Sed0027732 (gene) Chayote v1

Overview


Name	Sed0027732
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Signal recognition particle 54 kDa protein
Location	LG06: 44850227 .. 44855630 (-)
RNA-Seq Expression	Sed0027732
Synteny	Sed0027732

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTAGCACAGCTTGGAGGGAGCATCTCCCGTGCTCTCCAGCAGATGAGCAATGCGACGGTGATCGACGAGAAGGTTTTGAACGAATGTCTCAACGAGATCACCCGCGCTCTTCTCCAATCCGATGTTCAATTCAAGCTTGTTCGCGATATGCAGACCAATATCAAGAAAATCGTCAATCTCGACGACCTCGCCGCCGGTCATAATAAGCGCAAGATCATTCAACAAGTATGTTTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTGGCGTTGTAGGGATAATTTATGAAACTAAAGTTGATTGGTGGGAGATGTAGCTTGTTTTGCCATATCATAGCGCTCAATGACTTTGGAAATTCACGTCCGAAAAGTTGATTATGTACTATGAAAATCTTAGGGAAATGAAAAATCTTTGCAGCCTAGTTAATTGATTTTTTCTTTGTCGAATTTTGTGTGTGGTACGATATGTTTAGGGATTTTTATAGTTTGGGGTTGATGTTGAGCTTTTTTTTTTTTTGAAGAACAATGCTGTTGTTGGGATAACTGGCCTTTATAACTCTACAGTTGGTTAGTAATTCTGAGGGCATTGTTGTTATGTGGGATTCTTGGGCTTTGTTCTATTTTAGAGATGGTAGAGGTTTTTTCACCTTATCCATTTTCTTTGGCTGCTTGGATGATCGGCATGTTTGAATTTTTTGGTGCTCATGGCTCGTCACCTAAAGGATGCTATGCATTTTGGATGATTCGGTAGTCTTTTGGTCTCGGTTGCAACTTTTGGCATTTGTTTGAGGATTTTGCCATAAATAGAATTTCTTTTTCTTTTATATGGTCTCTCAGTAGGTTTATTGTAGCTTGGTTCATACTCACCTGCATAGGTCTTTCACATGGTCGAATCTTTATGCTTAATACCGATCAGCTGTAGGGCAGACCTATTCCTCCCTTTCTAGATGTCGTATAGATTAGATTCGATTCTTTTGAACATCAAACAATCTTAAAATCCTAGATTAATTTCGGGTCTTTGGTCTATCTTGTTGTGGACTTGTTTTGTTAAATGGTAACTTCCCCTTTTGGATGACTTCGATGAAAGGAGTGATTTCTCTAAAAAAAAGAAGCTGATGAAAGAGATTGCCAATCTCAATTGTCTGAATTTTTATTAAAAAGAGGAACAAGTTGTAGACAGTAAAAACAAAACTGAAATGAATAGAGGAAGATTATTGCTATACTTCGTTCTTTACCCAGAGTAACTGTTTTTGTAACCAACCAAGGTTAATTTCCAACAGTTAGTATTTGTAAATCTGTATCCCACATCATTTTTACAACTTTTTATGATATTAAAACCATGATGAACAACTTCACTTGTTTTGTTCCTTACTTTTGCCATATTATAATTCTGCCGTTGTTACACATCACATTTCTTTTGGTGGACATCTTTAGAATCTTTGTACAGAATCCATCTAATGCAACTCTTAACTCACCTATTTTAAGATTTACTTATTTCATACAATTTAATGGGTTTGAAGAGGTTTTATTTTCTCTCTGCAGGCTGTATTTAATGAATTGTGCAAAATGCTGGATCCTGGGAAGCCTTCTTTTTACACCAAAGAAAGGAAAAACAAGTGTTGTCATGTTTGTTGGTTTGCAAGGTATGTCAGCCGTAAGTTTGTTGTCTTCAGTACTTGTTTAATGATCCACTTAAATGGGGCATTCTGGCATTTTAAATGATGAGGGTTGGTTTCTGTTATCATCATTAGTTCACTATTAGAATCTGACAAGGTGAAATCTAAAGCTACCATCAGGAATTTTTTCTTATCATGATTGAGCATCTGAAAATTTCTAGTTATATGTTTATTTAGTTTAAGGATTTTTCTCATCACACATTCTTGTTGAGTTATATTGCTTAATCCATAAAATCAATTTTTAAAGTTTACTCTTTTCACTTTTTTTTTTTTCTGTATTAACTAATTAGTAATTAGTATATACTATTTAAAATTTCTAAAATTCAGGGTCTGGCAAAACCACAACATGTACAAAGTATGCATATCATCATCAGAAGAAAGGCTGGAAGCCAGCTTTGGTGTGTGCAGATACGTTCAGAGCTGGTGCTTTTGATCAACTAAAGCAAAATGCAACAAAAGCTAAGATTCCCTTTTATGGAAGGTAGTACATACATATTATTGGGTTGACTGTGTATTTCTATGATCATGGAAGCATGGTTTTATTGAAAAAAAAACTACATCGTAATCCTTTGAGACAGTGTTGTCCTCTTTAGAACTTTTCTTGCTGAGAGAAAACTACTTTCTTCAGTTCTTGTATGCATTGATCCTTTTGTTTGATAGTGTTGGATTTTTTTGCTTTCTTTATTCTAGCATAGCATGTTTATGATATGGTTGAGATTGGGGTGGGTGAGGTATGGAATGAGGTATATGTCTAGTTTTAGATTTTGGCGTATCCTGGACCATAAAAATGTATATTCATATGTGTGGGCATTTCCTCATTTCCTTTTTCTTTTCTTTTACTTTTATACATCAACTGATCAAAGTTCTCTTCCTGCAGTGTGCACGATTTATTCATCATGGTGTCATTCAGTATTTCATTTATTCTTTGTTTCCCCCTCTTGTAGTTACATGGAGTCAGATCCTGTAAAATTGCGGAGGAAGGTGTGGAGAGGTTCAAGAAAGAAAATTGTGATCTCATAATTGTTGATACCAGTGGGCGTCACAAACAAGAAGCTGCTCTTTTTGAAGAAATGCGTCAAGTTTCTGAAGCAACGGTATTTTTCAGTATACTTACTATTTCATGACTATTTTGGGATAAGCGTGGTTACCCTTGTTTCAAAAAACTATTTCTTGACTATTTGATGACGACTTGTTAACATTCCGGACTGTTATTTGGCTCTTCCAGAAGCCAGATCTTGTTATATTTGTTATGGATAGCAGTATTGGCCAGGCAGCATTTGACCAAGCTCAAGCATTCAAACAAAGTGTTGCAGTTGGTGCTGTGATTGTGACCAAAATGGATGGTCACGCAAAGGGAGGTGGTGCTCTTAGTGCGTAAGTTTTCAAAGCTGTTTTCTTGTGTTTTGGATGAAAAACCGTCAACGGTCGGAAACTCCATTTGCCGAACCTTTGTTTTGGTCTGTAGTTTGTGATCCTTATGGAACATATCTGGTGATATTCTTCAGATTTATTGTTTGGTTAAGTATCTGTCACGGTAACCTAATCAAATTGATATTTAGAAGGATATTTTTGTCAAAATTTGTTTTAGACTTGTGGTTGTCTTTCTCTCGATTCACTAATGTGTGCATTCTATTTTTATCAAGGAAAGATATATGGATGAACAGTGAATCGATGAGCTAATTCTCTTTCTAATTATGGTTGCAGAGTTGCAGCAACAAAGAGTCCAGTCATTTTCATTGGAACCGGAGAACACATGGATGAGTTTGAAGTTTTTGACGTCAAACCATTTGTCAGCCGTCTTTTAGGTGCTTTGTCTATTGAATCTAAACTTGTTTTCTCCTGTTGCCTAATGTTTCCTATTCATTAAGCAACTATGTTATTTAATTAGGCATGGGAGACTGGTCGGGATTCATGGATAAAATTCATGAAGTTGTGCCAATGGATCAGCAACCAGAGCTTTTGCAAAAGCTCTCAGAAGGACATTTTACTTTGAGAATTATGTATGACCAGTTTCAGAACTTGCTTAAGATGGGCCCTATTAGCCAGGTATTAACTATTATTCAATCTCAATATAATACACAGTTTTATTATTTGCTTATCCCATAATTTTGGAGAAAAAGTAGGTTAATCGTTTGAATTTCTAAACGTTCATCATAGTAAAAATTGCTTCTCAGTCCTAAACTTTACACTGCTAAGATTAAAAATATTGACATAAATCTTACAAACACAAAACAAACAAAAAAGACATAAATCTTAGAAATACGGTTTGGCTTTCAATATGACACTTTATAGGGGAAGGCAGATGTGTATTGTAACTTGCTTAAGCAAATTTATTATAGGTTTAGCTATAAGCATCATGGAGTGGCCTAGCCTAGTGGTCAAGAGTGTCTTGGAAAATTAAGAGGGGATGGATTTAATCCATGGTAGCCACCTAGGTATCTATGACTTTATTTCCTACAGATTTCCTTAACATCCAAATATTGTAGGGTCATGTTGTATGTCTTGTTACATTGAGATTGCGCTCAAGTTGGCTCACATAGTCATGGATATAAAAAAAAGGTTTTTCTATGCATTTTAAATTACAGAAGTGTTTCTTCTGCAGCTTTAATAGTAAATAGATAGCCCAGTTCACGGGATACACAACTGAGCAAATGCATGTTCTTATGGAATTTGAACACAGGCATGCTTCACCGCTTGATTGATTTTTTCTTTATATCCGTGAGTGTTCGGGTTAGTTTACGTGCATCTTCATTATTCTGACGGAGTGACTCTCTGGTTTACTACATTTGGTTGTCAATGTAATTGTATGAAATTAATTCATAGGATGGTAACCACTATGAATTGAACCCATAAACTTTAAGCACCTTATATTTACAAGGTTTTTGTTTTTACCTCGAGTCTAGATGGTTTGATCGTATTGCAGTTTTTCATTTACCATCATGGAGTGGCTCAAGTGGTCAAAGAGGGCCTTGGAGTGCTTAAGGTGATGGATTCAATCCATGGTGGCCACCTATTTAGGAATAAATTTCCTACGAGTTTCCTTGACATCTGTAGGGTCAGGCGGTAATATCCCGTGACATTAGGTGCATGTAAGCTGGCTCAGATAGTCACAAATATCAAAAATAAAAACCCTTCTTAAAACAGGCATAAGCGTTATTCTAAGAATCGGTCTGTTTAGGTATTTTCAATGCTTCCTGGATTTGGTGCTGAATTGATGCCACAAGGACGTGAAAAGGAAAGCCAGGCTAAACTAAAACGCTACATGACCATGATGGACTCGATGACGGATGAAGGCAAGCAAAAACAATCCACGTGTCCTTCCCTTTATTTTTCTTGCTATAAATGAATTTTTGTTTGGGATCCTGATACACGGATTTATTATTGTTAACAGAATTGGATAGCTCAAACCCAAAGCTCATGAACGAGTCACGAATGATGCGAATAGCGCGAGGTTCAGGTCGCCGAATTCAGGAAGTAATGGAAATGATGGAAGAGTACAAGCGGCTCGCCAAGGTATGGAGCAAGATGAAAGGGCTGAAGATCCCGAAGAAGGGCGAAATGAGTGCACTATCGCGAAACATGAACGCACAGCACATGAGCAAGGTCCTTCCTCCCCAGATGTTGAAGCAAATTGGTGGAATGGGTGGTCTACAGAGCTTGATGAAGCAAATGGGTTCGAACAAAGATATGATGGGGATGTTTGGAGGAGACAAGTAG

