAGAACAGTTTCATCGAAATGAGGCAATTTCTGCTGTTGCTGAAGAGGGTTTCTTAGGCGAAGATGAAGATGAATACGAGGACCTCTACAACGATGTTAATGTCGGGGAGGGGTTTCTTCAGTCTTTGAGGAAGAACGATGATTTAGGACTTAAGAGGGAGGAGGAGCCGAAGATTGAGTCTACACCTGTAGCACCCAACTTGGGTGCTTCGACACCCGGTGTTGGCAGTGCTGCGGCTGAAGTTACTGGTCTAGGAGATGGTGGGCCTAGGGTTTCGGAGAGAGTAACCGAGATTTACAGCCAGGTTCCAGATTTAAGAACGAATGAGATAGCTGTGAGAGGTGGGGCGGGATCGGGGCCGCCGGTGGGTGGTGGGGGCGGGATTAGGGTTGAATTGGGGCAAGGGAGTAAAATCAATGAGTTAGAGGAGCGAAGTAGTAATAACGTAGTTGGGCATCCAGGTCCGCAACAGCAACAGCACCACCACCAACCACCTCACGGCGGAGTTTTAGGAAATGCTGGGAATGTAGAAAATGAAGGTTTGCTAAGGCAAGGCGGTGGAGTGAATGTAAACGGGGTTGGTGGGAATGGGTATGGTAATGTTGGGAGTGGAGGGGGAGGTGGCGGTGGGACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAACTCTGTAAGTATGGTCCGGTGAAGGAGGTCAAGTTCTTTGACGAGAAAGCTAGTGGGAAGTCAAAAGGCTATTGTCAGGTTGAATTTTATGATCCATCTGCTGCCACAGCTTGCAAGGAGGGTATGAATGGGCATGATTTTAATGGACGGCCATGTGTTGTTGCCTATGCATCACCATTTAGTGTTAAGAGGATGGGAGAAGCCCAAGTAAATAGGAACCAACAGATGTCCCAAGCTGCTAATACTCAAGGAAGAAGAGGTCCTAATGATGCTGCAGGTAAAATTGGTGGAAGTAACATTGCAACGGGTGGTAATTATCAAGGTGGTGATAACAGTAGAGGTTCTGGGAGAGGTAGTTGGGGTAGAGGTAGCGCACATGGAATGGGAGGTAGAGGACCAGCTGGCCCAATGAGGAATAGGGGTGGTGGGATGGGTGGCAGAGGTATAATGGGGAATGGTGGAAATGGATTTGGCCAAGGGATTGGTGCCACCCCTCCTTTGTTGCATCCTCAGTCAATGATGGGTCAAGGTTTTGATCCAGCTTTTGGTGCACCTATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCTGCTCCCCATTTTTCTGGAATTTTATCTTCATTTCCACCTGTTGGGGGTGTTGGTCTTCCTGGAGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGACTGGAATGGGAATGATGCCAACATCGGGTGTTGATGGGCCTACATGGTGGAGGTAG

Coding sequence (CDS)

ATGACAGTTAACCCAGCGCAAGTTACCTATGAAGTTGATGAAACGAAAATTCCAGGATATCCCAGCGCGTTTTCCAGATTAGGGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGCACTTGTTCCTTAATTGGAGTGCGAGCGATCTTTGAACACTATCTTCTTTTGCTTACTCTGTATCTTCGAAAAAACCTTTGCGGGGGAAGTGAAAGAAGCTTAGAGATGGATGAAGGTGAGAGAGGGTTTGGAGAGGGTGTGGATCAGATAGAACAGTTTCATCGAAATGAGGCAATTTCTGCTGTTGCTGAAGAGGGTTTCTTAGGCGAAGATGAAGATGAATACGAGGACCTCTACAACGATGTTAATGTCGGGGAGGGGTTTCTTCAGTCTTTGAGGAAGAACGATGATTTAGGACTTAAGAGGGAGGAGGAGCCGAAGATTGAGTCTACACCTGTAGCACCCAACTTGGGTGCTTCGACACCCGGTGTTGGCAGTGCTGCGGCTGAAGTTACTGGTCTAGGAGATGGTGGGCCTAGGGTTTCGGAGAGAGTAACCGAGATTTACAGCCAGGTTCCAGATTTAAGAACGAATGAGATAGCTGTGAGAGGTGGGGCGGGATCGGGGCCGCCGGTGGGTGGTGGGGGCGGGATTAGGGTTGAATTGGGGCAAGGGAGTAAAATCAATGAGTTAGAGGAGCGAAGTAGTAATAACGTAGTTGGGCATCCAGGTCCGCAACAGCAACAGCACCACCACCAACCACCTCACGGCGGAGTTTTAGGAAATGCTGGGAATGTAGAAAATGAAGGTTTGCTAAGGCAAGGCGGTGGAGTGAATGTAAACGGGGTTGGTGGGAATGGGTATGGTAATGTTGGGAGTGGAGGGGGAGGTGGCGGTGGGACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAACTCTGTAAGTATGGTCCGGTGAAGGAGGTCAAGTTCTTTGACGAGAAAGCTAGTGGGAAGTCAAAAGGCTATTGTCAGGTTGAATTTTATGATCCATCTGCTGCCACAGCTTGCAAGGAGGGTATGAATGGGCATGATTTTAATGGACGGCCATGTGTTGTTGCCTATGCATCACCATTTAGTGTTAAGAGGATGGGAGAAGCCCAAGTAAATAGGAACCAACAGATGTCCCAAGCTGCTAATACTCAAGGAAGAAGAGGTCCTAATGATGCTGCAGGTAAAATTGGTGGAAGTAACATTGCAACGGGTGGTAATTATCAAGGTGGTGATAACAGTAGAGGTTCTGGGAGAGGTAGTTGGGGTAGAGGTAGCGCACATGGAATGGGAGGTAGAGGACCAGCTGGCCCAATGAGGAATAGGGGTGGTGGGATGGGTGGCAGAGGTATAATGGGGAATGGTGGAAATGGATTTGGCCAAGGGATTGGTGCCACCCCTCCTTTGTTGCATCCTCAGTCAATGATGGGTCAAGGTTTTGATCCAGCTTTTGGTGCACCTATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCTGCTCCCCATTTTTCTGGAATTTTATCTTCATTTCCACCTGTTGGGGGTGTTGGTCTTCCTGGAGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGACTGGAATGGGAATGATGCCAACATCGGGTGTTGATGGGCCTACATGGTGGAGGTAG

