Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGCGGCAGCGGCAGGGCAAAGTGGGTTTTCGTGGTGTGGCTGGTGCTGAGCTCGCTCACTACGGCGGAGTCCACATCTTTTCAGGAGTGCTACGCCACCTGCTTCGTCATCTGCGCCCTCACCCCCGGCGTCTCCTTCTCCGACTGCCCTTTAAAATGCCTCCAAGCCTGCATCATACCTTCTCTTCCCATCGACGCCAACGACCACCATCGACAAAACCACTTCTTCTGCAAGCTCGGCTGCGCTGCTTCCCTCTGCACCAACGTCAGCACCAACCAAAACCCAGGTTCGAAATCCGTACCCCCTTCTTCATTCTCTTTCACATGCGCCTTCTTTTTGGTTTTGTTTTGTTTTGCTTTTGGATGTGATTGTGATCTTCATTCAGCTGAAAAGAAAGTGGGAAGCTGTGTGGATTCGTGCTCTCAGACATGCTCCATGGATTGA
mRNA sequence
ATGGAGAGCGGCAGCGGCAGGGCAAAGTGGGTTTTCGTGGTGTGGCTGGTGCTGAGCTCGCTCACTACGGCGGAGTCCACATCTTTTCAGGAGTGCTACGCCACCTGCTTCGTCATCTGCGCCCTCACCCCCGGCGTCTCCTTCTCCGACTGCCCTTTAAAATGCCTCCAAGCCTGCATCATACCTTCTCTTCCCATCGACGCCAACGACCACCATCGACAAAACCACTTCTTCTGCAAGCTCGGCTGCGCTGCTTCCCTCTGCACCAACGTCAGCACCAACCAAAACCCAGGTTCGAAATCCGTACCCCCTTCTTCATTCTCTTTCACATGCGCCTTCTTTTTGGTTTTGTTTTGTTTTGCTTTTGGATGTGATTGTGATCTTCATTCAGCTGAAAAGAAAGTGGGAAGCTGTGTGGATTCGTGCTCTCAGACATGCTCCATGGATTGA
Coding sequence (CDS)
ATGGAGAGCGGCAGCGGCAGGGCAAAGTGGGTTTTCGTGGTGTGGCTGGTGCTGAGCTCGCTCACTACGGCGGAGTCCACATCTTTTCAGGAGTGCTACGCCACCTGCTTCGTCATCTGCGCCCTCACCCCCGGCGTCTCCTTCTCCGACTGCCCTTTAAAATGCCTCCAAGCCTGCATCATACCTTCTCTTCCCATCGACGCCAACGACCACCATCGACAAAACCACTTCTTCTGCAAGCTCGGCTGCGCTGCTTCCCTCTGCACCAACGTCAGCACCAACCAAAACCCAGGTTCGAAATCCGTACCCCCTTCTTCATTCTCTTTCACATGCGCCTTCTTTTTGGTTTTGTTTTGTTTTGCTTTTGGATGTGATTGTGATCTTCATTCAGCTGAAAAGAAAGTGGGAAGCTGTGTGGATTCGTGCTCTCAGACATGCTCCATGGATTGA
Protein sequence
MESGSGRAKWVFVVWLVLSSLTTAESTSFQECYATCFVICALTPGVSFSDCPLKCLQACIIPSLPIDANDHHRQNHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFFLVLFCFAFGCDCDLHSAEKKVGSCVDSCSQTCSMD
Homology
BLAST of Sgr015637 vs. NCBI nr
Match:
XP_038899383.1 (thionin-like protein 2 [Benincasa hispida])
HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39
Identity = 87/143 (60.84%), Postives = 95/143 (66.43%), Query Frame = 0
Query: 9 KWVFVVWLVLSSLTTAESTSFQECYATCFVICALTPGVSFSDCPLKCLQACIIPSLPIDA 68
KW + WL+LSSL+TA STSFQECYATCFVICA+TPGV+FSDCPL+CLQACIIPS PID
Sbjct: 4 KWALIAWLLLSSLSTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIDN 63
Query: 69 NDHHR--QNHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFFLVLFCFAFGCDC 128
ND HR QN FFCKLGCA S CT ST QNP
Sbjct: 64 NDVHRQEQNQFFCKLGCAVSSCTKFSTKQNP----------------------------- 113
Query: 129 DLHSAEKKVGSCVDSCSQTCSMD 150
AEK+VG+CVDSCSQTCSMD
Sbjct: 124 ----AEKEVGNCVDSCSQTCSMD 113
BLAST of Sgr015637 vs. NCBI nr
Match:
XP_011659556.1 (thionin-like protein 2 [Cucumis sativus] >KGN45343.1 hypothetical protein Csa_016713 [Cucumis sativus])
HSP 1 Score: 166.4 bits (420), Expect = 1.9e-37
Identity = 83/145 (57.24%), Postives = 94/145 (64.83%), Query Frame = 0
Query: 9 KWVFVVWLVLSSLTTAESTSFQECYATCFVICALTPGVSFSDCPLKCLQACIIPSLPIDA 68
KW + WL+L+SL+TA STSFQECYATCFVICA+TPGV+FSDCPL+CLQACI+PS PID
Sbjct: 8 KWALMAWLLLTSLSTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIVPSFPIDD 67
Query: 69 ND----HHRQNHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFFLVLFCFAFGC 128
D +QNHFFCKLGCAAS CT ST QNPG
Sbjct: 68 ADVVHRQQQQNHFFCKLGCAASSCTKFSTKQNPG-------------------------- 119
Query: 129 DCDLHSAEKKVGSCVDSCSQTCSMD 150
E+KVG CVDSCSQTCSM+
Sbjct: 128 -------ERKVGRCVDSCSQTCSMN 119
BLAST of Sgr015637 vs. NCBI nr
Match:
XP_008461039.1 (PREDICTED: thionin-like protein 2 [Cucumis melo])
HSP 1 Score: 166.0 bits (419), Expect = 2.5e-37
Identity = 83/145 (57.24%), Postives = 94/145 (64.83%), Query Frame = 0
Query: 9 KWVFVVWLVLSSLTTAESTSFQECYATCFVICALTPGVSFSDCPLKCLQACIIPSLPIDA 68
KW + WL+L+SL+TA STSFQECYATCFVICA+TPGV+FSDCPL+CLQACI+PS PID
Sbjct: 8 KWALMAWLLLTSLSTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIVPSFPIDD 67
Query: 69 ND----HHRQNHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFFLVLFCFAFGC 128
+D +QNHFFCKLGCAAS CT ST QNPG
Sbjct: 68 DDVVHRQKQQNHFFCKLGCAASSCTKFSTKQNPG-------------------------- 119
Query: 129 DCDLHSAEKKVGSCVDSCSQTCSMD 150
E+KV CVDSCSQTCSMD
Sbjct: 128 -------ERKVERCVDSCSQTCSMD 119
BLAST of Sgr015637 vs. NCBI nr
Match:
XP_022953260.1 (thionin-like protein 2 [Cucurbita moschata] >XP_022953261.1 thionin-like protein 2 [Cucurbita moschata])
HSP 1 Score: 162.5 bits (410), Expect = 2.7e-36
Identity = 89/151 (58.94%), Postives = 98/151 (64.90%), Query Frame = 0
Query: 5 SGRAKWVFVVWLVLSSLTTAESTSFQECYATCFVICALTPGVSFSDCPLKCLQACIIPSL 64
S +AK + WLVLSSLTTA STSFQECYATCFVICA+TPGV+FSDCPL+CLQACIIPS
Sbjct: 3 SCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSF 62
Query: 65 PID----ANDHHRQ--NHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFFLVLF 124
PI +D HRQ N FFC+LGCAAS CT ST+QNP
Sbjct: 63 PIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNP--------------------- 120
Query: 125 CFAFGCDCDLHSAEKKVGSCVDSCSQTCSMD 150
AEKKVGSCVDSCS+TCSMD
Sbjct: 123 ------------AEKKVGSCVDSCSRTCSMD 120
BLAST of Sgr015637 vs. NCBI nr
Match:
XP_022992447.1 (thionin-like protein 2 [Cucurbita maxima] >XP_022992448.1 thionin-like protein 2 [Cucurbita maxima])
HSP 1 Score: 162.2 bits (409), Expect = 3.6e-36
Identity = 88/150 (58.67%), Postives = 98/150 (65.33%), Query Frame = 0
Query: 5 SGRAKWVFVVWLVLSSLTTAESTSFQECYATCFVICALTPGVSFSDCPLKCLQACIIPSL 64
S +AK + WLVLSSLTTA STSFQECYATCF+ICA+TPGV+FSDCPL+CLQACIIPS
Sbjct: 3 SCKAKLGLMAWLVLSSLTTANSTSFQECYATCFLICAITPGVAFSDCPLRCLQACIIPSF 62
Query: 65 PID---ANDHHRQ--NHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFFLVLFC 124
PI A+D HRQ N FFC+LGCAAS CT ST +NP
Sbjct: 63 PIHNAAADDVHRQQKNQFFCELGCAASSCTKFSTQKNP---------------------- 119
Query: 125 FAFGCDCDLHSAEKKVGSCVDSCSQTCSMD 150
AEKKVGSCVDSCS+TCSMD
Sbjct: 123 -----------AEKKVGSCVDSCSRTCSMD 119
BLAST of Sgr015637 vs. ExPASy Swiss-Prot
Match:
A8MRP4 (Thionin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12663 PE=3 SV=1)
HSP 1 Score: 60.1 bits (144), Expect = 2.5e-08
Identity = 40/141 (28.37%), Postives = 64/141 (45.39%), Query Frame = 0
Query: 11 VFVVWLV--LSSLTTAESTSFQECYATCFVIC-ALTPGVSFSDCPLKCLQACI-IPSLPI 70
V +V ++ L + T A+ F+ECY C V C A + + CP C + C+ PS P
Sbjct: 5 VMIVMVIGNLLAQTAAQKIPFKECYPACLVECKAGSKFPKYLKCPFTCTKECLQQPSPPS 64
Query: 71 DANDHHRQNHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFFLVLFCFAFGCDC 130
++++ ++ +FCKLGCA C ++S+ QNP
Sbjct: 65 VSSNNIDESDYFCKLGCATYHCVSLSSIQNPN---------------------------- 112
Query: 131 DLHSAEKKVGSCVDSCSQTCS 148
++V +CVDSCS C+
Sbjct: 125 -----VERVSACVDSCSNKCT 112
BLAST of Sgr015637 vs. ExPASy TrEMBL
Match:
A0A0A0K781 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G441625 PE=4 SV=1)
HSP 1 Score: 166.4 bits (420), Expect = 9.1e-38
Identity = 83/145 (57.24%), Postives = 94/145 (64.83%), Query Frame = 0
Query: 9 KWVFVVWLVLSSLTTAESTSFQECYATCFVICALTPGVSFSDCPLKCLQACIIPSLPIDA 68
KW + WL+L+SL+TA STSFQECYATCFVICA+TPGV+FSDCPL+CLQACI+PS PID
Sbjct: 8 KWALMAWLLLTSLSTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIVPSFPIDD 67
Query: 69 ND----HHRQNHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFFLVLFCFAFGC 128
D +QNHFFCKLGCAAS CT ST QNPG
Sbjct: 68 ADVVHRQQQQNHFFCKLGCAASSCTKFSTKQNPG-------------------------- 119
Query: 129 DCDLHSAEKKVGSCVDSCSQTCSMD 150
E+KVG CVDSCSQTCSM+
Sbjct: 128 -------ERKVGRCVDSCSQTCSMN 119
BLAST of Sgr015637 vs. ExPASy TrEMBL
Match:
A0A1S3CDU4 (thionin-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103499745 PE=4 SV=1)
HSP 1 Score: 166.0 bits (419), Expect = 1.2e-37
Identity = 83/145 (57.24%), Postives = 94/145 (64.83%), Query Frame = 0
Query: 9 KWVFVVWLVLSSLTTAESTSFQECYATCFVICALTPGVSFSDCPLKCLQACIIPSLPIDA 68
KW + WL+L+SL+TA STSFQECYATCFVICA+TPGV+FSDCPL+CLQACI+PS PID
Sbjct: 8 KWALMAWLLLTSLSTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIVPSFPIDD 67
Query: 69 ND----HHRQNHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFFLVLFCFAFGC 128
+D +QNHFFCKLGCAAS CT ST QNPG
Sbjct: 68 DDVVHRQKQQNHFFCKLGCAASSCTKFSTKQNPG-------------------------- 119
Query: 129 DCDLHSAEKKVGSCVDSCSQTCSMD 150
E+KV CVDSCSQTCSMD
Sbjct: 128 -------ERKVERCVDSCSQTCSMD 119
BLAST of Sgr015637 vs. ExPASy TrEMBL
Match:
A0A6J1GMH5 (thionin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111455863 PE=4 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 1.3e-36
Identity = 89/151 (58.94%), Postives = 98/151 (64.90%), Query Frame = 0
Query: 5 SGRAKWVFVVWLVLSSLTTAESTSFQECYATCFVICALTPGVSFSDCPLKCLQACIIPSL 64
S +AK + WLVLSSLTTA STSFQECYATCFVICA+TPGV+FSDCPL+CLQACIIPS
Sbjct: 3 SCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSF 62
Query: 65 PID----ANDHHRQ--NHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFFLVLF 124
PI +D HRQ N FFC+LGCAAS CT ST+QNP
Sbjct: 63 PIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNP--------------------- 120
Query: 125 CFAFGCDCDLHSAEKKVGSCVDSCSQTCSMD 150
AEKKVGSCVDSCS+TCSMD
Sbjct: 123 ------------AEKKVGSCVDSCSRTCSMD 120
BLAST of Sgr015637 vs. ExPASy TrEMBL
Match:
A0A6J1JZ84 (thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111488748 PE=4 SV=1)
HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36
Identity = 88/150 (58.67%), Postives = 98/150 (65.33%), Query Frame = 0
Query: 5 SGRAKWVFVVWLVLSSLTTAESTSFQECYATCFVICALTPGVSFSDCPLKCLQACIIPSL 64
S +AK + WLVLSSLTTA STSFQECYATCF+ICA+TPGV+FSDCPL+CLQACIIPS
Sbjct: 3 SCKAKLGLMAWLVLSSLTTANSTSFQECYATCFLICAITPGVAFSDCPLRCLQACIIPSF 62
Query: 65 PID---ANDHHRQ--NHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFFLVLFC 124
PI A+D HRQ N FFC+LGCAAS CT ST +NP
Sbjct: 63 PIHNAAADDVHRQQKNQFFCELGCAASSCTKFSTQKNP---------------------- 119
Query: 125 FAFGCDCDLHSAEKKVGSCVDSCSQTCSMD 150
AEKKVGSCVDSCS+TCSMD
Sbjct: 123 -----------AEKKVGSCVDSCSRTCSMD 119
BLAST of Sgr015637 vs. ExPASy TrEMBL
Match:
A0A6J1CW29 (thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111015320 PE=4 SV=1)
HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36
Identity = 88/155 (56.77%), Postives = 96/155 (61.94%), Query Frame = 0
Query: 7 RAKW---VFVVWLVL--SSLTTAESTSFQECYATCFVICALTPGVSFSDCPLKCLQACII 66
R KW +VWLV+ S +TTAESTSFQECYATCFVICA+TPG SFS+CPLKCLQACII
Sbjct: 5 RGKWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACII 64
Query: 67 PSLPID-------ANDHHRQNHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFF 126
PS PID A D NHFFCKLGCAA+LCTN +TN NP
Sbjct: 65 PSFPIDDAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNP----------------- 124
Query: 127 LVLFCFAFGCDCDLHSAEKKVGSCVDSCSQTCSMD 150
AEKKVG CVDSCS+TCSMD
Sbjct: 125 ----------------AEKKVGRCVDSCSRTCSMD 126
BLAST of Sgr015637 vs. TAIR 10
Match:
AT1G12663.1 (Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. )
HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09
Identity = 40/141 (28.37%), Postives = 64/141 (45.39%), Query Frame = 0
Query: 11 VFVVWLV--LSSLTTAESTSFQECYATCFVIC-ALTPGVSFSDCPLKCLQACI-IPSLPI 70
V +V ++ L + T A+ F+ECY C V C A + + CP C + C+ PS P
Sbjct: 5 VMIVMVIGNLLAQTAAQKIPFKECYPACLVECKAGSKFPKYLKCPFTCTKECLQQPSPPS 64
Query: 71 DANDHHRQNHFFCKLGCAASLCTNVSTNQNPGSKSVPPSSFSFTCAFFLVLFCFAFGCDC 130
++++ ++ +FCKLGCA C ++S+ QNP
Sbjct: 65 VSSNNIDESDYFCKLGCATYHCVSLSSIQNPN---------------------------- 112
Query: 131 DLHSAEKKVGSCVDSCSQTCS 148
++V +CVDSCS C+
Sbjct: 125 -----VERVSACVDSCSNKCT 112
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038899383.1 | 2.0e-39 | 60.84 | thionin-like protein 2 [Benincasa hispida] | [more] |
XP_011659556.1 | 1.9e-37 | 57.24 | thionin-like protein 2 [Cucumis sativus] >KGN45343.1 hypothetical protein Csa_01... | [more] |
XP_008461039.1 | 2.5e-37 | 57.24 | PREDICTED: thionin-like protein 2 [Cucumis melo] | [more] |
XP_022953260.1 | 2.7e-36 | 58.94 | thionin-like protein 2 [Cucurbita moschata] >XP_022953261.1 thionin-like protein... | [more] |
XP_022992447.1 | 3.6e-36 | 58.67 | thionin-like protein 2 [Cucurbita maxima] >XP_022992448.1 thionin-like protein 2... | [more] |
Match Name | E-value | Identity | Description | |
A8MRP4 | 2.5e-08 | 28.37 | Thionin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12663 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0K781 | 9.1e-38 | 57.24 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G441625 PE=4 SV=1 | [more] |
A0A1S3CDU4 | 1.2e-37 | 57.24 | thionin-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103499745 PE=4 SV=1 | [more] |
A0A6J1GMH5 | 1.3e-36 | 58.94 | thionin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111455863 PE=4 SV=1 | [more] |
A0A6J1JZ84 | 1.7e-36 | 58.67 | thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111488748 PE=4 SV=1 | [more] |
A0A6J1CW29 | 1.7e-36 | 56.77 | thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111015320 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G12663.1 | 1.8e-09 | 28.37 | Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant t... | [more] |