Sgr015478 (gene) Monk fruit (Qingpiguo) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGGCGTCCTCTCCGACGGCGATCGGCTCGGCAGCATCCGCTTACAGCAGGTTTGATGGATCGCCTCGGCAGTATCTCTATCTCTCCAGCAGGTATATGGATAGCAGATGTCTTAATGGTGCTCATCCTTGTTGTTCGACTGTTTTATACAATGTTGAGACGTTTAACCTTTATCGGGAACTGATGCATGTTAAAATTCCATTTTACTTACAGGAAAGTGAATTAATATTGAGGAATTTCCCAATGGCGAAGAATCAGTCTTTTTCGATAAAAGACACTGTCTATAAATTGCAGCTTGAAGGCATTCAGAATGAGAACCAGCTATTTGCTGCTGGGTCTCTCATGTCTCGCAGTGACTATGCGTTCTATTGCAAACCTCTGTGGATATCCATTATGCCATTCTAATTTGTTGTCTGATAACACTAGGAAAGGAAAGGCCGGTACAGAATTTCATTAAAAGACCATCATAAGGTGTATGATTTACAAGAGACATATAAGTACTGCTCTTCCACTTGCCTCATTAACAGCCGTGCCTTTGCTGGAAGATTGCAAGATGAGAGGTGTTCAGTTTTGAATCCTGGGAAACTTAAAGAAATTCCAAGGCTGTTTGAGAATCGAAGTTTGGGTTCTAAGAAAAATATGGGGAATAATTGTGATTTGGGGCTATCAGGCCTTGAAATTCAGGAGAAGACAGAAAACAATGTTGAAGAAGTTCCTATTGAAGAGTGGATGGGTCCATCAAATGCAATTGAAAACTAA ATGCCGGCGTCCTCTCCGACGGCGATCGGCTCGGCAGCATCCGCTTACAGCAGGTTTGATGGATCGCCTCGGCAGTATCTCTATCTCTCCAGCAGCCGTGCCTTTGCTGGAAGATTGCAAGATGAGAGGTGTTCAGTTTTGAATCCTGGGAAACTTAAAGAAATTCCAAGGCTGTTTGAGAATCGAAGTTTGGGTTCTAAGAAAAATATGGGGAATAATTGTGATTTGGGGCTATCAGGCCTTGAAATTCAGGAGAAGACAGAAAACAATGTTGAAGAAGTTCCTATTGAAGAGTGGATGGGTCCATCAAATGCAATTGAAAACTAA ATGCCGGCGTCCTCTCCGACGGCGATCGGCTCGGCAGCATCCGCTTACAGCAGGTTTGATGGATCGCCTCGGCAGTATCTCTATCTCTCCAGCAGCCGTGCCTTTGCTGGAAGATTGCAAGATGAGAGGTGTTCAGTTTTGAATCCTGGGAAACTTAAAGAAATTCCAAGGCTGTTTGAGAATCGAAGTTTGGGTTCTAAGAAAAATATGGGGAATAATTGTGATTTGGGGCTATCAGGCCTTGAAATTCAGGAGAAGACAGAAAACAATGTTGAAGAAGTTCCTATTGAAGAGTGGATGGGTCCATCAAATGCAATTGAAAACTAA MPASSPTAIGSAASAYSRFDGSPRQYLYLSSSRAFAGRLQDERCSVLNPGKLKEIPRLFENRSLGSKKNMGNNCDLGLSGLEIQEKTENNVEEVPIEEWMGPSNAIEN Homology
BLAST of Sgr015478 vs. NCBI nr
Match: XP_022145788.1 (putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Momordica charantia] >XP_022145789.1 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Momordica charantia]) HSP 1 Score: 130.6 bits (327), Expect = 8.3e-27 Identity = 65/79 (82.28%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of Sgr015478 vs. NCBI nr
Match: XP_031739958.1 (putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Cucumis sativus] >KGN52984.1 hypothetical protein Csa_015280 [Cucumis sativus]) HSP 1 Score: 122.9 bits (307), Expect = 1.7e-24 Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Sgr015478 vs. NCBI nr
Match: XP_008454119.1 (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Cucumis melo] >XP_008454120.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Cucumis melo]) HSP 1 Score: 121.3 bits (303), Expect = 5.0e-24 Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Sgr015478 vs. NCBI nr
Match: TYK29645.1 (putative RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 121.3 bits (303), Expect = 5.0e-24 Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Sgr015478 vs. NCBI nr
Match: KAA0044516.1 (putative RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 118.6 bits (296), Expect = 3.3e-23 Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Sgr015478 vs. ExPASy Swiss-Prot
Match: F4K1B1 (Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g26760 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 9.9e-07 Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 0
BLAST of Sgr015478 vs. ExPASy TrEMBL
Match: A0A6J1CWB1 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Momordica charantia OX=3673 GN=LOC111015168 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 4.0e-27 Identity = 65/79 (82.28%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of Sgr015478 vs. ExPASy TrEMBL
Match: A0A0A0KVU3 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis sativus OX=3659 GN=Csa_4G009360 PE=3 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 8.4e-25 Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Sgr015478 vs. ExPASy TrEMBL
Match: A0A1S3BXZ9 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo OX=3656 GN=LOC103494620 PE=3 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.4e-24 Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Sgr015478 vs. ExPASy TrEMBL
Match: A0A5D3E2V9 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002570 PE=3 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.4e-24 Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Sgr015478 vs. ExPASy TrEMBL
Match: A0A5A7TQX7 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002560 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.6e-23 Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Sgr015478 vs. TAIR 10
Match: AT5G26760.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF408 (InterPro:IPR007308); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 7.1e-08 Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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