Protein sequence

MTVNPAQVTYEVDETKIPGYPSAFSRLGFLSLSLSLSLSLFCTCSLIGVRAIFEHYLLLLTLYLRKNLCGGSERSLEMDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGLKREEEPKIESTPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPDLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQQQQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMTGMGMMPTSGVDGPTWWR

Homology

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BLAST of Sgr017913 vs. NCBI nr
Match: XP_038897335.1 (cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispida] >XP_038897338.1 cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispida])

HSP 1 Score: 843.6 bits (2178), Expect = 1.0e-240
Identity = 434/506 (85.77%), Postives = 456/506 (90.12%), Query Frame = 0


Query: 78  MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
           MDE E GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDESEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPD 197
           DDLG K  EEPK+E   P  P+ GAS PGVG  A EV GLGDGG  VSERVTE Y+Q+PD
Sbjct: 61  DDLGFK-TEEPKMEPPAPAPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIPD 120

Query: 198 LRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQQQ------ 257
           +R NE+A+RGGAG GPPVGGGGGIRVELGQGSK NELEERS+NN+  H  PQQQ      
Sbjct: 121 IRANEMAIRGGAGPGPPVGGGGGIRVELGQGSKTNELEERSNNNIAAHQAPQQQQPQLQA 180

Query: 258 ----QHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILF 317
               QHHHQPP  GVLGN G+VENEGLLRQGGGVNVNGVGGNG+GN+GS GGGGGGTILF
Sbjct: 181 QPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILF 240

Query: 318 VGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNG 377
           VGDLHWWTTDAELE ELCKYGP+KEVKF+DEKASGKSKGYCQVEFYDPSAATACKEGMNG
Sbjct: 241 VGDLHWWTTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNG 300

Query: 378 HDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGG 437
           H FNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQA N Q RRGPNDA GKIGGSNIATGG
Sbjct: 301 HIFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPNDAVGKIGGSNIATGG 360

Query: 438 NYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGAT 497
           NYQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMR+RGGGMGGRGIMGNGGNGFGQGIGA 
Sbjct: 361 NYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGAA 420

Query: 498 PPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPH 557
           PPLLHPQSMM QGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSFPPVGGVGLPGVAPH
Sbjct: 421 PPLLHPQSMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPH 480

Query: 558 VNPAFFGRGMPMTGMGMMPTSGVDGP 573
           VNPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 VNPAFFGRGMPMNGMGMMPTSGVDGP 505

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BLAST of Sgr017913 vs. NCBI nr
Match: XP_038897113.1 (uncharacterized PE-PGRS family protein PE_PGRS46-like [Benincasa hispida])

HSP 1 Score: 843.2 bits (2177), Expect = 1.3e-240
Identity = 438/506 (86.56%), Postives = 461/506 (91.11%), Query Frame = 0


Query: 78  MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
           MDEGE GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPD 197
           DDLG K  EEPK+E   PV P+ GAS PGVG  A EV GLGDGG  VSERVTE Y+Q+PD
Sbjct: 61  DDLGFK-TEEPKMEPPAPVPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIPD 120

Query: 198 LRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGH---------PGP 257
           LRTNE+AVRGG GSGPPVGGGGGIRVELGQGSK +ELEERSSNNVV H         P P
Sbjct: 121 LRTNEMAVRGGVGSGPPVGGGGGIRVELGQGSKTSELEERSSNNVVAHQAQHQHQQQPQP 180

Query: 258 Q-QQQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILF 317
           Q Q QHHHQPP  GVLGN G+VENEGLLRQGG +NVNGVGGN +GN+GS GGGGGGTILF
Sbjct: 181 QPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGVINVNGVGGNAFGNMGSAGGGGGGTILF 240

Query: 318 VGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNG 377
           VGDLHWWTTDAELEVELCKYGP+KEVKF+DEKASGKSKGYCQVEFYDPSAATACKEGMNG
Sbjct: 241 VGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNG 300

Query: 378 HDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGG 437
           H FNGRPCVVAYASPFSVK+MGEAQVNRNQQM+QA N Q RRGPNDA GKIGGS+IATGG
Sbjct: 301 HIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGG 360

Query: 438 NYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGAT 497
           NYQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMR+RGGGMGGRGIMGNGGNGFGQGIGAT
Sbjct: 361 NYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGAT 420

Query: 498 PPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPH 557
           PPLLHPQSMMGQGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSFPPVGGVGLPGVAPH
Sbjct: 421 PPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPH 480

Query: 558 VNPAFFGRGMPMTGMGMMPTSGVDGP 573
           VNPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 VNPAFFGRGMPMNGMGMMPTSGVDGP 505

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BLAST of Sgr017913 vs. NCBI nr
Match: TYK07956.1 (cleavage and polyadenylation specificity factor subunit 6 [Cucumis melo var. makuwa])

HSP 1 Score: 842.0 bits (2174), Expect = 3.0e-240
Identity = 435/505 (86.14%), Postives = 459/505 (90.89%), Query Frame = 0


Query: 78  MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
           MDEGE GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGD-GGPRVSERVTEIYSQVP 197
           D LG KREEEPK+E   PV P  GAS PG+G  A EVTGLGD GG  VSERVTE Y+Q+P
Sbjct: 61  DGLGFKREEEPKMEPPAPVPPTSGASIPGIGGGATEVTGLGDAGGHTVSERVTEGYNQIP 120

Query: 198 DLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQ------- 257
           DLRTNE+A+RGGAGSGPPVGGG GIRVELGQGSK  ELEERSSNNV GH  PQ       
Sbjct: 121 DLRTNEMAIRGGAGSGPPVGGGVGIRVELGQGSKPIELEERSSNNVAGHQAPQQPQLQPQ 180

Query: 258 -QQQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILFV 317
            Q QHHHQPP  GVLGN G+VENEGLLRQGGGVNVNGVGGNG+GNVGS GGG GGT+LFV
Sbjct: 181 PQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNVGSAGGGSGGTVLFV 240

Query: 318 GDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 377
           GDLHWWTTDAELEVELCKYGP+KEVKF+DEKASGKSKGYCQVEFYDPSAATACKEGMNGH
Sbjct: 241 GDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 300

Query: 378 DFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGGN 437
            FNGRPCVVAYASPFSVK+MGEAQVNRNQQ++QA N Q RR PNDA GKIGGS+IATGGN
Sbjct: 301 IFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGN 360

Query: 438 YQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATP 497
           YQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMR RGGG+GGRGIMGNGGNGFGQGIGATP
Sbjct: 361 YQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATP 420

Query: 498 PLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPHV 557
           PLLHPQSMMGQGFDP+FGAP+GRMGTYGGFPGAPAP FSGILSSFPPVGGVGLPGVAPHV
Sbjct: 421 PLLHPQSMMGQGFDPSFGAPIGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480

Query: 558 NPAFFGRGMPMTGMGMMPTSGVDGP 573
           NPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 NPAFFGRGMPMNGMGMMPTSGVDGP 505

[Close]

BLAST of Sgr017913 vs. NCBI nr
Match: XP_022139595.1 (cleavage and polyadenylation specificity factor subunit 6 [Momordica charantia])

HSP 1 Score: 837.4 bits (2162), Expect = 7.4e-239
Identity = 437/511 (85.52%), Postives = 459/511 (89.82%), Query Frame = 0


Query: 78  MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
           MDEGE GFGEGVDQI+QFHRNEAISAVA+EGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 138 DDLGLKREEE-PKIE-STPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVP 197
           DDLG + EEE PKIE    +AP+ GAS PGVG  A EV  LGDGG  V ERVTE Y+Q+P
Sbjct: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120

Query: 198 DLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQQ------ 257
           DLRTNE+A+RGGAGSGPP+GGGGGIRVELGQGSK NELEERSSNNV  H  PQQ      
Sbjct: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180

Query: 258 --------QQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGG 317
                   QQHHHQP H GVLGN G+VEN+GLLRQ GGVNVNGVGGNGYGN+GS GGGGG
Sbjct: 181 QQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNMGSAGGGGG 240

Query: 318 GTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACK 377
           GTILFVGDLHWWTTDAELEVELCKYGP+KEVKFFDEKASGKSKGYCQVEFYDPSAATACK
Sbjct: 241 GTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACK 300

Query: 378 EGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSN 437
           EGMNGH FNGRPCVVA+ASPFSVK+MGEAQVNRNQQ++QAAN Q RRGPNDA GKIGGSN
Sbjct: 301 EGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAVGKIGGSN 360

Query: 438 IATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ 497
           I TGGNYQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ
Sbjct: 361 IQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ 420

Query: 498 GIGATPPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLP 557
           GIGATPPLLHPQSMMGQGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSFPPVGGVGLP
Sbjct: 421 GIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLP 480

Query: 558 GVAPHVNPAFFGRGMPMTGMGMMPTSGVDGP 573
           GVAPHVNPAFFGRGMPM GMGMM  SGVDGP
Sbjct: 481 GVAPHVNPAFFGRGMPMNGMGMMAPSGVDGP 510

[Close]

BLAST of Sgr017913 vs. NCBI nr
Match: XP_031744545.1 (cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sativus] >XP_031744546.1 cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sativus] >KAE8645915.1 hypothetical protein Csa_011894 [Cucumis sativus])

HSP 1 Score: 831.6 bits (2147), Expect = 4.0e-237
Identity = 431/513 (84.02%), Postives = 458/513 (89.28%), Query Frame = 0


Query: 78  MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
           MDEGE GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRK+
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKS 60

Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGD-GGPRVSERVTEIYSQVP 197
           DDLG KREEEPK+E   PV P+  AS PG+G  A EVTGLGD GG  VSERVTE Y+Q+P
Sbjct: 61  DDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGRTVSERVTEGYNQIP 120

Query: 198 DLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQQQ----- 257
           DLRTNE+A+RGG GSGPPVG G GIRVELGQGSK  ELEERSSNNV GH  PQQQ     
Sbjct: 121 DLRTNEMAIRGGVGSGPPVGTGVGIRVELGQGSKAIELEERSSNNVAGHQAPQQQQQQPQ 180

Query: 258 -----------QHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGG 317
                      QHHHQPP  GVLGN G+VENEGLLRQGGGVNVNGVGGNG+GN+GS GGG
Sbjct: 181 PQPQPQPQPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNIGSAGGG 240

Query: 318 GGGTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATA 377
           GGGTILFVGDLHWWTTDAELEVELCKYGP+KEVKF+DEKASGKSKGYCQVEFYDPSAATA
Sbjct: 241 GGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA 300

Query: 378 CKEGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGG 437
           CKEGMNGH FNGRPCVVAYASPFSVK+MGEAQV+RNQQ++QA N Q RR PN+A GKIGG
Sbjct: 301 CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVSRNQQIAQATNPQARRAPNEAVGKIGG 360

Query: 438 SNIATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGF 497
           ++IATGGNYQGGDN+RGSGRG+WGR +AHGMGGRGPAG MR RGGGMGGRGIMGNGGNGF
Sbjct: 361 NSIATGGNYQGGDNNRGSGRGNWGRSNAHGMGGRGPAGQMRGRGGGMGGRGIMGNGGNGF 420

Query: 498 GQGIGATPPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVG 557
           GQGIGATPPLLHPQSMMGQGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSFPPVGGVG
Sbjct: 421 GQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVG 480

Query: 558 LPGVAPHVNPAFFGRGMPMTGMGMMPTSGVDGP 573
           LPGVAPHVNPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 LPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGP 513

[Close]

BLAST of Sgr017913 vs. ExPASy Swiss-Prot
Match: Q03250 (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.6e-07
Identity = 63/182 (34.62%), Postives = 78/182 (42.86%), Query Frame = 0


Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
           FVG L W T D  LE    +YG V + K  +++ +G+S+G+  V F D  A     EGMN
Sbjct: 11  FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70

Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSN--IA 425
           G D +GR   V  A                 Q   +    G RG      + GG      
Sbjct: 71  GQDLDGRSITVNEA-----------------QSRGSGGGGGHRGGGGGGYRSGGGGGYSG 130

Query: 426 TGGNYQGGDNSRGSGRGSWGRG---SAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFG 483
            GG+Y GG   R  G G  G G   S+ G GG    G  R  GGG GG    G GG+G G
Sbjct: 131 GGGSYGGGGGRREGGGGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGYGGSGGG 175

[Close]

BLAST of Sgr017913 vs. ExPASy Swiss-Prot
Match: Q05966 (Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.7e-07
Identity = 65/184 (35.33%), Postives = 84/184 (45.65%), Query Frame = 0


Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
           FVG L W T DAELE    ++G V + K  +++ +G+S+G+  V F D  +     + MN
Sbjct: 9   FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68

Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATG 425
           G + +GR   V                  N+  S+     G RG     G+ GG     G
Sbjct: 69  GKELDGRTITV------------------NEAQSRGGGGGGGRGGGGYGGRGGGGYGGGG 128

Query: 426 GNY-----QGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFG 485
           G Y      GG  S G GRG  G GS  G GG G  G  R+ GGG GG    G+GG G G
Sbjct: 129 GGYGDRRGGGGYGSGGGGRGGGGYGS--GGGGYGGGGGRRD-GGGYGG----GDGGYGGG 167

[Close]

BLAST of Sgr017913 vs. ExPASy Swiss-Prot
Match: Q03251 (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=RBG8 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.7e-07
Identity = 62/176 (35.23%), Postives = 82/176 (46.59%), Query Frame = 0


Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
           FVG L W T D +L+    ++G V + K  +++ SG+S+G+  V F D  A     E MN
Sbjct: 9   FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68

Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATG 425
           G + +GR           V  + EAQ   ++        +G  G    +G  GG +   G
Sbjct: 69  GKELDGR-----------VITVNEAQ---SRGSGGGGGGRGGSGGGYRSGGGGGYSGGGG 128

Query: 426 GNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGG--RGIMGNGGNGF 480
           G Y GG    G  R S G GS  G GGRG  G  R  GGG GG   G  G GG G+
Sbjct: 129 GGYSGGGGG-GYERRSGGYGSGGGGGGRGYGGGGRREGGGYGGGDGGSYGGGGGGW 169

[Close]

BLAST of Sgr017913 vs. ExPASy Swiss-Prot
Match: P49311 (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.3e-07
Identity = 59/175 (33.71%), Postives = 74/175 (42.29%), Query Frame = 0


Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
           FVG L W T +  LE    ++G + + K  +++ +G+S+G+  V F D  +     EGMN
Sbjct: 11  FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70

Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATG 425
           G D +GR                   VN  Q     A   GR G     G  GG     G
Sbjct: 71  GQDLDGR----------------SITVNEAQSRGSGAGGGGRGGGGGYRG--GGGYGGGG 130

Query: 426 GNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFG 481
           G Y GG    G   G  G  S+ G GG G  G  R  GGG GG    G GG G G
Sbjct: 131 GGYGGGRREGGGYSGGGGGYSSRGGGGGGYGGGGRRDGGGYGGGEGGGYGGGGGG 167

[Close]

BLAST of Sgr017913 vs. ExPASy Swiss-Prot
Match: P49310 (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.8e-06
Identity = 61/181 (33.70%), Postives = 75/181 (41.44%), Query Frame = 0


Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
           FVG L W T D  LE    +YG V + K  +++ +G+S+G+  V F D  +     EGMN
Sbjct: 11  FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70

Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATG 425
           G D +GR   V            EAQ                RG     G  GG     G
Sbjct: 71  GQDLDGRSITV-----------NEAQ---------------SRGSGGGGGGRGGG----G 130

Query: 426 GNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGA 485
           G   GG    G G G +G G   G G  G  G   +RGGG GG G  G    G G G G 
Sbjct: 131 GYRSGGGGGYGGGGGGYGGGGREG-GYSGGGGGYSSRGGGGGGYGGGGRRDGGEGGGYGG 160

Query: 486 T 487
           +
Sbjct: 191 S 160

[Close]

BLAST of Sgr017913 vs. ExPASy TrEMBL
Match: A0A5D3CC60 (Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00770 PE=4 SV=1)

HSP 1 Score: 842.0 bits (2174), Expect = 1.4e-240
Identity = 435/505 (86.14%), Postives = 459/505 (90.89%), Query Frame = 0


Query: 78  MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
           MDEGE GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGD-GGPRVSERVTEIYSQVP 197
           D LG KREEEPK+E   PV P  GAS PG+G  A EVTGLGD GG  VSERVTE Y+Q+P
Sbjct: 61  DGLGFKREEEPKMEPPAPVPPTSGASIPGIGGGATEVTGLGDAGGHTVSERVTEGYNQIP 120

Query: 198 DLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQ------- 257
           DLRTNE+A+RGGAGSGPPVGGG GIRVELGQGSK  ELEERSSNNV GH  PQ       
Sbjct: 121 DLRTNEMAIRGGAGSGPPVGGGVGIRVELGQGSKPIELEERSSNNVAGHQAPQQPQLQPQ 180

Query: 258 -QQQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILFV 317
            Q QHHHQPP  GVLGN G+VENEGLLRQGGGVNVNGVGGNG+GNVGS GGG GGT+LFV
Sbjct: 181 PQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNVGSAGGGSGGTVLFV 240

Query: 318 GDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 377
           GDLHWWTTDAELEVELCKYGP+KEVKF+DEKASGKSKGYCQVEFYDPSAATACKEGMNGH
Sbjct: 241 GDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 300

Query: 378 DFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGGN 437
            FNGRPCVVAYASPFSVK+MGEAQVNRNQQ++QA N Q RR PNDA GKIGGS+IATGGN
Sbjct: 301 IFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGN 360

Query: 438 YQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATP 497
           YQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMR RGGG+GGRGIMGNGGNGFGQGIGATP
Sbjct: 361 YQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATP 420

Query: 498 PLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPHV 557
           PLLHPQSMMGQGFDP+FGAP+GRMGTYGGFPGAPAP FSGILSSFPPVGGVGLPGVAPHV
Sbjct: 421 PLLHPQSMMGQGFDPSFGAPIGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480

Query: 558 NPAFFGRGMPMTGMGMMPTSGVDGP 573
           NPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 NPAFFGRGMPMNGMGMMPTSGVDGP 505

[Close]

BLAST of Sgr017913 vs. ExPASy TrEMBL
Match: A0A6J1CCR1 (cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia OX=3673 GN=LOC111010455 PE=4 SV=1)

HSP 1 Score: 837.4 bits (2162), Expect = 3.6e-239
Identity = 437/511 (85.52%), Postives = 459/511 (89.82%), Query Frame = 0


Query: 78  MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
           MDEGE GFGEGVDQI+QFHRNEAISAVA+EGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 138 DDLGLKREEE-PKIE-STPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVP 197
           DDLG + EEE PKIE    +AP+ GAS PGVG  A EV  LGDGG  V ERVTE Y+Q+P
Sbjct: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120

Query: 198 DLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQQ------ 257
           DLRTNE+A+RGGAGSGPP+GGGGGIRVELGQGSK NELEERSSNNV  H  PQQ      
Sbjct: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180

Query: 258 --------QQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGG 317
                   QQHHHQP H GVLGN G+VEN+GLLRQ GGVNVNGVGGNGYGN+GS GGGGG
Sbjct: 181 QQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNMGSAGGGGG 240

Query: 318 GTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACK 377
           GTILFVGDLHWWTTDAELEVELCKYGP+KEVKFFDEKASGKSKGYCQVEFYDPSAATACK
Sbjct: 241 GTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACK 300

Query: 378 EGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSN 437
           EGMNGH FNGRPCVVA+ASPFSVK+MGEAQVNRNQQ++QAAN Q RRGPNDA GKIGGSN
Sbjct: 301 EGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAVGKIGGSN 360

Query: 438 IATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ 497
           I TGGNYQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ
Sbjct: 361 IQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ 420

Query: 498 GIGATPPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLP 557
           GIGATPPLLHPQSMMGQGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSFPPVGGVGLP
Sbjct: 421 GIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLP 480

Query: 558 GVAPHVNPAFFGRGMPMTGMGMMPTSGVDGP 573
           GVAPHVNPAFFGRGMPM GMGMM  SGVDGP
Sbjct: 481 GVAPHVNPAFFGRGMPMNGMGMMAPSGVDGP 510

[Close]

BLAST of Sgr017913 vs. ExPASy TrEMBL
Match: A0A0A0K3G6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV=1)

HSP 1 Score: 827.4 bits (2136), Expect = 3.7e-236
Identity = 430/505 (85.15%), Postives = 457/505 (90.50%), Query Frame = 0


Query: 78  MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
           MDEGE GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRK+
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKS 60

Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGD-GGPRVSERVTEIYSQVP 197
           DDLG KREEEPK+E   PV P+  AS PG+G  A EVTGLGD GG  VSERVTE Y+Q+P
Sbjct: 61  DDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGRTVSERVTEGYNQIP 120

Query: 198 DLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGH-------PGPQ 257
           DLRTNE+A+RGG GSGPPVG G GIRVELGQGSK  ELEERSSNNV GH       P PQ
Sbjct: 121 DLRTNEMAIRGGVGSGPPVGTGVGIRVELGQGSKAIELEERSSNNVAGHQAPPQPQPQPQ 180

Query: 258 -QQQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILFV 317
            Q QHHHQPP  GVLGN G+VENEGLLRQGGGVNVNGVGGNG+GN+GS GGGGGGTILFV
Sbjct: 181 PQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNIGSAGGGGGGTILFV 240

Query: 318 GDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 377
           GDLHWWTTDAELEVELCKYGP+KEVKF+DEKASGKSKGYCQVEFYD SAATACKEGMNGH
Sbjct: 241 GDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDSSAATACKEGMNGH 300

Query: 378 DFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGGN 437
            FNGRPCVVAYASPFSVK+MGEAQV+RNQQ++QA N Q RR PN+A GKIGG++IATGGN
Sbjct: 301 IFNGRPCVVAYASPFSVKKMGEAQVSRNQQIAQATNPQARRAPNEAVGKIGGNSIATGGN 360

Query: 438 YQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATP 497
           YQGGDN+RGSGRG+WGR +AHGMGGRGPAG MR RGGGMGGRGIMGNGGNGFGQGIGATP
Sbjct: 361 YQGGDNNRGSGRGNWGRSNAHGMGGRGPAGQMRGRGGGMGGRGIMGNGGNGFGQGIGATP 420

Query: 498 PLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPHV 557
           PLLHPQSMMGQGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSFPPVGGVGLPGVAPHV
Sbjct: 421 PLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480

Query: 558 NPAFFGRGMPMTGMGMMPTSGVDGP 573
           NPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 NPAFFGRGMPMNGMGMMPTSGVDGP 505

[Close]

BLAST of Sgr017913 vs. ExPASy TrEMBL
Match: A0A6J1ILS2 (cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxima OX=3661 GN=LOC111476425 PE=4 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 6.3e-236
Identity = 431/520 (82.88%), Postives = 453/520 (87.12%), Query Frame = 0


Query: 78  MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
           MDEGE G G G DQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPD 197
           DDLG K EEEPK+E    V P  GAS PG G    +V GLGDGG  V+ERVTE Y+Q+PD
Sbjct: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120

Query: 198 LRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQQQ------ 257
           LR NE+A+R GAGSGPP+GGGGGIRVELGQGSK NELEERSSNNV  H  PQQQ      
Sbjct: 121 LRANEMAIRVGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPQQQQPQPQQ 180

Query: 258 --------------QHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGS- 317
                         QHHHQ   GGVLGN  +VENEGLLRQGGGVNVNGVGGNG+GNVGS 
Sbjct: 181 QLQPPAQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVGSA 240

Query: 318 ---GGGGGGGTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFY 377
              GGGGGGGTILFVGDLHWWTTDAELEVELCKYGP+KEVKFFDEKASGKSKGYCQVEFY
Sbjct: 241 GGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFY 300

Query: 378 DPSAATACKEGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPND 437
           DPSAATACKEGMNGH FNGRPCVVAYASPFSVKRMGEAQVNRNQQM+QA N Q RRGPND
Sbjct: 301 DPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGPND 360

Query: 438 AAGKIGGSNIATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIM 497
             GK+GGS+IATGGNYQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMRNRGGGMGGRGIM
Sbjct: 361 TVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIM 420

Query: 498 GNGGNGFGQGIGATPPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSF 557
           GNGGNGFGQG+GATPPLLHPQSMMGQGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSF
Sbjct: 421 GNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSF 480

Query: 558 PPVGGVGLPGVAPHVNPAFFGRGMPMTGMGMMPTSGVDGP 573
           PPVGGVGLPGVAPHVNPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 PPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGP 520

[Close]

BLAST of Sgr017913 vs. ExPASy TrEMBL
Match: A0A6J1ITV5 (cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita maxima OX=3661 GN=LOC111480534 PE=4 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 6.3e-236
Identity = 427/503 (84.89%), Postives = 451/503 (89.66%), Query Frame = 0


Query: 78  MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
           MDEGE GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPD 197
           +DLG K  EEPK E    VAP+ GAS PGVG  A EV+GLGDGGP VS R TE Y+Q+PD
Sbjct: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGATEVSGLGDGGPSVSVRPTEGYNQIPD 120

Query: 198 LRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGP--------Q 257
           LRTNE+A+RGGAGSGPP+GGGGGIRVELGQGSK NEL+ERSSNN   H  P        Q
Sbjct: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELDERSSNNAAAHQAPQQQQQQQQQ 180

Query: 258 QQQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILFVG 317
           QQQHH QPP GG+LGN GNVENEGLLRQGGGVNVNG GGNG GN+G+ GGGGGGTILFVG
Sbjct: 181 QQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGTILFVG 240

Query: 318 DLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGHD 377
           DLHWWTTDAELEVELCKYGP+KEVKFFDEKASGKSKGYCQVEFYD SAATACKEGMNGH 
Sbjct: 241 DLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGHI 300

Query: 378 FNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGGNY 437
           FNGRPCVVA+ASPFSVKRMGEAQVNRNQQ++QA N Q RRGPN+AAGKIGGSNIATGGNY
Sbjct: 301 FNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGNY 360

Query: 438 QGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATPP 497
           QG DN+RGSGRG+WGRG+AHGMGGRGPAG MR RGGGMGGRGIMGNGG GFGQGIG TPP
Sbjct: 361 QGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTPP 420

Query: 498 LLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPHVN 557
           LLHPQSMMGQGFDP FGAPMGRMG YGGFPGAPAP FSGILSSFPPVGGVGLPGVAPHVN
Sbjct: 421 LLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVN 480

Query: 558 PAFFGRGMPMTGMGMMPTSGVDG 572
           PAFFGRGMPM GMGMMP+SGVDG
Sbjct: 481 PAFFGRGMPMNGMGMMPSSGVDG 503

[Close]

BLAST of Sgr017913 vs. TAIR 10
Match: AT5G55670.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 493.4 bits (1269), Expect = 2.4e-139
Identity = 303/521 (58.16%), Postives = 350/521 (67.18%), Query Frame = 0


Query: 86  GEGVDQIEQFHRNEAISAVAEEGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLGLKR 145
           G+G DQ++QFH+NEAISAVA++GF+ E+E D+YEDLYNDVNVGEGFLQS++KND+ G + 
Sbjct: 4   GDGRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKKNDEAGSRN 63

Query: 146 EEEPKI---ESTPVAPNLG-----ASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPD 205
           EE+ K+   E   V P LG      S PG+   + E     + G   S   T++      
Sbjct: 64  EEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGTDVVVASSG 123

Query: 206 LRTNEIAVR-------GGAGSGPPVGGGGGIRVELGQGS-KINELEERSSNNVVGHPGPQ 265
               E+ V        GG G+G     GGG+RVELGQ S + N+LE    NN+       
Sbjct: 124 YGAQEVKVSDVSQEIPGGIGTGT----GGGLRVELGQASNRANDLEAPRGNNI------- 183

Query: 266 QQQHHHQPPHGGVLGNAGNVEN------EGLLRQGGGVNVNGVGGN----GYGNVGSGGG 325
             Q    PP   VLGN  N+         G +  G G N+ G G N    G    G+GGG
Sbjct: 184 -SQGLLPPP--PVLGNNENLMRPVMGNVNGGIPPGPGSNMVGNGANIAMPGVVGGGTGGG 243

Query: 326 GGGGTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAAT 385
           GGGG  LFVGDLHWWTTDAELE ELCKYG VKEVKFFDEKASGKSKGYCQVEFYDP AA+
Sbjct: 244 GGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFYDPVAAS 303

Query: 386 ACKEGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGK-- 445
           ACK+ +NG+ FNGRPCVV YASP+SVKRMGEAQVNR QQ         R GP D   K  
Sbjct: 304 ACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQAQSVIAQAKRGGPADPPSKPL 363

Query: 446 -----IGGSNIATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGI 505
                   +N A GGN+QGG+N RG GRG+WGRG+A GMGGRGP GPMRNR  GMGGRG+
Sbjct: 364 VANNNNNNNNNAIGGNFQGGEN-RGFGRGNWGRGNAQGMGGRGPGGPMRNRPNGMGGRGL 423

Query: 506 MGNGGNGFGQGIGATPPL-LHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILS 565
           MGNG  GFGQG+G  PP+ +  Q MMGQGF+ AFG PM RMG YGGFPGAP P F G+LS
Sbjct: 424 MGNG--GFGQGMGTGPPMNMMHQPMMGQGFEQAFGGPMARMGGYGGFPGAPGPQFPGLLS 483

Query: 566 SFPPVGGVGLPGVAPHVNPAFFGRGMPMTGMGMMPTSGVDG 572
           SFPPVGGVGLPGVAPHVNPAFFGRGMPM GMGMMP +GVDG
Sbjct: 484 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPNAGVDG 507

[Close]

BLAST of Sgr017913 vs. TAIR 10
Match: AT5G55670.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 337.0 bits (863), Expect = 2.9e-92
Identity = 225/425 (52.94%), Postives = 266/425 (62.59%), Query Frame = 0


Query: 86  GEGVDQIEQFHRNEAISAVAEEGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLGLKR 145
           G+G DQ++QFH+NEAISAVA++GF+ E+E D+YEDLYNDVNVGEGFLQS++KND+ G + 
Sbjct: 4   GDGRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKKNDEAGSRN 63

Query: 146 EEEPKI---ESTPVAPNLG-----ASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPD 205
           EE+ K+   E   V P LG      S PG+   + E     + G   S   T++      
Sbjct: 64  EEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGTDVVVASSG 123

Query: 206 LRTNEIAVR-------GGAGSGPPVGGGGGIRVELGQGS-KINELEERSSNNVVGHPGPQ 265
               E+ V        GG G+G     GGG+RVELGQ S + N+LE    NN+       
Sbjct: 124 YGAQEVKVSDVSQEIPGGIGTGT----GGGLRVELGQASNRANDLEAPRGNNI------- 183

Query: 266 QQQHHHQPPHGGVLGNAGNVEN------EGLLRQGGGVNVNGVGGN----GYGNVGSGGG 325
             Q    PP   VLGN  N+         G +  G G N+ G G N    G    G+GGG
Sbjct: 184 -SQGLLPPP--PVLGNNENLMRPVMGNVNGGIPPGPGSNMVGNGANIAMPGVVGGGTGGG 243

Query: 326 GGGGTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAAT 385
           GGGG  LFVGDLHWWTTDAELE ELCKYG VKEVKFFDEKASGKSKGYCQVEFYDP AA+
Sbjct: 244 GGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFYDPVAAS 303

Query: 386 ACKEGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGK-- 445
           ACK+ +NG+ FNGRPCVV YASP+SVKRMGEAQVNR QQ         R GP D   K  
Sbjct: 304 ACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQAQSVIAQAKRGGPADPPSKPL 363

Query: 446 -----IGGSNIATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGI 477
                   +N A GGN+QGG+N RG GRG+WGRG+A GMGGRGP GPMRNR  GMGGR  
Sbjct: 364 VANNNNNNNNNAIGGNFQGGEN-RGFGRGNWGRGNAQGMGGRGPGGPMRNRPNGMGGRAA 413

[Close]

BLAST of Sgr017913 vs. TAIR 10
Match: AT1G13190.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 220.7 bits (561), Expect = 3.0e-57
Identity = 194/494 (39.27%), Postives = 256/494 (51.82%), Query Frame = 0


Query: 101 ISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGLKREEEPKIES----TPVA 160
           I A+A+E  +G D+DEY+DLY+DVNVGE F Q+  +             +++        
Sbjct: 21  IPALADEELMG-DDDEYDDLYSDVNVGESFFQAHNQPQPPAQVNTSNASLQAQNSHVAAE 80

Query: 161 PNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPDLRTNEIAVRGGAGSGPPVGG 220
           P +G  + G         G G  G    +  +++Y Q                      G
Sbjct: 81  PRMGIVSGGTVEGKYRNDG-GHNGISGPDTRSDVYPQASSF------------------G 140

Query: 221 GGGIRVELGQGSKINELEERSSNNVVGHPGPQQQQHHHQPPHGGVLGNAGNV------EN 280
             G+ +++    + N++ ++ S  VV         ++H     G  GNA NV       +
Sbjct: 141 AKGLNIDI----QSNKIAQQGSTTVV--------LNNH-----GFSGNAVNVPEMPVHNS 200

Query: 281 EGLLRQGG---GVNVNGVGGNGYGN---VGSGGGGGGGTILFVGDLHWWTTDAELEVELC 340
            G   QG     V+   V  N   N     S     G T+LFVG+LHWWTTDAE+E  L 
Sbjct: 201 YGAPPQGAQQIPVSQMSVNPNVMMNKSPTQSFVVDNGNTMLFVGELHWWTTDAEIESVLS 260

Query: 341 KYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGHDFNGRPCVVAYASPFSV 400
           +YG VKE+KFFDE+ SGKSKGYCQVEFYD +AA ACKEGMNG  FNG+ CVVA+ASP ++
Sbjct: 261 QYGRVKEIKFFDERVSGKSKGYCQVEFYDSAAAAACKEGMNGFIFNGKACVVAFASPETL 320

Query: 401 KRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGGNYQGGDNSRGSGRGSWGR 460
           K+MG     RNQ  +Q    Q RR  N+  G+  G+N     N Q GD  R  GRG + R
Sbjct: 321 KQMGANFTGRNQGQNQ---IQNRRPLNEGMGR--GNNNNNNMNTQNGDGGRNYGRGGFAR 380

Query: 461 GSAHGMGGRGPAGPMRNRGGGMGGRGI----MGNGGNGFGQGIG--ATPPLLHPQSMMGQ 520
           G   GMG RG A      GG M GRG+     G+G   +G G+   A   ++HPQ MMG 
Sbjct: 381 G-GQGMGNRGGAW-----GGAMRGRGVNNMASGSGAGPYGPGLAGPAFGGMMHPQGMMGA 440

Query: 521 -GFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMP 572
            GFDP F   MGR   YGG+ G   P   G+  S+P V  +G+ G+APHVNPAFFG    
Sbjct: 441 GGFDPTF---MGRGAGYGGYSGIAYP---GMPHSYPGVNAMGMVGIAPHVNPAFFG---- 455

[Close]

BLAST of Sgr017913 vs. TAIR 10
Match: AT2G21660.2 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 60.8 bits (146), Expect = 4.0e-09
Identity = 63/174 (36.21%), Postives = 76/174 (43.68%), Query Frame = 0


Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
           FVG L W T D  LE    +YG V + K  +++ +G+S+G+  V F D  A     EGMN
Sbjct: 11  FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70

Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATG 425
           G D +GR   V  A                 Q   +    G RG     G  GG     G
Sbjct: 71  GQDLDGRSITVNEA-----------------QSRGSGGGGGHRGGGSYGG--GGGRREGG 130

Query: 426 GNYQGGD---NSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGG 477
           G Y GG    +SRG G GS+G G   G GG G        GGG GG G  G GG
Sbjct: 131 GGYSGGGGGYSSRGGGGGSYGGGRREGGGGYG-----GGEGGGYGGSG--GGGG 158

[Close]

BLAST of Sgr017913 vs. TAIR 10
Match: AT2G21660.1 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-08
Identity = 63/182 (34.62%), Postives = 78/182 (42.86%), Query Frame = 0


Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
           FVG L W T D  LE    +YG V + K  +++ +G+S+G+  V F D  A     EGMN
Sbjct: 11  FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70

Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSN--IA 425
           G D +GR   V  A                 Q   +    G RG      + GG      
Sbjct: 71  GQDLDGRSITVNEA-----------------QSRGSGGGGGHRGGGGGGYRSGGGGGYSG 130

Query: 426 TGGNYQGGDNSRGSGRGSWGRG---SAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFG 483
            GG+Y GG   R  G G  G G   S+ G GG    G  R  GGG GG    G GG+G G
Sbjct: 131 GGGSYGGGGGRREGGGGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGYGGSGGG 175

The following BLAST results are available for this feature:

BLAST of Sgr017913 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897335.1	1.0e-240	85.77	cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispid...	[more]
XP_038897113.1	1.3e-240	86.56	uncharacterized PE-PGRS family protein PE_PGRS46-like [Benincasa hispida]	[more]
TYK07956.1	3.0e-240	86.14	cleavage and polyadenylation specificity factor subunit 6 [Cucumis melo var. mak...	[more]
XP_022139595.1	7.4e-239	85.52	cleavage and polyadenylation specificity factor subunit 6 [Momordica charantia]	[more]
XP_031744545.1	4.0e-237	84.02	cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sat...	[more]

BLAST of Sgr017913 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q03250	1.6e-07	34.62	Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 ...	[more]
Q05966	3.7e-07	35.33	Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1	[more]
Q03251	3.7e-07	35.23	Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=RBG8 PE=1 ...	[more]
P49311	6.3e-07	33.71	Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1	[more]
P49310	1.8e-06	33.70	Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1	[more]

BLAST of Sgr017913 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CC60	1.4e-240	86.14	Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. m...	[more]
A0A6J1CCR1	3.6e-239	85.52	cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia...	[more]
A0A0A0K3G6	3.7e-236	85.15	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV...	[more]
A0A6J1ILS2	6.3e-236	82.88	cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxi...	[more]
A0A6J1ITV5	6.3e-236	84.89	cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita...	[more]

BLAST of Sgr017913 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55670.1	2.4e-139	58.16	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G55670.2	2.9e-92	52.94	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G13190.1	3.0e-57	39.27	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G21660.2	4.0e-09	36.21	cold, circadian rhythm, and rna binding 2	[more]
AT2G21660.1	1.2e-08	34.62	cold, circadian rhythm, and rna binding 2	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 304..377 e-value: 2.3E-20 score: 83.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 305..374 e-value: 6.4E-14 score: 51.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 303..381 score: 13.890656
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 235..406 e-value: 4.4E-22 score: 80.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 390..488
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 390..407
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 422..440
None	No IPR available	PANTHER	PTHR23204:SF9	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6-LIKE	coord: 79..573
None	No IPR available	CDD	cd12372	RRM_CFIm68_CFIm59	coord: 305..378 e-value: 1.34099E-34 score: 123.559
IPR034772	CPSF6/7 family	PANTHER	PTHR23204	CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR	coord: 79..573
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 302..407

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr017913.1	Sgr017913.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding