Sed0028154 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGAATCCCTCCGTGGCTAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGTGGGCGGTTCGCTGCCCGCGACGTCGCGAGAAGTCCACTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATGCCTAAACATCAAACGACCCGTGAACACGTTTACAAAACTATTGTGCCGAGGGGGATGCAGCTTCTTTGCTTACCCTCTCTCGGTGCCTAAACAAAACCCCGGCACAGGTCGTGCCAAGGAACTCAAACAAATTCGCTCGCCCCCGCCCCGACCTTGGTGTGTGGGGGTGGAGCATTCTTGTCGTATTATTCACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGA ATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGAATCCCTCCGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGTGGGCGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATGCCTAAACATCAAACGACCCGGGGATGCAGCTTCTTTGCTTACCCTCTCTCGGTGCCTAAACAAAACCCCGGCACAGGTCGTGCCAAGGAACTCAAACAAATTCGCTCGCCCCCGCCCCGACCTTGGTGTGTGGGGGTGGAGCATTCTTGTCGTATTATTCACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGA ATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGAATCCCTCCGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGTGGGCGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATGCCTAAACATCAAACGACCCGGGGATGCAGCTTCTTTGCTTACCCTCTCTCGGTGCCTAAACAAAACCCCGGCACAGGTCGTGCCAAGGAACTCAAACAAATTCGCTCGCCCCCGCCCCGACCTTGGTGTGTGGGGGTGGAGCATTCTTGTCGTATTATTCACAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGA MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEESLRIPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGSRRRGRGRRSRNKVSVGEPAEGSLSMPKHQTTRGCSFFAYPLSVPKQNPGTGRAKELKQIRSPPPRPWCVGVEHSCRIIHNDSRQRISRLSHR Homology
BLAST of Sed0028154 vs. NCBI nr
Match: KAE8637441.1 (hypothetical protein CSA_023571 [Cucumis sativus]) HSP 1 Score: 201.8 bits (512), Expect = 4.5e-48 Identity = 115/164 (70.12%), Postives = 119/164 (72.56%), Query Frame = 0
BLAST of Sed0028154 vs. NCBI nr
Match: KAG9444583.1 (hypothetical protein H6P81_015923 [Aristolochia fimbriata]) HSP 1 Score: 171.8 bits (434), Expect = 5.0e-39 Identity = 88/106 (83.02%), Postives = 91/106 (85.85%), Query Frame = 0
BLAST of Sed0028154 vs. NCBI nr
Match: KAF1855634.1 (hypothetical protein Lal_00048004 [Lupinus albus]) HSP 1 Score: 152.1 bits (383), Expect = 4.1e-33 Identity = 94/174 (54.02%), Postives = 102/174 (58.62%), Query Frame = 0
BLAST of Sed0028154 vs. NCBI nr
Match: XP_024924876.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC112489936 [Ziziphus jujuba]) HSP 1 Score: 146.4 bits (368), Expect = 2.2e-31 Identity = 78/105 (74.29%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Sed0028154 vs. NCBI nr
Match: TXG51768.1 (hypothetical protein EZV62_024292 [Acer yangbiense]) HSP 1 Score: 145.6 bits (366), Expect = 3.8e-31 Identity = 74/84 (88.10%), Postives = 74/84 (88.10%), Query Frame = 0
BLAST of Sed0028154 vs. ExPASy TrEMBL
Match: A0A0A0LPG1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G252100 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 4.0e-58 Identity = 132/191 (69.11%), Postives = 135/191 (70.68%), Query Frame = 0
BLAST of Sed0028154 vs. ExPASy TrEMBL
Match: A0A6A5KZ31 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00048004 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33 Identity = 94/174 (54.02%), Postives = 102/174 (58.62%), Query Frame = 0
BLAST of Sed0028154 vs. ExPASy TrEMBL
Match: A0A6P6FTJ6 (LOW QUALITY PROTEIN: uncharacterized protein LOC112489936 OS=Ziziphus jujuba OX=326968 GN=LOC112489936 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31 Identity = 78/105 (74.29%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Sed0028154 vs. ExPASy TrEMBL
Match: A0A5C7H450 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_024292 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.8e-31 Identity = 74/84 (88.10%), Postives = 74/84 (88.10%), Query Frame = 0
BLAST of Sed0028154 vs. ExPASy TrEMBL
Match: A0A4U5PNX9 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000012910 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 4.1e-31 Identity = 76/102 (74.51%), Postives = 77/102 (75.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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