mRNA sequence

ATGGTGTTAGCACAGCTTGGAGGGAGCATCTCCCGTGCTCTCCAGCAGATGAGCAATGCGACGGTGATCGACGAGAAGGTTTTGAACGAATGTCTCAACGAGATCACCCGCGCTCTTCTCCAATCCGATGTTCAATTCAAGCTTGTTCGCGATATGCAGACCAATATCAAGAAAATCGTCAATCTCGACGACCTCGCCGCCGGTCATAATAAGCGCAAGATCATTCAACAAGCTGTATTTAATGAATTGTGCAAAATGCTGGATCCTGGGAAGCCTTCTTTTTACACCAAAGAAAGGAAAAACAAGTGGTCTGGCAAAACCACAACATGTACAAAGTATGCATATCATCATCAGAAGAAAGGCTGGAAGCCAGCTTTGGTGTGTGCAGATACGTTCAGAGCTGGTGCTTTTGATCAACTAAAGCAAAATGCAACAAAAGCTAAGATTCCCTTTTATGGAAGATCCTGTAAAATTGCGGAGGAAGGTGTGGAGAGGTTCAAGAAAGAAAATTGTGATCTCATAATTGTTGATACCAGTGGGCGTCACAAACAAGAAGCTGCTCTTTTTGAAGAAATGCGTCAAGTTTCTGAAGCAACGAAGCCAGATCTTGTTATATTTGTTATGGATAGCAGTATTGGCCAGGCAGCATTTGACCAAGCTCAAGCATTCAAACAAAGTGTTGCAGTTGGTGCTGTGATTGTGACCAAAATGGATGGTCACGCAAAGGGAGGTGGTGCTCTTAGTGCAGTTGCAGCAACAAAGAGTCCAGTCATTTTCATTGGAACCGGAGAACACATGGATGAGTTTGAAGTTTTTGACGTCAAACCATTTGTCAGCCGTCTTTTAGGCATGGGAGACTGGTCGGGATTCATGGATAAAATTCATGAAGTTGTGCCAATGGATCAGCAACCAGAGCTTTTGCAAAAGCTCTCAGAAGGACATTTTACTTTGAGAATTATGTATGACCAGTTTCAGAACTTGCTTAAGATGGGCCCTATTAGCCAGGTATTTTCAATGCTTCCTGGATTTGGTGCTGAATTGATGCCACAAGGACGTGAAAAGGAAAGCCAGGCTAAACTAAAACGCTACATGACCATGATGGACTCGATGACGGATGAAGAATTGGATAGCTCAAACCCAAAGCTCATGAACGAGTCACGAATGATGCGAATAGCGCGAGGTTCAGGTCGCCGAATTCAGGAAGTAATGGAAATGATGGAAGAGTACAAGCGGCTCGCCAAGGTATGGAGCAAGATGAAAGGGCTGAAGATCCCGAAGAAGGGCGAAATGAGTGCACTATCGCGAAACATGAACGCACAGCACATGAGCAAGGTCCTTCCTCCCCAGATGTTGAAGCAAATTGGTGGAATGGGTGGTCTACAGAGCTTGATGAAGCAAATGGGTTCGAACAAAGATATGATGGGGATGTTTGGAGGAGACAAGTAG

Coding sequence (CDS)

ATGGTGTTAGCACAGCTTGGAGGGAGCATCTCCCGTGCTCTCCAGCAGATGAGCAATGCGACGGTGATCGACGAGAAGGTTTTGAACGAATGTCTCAACGAGATCACCCGCGCTCTTCTCCAATCCGATGTTCAATTCAAGCTTGTTCGCGATATGCAGACCAATATCAAGAAAATCGTCAATCTCGACGACCTCGCCGCCGGTCATAATAAGCGCAAGATCATTCAACAAGCTGTATTTAATGAATTGTGCAAAATGCTGGATCCTGGGAAGCCTTCTTTTTACACCAAAGAAAGGAAAAACAAGTGGTCTGGCAAAACCACAACATGTACAAAGTATGCATATCATCATCAGAAGAAAGGCTGGAAGCCAGCTTTGGTGTGTGCAGATACGTTCAGAGCTGGTGCTTTTGATCAACTAAAGCAAAATGCAACAAAAGCTAAGATTCCCTTTTATGGAAGATCCTGTAAAATTGCGGAGGAAGGTGTGGAGAGGTTCAAGAAAGAAAATTGTGATCTCATAATTGTTGATACCAGTGGGCGTCACAAACAAGAAGCTGCTCTTTTTGAAGAAATGCGTCAAGTTTCTGAAGCAACGAAGCCAGATCTTGTTATATTTGTTATGGATAGCAGTATTGGCCAGGCAGCATTTGACCAAGCTCAAGCATTCAAACAAAGTGTTGCAGTTGGTGCTGTGATTGTGACCAAAATGGATGGTCACGCAAAGGGAGGTGGTGCTCTTAGTGCAGTTGCAGCAACAAAGAGTCCAGTCATTTTCATTGGAACCGGAGAACACATGGATGAGTTTGAAGTTTTTGACGTCAAACCATTTGTCAGCCGTCTTTTAGGCATGGGAGACTGGTCGGGATTCATGGATAAAATTCATGAAGTTGTGCCAATGGATCAGCAACCAGAGCTTTTGCAAAAGCTCTCAGAAGGACATTTTACTTTGAGAATTATGTATGACCAGTTTCAGAACTTGCTTAAGATGGGCCCTATTAGCCAGGTATTTTCAATGCTTCCTGGATTTGGTGCTGAATTGATGCCACAAGGACGTGAAAAGGAAAGCCAGGCTAAACTAAAACGCTACATGACCATGATGGACTCGATGACGGATGAAGAATTGGATAGCTCAAACCCAAAGCTCATGAACGAGTCACGAATGATGCGAATAGCGCGAGGTTCAGGTCGCCGAATTCAGGAAGTAATGGAAATGATGGAAGAGTACAAGCGGCTCGCCAAGGTATGGAGCAAGATGAAAGGGCTGAAGATCCCGAAGAAGGGCGAAATGAGTGCACTATCGCGAAACATGAACGCACAGCACATGAGCAAGGTCCTTCCTCCCCAGATGTTGAAGCAAATTGGTGGAATGGGTGGTCTACAGAGCTTGATGAAGCAAATGGGTTCGAACAAAGATATGATGGGGATGTTTGGAGGAGACAAGTAG

Protein sequence

MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKNKWSGKTTTCTKYAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGRSCKIAEEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAELMPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQMGSNKDMMGMFGGDK

Homology

[Close]

BLAST of Sed0027732 vs. NCBI nr
Match: XP_022998349.1 (signal recognition particle 54 kDa protein 2 [Cucurbita maxima])

HSP 1 Score: 885.2 bits (2286), Expect = 2.6e-253
Identity = 463/492 (94.11%), Postives = 470/492 (95.53%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF  K+ K         + SGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

[Close]

BLAST of Sed0027732 vs. NCBI nr
Match: XP_023523909.1 (signal recognition particle 54 kDa protein 2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523910.1 signal recognition particle 54 kDa protein 2 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023523911.1 signal recognition particle 54 kDa protein 2 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 884.8 bits (2285), Expect = 3.4e-253
Identity = 462/492 (93.90%), Postives = 470/492 (95.53%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF  K+ K         + SGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMR+ARGSGRRIQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRVARGSGRRIQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

[Close]

BLAST of Sed0027732 vs. NCBI nr
Match: XP_022948401.1 (signal recognition particle 54 kDa protein 2-like [Cucurbita moschata])

HSP 1 Score: 882.5 bits (2279), Expect = 1.7e-252
Identity = 461/492 (93.70%), Postives = 469/492 (95.33%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF  K+ K         + SGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMR+ARGSGRRIQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRVARGSGRRIQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

[Close]

BLAST of Sed0027732 vs. NCBI nr
Match: XP_022955506.1 (signal recognition particle 54 kDa protein 2 [Cucurbita moschata])

HSP 1 Score: 881.7 bits (2277), Expect = 2.8e-252
Identity = 461/492 (93.70%), Postives = 469/492 (95.33%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF  K+ K         + SGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQ LLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQKLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRR+QEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRVQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

[Close]

BLAST of Sed0027732 vs. NCBI nr
Match: XP_038876730.1 (signal recognition particle 54 kDa protein 2 [Benincasa hispida])

HSP 1 Score: 879.0 bits (2270), Expect = 1.8e-251
Identity = 459/492 (93.29%), Postives = 468/492 (95.12%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSIS ALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISHALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF  K+ K         + SGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIA EGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+GREKESQAKLKRYMTMMDSMTDEELDS+NPKLMNESRMMRIARGSGRR+QEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLMNESRMMRIARGSGRRVQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

[Close]

BLAST of Sed0027732 vs. ExPASy Swiss-Prot
Match: P49972 (Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 1.3e-244
Identity = 438/492 (89.02%), Postives = 460/492 (93.50%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGGSISRALQQMSNAT+IDEKVLNECLNEITRALLQ+DVQFKLVRDM TNIKKIV
Sbjct: 1   MVLAELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NLDDLAAGHNKR+IIQQAVFNELCK+LDPGKPSF  K+ K         + SGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIA +GVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMY+QFQN+LKMGPI QVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+GRE ESQAK+KRYMTMMDSMT+EELDSSNPKLM +SR+MRIARGSGR++ EVM+MME
Sbjct: 361 MPKGRENESQAKIKRYMTMMDSMTNEELDSSNPKLMTDSRIMRIARGSGRQVHEVMDMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAK+WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQ+LMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM 480

[Close]

BLAST of Sed0027732 vs. ExPASy Swiss-Prot
Match: P49971 (Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 815.8 bits (2106), Expect = 2.5e-235
Identity = 424/493 (86.00%), Postives = 456/493 (92.49%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNAT+IDEKVLNECLNEITRALLQ+DVQFKLVRDM TNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMSTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NL+DLAAGHNKR+IIQQAV+NELCK+LDPGKP+F  K+ K         + SGKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIQQAVYNELCKILDPGKPAFTLKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGRS------CKIAEEGVERF 180
           YAYHHQK+GWKPALVCADTFRAGAFDQLKQNATKAKIPFYG S       KIA +GVE F
Sbjct: 121 YAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKIAVDGVETF 180

Query: 181 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQS 240
           KKENCDLIIVDTSGRHKQEAALFEEMRQVSEA KPDLVIFVMDSSIGQAAFDQAQAF+QS
Sbjct: 181 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQS 240

Query: 241 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
           VAVGAVIVTKMDGHAKGGGALS VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 241 VAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300

Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAE 360
            SG ++KI +VVPMDQQPELLQKLSEGHFTLRIMY+QFQ++LKMGP+  VFSMLPGF AE
Sbjct: 301 LSGLVNKIQDVVPMDQQPELLQKLSEGHFTLRIMYEQFQSMLKMGPLG-VFSMLPGFSAE 360

Query: 361 LMPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMM 420
           +MPQGREKESQAK KRYMTMMDSMTDEELDS+NPK++ ESR+MRIARGSGR + EVMEM+
Sbjct: 361 MMPQGREKESQAKFKRYMTMMDSMTDEELDSTNPKILTESRIMRIARGSGRLVHEVMEML 420

Query: 421 EEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQ 480
           EEYKRLAK++SKMKGLKIPKKG+MS+LSRNMNAQ+MSKVLPPQMLKQIGGMGGLQ+LMKQ
Sbjct: 421 EEYKRLAKIFSKMKGLKIPKKGDMSSLSRNMNAQNMSKVLPPQMLKQIGGMGGLQNLMKQ 480

[Close]

BLAST of Sed0027732 vs. ExPASy Swiss-Prot
Match: P49967 (Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana OX=3702 GN=SRP-54C PE=2 SV=2)

HSP 1 Score: 811.6 bits (2095), Expect = 4.7e-234
Identity = 412/492 (83.74%), Postives = 454/492 (92.28%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQMSN T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F  K+ K         + +GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIA EGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGF+DK+ EVVP DQQPELL+KLS+G+FTLRIMYDQFQN+L MGP+ +VFSMLPG  AE+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+G EKESQAK+KRYMTMMDSMT++ELDSSNPK+ NESRMMRIARGSGR+++EVMEM+E
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLE 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAK+WSKMKGLKIPK G+MSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480

[Close]

BLAST of Sed0027732 vs. ExPASy Swiss-Prot
Match: P49968 (Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare OX=4513 GN=SRP54-1 PE=2 SV=1)

HSP 1 Score: 751.5 bits (1939), Expect = 5.8e-216
Identity = 390/492 (79.27%), Postives = 438/492 (89.02%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRAL QMSNATVIDEKVL ECLNEI+RALLQSDVQFK+VRDMQTNI+KIV
Sbjct: 1   MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NL+ LAAG NKR+IIQQAVF ELC MLDPGKP+F TK+ K         + SGKTTTCTK
Sbjct: 61  NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTTKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYG        KIA EG+ERF+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KEN DLII+DTSGRHKQEAALFEEMRQV+EATKPDLVIFVMD SIGQAAFDQAQAFKQS 
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           +VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD 
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SG MDKI +V+P DQQPELL KL+EG FTLR++Y+QFQNLLKMGPI QVFSMLPGF +EL
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+G EKE QAK+KRYMT+MDSMT  ELDS+NPKLM ESR++RIARGSGR+I++V +M+E
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSGRQIRDVTDMLE 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LPPQ+LKQ+GGMGGLQ+LMKQM
Sbjct: 421 EYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGMGGLQALMKQM 480

[Close]

BLAST of Sed0027732 vs. ExPASy Swiss-Prot
Match: P49969 (Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare OX=4513 GN=SRP54-2 PE=2 SV=1)

HSP 1 Score: 749.2 bits (1933), Expect = 2.9e-215
Identity = 389/492 (79.07%), Postives = 437/492 (88.82%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRAL QMSNATVIDEKVL ECLNEI+RALLQSDVQFK+VRDMQTNI+KIV
Sbjct: 1   MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NL+ LAAG NKR+IIQQAVF ELC MLDPGKP+F  K+ K         + SGKTTTCTK
Sbjct: 61  NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTPKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYG        KIA EG+ERF+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KEN DLII+DTSGRHKQEAALFEEMRQV+EATKPDLVIFVMD SIGQAAFDQAQAFKQS 
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           +VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD 
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SG MDKI +V+P DQQPELL KL+EG FTLR++Y+QFQNLLKMGPI QVFSMLPGF +EL
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+G EKE QAK+KRYMT+MDSMT  ELDS+NPKLM ESR++RIARGSGR+I++V +M+E
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSGRQIRDVTDMLE 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LPPQ+LKQ+GGMGGLQ+LMKQM
Sbjct: 421 EYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGMGGLQALMKQM 480

[Close]

BLAST of Sed0027732 vs. ExPASy TrEMBL
Match: A0A6J1KE35 (Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111493016 PE=3 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 1.2e-253
Identity = 463/492 (94.11%), Postives = 470/492 (95.53%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF  K+ K         + SGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

[Close]

BLAST of Sed0027732 vs. ExPASy TrEMBL
Match: A0A6J1G940 (Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111452092 PE=3 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 8.1e-253
Identity = 461/492 (93.70%), Postives = 469/492 (95.33%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF  K+ K         + SGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMR+ARGSGRRIQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRVARGSGRRIQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

[Close]

BLAST of Sed0027732 vs. ExPASy TrEMBL
Match: A0A6J1GTY4 (Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111457512 PE=3 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 1.4e-252
Identity = 461/492 (93.70%), Postives = 469/492 (95.33%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF  K+ K         + SGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQ LLKMGPISQVFSMLPGF AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQKLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRR+QEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRVQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

[Close]

BLAST of Sed0027732 vs. ExPASy TrEMBL
Match: A0A6J1IYF3 (Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111479604 PE=3 SV=1)

HSP 1 Score: 875.2 bits (2260), Expect = 1.3e-250
Identity = 458/492 (93.09%), Postives = 467/492 (94.92%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF  K+ K         + SGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQNLLK+GPISQVFSMLP F AEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKIGPISQVFSMLPRFSAEL 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRR+QEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRVQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMK M
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKHM 480

[Close]

BLAST of Sed0027732 vs. ExPASy TrEMBL
Match: A0A6J1DKQ8 (Signal recognition particle 54 kDa protein OS=Momordica charantia OX=3673 GN=LOC111020969 PE=3 SV=1)

HSP 1 Score: 874.8 bits (2259), Expect = 1.7e-250
Identity = 460/493 (93.31%), Postives = 470/493 (95.33%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSF  K+ K         + SGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YA++HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIA EGVERFK
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGF-GAE 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQ+LLKMGPISQVFSMLPGF GAE
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQSLLKMGPISQVFSMLPGFGGAE 360

Query: 361 LMPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMM 420
           LMP+GREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMM
Sbjct: 361 LMPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMM 420

Query: 421 EEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQ 480
           EEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQ
Sbjct: 421 EEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQ 480

[Close]

BLAST of Sed0027732 vs. TAIR 10
Match: AT1G48900.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 811.6 bits (2095), Expect = 3.4e-235
Identity = 412/492 (83.74%), Postives = 454/492 (92.28%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQMSN T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F  K+ K         + +GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIA EGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGF+DK+ EVVP DQQPELL+KLS+G+FTLRIMYDQFQN+L MGP+ +VFSMLPG  AE+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+G EKESQAK+KRYMTMMDSMT++ELDSSNPK+ NESRMMRIARGSGR+++EVMEM+E
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLE 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKRLAK+WSKMKGLKIPK G+MSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480

[Close]

BLAST of Sed0027732 vs. TAIR 10
Match: AT5G49500.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 711.8 bits (1836), Expect = 3.6e-205
Identity = 369/494 (74.70%), Postives = 421/494 (85.22%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I  A+Q+M+N T+IDEK LN+CLNEITRALLQSDV F LV++MQTNIKKIV
Sbjct: 1   MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERK----------NKWSGKTTTC 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGK +F  K+ K           +   K    
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLV 120

Query: 121 TKYAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVER 180
                  ++KG+KPALVCADTFRAGAFDQLKQNATK+KIP+YG        KIA EGV+R
Sbjct: 121 PSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDR 180

Query: 181 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQ 240
           FKKENCDLIIVDTSGRHKQ+A+LFEEMRQ+SEATKPDLVIFVMDSSIGQ AF+QA+AFKQ
Sbjct: 181 FKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQ 240

Query: 241 SVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 300
           +VAVGAVI+TKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KPFVSRLLG G
Sbjct: 241 TVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNG 300

Query: 301 DWSGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGA 360
           D SGF++K+ EVVP DQQPELL+ LS G FTLRIMYDQFQN+L MGP+ +VFSMLPG  A
Sbjct: 301 DMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGMRA 360

Query: 361 ELMPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEM 420
           E+MP+G EKESQAK+KRYMTMMDSMT+EELDSSNPK+ NESR+MRIARGSGR ++EVMEM
Sbjct: 361 EMMPEGHEKESQAKIKRYMTMMDSMTNEELDSSNPKVFNESRIMRIARGSGRIVREVMEM 420

Query: 421 MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMK 480
           +EEYKRL  +W K+KGLK  +KG MSALS+N N+Q +SKVLP QMLKQIGGM GLQSLMK
Sbjct: 421 LEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQMLKQIGGMSGLQSLMK 480

[Close]

BLAST of Sed0027732 vs. TAIR 10
Match: AT1G15310.1 (signal recognition particle 54 kDa subunit )

HSP 1 Score: 698.4 bits (1801), Expect = 4.1e-201
Identity = 367/492 (74.59%), Postives = 420/492 (85.37%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQM+N T+IDEKVLN+ LNEITRALLQSDV F LV  MQTNIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NLDDLAAGHNKR II+QA+F ELC+MLDPGKP+F  K+ K         + +GKTTTCTK
Sbjct: 61  NLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKG+K ALVCADTFRAGAFDQLKQNATKAKIPFYG        KIA EGV+RFK
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE CDLIIVDTSGRHKQ A+LFEEMRQV+EAT+PDLVIFVMDSSIGQAAF+QA+AFK++V
Sbjct: 181 KEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           +VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SG +DK+ EVVP D Q EL++ LS+G+FTLR MYDQFQ  L++ P++Q+FSMLPG  AE+
Sbjct: 301 SGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQLFSMLPGISAEM 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420
           MP+G  +ES+ K+KRYMTMMDSMT++ELDS NPK+ NESR+MRIARGSGR ++EVMEM+E
Sbjct: 361 MPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLE 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480
           EYKR+AK    MKG+KIPK G+            MSKV+PPQMLKQ+GGM GLQSLMKQM
Sbjct: 421 EYKRIAKT---MKGIKIPKNGD------------MSKVIPPQMLKQMGGMSGLQSLMKQM 476

[Close]

BLAST of Sed0027732 vs. TAIR 10
Match: AT1G48900.2 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 676.8 bits (1745), Expect = 1.3e-194
Identity = 342/418 (81.82%), Postives = 382/418 (91.39%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQMSN T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN--------KWSGKTTTCTK 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F  K+ K         + +GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGR-----SCKIAEEGVERFK 180
           YAY+HQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYG        KIA EGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 360
           SGF+DK+ EVVP DQQPELL+KLS+G+FTLRIMYDQFQN+L MGP+ +VFSMLPG  AE+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 361 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEM 406
           MP+G EKESQAK+KRYMTMMDSMT++ELDSSNPK+ NESRMMRIARGSGR+++EVME+
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEI 418

[Close]

BLAST of Sed0027732 vs. TAIR 10
Match: AT5G03940.1 (chloroplast signal recognition particle 54 kDa subunit )

HSP 1 Score: 178.3 bits (451), Expect = 1.4e-44
Identity = 133/464 (28.66%), Postives = 228/464 (49.14%), Query Frame = 0


Query: 2   VLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVN 61
           +  QL G +  A  ++    V+ +  + E + +I RALL++DV   +VR    ++     
Sbjct: 77  MFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAV 136

Query: 62  LDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFYTKERKN---------KWSGKTTTCTK 121
              +  G    + + + V +EL K++  G+ S     +           +  GKTT C K
Sbjct: 137 GMGVIRGVKPDQQLVKIVHDELVKLMG-GEVSELQFAKSGPTVILLAGLQGVGKTTVCAK 196

Query: 122 YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG-----RSCKIAEEGVERFK 181
            A + +K+G    L+  D +R  A DQL     +  +P Y      +   IA++G++  K
Sbjct: 197 LACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAK 256

Query: 182 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
           K N D++I+DT+GR + +  + +E++ V +   P  V+ V+D+  GQ A      F   +
Sbjct: 257 KNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEI 316

Query: 242 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
            +   I+TK+DG ++GG ALS    +  P+  +G GE M++ E F       R+LGMGD 
Sbjct: 317 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 376

Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYDQFQNLLKMGPISQVFSMLPGFGAEL 361
             F++K  EV+  +   +L +K+    F       Q + + KMG +++V  M+PG G   
Sbjct: 377 LSFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVS 436

Query: 362 MPQGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNES--RMMRIARGSGRRIQEVMEM 421
             Q RE E    +     M++ MT EE +   P+L+ ES  R  RIA+ SG+  Q+V  +
Sbjct: 437 PAQIREAEKNLLVME--AMIEVMTPEERE--RPELLAESPERRKRIAKDSGKTEQQVSAL 496

Query: 422 MEEYKRLAKVWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPP 449
           + +   + ++  KMK L  + + G + ALS   +A    +  PP
Sbjct: 497 VAQ---IFQMRVKMKNLMGVMEGGSIPALSGLEDALKAEQKAPP 532

The following BLAST results are available for this feature:

BLAST of Sed0027732 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998349.1	2.6e-253	94.11	signal recognition particle 54 kDa protein 2 [Cucurbita maxima]	[more]
XP_023523909.1	3.4e-253	93.90	signal recognition particle 54 kDa protein 2 isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_022948401.1	1.7e-252	93.70	signal recognition particle 54 kDa protein 2-like [Cucurbita moschata]	[more]
XP_022955506.1	2.8e-252	93.70	signal recognition particle 54 kDa protein 2 [Cucurbita moschata]	[more]
XP_038876730.1	1.8e-251	93.29	signal recognition particle 54 kDa protein 2 [Benincasa hispida]	[more]

BLAST of Sed0027732 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49972	1.3e-244	89.02	Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum OX=4081 PE=...	[more]
P49971	2.5e-235	86.00	Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum OX=4081 PE=...	[more]
P49967	4.7e-234	83.74	Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
P49968	5.8e-216	79.27	Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare OX=4513 GN=SRP54...	[more]
P49969	2.9e-215	79.07	Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare OX=4513 GN=SRP54...	[more]

BLAST of Sed0027732 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KE35	1.2e-253	94.11	Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1G940	8.1e-253	93.70	Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1GTY4	1.4e-252	93.70	Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1IYF3	1.3e-250	93.09	Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1DKQ8	1.7e-250	93.31	Signal recognition particle 54 kDa protein OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Sed0027732 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48900.1	3.4e-235	83.74	Signal recognition particle, SRP54 subunit protein	[more]
AT5G49500.1	3.6e-205	74.70	Signal recognition particle, SRP54 subunit protein	[more]
AT1G15310.1	4.1e-201	74.59	signal recognition particle 54 kDa subunit	[more]
AT1G48900.2	1.3e-194	81.82	Signal recognition particle, SRP54 subunit protein	[more]
AT5G03940.1	1.4e-44	28.66	chloroplast signal recognition particle 54 kDa subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013822	Signal recognition particle SRP54, helical bundle	SMART	SM00963	SRP54_N_2	coord: 2..87 e-value: 3.5E-13 score: 59.8
IPR013822	Signal recognition particle SRP54, helical bundle	PFAM	PF02881	SRP54_N	coord: 6..83 e-value: 2.3E-15 score: 56.5
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	SMART	SM00962	SRP54_3	coord: 104..283 e-value: 1.5E-75 score: 267.0
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PFAM	PF00448	SRP54	coord: 104..283 e-value: 1.2E-66 score: 224.1
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PROSITE	PS00300	SRP54	coord: 256..269
IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	GENE3D	1.10.260.30		coord: 299..423 e-value: 1.7E-43 score: 149.7
IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	SUPERFAMILY	47446	Signal peptide-binding domain	coord: 285..420
IPR004125	Signal recognition particle, SRP54 subunit, M-domain	PFAM	PF02978	SRP_SPB	coord: 315..415 e-value: 1.8E-28 score: 99.1
IPR006325	Signal recognition particle, SRP54 subunit, eukaryotic	TIGRFAM	TIGR01425	TIGR01425	coord: 2..414 e-value: 2.3E-201 score: 667.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 91..272 e-value: 1.5E-110 score: 370.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 104..285
IPR042101	Signal recognition particle SRP54, N-terminal domain superfamily	GENE3D	1.20.120.140		coord: 5..293 e-value: 1.5E-110 score: 370.8
None	No IPR available	PANTHER	PTHR11564:SF33	SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN	coord: 1..479
None	No IPR available	CDD	cd17875	SRP54_G	coord: 104..281 e-value: 1.18308E-124 score: 359.199
IPR022941	Signal recognition particle, SRP54 subunit	PANTHER	PTHR11564	SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54	coord: 1..479
IPR022941	Signal recognition particle, SRP54 subunit	HAMAP	MF_00306	SRP54	coord: 6..464 score: 32.454868
IPR036225	SRP/SRP receptor, N-terminal	SUPERFAMILY	47364	Domain of the SRP/SRP receptor G-proteins	coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027732.1	Sed0027732.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
cellular_component	GO:0048500	signal recognition particle
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0030942	endoplasmic reticulum signal peptide binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding