Sgr011841 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr011841
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionUnknown protein
Locationtig00153092: 391110 .. 393766 (+)
RNA-Seq ExpressionSgr011841
SyntenySgr011841
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTAATTGAAGGTCTGAAAGCGTTGAAAAAGGATAACAGAGCACCTGCGTTTGTGAAGTCCGATTCGCTGGAGACGATCCGCTTGTTGAATAGGGAAGACATGTATCTAACTGAAATTTATATGTTTGTTGAGGAAGCCGTTTCTCTCGCTGGGGAAGCTAACGTCATCTCCTTCTCACATACCGGAAGAAGCTGTAATGGGTTTGCTGGGGAAGCTAACGTCATCTCCTTCTCACATACCGGAAGAAGCTGTAATGGGTTTGCTGATACCCTCGCGCGTAGAGGCATGGAGCTAGAACTTAGGGAAGAATGGGAAATGGTTTTTCTAAACTGGCTAGAAAGTCTCGCTAGTGCAGAGTCTGTAGACATGTTTATTTAATGATGTTTTGAGTTTCTGTTTTAAAAAAAAAAAACAGAGTGGTTTTTTTTAATAAATAAAGTACGAGTTGAATAAAAGTTCAAATAAGGCCATAATATAGGCTAAATGTCCATAGTATTTGAGTTTTTTTATTTCTTCTTTTAGTCTTTTAAAATTTTTAATTATTCTTTATGTATTGATTTTTTTAATCAAGTACTTGTAATTGTCACAAAATGTTAAAAGTAACCAATAAAATAATGATGTATTGTCAAAATATATTTTATTAATTGAGTTAGAAATGAGAACATAGACATTATTTAGTGGTTAAGATATTTCTAGTTCTTCTAATAGGTCGTAGATTCAAATTCTCACCTCCCTACTTGTTACTTAATATTCTTAAAAAAAAAAATTGAGTTCAAAATACAATATATTTTAATTTGATGAAATAGACATACCACTTATTCATAAAATAAAAAACTTACGTATTTCATATGACTTAACATGTACTAATTTTCGAGTATATAATTCAGTGGATAAGACACCTATTACCATCTTAAAGGTTTATTGTTCAATCTCTACCCTACAATTACTAAACTAAAAAAAAGTATACTAATTTACTTCACTCAAAATTACTTTTTATTATAAAAAATTGACCTGTTAAAATATTGGTAAAATCAACCCTTGAAAACCTTATAAAAACATATCTAATATGTTTTTCAACACGAGCTTATAACCAAATGCAATGTATAAGAATTTGAACCGAAAACTTTAAGTTAATTGGTATTTATTGATTGAGCCATCTAAATTGACAATTCACGTGTACTGTACAATCATTCATAACATATGTTCTGAATTTTCTCCTGTAAGATAAAAAGGCTACGTTGCAAAGAACTAAACAAAAATCTAACATATATAAAAAAATCTTTACTAAATTAGACTAAAAAAAATTCCTGGCCATCTTTTTCTCATGTTGCTTTCACTTTCCTTCTCATTTTAAAATAAGTGATTTCAAAAGAGGATTCTTTATCCACATCTTCTATGTCTGAACACATTTATTTTTTTCATCAACAAACAATTTGATTTTGAAAAGTCAACATTTTTTTTACAATAAAAATCACCTAAGATATTTTTTTAAAAAAATAAACAATATCGAAATTAAGAAAAAAAACTATCAAAATAAGATTTAATTTTTTTCCTAAAAAAAATAAAATAATAATAACAATAATAATTGTTGTTGTTATTATTTTTATGTTGGAGGGGATGAAGACTGTCAGCATTACCAAATCGTATTCTCAAAAAAAAAAAAAAAAAAAGCATTACCCAATCTGTCATAAATTTGCGATAAGCTTTGGAAAAAAAATGGATATTGTATGCTGACGTGGGTACTGGAATTGAAAAGTGCAAAAAAGTTAATATTACAAAAATGTAATTCTTATTATTTAATAACCAAAATAGCAATGAAAAGAAAAAGAAGCATTGACATGGGACGAAGTTTCTTATATAAATACCAGGCAGACTGCCGACTTCAGAGTGCACATCCTTCCAATTACTGACTTCACATTGTTCAAAAAATTCAGATCTCTCTCTCTCTCTCTCTGATTCTAAGCCTCCAATAGTTTGAAGCTGGCAAGCTGCTTTTGAGTCTCCGCCATCGGTTTCTTCTTCCTCTGTAAGTTCTCTGAGCTTTTGCTGTTCTAATTTGCTGCCTCTCTCTCTGCTTGTGTTTAATTGCTCTGTTTGTTTGGGTGGAAAATGTGAGAATTCGAATTCTTGTTCTGGATTATGCTGACTTCCGTGTGGTAGATAGATCTAGAGAAATGAGCTTTTAATTAGAGATGCTCCTTCTTCGAATAGTGATTCTGAGAATCGAAACACATGAAACGAATTAAACAAGATTTACTAAAGAATCGAAACAGATGTAACGAAGGAAAACAGAATTTACACACATTCCAAACACAATCGGATCTATTACTACGCTATTTATTGGAATGTACTTGCAAACTTCAATTAGAGATGAAAAATGGAGCGGAAAATCAATTAAGCTGTATGAACATATGTGAACAGAGAGAGAGAGAAGTTCAGACGTCGGCGGTGCTGCGCTGCTCGATAATTTGGGAATAGGCGAACGGCAGCGCAGCCGTCCGATACGACCCGTCGAACGGAGTCGCTCTTCGTTACCATTGAGCAAGTGGCTCGCCGGAGCCGACGATCGGCGGCTGACGCTTAAGAAGGTCGTCATGGAACCTCGGATTTGCCGACTGCGGAAGGCGAGAAGGTTCGGTAAGAGTTGTTAG

mRNA sequence

ATGGCTGTAATTGAAGGTCTGAAAGCGTTGAAAAAGGATAACAGAGCACCTGCGTTTGTGAAGTCCGATTCGCTGGAGACGATCCGCTTGTTGAATAGGGAAGACATGTATCTAACTGAAATTTATATGTTTGTTGAGGAAGCCGTTTCTCTCGCTGGGGAAGCTAACGTCATCTCCTTCTCACATACCGGAAGAAGCTGTAATGGGTTTGCTGGGGAAGCTAACGTCATCTCCTTCTCACATACCGGAAGAAGCTGTAATGGGTTTGCTGATACCCTCGCGCGTAGAGGCATGGAGCTAGAACTTAGGGAAGAATGGGAAATGGTTTTTCTAAACTGGCTAGAAAGTCTCGCTAAGAGAGAGAGAAGTTCAGACGTCGGCGGTGCTGCGCTGCTCGATAATTTGGGAATAGGCGAACGGCAGCGCAGCCGTCCGATACGACCCGTCGAACGGAGTCGCTCTTCGTTACCATTGAGCAAGTGGCTCGCCGGAGCCGACGATCGGCGGCTGACGCTTAAGAAGGTCGTCATGGAACCTCGGATTTGCCGACTGCGGAAGGCGAGAAGGTTCGGTAAGAGTTGTTAG

Coding sequence (CDS)

ATGGCTGTAATTGAAGGTCTGAAAGCGTTGAAAAAGGATAACAGAGCACCTGCGTTTGTGAAGTCCGATTCGCTGGAGACGATCCGCTTGTTGAATAGGGAAGACATGTATCTAACTGAAATTTATATGTTTGTTGAGGAAGCCGTTTCTCTCGCTGGGGAAGCTAACGTCATCTCCTTCTCACATACCGGAAGAAGCTGTAATGGGTTTGCTGGGGAAGCTAACGTCATCTCCTTCTCACATACCGGAAGAAGCTGTAATGGGTTTGCTGATACCCTCGCGCGTAGAGGCATGGAGCTAGAACTTAGGGAAGAATGGGAAATGGTTTTTCTAAACTGGCTAGAAAGTCTCGCTAAGAGAGAGAGAAGTTCAGACGTCGGCGGTGCTGCGCTGCTCGATAATTTGGGAATAGGCGAACGGCAGCGCAGCCGTCCGATACGACCCGTCGAACGGAGTCGCTCTTCGTTACCATTGAGCAAGTGGCTCGCCGGAGCCGACGATCGGCGGCTGACGCTTAAGAAGGTCGTCATGGAACCTCGGATTTGCCGACTGCGGAAGGCGAGAAGGTTCGGTAAGAGTTGTTAG

Protein sequence

MAVIEGLKALKKDNRAPAFVKSDSLETIRLLNREDMYLTEIYMFVEEAVSLAGEANVISFSHTGRSCNGFAGEANVISFSHTGRSCNGFADTLARRGMELELREEWEMVFLNWLESLAKRERSSDVGGAALLDNLGIGERQRSRPIRPVERSRSSLPLSKWLAGADDRRLTLKKVVMEPRICRLRKARRFGKSC
Homology
[Close]
BLAST of Sgr011841 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 58.2 bits (139), Expect = 9.4e-05
Identity = 38/105 (36.19%), Postives = 56/105 (53.33%), Query Frame = 0 

Query: 1   MAVIEGLKALKKDNRAPAFVKSDSLETIRLLNREDMYLTEIYMFVEEAVSLAGEANVISF 60
           MA+ EGL+A+++++  P  ++SDSLE I LL+R+    TEI   +EE   +  +  ++S 
Sbjct: 135 MAICEGLRAIRQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSM 194

Query: 61  SHTGRSCNGFAGEANVISFSHTGRSCNGFADTLARRGMELELREE 106
            H  R       EAN +            A  LARR ME +LREE
Sbjct: 195 RHISR-------EANKV------------AHGLARRAMENDLREE 220

[Close]
BLAST of Sgr011841 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.6e-05
Identity = 38/105 (36.19%), Postives = 56/105 (53.33%), Query Frame = 0 

Query: 1   MAVIEGLKALKKDNRAPAFVKSDSLETIRLLNREDMYLTEIYMFVEEAVSLAGEANVISF 60
           MA+ EGL+A+++++  P  ++SDSLE I LL+R+    TEI   +EE   +  +  ++S 
Sbjct: 135 MAICEGLRAIRQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSM 194

Query: 61  SHTGRSCNGFAGEANVISFSHTGRSCNGFADTLARRGMELELREE 106
            H  R       EAN +            A  LARR ME +LREE
Sbjct: 195 RHISR-------EANKV------------AHGLARRAMENDLREE 220

The following BLAST results are available for this feature:
BLAST of Sgr011841 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022143535.19.4e-0536.19uncharacterized protein LOC111013412 [Momordica charantia][more]
BLAST of Sgr011841 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr011841 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CP264.6e-0536.19uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
BLAST of Sgr011841 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..99
e-value: 6.1E-5
score: 25.1
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 2..71
e-value: 1.0E-4
score: 22.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr011841.1Sgr011841.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity