Homology
BLAST of Sed0027732 vs. NCBI nr
Match:
XP_022998349.1 (signal recognition particle 54 kDa protein 2 [Cucurbita maxima])
HSP 1 Score: 885.2 bits (2286), Expect = 2.6e-253
Identity = 463/492 (94.11%), Postives = 470/492 (95.53%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF K+ K + SGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
BLAST of Sed0027732 vs. NCBI nr
Match:
XP_023523909.1 (signal recognition particle 54 kDa protein 2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523910.1 signal recognition particle 54 kDa protein 2 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023523911.1 signal recognition particle 54 kDa protein 2 isoform X3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 884.8 bits (2285), Expect = 3.4e-253
Identity = 462/492 (93.90%), Postives = 470/492 (95.53%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF K+ K + SGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMR+ARGSGRRIQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRVARGSGRRIQEVMEMME 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
BLAST of Sed0027732 vs. NCBI nr
Match:
XP_022948401.1 (signal recognition particle 54 kDa protein 2-like [Cucurbita moschata])
HSP 1 Score: 882.5 bits (2279), Expect = 1.7e-252
Identity = 461/492 (93.70%), Postives = 469/492 (95.33%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF K+ K + SGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMR+ARGSGRRIQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRVARGSGRRIQEVMEMME 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
BLAST of Sed0027732 vs. NCBI nr
Match:
XP_022955506.1 (signal recognition particle 54 kDa protein 2 [Cucurbita moschata])
HSP 1 Score: 881.7 bits (2277), Expect = 2.8e-252
Identity = 461/492 (93.70%), Postives = 469/492 (95.33%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF K+ K + SGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQ LLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQKLLKMGPISQVFSMLPGFSAEL 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRR+QEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRVQEVMEMME 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
BLAST of Sed0027732 vs. NCBI nr
Match:
XP_038876730.1 (signal recognition particle 54 kDa protein 2 [Benincasa hispida])
HSP 1 Score: 879.0 bits (2270), Expect = 1.8e-251
Identity = 459/492 (93.29%), Postives = 468/492 (95.12%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSIS ALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1 MVLAQLGGSISHALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF K+ K + SGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG KIA EGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+GREKESQAKLKRYMTMMDSMTDEELDS+NPKLMNESRMMRIARGSGRR+QEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLMNESRMMRIARGSGRRVQEVMEMME 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
BLAST of Sed0027732 vs. ExPASy Swiss-Prot
Match:
P49972 (Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)
HSP 1 Score: 846.7 bits (2186), Expect = 1.3e-244
Identity = 438/492 (89.02%), Postives = 460/492 (93.50%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLA+LGGSISRALQQMSNAT+IDEKVLNECLNEITRALLQ+DVQFKLVRDM TNIKKIV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NLDDLAAGHNKR+IIQQAVFNELCK+LDPGKPSF K+ K + SGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG KIA +GVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMY+QFQN+LKMGPI QVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+GRE ESQAK+KRYMTMMDSMT+EELDSSNPKLM +SR+MRIARGSGR++ EVM+MME
Sbjct: 361 MPKGRENESQAKIKRYMTMMDSMTNEELDSSNPKLMTDSRIMRIARGSGRQVHEVMDMME 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAK+WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQ+LMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM 480
BLAST of Sed0027732 vs. ExPASy Swiss-Prot
Match:
P49971 (Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)
HSP 1 Score: 815.8 bits (2106), Expect = 2.5e-235
Identity = 424/493 (86.00%), Postives = 456/493 (92.49%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSISRALQQMSNAT+IDEKVLNECLNEITRALLQ+DVQFKLVRDM TNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMSTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NL+DLAAGHNKR+IIQQAV+NELCK+LDPGKP+F K+ K + SGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVYNELCKILDPGKPAFTLKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGRS------CKIAEEGVERF 180
YAYHHQK+GWKPALVCADTFRAGAFDQLKQNATKAKIPFYG S KIA +GVE F
Sbjct: 121 YAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKIAVDGVETF 180
Query: 181 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KKENCDLIIVDTSGRHKQEAALFEEMRQVSEA KPDLVIFVMDSSIGQAAFDQAQAF+QS
Sbjct: 181 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQS 240
Query: 241 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VAVGAVIVTKMDGHAKGGGALS VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 241 VAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAE 360
SG ++KI +VVPMDQQPELLQKLSEGHFTLRIMY+QFQ++LKMGP+ VFSMLPGF AE
Sbjct: 301 LSGLVNKIQDVVPMDQQPELLQKLSEGHFTLRIMYEQFQSMLKMGPLG-VFSMLPGFSAE 360
Query: 361 LMPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMM 420
+MPQGREKESQAK KRYMTMMDSMTDEELDS+NPK++ ESR+MRIARGSGR + EVMEM+
Sbjct: 361 MMPQGREKESQAKFKRYMTMMDSMTDEELDSTNPKILTESRIMRIARGSGRLVHEVMEML 420
Query: 421 EEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQ 480
EEYKRLAK++SKMKGLKIPKKG+MS+LSRNMNAQ+MSKVLPPQMLKQIGGMGGLQ+LMKQ
Sbjct: 421 EEYKRLAKIFSKMKGLKIPKKGDMSSLSRNMNAQNMSKVLPPQMLKQIGGMGGLQNLMKQ 480
BLAST of Sed0027732 vs. ExPASy Swiss-Prot
Match:
P49967 (Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana OX=3702 GN=SRP-54C PE=2 SV=2)
HSP 1 Score: 811.6 bits (2095), Expect = 4.7e-234
Identity = 412/492 (83.74%), Postives = 454/492 (92.28%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLA+LGG I+RA+QQMSN T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F K+ K + +GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYG KIA EGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGF+DK+ EVVP DQQPELL+KLS+G+FTLRIMYDQFQN+L MGP+ +VFSMLPG AE+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+G EKESQAK+KRYMTMMDSMT++ELDSSNPK+ NESRMMRIARGSGR+++EVMEM+E
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLE 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAK+WSKMKGLKIPK G+MSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
BLAST of Sed0027732 vs. ExPASy Swiss-Prot
Match:
P49968 (Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare OX=4513 GN=SRP54-1 PE=2 SV=1)
HSP 1 Score: 751.5 bits (1939), Expect = 5.8e-216
Identity = 390/492 (79.27%), Postives = 438/492 (89.02%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSISRAL QMSNATVIDEKVL ECLNEI+RALLQSDVQFK+VRDMQTNI+KIV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NL+ LAAG NKR+IIQQAVF ELC MLDPGKP+F TK+ K + SGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTTKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYG KIA EG+ERF+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN DLII+DTSGRHKQEAALFEEMRQV+EATKPDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SG MDKI +V+P DQQPELL KL+EG FTLR++Y+QFQNLLKMGPI QVFSMLPGF +EL
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+G EKE QAK+KRYMT+MDSMT ELDS+NPKLM ESR++RIARGSGR+I++V +M+E
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSGRQIRDVTDMLE 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LPPQ+LKQ+GGMGGLQ+LMKQM
Sbjct: 421 EYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGMGGLQALMKQM 480
BLAST of Sed0027732 vs. ExPASy Swiss-Prot
Match:
P49969 (Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare OX=4513 GN=SRP54-2 PE=2 SV=1)
HSP 1 Score: 749.2 bits (1933), Expect = 2.9e-215
Identity = 389/492 (79.07%), Postives = 437/492 (88.82%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSISRAL QMSNATVIDEKVL ECLNEI+RALLQSDVQFK+VRDMQTNI+KIV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NL+ LAAG NKR+IIQQAVF ELC MLDPGKP+F K+ K + SGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYG KIA EG+ERF+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN DLII+DTSGRHKQEAALFEEMRQV+EATKPDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SG MDKI +V+P DQQPELL KL+EG FTLR++Y+QFQNLLKMGPI QVFSMLPGF +EL
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+G EKE QAK+KRYMT+MDSMT ELDS+NPKLM ESR++RIARGSGR+I++V +M+E
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSGRQIRDVTDMLE 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LPPQ+LKQ+GGMGGLQ+LMKQM
Sbjct: 421 EYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGMGGLQALMKQM 480
BLAST of Sed0027732 vs. ExPASy TrEMBL
Match:
A0A6J1KE35 (Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111493016 PE=3 SV=1)
HSP 1 Score: 885.2 bits (2286), Expect = 1.2e-253
Identity = 463/492 (94.11%), Postives = 470/492 (95.53%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF K+ K + SGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
BLAST of Sed0027732 vs. ExPASy TrEMBL
Match:
A0A6J1G940 (Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111452092 PE=3 SV=1)
HSP 1 Score: 882.5 bits (2279), Expect = 8.1e-253
Identity = 461/492 (93.70%), Postives = 469/492 (95.33%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF K+ K + SGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMR+ARGSGRRIQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRVARGSGRRIQEVMEMME 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
BLAST of Sed0027732 vs. ExPASy TrEMBL
Match:
A0A6J1GTY4 (Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111457512 PE=3 SV=1)
HSP 1 Score: 881.7 bits (2277), Expect = 1.4e-252
Identity = 461/492 (93.70%), Postives = 469/492 (95.33%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF K+ K + SGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQ LLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQKLLKMGPISQVFSMLPGFSAEL 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRR+QEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRVQEVMEMME 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
BLAST of Sed0027732 vs. ExPASy TrEMBL
Match:
A0A6J1IYF3 (Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111479604 PE=3 SV=1)
HSP 1 Score: 875.2 bits (2260), Expect = 1.3e-250
Identity = 458/492 (93.09%), Postives = 467/492 (94.92%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF K+ K + SGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLK+GPISQVFSMLP F AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKIGPISQVFSMLPRFSAEL 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRR+QEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRVQEVMEMME 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMK M
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKHM 480
BLAST of Sed0027732 vs. ExPASy TrEMBL
Match:
A0A6J1DKQ8 (Signal recognition particle 54 kDa protein OS=Momordica charantia OX=3673 GN=LOC111020969 PE=3 SV=1)
HSP 1 Score: 874.8 bits (2259), Expect = 1.7e-250
Identity = 460/493 (93.31%), Postives = 470/493 (95.33%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF K+ K + SGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YA++HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG KIA EGVERFK
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGF-GAE 360
SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQ+LLKMGPISQVFSMLPGF GAE
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQSLLKMGPISQVFSMLPGFGGAE 360
Query: 361 LMPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMM 420
LMP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMM
Sbjct: 361 LMPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMM 420
Query: 421 EEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQ 480
EEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQ
Sbjct: 421 EEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQ 480
BLAST of Sed0027732 vs. TAIR 10
Match:
AT1G48900.1 (Signal recognition particle, SRP54 subunit protein )
HSP 1 Score: 811.6 bits (2095), Expect = 3.4e-235
Identity = 412/492 (83.74%), Postives = 454/492 (92.28%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLA+LGG I+RA+QQMSN T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F K+ K + +GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYG KIA EGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGF+DK+ EVVP DQQPELL+KLS+G+FTLRIMYDQFQN+L MGP+ +VFSMLPG AE+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+G EKESQAK+KRYMTMMDSMT++ELDSSNPK+ NESRMMRIARGSGR+++EVMEM+E
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLE 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKRLAK+WSKMKGLKIPK G+MSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
BLAST of Sed0027732 vs. TAIR 10
Match:
AT5G49500.1 (Signal recognition particle, SRP54 subunit protein )
HSP 1 Score: 711.8 bits (1836), Expect = 3.6e-205
Identity = 369/494 (74.70%), Postives = 421/494 (85.22%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLA+LGG I A+Q+M+N T+IDEK LN+CLNEITRALLQSDV F LV++MQTNIKKIV
Sbjct: 1 MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERK----------NKWSGKTTTC 120
NL+DLAAGHNKR+II+QA+F+ELCKMLDPGK +F K+ K + K
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLV 120
Query: 121 TKYAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVER 180
++KG+KPALVCADTFRAGAFDQLKQNATK+KIP+YG KIA EGV+R
Sbjct: 121 PSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDR 180
Query: 181 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQ 240
FKKENCDLIIVDTSGRHKQ+A+LFEEMRQ+SEATKPDLVIFVMDSSIGQ AF+QA+AFKQ
Sbjct: 181 FKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQ 240
Query: 241 SVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 300
+VAVGAVI+TKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KPFVSRLLG G
Sbjct: 241 TVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNG 300
Query: 301 DWSGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGA 360
D SGF++K+ EVVP DQQPELL+ LS G FTLRIMYDQFQN+L MGP+ +VFSMLPG A
Sbjct: 301 DMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGMRA 360
Query: 361 ELMPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEM 420
E+MP+G EKESQAK+KRYMTMMDSMT+EELDSSNPK+ NESR+MRIARGSGR ++EVMEM
Sbjct: 361 EMMPEGHEKESQAKIKRYMTMMDSMTNEELDSSNPKVFNESRIMRIARGSGRIVREVMEM 420
Query: 421 MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMK 480
+EEYKRL +W K+KGLK +KG MSALS+N N+Q +SKVLP QMLKQIGGM GLQSLMK
Sbjct: 421 LEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQMLKQIGGMSGLQSLMK 480
BLAST of Sed0027732 vs. TAIR 10
Match:
AT1G15310.1 (signal recognition particle 54 kDa subunit )
HSP 1 Score: 698.4 bits (1801), Expect = 4.1e-201
Identity = 367/492 (74.59%), Postives = 420/492 (85.37%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLA+LGG I+RA+QQM+N T+IDEKVLN+ LNEITRALLQSDV F LV MQTNIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NLDDLAAGHNKR II+QA+F ELC+MLDPGKP+F K+ K + +GKTTTCTK
Sbjct: 61 NLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKG+K ALVCADTFRAGAFDQLKQNATKAKIPFYG KIA EGV+RFK
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE CDLIIVDTSGRHKQ A+LFEEMRQV+EAT+PDLVIFVMDSSIGQAAF+QA+AFK++V
Sbjct: 181 KEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SG +DK+ EVVP D Q EL++ LS+G+FTLR MYDQFQ L++ P++Q+FSMLPG AE+
Sbjct: 301 SGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQLFSMLPGISAEM 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
MP+G +ES+ K+KRYMTMMDSMT++ELDS NPK+ NESR+MRIARGSGR ++EVMEM+E
Sbjct: 361 MPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLE 420
Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
EYKR+AK MKG+KIPK G+ MSKV+PPQMLKQ+GGM GLQSLMKQM
Sbjct: 421 EYKRIAKT---MKGIKIPKNGD------------MSKVIPPQMLKQMGGMSGLQSLMKQM 476
BLAST of Sed0027732 vs. TAIR 10
Match:
AT1G48900.2 (Signal recognition particle, SRP54 subunit protein )
HSP 1 Score: 676.8 bits (1745), Expect = 1.3e-194
Identity = 342/418 (81.82%), Postives = 382/418 (91.39%), Query Frame = 0
Query: 1 MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
MVLA+LGG I+RA+QQMSN T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F K+ K + +GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
YAY+HQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYG KIA EGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
SGF+DK+ EVVP DQQPELL+KLS+G+FTLRIMYDQFQN+L MGP+ +VFSMLPG AE+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360
Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEM 406
MP+G EKESQAK+KRYMTMMDSMT++ELDSSNPK+ NESRMMRIARGSGR+++EVME+
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEI 418
BLAST of Sed0027732 vs. TAIR 10
Match:
AT5G03940.1 (chloroplast signal recognition particle 54 kDa subunit )
HSP 1 Score: 178.3 bits (451), Expect = 1.4e-44
Identity = 133/464 (28.66%), Postives = 228/464 (49.14%), Query Frame = 0
Query: 2 VLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVN 61
+ QL G + A ++ V+ + + E + +I RALL++DV +VR ++
Sbjct: 77 MFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAV 136
Query: 62 LDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN---------KWSGKTTTCTK 121
+ G + + + V +EL K++ G+ S + + GKTT C K
Sbjct: 137 GMGVIRGVKPDQQLVKIVHDELVKLMG-GEVSELQFAKSGPTVILLAGLQGVGKTTVCAK 196
Query: 122 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG-----RSCKIAEEGVERFK 181
A + +K+G L+ D +R A DQL + +P Y + IA++G++ K
Sbjct: 197 LACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAK 256
Query: 182 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
K N D++I+DT+GR + + + +E++ V + P V+ V+D+ GQ A F +
Sbjct: 257 KNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEI 316
Query: 242 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+ I+TK+DG ++GG ALS + P+ +G GE M++ E F R+LGMGD
Sbjct: 317 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 376
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 361
F++K EV+ + +L +K+ F Q + + KMG +++V M+PG G
Sbjct: 377 LSFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVS 436
Query: 362 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNES--RMMRIARGSGRRIQEVMEM 421
Q RE E + M++ MT EE + P+L+ ES R RIA+ SG+ Q+V +
Sbjct: 437 PAQIREAEKNLLVME--AMIEVMTPEERE--RPELLAESPERRKRIAKDSGKTEQQVSAL 496
Query: 422 MEEYKRLAKVWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPP 449
+ + + ++ KMK L + + G + ALS +A + PP
Sbjct: 497 VAQ---IFQMRVKMKNLMGVMEGGSIPALSGLEDALKAEQKAPP 532
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022998349.1 | 2.6e-253 | 94.11 | signal recognition particle 54 kDa protein 2 [Cucurbita maxima] | [more] |
XP_023523909.1 | 3.4e-253 | 93.90 | signal recognition particle 54 kDa protein 2 isoform X1 [Cucurbita pepo subsp. p... | [more] |
XP_022948401.1 | 1.7e-252 | 93.70 | signal recognition particle 54 kDa protein 2-like [Cucurbita moschata] | [more] |
XP_022955506.1 | 2.8e-252 | 93.70 | signal recognition particle 54 kDa protein 2 [Cucurbita moschata] | [more] |
XP_038876730.1 | 1.8e-251 | 93.29 | signal recognition particle 54 kDa protein 2 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
P49972 | 1.3e-244 | 89.02 | Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum OX=4081 PE=... | [more] |
P49971 | 2.5e-235 | 86.00 | Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum OX=4081 PE=... | [more] |
P49967 | 4.7e-234 | 83.74 | Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana OX=3702 GN=... | [more] |
P49968 | 5.8e-216 | 79.27 | Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare OX=4513 GN=SRP54... | [more] |
P49969 | 2.9e-215 | 79.07 | Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare OX=4513 GN=SRP54... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KE35 | 1.2e-253 | 94.11 | Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1G940 | 8.1e-253 | 93.70 | Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC1... | [more] |
A0A6J1GTY4 | 1.4e-252 | 93.70 | Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC1... | [more] |
A0A6J1IYF3 | 1.3e-250 | 93.09 | Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1DKQ8 | 1.7e-250 | 93.31 | Signal recognition particle 54 kDa protein OS=Momordica charantia OX=3673 GN=LOC... | [more] |
Match Name | E-value | Identity | Description | |
AT1G48900.1 | 3.4e-235 | 83.74 | Signal recognition particle, SRP54 subunit protein | [more] |
AT5G49500.1 | 3.6e-205 | 74.70 | Signal recognition particle, SRP54 subunit protein | [more] |
AT1G15310.1 | 4.1e-201 | 74.59 | signal recognition particle 54 kDa subunit | [more] |
AT1G48900.2 | 1.3e-194 | 81.82 | Signal recognition particle, SRP54 subunit protein | [more] |
AT5G03940.1 | 1.4e-44 | 28.66 | chloroplast signal recognition particle 54 kDa subunit | [more] |