Homology
BLAST of Sed0027635 vs. NCBI nr
Match:
XP_022135773.1 (SWI/SNF complex subunit SWI3D [Momordica charantia])
HSP 1 Score: 1491.5 bits (3860), Expect = 0.0e+00
Identity = 830/1036 (80.12%), Postives = 896/1036 (86.49%), Query Frame = 0
Query: 1 MEEKRRDAGNLPANSTASPSSEPPTSRRRGGAQKRKASALGGSNSSSAPSKRVTRDKSAL 60
MEEKRRDA NLP NST SPS EPP+SRRR GAQKRKASALG SN+SSAPSKRVTRDKSAL
Sbjct: 1 MEEKRRDAANLPVNSTDSPSXEPPSSRRRAGAQKRKASALGVSNTSSAPSKRVTRDKSAL 60
Query: 61 SHPPNHSGPFTRARLGPNNGAGTASAN-------AAPGSVKAQG----SEAQRGEALAAA 120
SHP NHSGPFTRARLGPNN AGTAS N AA GSVK +G SE QRGEA+ AA
Sbjct: 61 SHPQNHSGPFTRARLGPNNVAGTASGNAAGGLAAAAAGSVKLEGSVLHSEVQRGEAIVAA 120
Query: 121 AEELNRASRLANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSG 180
AEELN+ SRLANL+ASFEADFEA+KSR +VH VPNHCGWFSWT+VHPIEER++SSFFSG
Sbjct: 121 AEELNKVSRLANLEASFEADFEAIKSRGADVHAVPNHCGWFSWTKVHPIEERTMSSFFSG 180
Query: 181 KSSTRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINF 240
KS TRSP +YI+IRNWIMKKFH NPS+QI SKDLSELEVGEL+ARQEV+EFLDHWGLINF
Sbjct: 181 KSGTRSPDMYIDIRNWIMKKFHANPSMQIESKDLSELEVGELEARQEVMEFLDHWGLINF 240
Query: 241 HPFLPAKSTSTSDVEDENQKESLVEKLFHFETLESRPSVAPKTNV-TTAPPRLLRESAIS 300
HPF+P STSTSDV+DEN KESLVEKLF FETLES PS+ PKTNV TTAPPRLLRESAI
Sbjct: 241 HPFIPTDSTSTSDVDDENLKESLVEKLFQFETLESCPSIVPKTNVTTTAPPRLLRESAIP 300
Query: 301 EEMVKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILME 360
EEMV+PEGPSVEYHCNSCSADCSRKRYHCQKQADFDLC ECF +GKFDS+MSS DFILME
Sbjct: 301 EEMVRPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCXECFNNGKFDSDMSSSDFILME 360
Query: 361 SAEVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFL 420
AEVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATK+KAQCILHFIQMPIEDTFL
Sbjct: 361 PAEVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFL 420
Query: 421 ESENNVEVSAKETAVPPSIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQ 480
ESE+NVEVS KETAVPPS ENDSSVP DITE MDNK TG EA VE A+K+DTG V+V Q
Sbjct: 421 ESEDNVEVSPKETAVPPSSENDSSVPADITEPMDNKPTGKEALNVENANKDDTGEVKVGQ 480
Query: 481 NNSKAE-VEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGN 540
NSK+E V +AALD K +D GQKVSEDIALNAL+EAFEAIGY TP++ LSFADVGN
Sbjct: 481 ENSKSEDVGDKAALDKSKSDDGGQKVSEDIALNALREAFEAIGYVXTPERR-LSFADVGN 540
Query: 541 PVMALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRHCFILEDPPGDKNAEANSE 600
PV+ALAAFLARLVGSDVA ASAHFSLKS+SQKS SL+LATRHCFILEDPP DKNA++NSE
Sbjct: 541 PVVALAAFLARLVGSDVASASAHFSLKSISQKSPSLELATRHCFILEDPPDDKNAQSNSE 600
Query: 601 SVVNVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNGDSVTKETTMDNGNSSDAI 660
SVVNVEAQKND+EQC KQRQ +STSV +D+ LST N KNG+SVTKETT+DNGNSSDAI
Sbjct: 601 SVVNVEAQKNDNEQCEKQRQDDSTSVLDDRALSTNKSNNKNGESVTKETTVDNGNSSDAI 660
Query: 661 GEHDSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIESKLTTNPVEKLGEETSVEK 720
EHD ++ HG DGTSNL ELREPEL KDERT IV E EN+ES LTTNPVEKLGE T VEK
Sbjct: 661 REHDPVIIHGSDGTSNLNELREPELLKDERTGIVKESENLESNLTTNPVEKLGEGTHVEK 720
Query: 721 PS-------DVHV----HAEKTEIYNQVPSHSDKTSKELDDVPNPLPSVNDPQPMVAADS 780
PS DVH+ HAE+T+ QVPSHS KTSK+LDDVPNPLPSVN+PQP++AA+S
Sbjct: 721 PSQPILSSEDVHMSDLEHAERTD-QKQVPSHSAKTSKDLDDVPNPLPSVNEPQPLIAANS 780
Query: 781 VIEASNDVALVPVSREKNEPEQTETSKSVVDQGASKVSDSLLSEENATPQPVKPNSAV-G 840
V EASND A+V S +K E QTETS SVVDQGAS VSDSLLS +NA PQPV PNS +
Sbjct: 781 VKEASNDGAVVLDSHKKYETSQTETSNSVVDQGASTVSDSLLSADNAMPQPVNPNSVIES 840
Query: 841 GSDDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLSMI 900
G+ DNQSKDNKEE S TSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQL+MI
Sbjct: 841 GAGDNQSKDNKEEKSSCTSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLAMI 900
Query: 901 LIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASASRGGA 960
LIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPA++SR A
Sbjct: 901 LIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPATSSRVMA 960
Query: 961 PTLPGNRMAMNLANSNPRPPMGMTPQRPPTSGPPGIAATNPN----PQYATTTSATISGS 1008
P+LP NRMAMN ANS PRPPMGMT QRPPTSGP G+AATNPN PQYA TTS TISGS
Sbjct: 961 PSLPANRMAMNFANSVPRPPMGMTSQRPPTSGPVGMAATNPNLQPQPQYA-TTSTTISGS 1020
BLAST of Sed0027635 vs. NCBI nr
Match:
XP_038887838.1 (SWI/SNF complex subunit SWI3D [Benincasa hispida])
HSP 1 Score: 1478.4 bits (3826), Expect = 0.0e+00
Identity = 817/1029 (79.40%), Postives = 897/1029 (87.17%), Query Frame = 0
Query: 1 MEEKRRDAGNLPANSTASPSSEPPTSRRRGGAQKRKASALGGSNSSSAPSKRVTRDKSAL 60
MEEKRRD+GNLPAN+T SPSSEPP+SRRR GA KRKASAL GSNSSS PSKRVTRDKSAL
Sbjct: 1 MEEKRRDSGNLPANTTDSPSSEPPSSRRRAGAHKRKASALSGSNSSSGPSKRVTRDKSAL 60
Query: 61 SHPPNHSGPFTRARLGPNNGAGTASANA----APGSVKAQG----SEAQRGEALAAAAEE 120
SHPPNHSGPFTRARLGPNNGAG ASANA A GSVKA+G SE QRG+AL AAAEE
Sbjct: 61 SHPPNHSGPFTRARLGPNNGAGAASANAAGGFAAGSVKAEGSLFHSEVQRGDALVAAAEE 120
Query: 121 LNRASRLANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSS 180
LN+ASRLANL+ASFE DFE +KSR NVHVVPNHCGWFSWT+VHPIEE ++ +FFSGK+
Sbjct: 121 LNKASRLANLEASFETDFEVIKSRGANVHVVPNHCGWFSWTKVHPIEESTMPTFFSGKAG 180
Query: 181 TRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHPF 240
TRSP +YIEIRNWIMKKFH NPS QI SK LSELE+GELDARQEV+EFLDHWGLINFHPF
Sbjct: 181 TRSPNIYIEIRNWIMKKFHANPSTQIESKALSELEIGELDARQEVMEFLDHWGLINFHPF 240
Query: 241 LPAKSTSTSDVEDENQKESLVEKLFHFETLESRPSVAPKTNVTT-APPRLLRESAISEEM 300
L A S ST+D ++ENQK+SLVEKLFHFETLES PS+ PK N TT APPRLLRESAISEEM
Sbjct: 241 LAADSISTNDADNENQKDSLVEKLFHFETLESCPSIVPKINATTAAPPRLLRESAISEEM 300
Query: 301 VKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMESAE 360
V+PEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECF +GKFDS+MSS DFILMESAE
Sbjct: 301 VRPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFNNGKFDSDMSSSDFILMESAE 360
Query: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLESE 420
VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATK+KAQCILHFIQMPIEDTFLE E
Sbjct: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFLEYE 420
Query: 421 NNVEVSAKETAVPPSIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQNNS 480
NVEVSAKET VPP IENDSSVP DITESMDNK TG EAS VE+ASKEDTG V+V Q+NS
Sbjct: 421 GNVEVSAKETIVPPLIENDSSVPSDITESMDNKATGKEASNVESASKEDTGEVKVGQDNS 480
Query: 481 KAE-VEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGNPVM 540
K+E VE +A+LDN K ED QKVSEDIALNAL+EAFEAIGY LTP +H+LSFADVGNPVM
Sbjct: 481 KSEDVEGKASLDNSKSEDGDQKVSEDIALNALREAFEAIGYILTP-EHSLSFADVGNPVM 540
Query: 541 ALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRHCFILEDPPGDKNAEANSESVV 600
ALAAFLARLVG DVA ASA FSLKS+SQKS SL+LATRHCFILEDPP DK A+ NSES+
Sbjct: 541 ALAAFLARLVGPDVASASARFSLKSISQKSPSLELATRHCFILEDPPDDKKAQVNSESID 600
Query: 601 NVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNGDSVTKETTMDNGNSSDAIGEH 660
+VEAQKND EQCAKQR+ NSTS+ +D+ LST N N K+G+SV KETT +NGNSSDAIGEH
Sbjct: 601 DVEAQKNDKEQCAKQREDNSTSLLDDRALSTNNSNNKSGESVIKETT-ENGNSSDAIGEH 660
Query: 661 DSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIESKLTTNPVEKLGEETSVEKPS- 720
+ ++NHG D TSNLK+L EPEL KDE+T IV E +N+ESKL++NPVEK+GE T VEKPS
Sbjct: 661 NPVINHGSD-TSNLKKLGEPELPKDEKTGIVKESKNLESKLSSNPVEKVGEGTPVEKPSQ 720
Query: 721 ------DVHV----HAEKTEIYNQVPSHSDKTSKELDDVPNPLPSVNDPQPMVAADSVIE 780
DVH+ HAE +EI QVPS S KT+KELDD N LPS N+PQ +++A+SV E
Sbjct: 721 STLSPKDVHMSDSQHAESSEIQKQVPSRSAKTTKELDDETNRLPSGNEPQVIISANSVKE 780
Query: 781 ASNDVALVPVSREKNEPEQTETSKSVVDQGASKVSDSLLSEENATPQPVKPNSAV-GGSD 840
AS +VA++ S +KNEP QTETSKSVVD GA+KVSDSL S ATPQPV+PNS V G+D
Sbjct: 781 ASYNVAMLSDSHDKNEPGQTETSKSVVDHGATKVSDSLSSAVIATPQPVEPNSVVERGAD 840
Query: 841 DNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLSMILIE 900
DNQSKDNKEE+S TSKKE+K+DKLKRAAVTTLSAAAVKAK+LANQEEDQIRQL+MILIE
Sbjct: 841 DNQSKDNKEENSNSTSKKEEKVDKLKRAAVTTLSAAAVKAKILANQEEDQIRQLAMILIE 900
Query: 901 KQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASASRGGAPTL 960
KQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPAS+SRG APTL
Sbjct: 901 KQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASSSRGVAPTL 960
Query: 961 PGNRMAMNLANSNPRPPMGMTPQRPPTSGPPGIAATNPNPQYATTTSATISGSSFEPANQ 1008
P NRMAMN ANS PRPPMGM PQRPPTSGP G+AATNPNPQYA TTS TISG+SF PANQ
Sbjct: 961 PANRMAMNFANSAPRPPMGMMPQRPPTSGPSGMAATNPNPQYA-TTSTTISGNSFRPANQ 1020
BLAST of Sed0027635 vs. NCBI nr
Match:
KAG6572029.1 (SWI/SNF complex subunit SWI3D, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1457.6 bits (3772), Expect = 0.0e+00
Identity = 810/1029 (78.72%), Postives = 885/1029 (86.01%), Query Frame = 0
Query: 1 MEEKRRDAGNLPANSTASPSSEPPTSRRRGGAQKRKASALGGSNSSSAPSKRVTRDKSAL 60
ME+KRRDAGNLPANST SPSSEPP+SRRR GAQKRKAS LGGS SSSAPSKRVTR+KSAL
Sbjct: 1 MEDKRRDAGNLPANSTDSPSSEPPSSRRRAGAQKRKASTLGGSISSSAPSKRVTREKSAL 60
Query: 61 SHPPNHSGPFTRARLGPNNGAGTASAN----AAPGSVKAQG----SEAQRGEALAAAAEE 120
SHPPNH+GPFTRAR GPNN AG ASAN +A GSVK +G SE QRG+AL AAAEE
Sbjct: 61 SHPPNHNGPFTRARFGPNNVAGAASANGGLASAAGSVKTEGSLLHSEVQRGDALVAAAEE 120
Query: 121 LNRASRLANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSS 180
LN+A+RLANL+ASFEADFEA+KSR N HVVPNHCGWFSWTEVHPIEERS+ SFFSGK
Sbjct: 121 LNKATRLANLEASFEADFEAIKSRSANSHVVPNHCGWFSWTEVHPIEERSMPSFFSGKDG 180
Query: 181 TRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHPF 240
TRSP +YI+IRNWIMKKFH NPS Q+ +KDLSE+EVGE DAR+EV+EFLDHWGLINFHPF
Sbjct: 181 TRSPDIYIKIRNWIMKKFHANPSTQLEAKDLSEMEVGEQDARKEVMEFLDHWGLINFHPF 240
Query: 241 LPAKSTSTSDVEDENQKESLVEKLFHFETLESRPSVAPKTNVTT-APPRLLRESAISEEM 300
L A+S STSD++DE+QK+SLVEKLFHFETLES PS+ PK NVTT APPRLLRESAISEEM
Sbjct: 241 LSAESISTSDLDDESQKDSLVEKLFHFETLESCPSIVPKINVTTAAPPRLLRESAISEEM 300
Query: 301 VKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMESAE 360
+PEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECF +GKFDS+MSS DFILMES
Sbjct: 301 TRPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFNNGKFDSDMSSSDFILMESVG 360
Query: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLESE 420
VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATK+KAQCILHFIQMPIEDTFLESE
Sbjct: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFLESE 420
Query: 421 NNVEVSAKETAVPPSIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQNNS 480
+NVE AKET VPP ENDSSVP DITESMDNK T EAS ETA+KEDTG V+V +NS
Sbjct: 421 DNVEDGAKET-VPPLTENDSSVPTDITESMDNKATEKEASNTETATKEDTGEVKVGLDNS 480
Query: 481 KAE-VEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGNPVM 540
K+E VE +AALDN K ED QKVSEDIALNAL+EAFEAIGY LTP +H LSFADVGNPVM
Sbjct: 481 KSEDVEGKAALDNSKLEDGDQKVSEDIALNALREAFEAIGYVLTP-EHPLSFADVGNPVM 540
Query: 541 ALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRHCFILEDPPGDKNAEANSESVV 600
ALAAFLARLVGSDVA ASA FSLKS+SQKS SL+LATRHCFILEDPP D+ A+ANSES+V
Sbjct: 541 ALAAFLARLVGSDVASASARFSLKSVSQKSPSLELATRHCFILEDPPDDQKAKANSESIV 600
Query: 601 NVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNGDSVTKETTMDNGNSSDAIGEH 660
NVEAQKND EQCAKQR NSTSV +D LS + N KNG+SVTKE T+DN NSSDAI EH
Sbjct: 601 NVEAQKNDKEQCAKQRPDNSTSVLDDGALSANDGNNKNGESVTKE-TIDNENSSDAIIEH 660
Query: 661 DSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIESKLTTNPVEKLGEETSVEKPS- 720
+ I NH D TSNLKELREPE+ + ERT IV E EN+ESK T+NPVEKLGE TS EKPS
Sbjct: 661 NPITNHDSDRTSNLKELREPEIPEVERTGIVKESENVESKSTSNPVEKLGEGTSAEKPSQ 720
Query: 721 ------DVHV----HAEKTEIYNQVPSHSDKTSKELDDVPNPLPSVNDPQPMVAADSVIE 780
DVH+ HA KTEI QVPSHS KT KELDD PN LPS N+PQP ++A+SV E
Sbjct: 721 PKLSPKDVHMSDLQHAGKTEIQKQVPSHSAKTKKELDDEPNHLPSANEPQPTISANSVKE 780
Query: 781 ASNDVALVPVSREKNEPEQTETSKSVVDQGASKVSDSLLSEENATPQPVKPNSAV-GGSD 840
AS DVA++P S NEP +TETSKSVVDQGASKV+DSL S ENATP PVKP S + G+D
Sbjct: 781 ASKDVAIIPDSHNGNEPAKTETSKSVVDQGASKVADSLPSTENATPLPVKPTSVIERGAD 840
Query: 841 DNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLSMILIE 900
DNQSKDNKEE+S SKKEDKIDKLKRAAVTTLSAAAVKAK+LANQEEDQIRQL+MILIE
Sbjct: 841 DNQSKDNKEENSNCMSKKEDKIDKLKRAAVTTLSAAAVKAKILANQEEDQIRQLAMILIE 900
Query: 901 KQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASASRGGAPTL 960
KQLHKLESKLAFFN+M+NVT+R+REQLDRSKQRLFQERAQIIAARLGLPAS+SRGGAPTL
Sbjct: 901 KQLHKLESKLAFFNDMENVTVRMREQLDRSKQRLFQERAQIIAARLGLPASSSRGGAPTL 960
Query: 961 PGNRMAMNLANSNPRPPMGMTPQRPPTSGPPGIAATNPNPQYATTTSATISGSSFEPANQ 1008
P NRM MN AN+ PRPPMGM PQRPPTSG PG+AA+NPNPQY TT TISGSSF PANQ
Sbjct: 961 PTNRMPMNFANTVPRPPMGMVPQRPPTSGLPGMAASNPNPQY-PTTGTTISGSSFRPANQ 1020
BLAST of Sed0027635 vs. NCBI nr
Match:
XP_022952326.1 (SWI/SNF complex subunit SWI3D-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 1456.0 bits (3768), Expect = 0.0e+00
Identity = 809/1030 (78.54%), Postives = 884/1030 (85.83%), Query Frame = 0
Query: 1 MEEKRRDAGNLPANSTASPSSEPPTSRRRGGAQKRKASALGGSNSSSAPSKRVTRDKSAL 60
ME+KRRDAGNLPANST SPSSEPP+SRRR GAQKRKAS LGGS SSSAPSKRVTR+KSAL
Sbjct: 1 MEDKRRDAGNLPANSTDSPSSEPPSSRRRAGAQKRKASTLGGSISSSAPSKRVTREKSAL 60
Query: 61 SHPPNHSGPFTRARLGPNNGAGTASAN----AAPGSVKAQG----SEAQRGEALAAAAEE 120
SHPPNH+GPFTRAR GPNN AG ASAN +A GSVK +G SE QRG+AL AAAEE
Sbjct: 61 SHPPNHNGPFTRARFGPNNVAGAASANGGLASAAGSVKTEGSLLHSEVQRGDALVAAAEE 120
Query: 121 LNRASRLANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSS 180
LN+A+RLANL+ASFEADFEA+KSR N HVVPNHCGWFSWTEVHPIEERS+ SFFSGK
Sbjct: 121 LNKATRLANLEASFEADFEAIKSRSANSHVVPNHCGWFSWTEVHPIEERSMPSFFSGKDG 180
Query: 181 TRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHPF 240
TRSP +YI+IRNWIMKKFH NPS Q+ +KDLSE+EVGE DAR+EV+EFLDHWGLINFHPF
Sbjct: 181 TRSPDIYIKIRNWIMKKFHANPSTQLEAKDLSEMEVGEQDARKEVMEFLDHWGLINFHPF 240
Query: 241 LPAKSTSTSDVEDENQKESLVEKLFHFETLESRPSVAPKTNVTT-APPRLLRESAISEEM 300
L A+S STSD++DE+QK+SLVEKLFHFETLES PS+ PK NVTT APPRLLRESAISEEM
Sbjct: 241 LSAESISTSDLDDESQKDSLVEKLFHFETLESCPSIVPKINVTTAAPPRLLRESAISEEM 300
Query: 301 VKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMESAE 360
+PEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECF +GKFDS+MSS DFILMES
Sbjct: 301 TRPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFNNGKFDSDMSSSDFILMESVG 360
Query: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLESE 420
VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATK+KAQCILHFIQMPIEDTFLESE
Sbjct: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFLESE 420
Query: 421 NNVEVSAKETAVPPSIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQNNS 480
+NVE AKET VPP ENDSSVP DITESMDNK T EAS ETA+KEDTG V+V +NS
Sbjct: 421 DNVEDGAKET-VPPLTENDSSVPTDITESMDNKATEKEASNTETATKEDTGEVKVGLDNS 480
Query: 481 KAE-VEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGNPVM 540
K+E VE +AALDN K ED QKVSEDIALNAL+EAFEAIGY LTP +H LSFADVGNPVM
Sbjct: 481 KSEDVEGKAALDNSKLEDGDQKVSEDIALNALREAFEAIGYVLTP-EHPLSFADVGNPVM 540
Query: 541 ALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRHCFILEDPPGDKNAEANSESVV 600
ALAAFLARLVGSDVA ASA FSLKS+SQKS SL+LATRHCFILEDPP D+ A+ANSES+V
Sbjct: 541 ALAAFLARLVGSDVASASARFSLKSVSQKSPSLELATRHCFILEDPPDDQKAKANSESIV 600
Query: 601 NVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNGDSVTKETTMDNGNSSDAIGEH 660
NVEAQKND EQCAKQR NSTSV +D LS + N KNG+SVTKE T+DN NSSDAI EH
Sbjct: 601 NVEAQKNDKEQCAKQRPDNSTSVLDDGALSANDGNNKNGESVTKE-TIDNENSSDAIIEH 660
Query: 661 DSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIESKLTTNPVEKLGEETSVEKPS- 720
+ I NH D TSNLKELREPE+ + ERT IV E EN+ESK T+NPVEKLGE TS EKPS
Sbjct: 661 NPITNHDSDRTSNLKELREPEIPEVERTGIVKESENVESKSTSNPVEKLGEGTSAEKPSQ 720
Query: 721 ------DVHV----HAEKTEIYNQVPSHSDKTSKELDDVPNPLPSVNDPQPMVAADSVIE 780
DVH+ HAEKTEI QVPSHS KT KELDD PN LPS N+PQP ++A+SV E
Sbjct: 721 PKLSPKDVHMSDLQHAEKTEIQKQVPSHSAKTKKELDDEPNHLPSANEPQPTISANSVKE 780
Query: 781 ASNDVALVPVSREKNEPEQTETSKSVVDQGASKVSDSLLSEENATPQPVKPNSAV--GGS 840
AS DVA++P S NEP +TETSKSVVDQ ASKV+DSL S ENATP PVKP S + G +
Sbjct: 781 ASKDVAIIPDSHNGNEPAKTETSKSVVDQEASKVADSLPSTENATPLPVKPTSVIERGAA 840
Query: 841 DDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLSMILI 900
DDNQSKDNKEE+S SKKEDKIDK KRAAVTTLSAAAVKAK+LANQEEDQIRQL+MILI
Sbjct: 841 DDNQSKDNKEENSNCMSKKEDKIDKFKRAAVTTLSAAAVKAKILANQEEDQIRQLAMILI 900
Query: 901 EKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASASRGGAPT 960
EKQLHKLESKLAFFN+M+NVT+R+REQLDRSKQRLFQERAQIIAARLGLPAS+SRGGAPT
Sbjct: 901 EKQLHKLESKLAFFNDMENVTVRMREQLDRSKQRLFQERAQIIAARLGLPASSSRGGAPT 960
Query: 961 LPGNRMAMNLANSNPRPPMGMTPQRPPTSGPPGIAATNPNPQYATTTSATISGSSFEPAN 1008
LP NRM MN AN+ PRPPMGM PQRPPTSG PG+AA+NPNPQY TT TISGSSF PAN
Sbjct: 961 LPTNRMPMNFANTVPRPPMGMVPQRPPTSGLPGMAASNPNPQY-PTTGTTISGSSFRPAN 1020
BLAST of Sed0027635 vs. NCBI nr
Match:
XP_022931284.1 (SWI/SNF complex subunit SWI3D-like [Cucurbita moschata])
HSP 1 Score: 1455.7 bits (3767), Expect = 0.0e+00
Identity = 802/990 (81.01%), Postives = 872/990 (88.08%), Query Frame = 0
Query: 1 MEEKRRDAGNLPANSTASPSSEPPTSRRRGGAQKRKASALGGSNSSSAPSKRVTRDKSAL 60
MEEKRRDAGNLPAN+T SPSSEPP+SRRR GAQKRK SALGGSNSSSAPSKRVTRDK AL
Sbjct: 1 MEEKRRDAGNLPANTTDSPSSEPPSSRRRAGAQKRKVSALGGSNSSSAPSKRVTRDKFAL 60
Query: 61 SHPPNHSGPFTRARLGPNNGAGTASANA-----APGSVKAQG----SEAQRGEALAAAAE 120
SHPPNH+GPFTRARLGPNNGAGTAS NA A GSVK +G SEAQRG+ L AAAE
Sbjct: 61 SHPPNHNGPFTRARLGPNNGAGTASGNAAGGLSAAGSVKVEGSFLHSEAQRGDTLVAAAE 120
Query: 121 ELNRASRLANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKS 180
ELN+ASRLANL+ASF ADFE++KSR N HVVPNHCGWFSWT+VHPIEERS+ SFFSGKS
Sbjct: 121 ELNKASRLANLEASFVADFESIKSRGTNAHVVPNHCGWFSWTKVHPIEERSMPSFFSGKS 180
Query: 181 STRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHP 240
TRSP +YIEIRNWIMKKFH NPS QI SKD+SE+E+GELDARQEV+EFLDHWGLINFHP
Sbjct: 181 GTRSPDIYIEIRNWIMKKFHANPSTQIESKDVSEMEIGELDARQEVMEFLDHWGLINFHP 240
Query: 241 FLPAKSTSTSDVEDENQKESLVEKLFHFETLESRPSVAPKTNVTTAPPRLLRESAISEEM 300
FL A STSTSDV+DE+QK+SLVEKLFHFETLES PSV PKTNVT APPRLLRESAISEEM
Sbjct: 241 FLSADSTSTSDVDDEDQKDSLVEKLFHFETLESSPSVVPKTNVTIAPPRLLRESAISEEM 300
Query: 301 VKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMESAE 360
V+PEGPSVEYHCNSCS DCSRKRYHCQKQADFDLCSECF +GKFDS+MSS DFILMESAE
Sbjct: 301 VRPEGPSVEYHCNSCSGDCSRKRYHCQKQADFDLCSECFNNGKFDSDMSSSDFILMESAE 360
Query: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLESE 420
VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATK+KAQCILHFIQMPIED+FLESE
Sbjct: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDSFLESE 420
Query: 421 NNVEVSAKETAVPPSIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQNNS 480
NN EVSAKET VPPSIENDSSVPMDITE MDNKTTG EAS VE ASKEDT V+V Q+NS
Sbjct: 421 NNDEVSAKETVVPPSIENDSSVPMDITELMDNKTTGKEASNVENASKEDTVEVKVGQDNS 480
Query: 481 KA-EVEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGNPVM 540
K+ +VEV+AALDN K ED GQKVSEDIALNAL+EAFEAIGY LT DQH LSF+DVGNPVM
Sbjct: 481 KSKDVEVKAALDNSKTEDGGQKVSEDIALNALREAFEAIGYVLTSDQHPLSFSDVGNPVM 540
Query: 541 ALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRHCFILEDPPGDKNAEANSESVV 600
ALAAFLARLVGSDV ASAHFSLKSMSQKS SLDLATRHCFILEDP DK A+ANSE VV
Sbjct: 541 ALAAFLARLVGSDVVSASAHFSLKSMSQKSPSLDLATRHCFILEDPLDDK-AQANSERVV 600
Query: 601 NVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNGDSVTKETTMDNGNSSDAIGEH 660
NVEAQ+N +EQC KQR+ NSTSV +D LSTTN KNG+SVT+ETTM+N NS+DA EH
Sbjct: 601 NVEAQQNVNEQCEKQRKDNSTSVLDDSALSTTNSIYKNGESVTEETTMENRNSADATKEH 660
Query: 661 DSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIESKLTTNPVEKLGEETSVEKPS- 720
D +VNHG D T+ LKEL EPE+ KD+RTSIV E EN+ESKLTTN V+KLGEETSVEKPS
Sbjct: 661 DPMVNHGSDVTNKLKELTEPEVPKDDRTSIVKETENMESKLTTNTVQKLGEETSVEKPSQ 720
Query: 721 ------DVHV----HAEKTEIYNQVPSHSDKTSKELDDVPNPLPSVNDPQPMVAADSVIE 780
D+H+ +AEKTEI QVPS S TSK +DDVPNPLPSVN+ QP+VAA+SV
Sbjct: 721 STLLSKDIHMSDLRNAEKTEIQKQVPSPSVNTSK-IDDVPNPLPSVNELQPLVAANSVKV 780
Query: 781 ASNDVALVPVSREKNEPEQTETSKSVVDQGASKVSDSLLSEENATPQPVKPNSAVG-GSD 840
AS+DVA+V R+KNEP QTETSKSVVDQGASKVSDSL +EENA PQPVKPN + G+D
Sbjct: 781 ASSDVAMVSDPRDKNEPAQTETSKSVVDQGASKVSDSLPTEENAPPQPVKPNPVIDKGTD 840
Query: 841 DNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLSMILIE 900
DNQSK+N+EE+SK TSKKE+KIDKLKRAAVTTL+AAAVKAKVLANQEEDQIRQL+MILIE
Sbjct: 841 DNQSKNNEEENSKCTSKKEEKIDKLKRAAVTTLAAAAVKAKVLANQEEDQIRQLAMILIE 900
Query: 901 KQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASASRGGAPTL 960
KQLHKLESKLA+FN+MDNV+MR+REQLDRSKQRLFQERAQIIAARLG+PASASRG AP
Sbjct: 901 KQLHKLESKLAYFNDMDNVSMRIREQLDRSKQRLFQERAQIIAARLGVPASASRGVAP-- 960
Query: 961 PGNRMAMNLANSNPRPPMGMTPQRPPTSGP 969
PGNRMAMN NS PRPPMGM PQRPPTSGP
Sbjct: 961 PGNRMAMNFPNSVPRPPMGMAPQRPPTSGP 986
BLAST of Sed0027635 vs. ExPASy Swiss-Prot
Match:
Q8VY05 (SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana OX=3702 GN=SWI3D PE=1 SV=3)
HSP 1 Score: 687.6 bits (1773), Expect = 2.2e-196
Identity = 488/1053 (46.34%), Postives = 632/1053 (60.02%), Query Frame = 0
Query: 1 MEEKRRD-AGNL--PANSTASPSSEP-PTSRRRGGAQKRKASALGGSN-SSSAPSKR-VT 60
MEEKRRD AG L +S SP+SEP P RRRGG KRKA+ALGGSN SSAPSKR +T
Sbjct: 1 MEEKRRDSAGTLAFAGSSGDSPASEPMPAPRRRGGGLKRKANALGGSNFFSSAPSKRMLT 60
Query: 61 RDKSAL-SHPPNHSGPFTRARLGPNNGAGTASANAAPGSVKAQGSEAQRGEALAAAAEEL 120
R+K+ L S P H+GP TRAR P+ A + A G++ ++ + EE
Sbjct: 61 REKAMLASFSPVHNGPLTRARQAPSIMPSAADGVKSEVLNVAVGADGEKPK----EEEER 120
Query: 121 NRASR-LANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSS 180
N+A R L+A EADFEA++SRD NVHVVPNHCGWFSW ++HP+EERS+ SFF+GK
Sbjct: 121 NKAIREWEALEAKIEADFEAIRSRDSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLE 180
Query: 181 TRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHPF 240
R+ VY EIRNWIM KFH+NP++QI KDL+ELEVG+ +A+QEV+EFLD+WGLINFHPF
Sbjct: 181 GRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPF 240
Query: 241 LPAKSTST-SDVEDENQKESLVEKLFHFETLESRPSVA--PKTNVTTAPPRLLRESAISE 300
P + ST SD +D KESL+ L+ F+ E+ P + P+ P L + ++
Sbjct: 241 PPTDTGSTASDHDDLGDKESLLNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAAD 300
Query: 301 EMVKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMES 360
E++K EGP+VEYHCNSCSADCSRKRYHC KQADFDLC+ECF SGKF S+MSS DFILME
Sbjct: 301 ELLKQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEP 360
Query: 361 AEVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLE 420
AE PG GKWTDQETLLLLEALE++KENWNEIAEHVATK+KAQC+LHF+QMPIED FL+
Sbjct: 361 AEAPGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLD 420
Query: 421 SENNVEVSAKETAVPPSIENDSSVPMDITESMDNK---------------TTGNEASKVE 480
+ + +K+T ++D+SV D E +NK GNE +
Sbjct: 421 QIDYKDPISKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQ 480
Query: 481 TASK-----EDTGVVQVEQNNSKAEVEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAI 540
+SK E+T ++ EQ K E +E + K E D E+IAL AL EAFE +
Sbjct: 481 ESSKPGDASEETNEMEAEQKTPKLETAIE---ERCKDEAD-----ENIALKALTEAFEDV 540
Query: 541 GYGLTPDQHALSFADVGNPVMALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRH 600
G+ TP+ + SFAD+GNPVM LAAFL RL GSDVA ASA S+KS+ S L LATRH
Sbjct: 541 GHSSTPEA-SFSFADLGNPVMGLAAFLVRLAGSDVATASARASIKSLHSNSGML-LATRH 600
Query: 601 CFILEDPPGDKNAEANSESVVNVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNG 660
C+ILEDPP +K S+S + +A+ ND + + E+ +L++ + + +
Sbjct: 601 CYILEDPPDNKKDPTKSKS-CSADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDT 660
Query: 661 DSVTKETTMDNGNSSDAIGEHDSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIES 720
D+ KET D++ E + + T+ L ++E +K T
Sbjct: 661 DT-GKET-------QDSVSEEKQPGSRTENSTTKLDAVQEKRSSKPVTTD---------- 720
Query: 721 KLTTNPVEKLGEETSVEKPSDVHVHAEKTEIYNQVPSHSDKTSKELDDV---PNPLPSVN 780
+ EKP D+ PS + KEL + N L S N
Sbjct: 721 --------------NSEKPVDI-----------ICPSQDKCSGKELQEPLKDGNKLSSEN 780
Query: 781 -----DPQPMVAAD-SVIEASNDVALVPVSREKNEPEQT-----ETSKSVVDQGASKVSD 840
AAD S EAS DV + + + +PE E + ++GA+ V
Sbjct: 781 KDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTVGEKVQLAKEEGANDVLS 840
Query: 841 SLLSEENATPQPV----KPNSAVGGSDDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTL 900
+ +++ + QP+ P + G + N +++ +GT K + I+KLKRAA++ +
Sbjct: 841 T--PDKSVSQQPIGSASAPENGTAGGNPNIEGKKEKDICEGTKDKYN-IEKLKRAAISAI 900
Query: 901 SAAAVKAKVLANQEEDQIRQLSMILIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQR 960
SAAAVKAK LA QEEDQIRQLS LIEKQLHKLE+KL+ FNE +++TMRVREQL+RS+QR
Sbjct: 901 SAAAVKAKNLAKQEEDQIRQLSGSLIEKQLHKLEAKLSIFNEAESLTMRVREQLERSRQR 960
Query: 961 LFQERAQIIAARLGLPASASRGGAPTLPGNRMAMNLANSNPRPPMGMTPQRPPTSGPPGI 1005
L+ ERAQIIAARLG+P S S +LP NR+A N AN RPPMGM RPP PPG
Sbjct: 961 LYHERAQIIAARLGVPPSMS--SKASLPTNRIAANFANVAQRPPMGMAFPRPPMPRPPGF 985
BLAST of Sed0027635 vs. ExPASy Swiss-Prot
Match:
Q9XI07 (SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana OX=3702 GN=SWI3C PE=1 SV=1)
HSP 1 Score: 167.2 bits (422), Expect = 9.8e-40
Identity = 153/533 (28.71%), Postives = 225/533 (42.21%), Query Frame = 0
Query: 140 VHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSSTRSPVVYIEIRNWIMKKFHTNPSVQIV 199
VHV+P H WF+ V +E + V FFSGKS +P Y+E RN I+ K+ NP +
Sbjct: 175 VHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLT 234
Query: 200 SKDLSELEVG-ELDARQEVLEFLDHWGLINFHPFL---PAKSTSTSDVEDENQKE----- 259
D L G +++ V FLDHWG+IN+ P SDV ++ E
Sbjct: 235 ISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPS 294
Query: 260 ---SLVEKLFHFETLESRPSVAPK-TNVTTAPPRLLRESAISEEMVKPEGPSVEYHCNSC 319
+ ++ L F+ +P+ K V ++ P L +S + ++ + HCN C
Sbjct: 295 AALTSIDSLIKFD----KPNCRHKGGEVYSSLPSLDGDSPDLDIRIREH--LCDSHCNHC 354
Query: 320 SADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMESAEVPG-ASGGKWTDQET 379
S + QK+ D LC +CF G+F S DF+ ++ + G G WTDQET
Sbjct: 355 SRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQET 414
Query: 380 LLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLESENNVEVSAKETAVPP 439
LLLLEA+ELY ENW +IA+HV +KSKAQCILHF+++P+ED L+ NVEVS P
Sbjct: 415 LLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLD---NVEVSGVTNTENP 474
Query: 440 SIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQNNSKAEVEVEAALDNFK 499
T D+K T + + + S E++
Sbjct: 475 ------------TNGYDHKGTDSNGD-----------LPGYSEQGSDTEIK--------- 534
Query: 500 PEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGNPVMALAAFLARLVGSDVA 559
L F NPVMAL AFLA VG VA
Sbjct: 535 ----------------------------------LPFVKSPNPVMALVAFLASAVGPRVA 594
Query: 560 CASAHFSLKSMSQKSSSLDLATRHCFILEDPPGDKNAEANSESVVNVEAQKNDSEQCAKQ 619
+ AH SL +S+ +D + + S+++ E Q+ D
Sbjct: 595 ASCAHESLSVLSE---------------DDRMKSEGMQGKEASLLDGENQQQDGAHKTSS 615
Query: 620 RQG--NSTSVFEDKTLSTTNCNIKNGDSVTKETTMDNGNSSDAIGEHDSIVNH 657
+ G T + +DK ++ + + TK + + +IVNH
Sbjct: 655 QNGAEAQTPLPQDKVMAAFRAGL--SAAATKAKLFADHEEREIQRLSANIVNH 615
HSP 2 Score: 49.7 bits (117), Expect = 2.3e-04
Identity = 68/253 (26.88%), Postives = 115/253 (45.45%), Query Frame = 0
Query: 732 SKELDDVPNPLPSVNDPQPMVAADSVIEASNDVALVPVSREKNEPEQTETSKSVVDQGAS 791
S++ D LP V P P++A + + ++ + ++ +E + + +G
Sbjct: 484 SEQGSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLSVLSEDDR-MKSEGMQ 543
Query: 792 KVSDSLLSEENATPQPVKPNSAVGGSDDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTL 851
SLL EN S+ G++ T +DK+ RA L
Sbjct: 544 GKEASLLDGENQQQDGAHKTSSQNGAEAQ------------TPLPQDKVMAAFRAG---L 603
Query: 852 SAAAVKAKVLANQEEDQIRQLSMILIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQR 911
SAAA KAK+ A+ EE +I++LS ++ QL ++E KL F E++ + M+ EQ+++++QR
Sbjct: 604 SAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQR 663
Query: 912 LFQERAQIIAARLGLPASASRGGAPTLPGNRMAMNLAN-----SNPRPPMGMTPQRPPTS 971
ERA++++AR G P GG N M+L+ ++ Q TS
Sbjct: 664 FSAERARMLSARFGSP-----GGISPQTNNLQGMSLSTGGNNINSLMHQQHQQQQASATS 715
Query: 972 GPPGIAATNPNPQ 980
P I + NPQ
Sbjct: 724 QPSIIPGFSNNPQ 715
BLAST of Sed0027635 vs. ExPASy Swiss-Prot
Match:
O14470 (SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr2 PE=1 SV=3)
HSP 1 Score: 158.3 bits (399), Expect = 4.6e-37
Identity = 110/390 (28.21%), Postives = 183/390 (46.92%), Query Frame = 0
Query: 142 VVPNHCGWFSWTEVHPIEERSVSSFFSGKSSTRSPVVYIEIRNWIMKKFHTNPSVQIVSK 201
+VP++ GWF +++H IE RS FF+GKS ++P +Y + R++++ + P+ +
Sbjct: 19 IVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVT 78
Query: 202 DLSELEVGELDARQEVLEFLDHWGLINFHPFLPAKSTSTSDVEDENQKESLVEKLF-HFE 261
VG++ A V FL+ WGLIN+ ++ E + + + H +
Sbjct: 79 ACRRNLVGDVCAIIRVHAFLEQWGLINY------------QIDPETRPAFRLPPISGHVQ 138
Query: 262 TLESRPSVAPKTNVTTAPPRLLRESAISEEMVKPEG------------------------ 321
+ + P V + PP + S+ S+E VK E
Sbjct: 139 AISNTPIVTQEMLAQHPPPSTVGGSS-SQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDK 198
Query: 322 -PSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMESAEVPGA 381
P V+ C +C +CS+ YH K +D+C C+ G+F S+ +S DF+ M++ +
Sbjct: 199 VPRVDKVCFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMDAIDFNHD 258
Query: 382 SGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLESENNVE 441
W++QETLLLLEA+E Y ++WN+IA HV +++K QC++HF+Q+PIED + + +
Sbjct: 259 EEKPWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIEDPYRQKLQG-D 318
Query: 442 VSAKETAVPPSIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQNNSKAEV 501
S + P EN++ V +T AS G+ + +QN S +
Sbjct: 319 FSPFKKGFLPFDENENPVLSTLT---------------YLASIVQQGMKERKQNESVKQG 373
Query: 502 EVEAALDNFKPEDDGQKVSEDIALNALKEA 506
E FK E +A ALK A
Sbjct: 379 ETSFGNSEFK------NPLERVAYYALKSA 373
BLAST of Sed0027635 vs. ExPASy Swiss-Prot
Match:
Q53KK6 (SWI/SNF complex subunit SWI3C homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SWI3C PE=1 SV=1)
HSP 1 Score: 151.0 bits (380), Expect = 7.3e-35
Identity = 143/502 (28.49%), Postives = 213/502 (42.43%), Query Frame = 0
Query: 80 GAGTASANAAPGSVKAQGSEAQRGEAL----AAAAEELNRASRLANLDASFEADFEAVKS 139
G G+A+ AAP + Q + A+ A + ++ S + K
Sbjct: 120 GEGSAAVAAAPVLENISYGQQQVLSGVLPDHASLATDTDKPSTYVCTPPNLMEGHGVTKQ 179
Query: 140 RDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSSTRSPVVYIEIRNWIMKKFHTNPS 199
+HVVP H WFS VH +E + V FFSGKS +P Y+ +RN ++ K+ NPS
Sbjct: 180 FQGRLHVVPKHSDWFSPGIVHRLERQVVPQFFSGKSPGNTPEKYMLLRNKVIAKYLENPS 239
Query: 200 VQIVSKDLSEL--EVGELDARQEVLEFLDHWGLINF------HPFLPAKSTSTSDVEDEN 259
++ + L EL ++ FLD WG+IN+ H L +TS E
Sbjct: 240 KRLAFAECQGLVANTAELYDLSRIVRFLDTWGIINYLASGSVHRGL-RMATSLLREEPTG 299
Query: 260 QKESL------VEKLFHFETLESRPSVAPKTNVTTAPPRLLRESAISEEMVKPEGPSVEY 319
+ + L ++ L F+ + +++ + + ++ ++E K E
Sbjct: 300 ELQLLTAPLKSIDGLILFDRPKCNLQAEDISSLASNSEVVDFDAGLAELDGKIRERLSES 359
Query: 320 HCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMESAEVPGAS-GGKW 379
C+ C + Y K+AD LCS+CF ++ + SS DF ++ + G W
Sbjct: 360 SCSYCLQPLTSLHYQSLKEADIALCSDCFHDARYITGHSSLDFQRIDGDNDRSENDGDSW 419
Query: 380 TDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLESENNVEVSAKE 439
TDQETLLLLE +E Y +NWN IAEHV TKSKAQCI HFI++P+ED LE N+EV +
Sbjct: 420 TDQETLLLLEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLLE---NIEV--PD 479
Query: 440 TAVPPSIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQNNSKAEVEVEAA 499
+VP E + +D S T+GN K+
Sbjct: 480 ASVPFRAETNGYPHLDCNGS----TSGNLPQKI--------------------------- 539
Query: 500 LDNFKPEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGNPVMALAAFLARLV 559
P + L F + NPVM+L FLA +
Sbjct: 540 ----------------------------------PPDNQLPFINSSNPVMSLVGFLASAM 550
Query: 560 GSDVA--CASAHFSLKSMSQKS 561
G VA CASA S+ ++ S
Sbjct: 600 GPRVAASCASAALSVLTVDDDS 550
HSP 2 Score: 72.8 bits (177), Expect = 2.5e-11
Identity = 52/133 (39.10%), Postives = 84/133 (63.16%), Query Frame = 0
Query: 841 DKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLSMILIEKQLHKLESKLAFFNEMDNVTMR 900
+K+K AA+ LSAAA KAK+ A+QEE +I++L+ +I QL +LE KL F E++ + ++
Sbjct: 584 EKVKHAAMCGLSAAATKAKLFADQEEREIQRLTATVINHQLKRLELKLKQFAEVETLLLK 643
Query: 901 VREQLDRSKQRLFQERAQIIAARLGLPASASRGGA-PTLPGNRMAMNLANSNPRPPMGMT 960
EQ++R +QR+ +R +I++ RL P ++ GG+ T+ N M+M +PR PMG+
Sbjct: 644 ECEQVERIRQRIASDRVRIVSTRLASPGNSLPGGSTSTMSSNPMSM-----SPR-PMGVP 703
Query: 961 PQRPPTSGPPGIA 973
P +S P A
Sbjct: 704 GSMPQSSMPAPFA 710
BLAST of Sed0027635 vs. ExPASy Swiss-Prot
Match:
Q6PDG5 (SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2)
HSP 1 Score: 114.8 bits (286), Expect = 5.8e-24
Identity = 197/855 (23.04%), Postives = 302/855 (35.32%), Query Frame = 0
Query: 142 VVPNHCGWFSWTEVHPIEERSVSSFFSGKSSTRSPVVYIEIRNWIMKKFHTNPSVQIVSK 201
++P++ WF + VH IE R++ FF+GK+ +++P +Y+ RN+++ + NP + S
Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 202 DLSELEVGELDARQEVLEFLDHWGLINFHPFLPAKSTSTSDVEDENQKESLVEKLFHFET 261
G++ A V FL+ WGLIN+ ++ T HF
Sbjct: 485 ACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTS-----------HFHV 544
Query: 262 LESRPSVAPKTNVTTAPPRLLRESAISEEMVK-PEGPSVEYHCNSCSADCSRKRYHCQKQ 321
L PS + P+ ++S+ S++M+ PE +K
Sbjct: 545 LADTPS-----GLVPLQPKPPQQSSASQQMLNFPEKGK-------------------EKP 604
Query: 322 AD---FDLCSECFTSGKFDSNMSSPDFILMESAEVPGASGGKWTDQETLLLLEALELYKE 381
AD F L ++ +T S ++ ++ +WT+QETLLLLEALE+YK+
Sbjct: 605 ADMQNFGLRTDMYTKKNVPS-----------KSKAAASATREWTEQETLLLLEALEMYKD 664
Query: 382 NWNEIAEHVATKSKAQCILHFIQMPIEDTFLESENNVEVSAKETAVPPSIENDSSVPMDI 441
+WN+++EHV ++++ +CILHF+++PIED +LE E S A P
Sbjct: 665 DWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDS---EASLGPLAYQP------------ 724
Query: 442 TESMDNKTTGNEASKVETASKEDTGVVQVEQNNSKAEVEVEAALDNFKPEDDGQKVSEDI 501
Sbjct: 725 ------------------------------------------------------------ 784
Query: 502 ALNALKEAFEAIGYGLTPDQHALSFADVGNPVMALAAFLARLVGSDVACASAHFSLKSMS 561
+ F+ GNPVM+ AFLA +V VA A+A +L+ S
Sbjct: 785 ----------------------IPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFS 844
Query: 562 QKSSSLDLATRHCFILEDPPGDKNAEANSESVVNVEAQKNDSEQCAKQRQGNSTSVFEDK 621
+ + A VEA E+ AK
Sbjct: 845 KMKEEVPTAL------------------------VEAHVRKVEEAAKV------------ 904
Query: 622 TLSTTNCNIKNGDSVTKETTMDNGNSSDAIGEHDSIVNHGPDGTSNLKELREPELAKDER 681
G + A G S G GT++ EPE ++
Sbjct: 905 ----------------------TGKADPAFGLESS----GIAGTAS----DEPERIEESG 964
Query: 682 TSIVNEPENIESKLTTNPVEKLGEETSVEKPSDVHVHAEKTEIYNQVPSHSDKTSKELDD 741
T PE + P E +VE+ E E ++VP ++ KE D
Sbjct: 965 TEEA-RPEGQAADEKKEPKEPREGGGAVEE--------EAKEEISEVPKKDEEKGKEGDS 997
Query: 742 VPNPLPSVNDPQPMVAADSVIEASNDVALVPVSREKNEPEQTETSKSVVDQGASKVSDSL 801
S DP +++ D E TE + V+
Sbjct: 1025 EKESEKSDGDP--------IVDPEKD------------KEPTEGQEEVL----------- 997
Query: 802 LSEENATPQPVKPNSAVGGSDDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTLSAAAVK 861
+E A P+ + K E G L AA L+AAAVK
Sbjct: 1085 --KEVAEPE--------------GERKTKVERDIGEG-------NLSTAAAAALAAAAVK 997
Query: 862 AKVLANQEEDQIRQLSMILIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERA 921
AK LA EE +I+ L +L+E Q+ KLE KL F E++ + R RE L+ +Q+L +R
Sbjct: 1145 AKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQ 997
Query: 922 QIIAARLGLPASASR------------GGAPTLPGNRMAMNLANSNPRPPMGMTPQRPPT 977
+L +R PTLP S P PP G PPT
Sbjct: 1205 AFHMEQLKYAEMRARQQHFQQMHQQQQQQPPTLP--------PGSQPIPPTGAA--GPPT 997
BLAST of Sed0027635 vs. ExPASy TrEMBL
Match:
A0A6J1C5U7 (SWI/SNF complex subunit SWI3D OS=Momordica charantia OX=3673 GN=LOC111007653 PE=4 SV=1)
HSP 1 Score: 1491.5 bits (3860), Expect = 0.0e+00
Identity = 830/1036 (80.12%), Postives = 896/1036 (86.49%), Query Frame = 0
Query: 1 MEEKRRDAGNLPANSTASPSSEPPTSRRRGGAQKRKASALGGSNSSSAPSKRVTRDKSAL 60
MEEKRRDA NLP NST SPS EPP+SRRR GAQKRKASALG SN+SSAPSKRVTRDKSAL
Sbjct: 1 MEEKRRDAANLPVNSTDSPSXEPPSSRRRAGAQKRKASALGVSNTSSAPSKRVTRDKSAL 60
Query: 61 SHPPNHSGPFTRARLGPNNGAGTASAN-------AAPGSVKAQG----SEAQRGEALAAA 120
SHP NHSGPFTRARLGPNN AGTAS N AA GSVK +G SE QRGEA+ AA
Sbjct: 61 SHPQNHSGPFTRARLGPNNVAGTASGNAAGGLAAAAAGSVKLEGSVLHSEVQRGEAIVAA 120
Query: 121 AEELNRASRLANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSG 180
AEELN+ SRLANL+ASFEADFEA+KSR +VH VPNHCGWFSWT+VHPIEER++SSFFSG
Sbjct: 121 AEELNKVSRLANLEASFEADFEAIKSRGADVHAVPNHCGWFSWTKVHPIEERTMSSFFSG 180
Query: 181 KSSTRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINF 240
KS TRSP +YI+IRNWIMKKFH NPS+QI SKDLSELEVGEL+ARQEV+EFLDHWGLINF
Sbjct: 181 KSGTRSPDMYIDIRNWIMKKFHANPSMQIESKDLSELEVGELEARQEVMEFLDHWGLINF 240
Query: 241 HPFLPAKSTSTSDVEDENQKESLVEKLFHFETLESRPSVAPKTNV-TTAPPRLLRESAIS 300
HPF+P STSTSDV+DEN KESLVEKLF FETLES PS+ PKTNV TTAPPRLLRESAI
Sbjct: 241 HPFIPTDSTSTSDVDDENLKESLVEKLFQFETLESCPSIVPKTNVTTTAPPRLLRESAIP 300
Query: 301 EEMVKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILME 360
EEMV+PEGPSVEYHCNSCSADCSRKRYHCQKQADFDLC ECF +GKFDS+MSS DFILME
Sbjct: 301 EEMVRPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCXECFNNGKFDSDMSSSDFILME 360
Query: 361 SAEVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFL 420
AEVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATK+KAQCILHFIQMPIEDTFL
Sbjct: 361 PAEVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFL 420
Query: 421 ESENNVEVSAKETAVPPSIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQ 480
ESE+NVEVS KETAVPPS ENDSSVP DITE MDNK TG EA VE A+K+DTG V+V Q
Sbjct: 421 ESEDNVEVSPKETAVPPSSENDSSVPADITEPMDNKPTGKEALNVENANKDDTGEVKVGQ 480
Query: 481 NNSKAE-VEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGN 540
NSK+E V +AALD K +D GQKVSEDIALNAL+EAFEAIGY TP++ LSFADVGN
Sbjct: 481 ENSKSEDVGDKAALDKSKSDDGGQKVSEDIALNALREAFEAIGYVXTPERR-LSFADVGN 540
Query: 541 PVMALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRHCFILEDPPGDKNAEANSE 600
PV+ALAAFLARLVGSDVA ASAHFSLKS+SQKS SL+LATRHCFILEDPP DKNA++NSE
Sbjct: 541 PVVALAAFLARLVGSDVASASAHFSLKSISQKSPSLELATRHCFILEDPPDDKNAQSNSE 600
Query: 601 SVVNVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNGDSVTKETTMDNGNSSDAI 660
SVVNVEAQKND+EQC KQRQ +STSV +D+ LST N KNG+SVTKETT+DNGNSSDAI
Sbjct: 601 SVVNVEAQKNDNEQCEKQRQDDSTSVLDDRALSTNKSNNKNGESVTKETTVDNGNSSDAI 660
Query: 661 GEHDSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIESKLTTNPVEKLGEETSVEK 720
EHD ++ HG DGTSNL ELREPEL KDERT IV E EN+ES LTTNPVEKLGE T VEK
Sbjct: 661 REHDPVIIHGSDGTSNLNELREPELLKDERTGIVKESENLESNLTTNPVEKLGEGTHVEK 720
Query: 721 PS-------DVHV----HAEKTEIYNQVPSHSDKTSKELDDVPNPLPSVNDPQPMVAADS 780
PS DVH+ HAE+T+ QVPSHS KTSK+LDDVPNPLPSVN+PQP++AA+S
Sbjct: 721 PSQPILSSEDVHMSDLEHAERTD-QKQVPSHSAKTSKDLDDVPNPLPSVNEPQPLIAANS 780
Query: 781 VIEASNDVALVPVSREKNEPEQTETSKSVVDQGASKVSDSLLSEENATPQPVKPNSAV-G 840
V EASND A+V S +K E QTETS SVVDQGAS VSDSLLS +NA PQPV PNS +
Sbjct: 781 VKEASNDGAVVLDSHKKYETSQTETSNSVVDQGASTVSDSLLSADNAMPQPVNPNSVIES 840
Query: 841 GSDDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLSMI 900
G+ DNQSKDNKEE S TSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQL+MI
Sbjct: 841 GAGDNQSKDNKEEKSSCTSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLAMI 900
Query: 901 LIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASASRGGA 960
LIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPA++SR A
Sbjct: 901 LIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPATSSRVMA 960
Query: 961 PTLPGNRMAMNLANSNPRPPMGMTPQRPPTSGPPGIAATNPN----PQYATTTSATISGS 1008
P+LP NRMAMN ANS PRPPMGMT QRPPTSGP G+AATNPN PQYA TTS TISGS
Sbjct: 961 PSLPANRMAMNFANSVPRPPMGMTSQRPPTSGPVGMAATNPNLQPQPQYA-TTSTTISGS 1020
BLAST of Sed0027635 vs. ExPASy TrEMBL
Match:
A0A6J1GJX9 (SWI/SNF complex subunit SWI3D-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455037 PE=4 SV=1)
HSP 1 Score: 1456.0 bits (3768), Expect = 0.0e+00
Identity = 809/1030 (78.54%), Postives = 884/1030 (85.83%), Query Frame = 0
Query: 1 MEEKRRDAGNLPANSTASPSSEPPTSRRRGGAQKRKASALGGSNSSSAPSKRVTRDKSAL 60
ME+KRRDAGNLPANST SPSSEPP+SRRR GAQKRKAS LGGS SSSAPSKRVTR+KSAL
Sbjct: 1 MEDKRRDAGNLPANSTDSPSSEPPSSRRRAGAQKRKASTLGGSISSSAPSKRVTREKSAL 60
Query: 61 SHPPNHSGPFTRARLGPNNGAGTASAN----AAPGSVKAQG----SEAQRGEALAAAAEE 120
SHPPNH+GPFTRAR GPNN AG ASAN +A GSVK +G SE QRG+AL AAAEE
Sbjct: 61 SHPPNHNGPFTRARFGPNNVAGAASANGGLASAAGSVKTEGSLLHSEVQRGDALVAAAEE 120
Query: 121 LNRASRLANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSS 180
LN+A+RLANL+ASFEADFEA+KSR N HVVPNHCGWFSWTEVHPIEERS+ SFFSGK
Sbjct: 121 LNKATRLANLEASFEADFEAIKSRSANSHVVPNHCGWFSWTEVHPIEERSMPSFFSGKDG 180
Query: 181 TRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHPF 240
TRSP +YI+IRNWIMKKFH NPS Q+ +KDLSE+EVGE DAR+EV+EFLDHWGLINFHPF
Sbjct: 181 TRSPDIYIKIRNWIMKKFHANPSTQLEAKDLSEMEVGEQDARKEVMEFLDHWGLINFHPF 240
Query: 241 LPAKSTSTSDVEDENQKESLVEKLFHFETLESRPSVAPKTNVTT-APPRLLRESAISEEM 300
L A+S STSD++DE+QK+SLVEKLFHFETLES PS+ PK NVTT APPRLLRESAISEEM
Sbjct: 241 LSAESISTSDLDDESQKDSLVEKLFHFETLESCPSIVPKINVTTAAPPRLLRESAISEEM 300
Query: 301 VKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMESAE 360
+PEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECF +GKFDS+MSS DFILMES
Sbjct: 301 TRPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFNNGKFDSDMSSSDFILMESVG 360
Query: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLESE 420
VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATK+KAQCILHFIQMPIEDTFLESE
Sbjct: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFLESE 420
Query: 421 NNVEVSAKETAVPPSIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQNNS 480
+NVE AKET VPP ENDSSVP DITESMDNK T EAS ETA+KEDTG V+V +NS
Sbjct: 421 DNVEDGAKET-VPPLTENDSSVPTDITESMDNKATEKEASNTETATKEDTGEVKVGLDNS 480
Query: 481 KAE-VEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGNPVM 540
K+E VE +AALDN K ED QKVSEDIALNAL+EAFEAIGY LTP +H LSFADVGNPVM
Sbjct: 481 KSEDVEGKAALDNSKLEDGDQKVSEDIALNALREAFEAIGYVLTP-EHPLSFADVGNPVM 540
Query: 541 ALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRHCFILEDPPGDKNAEANSESVV 600
ALAAFLARLVGSDVA ASA FSLKS+SQKS SL+LATRHCFILEDPP D+ A+ANSES+V
Sbjct: 541 ALAAFLARLVGSDVASASARFSLKSVSQKSPSLELATRHCFILEDPPDDQKAKANSESIV 600
Query: 601 NVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNGDSVTKETTMDNGNSSDAIGEH 660
NVEAQKND EQCAKQR NSTSV +D LS + N KNG+SVTKE T+DN NSSDAI EH
Sbjct: 601 NVEAQKNDKEQCAKQRPDNSTSVLDDGALSANDGNNKNGESVTKE-TIDNENSSDAIIEH 660
Query: 661 DSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIESKLTTNPVEKLGEETSVEKPS- 720
+ I NH D TSNLKELREPE+ + ERT IV E EN+ESK T+NPVEKLGE TS EKPS
Sbjct: 661 NPITNHDSDRTSNLKELREPEIPEVERTGIVKESENVESKSTSNPVEKLGEGTSAEKPSQ 720
Query: 721 ------DVHV----HAEKTEIYNQVPSHSDKTSKELDDVPNPLPSVNDPQPMVAADSVIE 780
DVH+ HAEKTEI QVPSHS KT KELDD PN LPS N+PQP ++A+SV E
Sbjct: 721 PKLSPKDVHMSDLQHAEKTEIQKQVPSHSAKTKKELDDEPNHLPSANEPQPTISANSVKE 780
Query: 781 ASNDVALVPVSREKNEPEQTETSKSVVDQGASKVSDSLLSEENATPQPVKPNSAV--GGS 840
AS DVA++P S NEP +TETSKSVVDQ ASKV+DSL S ENATP PVKP S + G +
Sbjct: 781 ASKDVAIIPDSHNGNEPAKTETSKSVVDQEASKVADSLPSTENATPLPVKPTSVIERGAA 840
Query: 841 DDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLSMILI 900
DDNQSKDNKEE+S SKKEDKIDK KRAAVTTLSAAAVKAK+LANQEEDQIRQL+MILI
Sbjct: 841 DDNQSKDNKEENSNCMSKKEDKIDKFKRAAVTTLSAAAVKAKILANQEEDQIRQLAMILI 900
Query: 901 EKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASASRGGAPT 960
EKQLHKLESKLAFFN+M+NVT+R+REQLDRSKQRLFQERAQIIAARLGLPAS+SRGGAPT
Sbjct: 901 EKQLHKLESKLAFFNDMENVTVRMREQLDRSKQRLFQERAQIIAARLGLPASSSRGGAPT 960
Query: 961 LPGNRMAMNLANSNPRPPMGMTPQRPPTSGPPGIAATNPNPQYATTTSATISGSSFEPAN 1008
LP NRM MN AN+ PRPPMGM PQRPPTSG PG+AA+NPNPQY TT TISGSSF PAN
Sbjct: 961 LPTNRMPMNFANTVPRPPMGMVPQRPPTSGLPGMAASNPNPQY-PTTGTTISGSSFRPAN 1020
BLAST of Sed0027635 vs. ExPASy TrEMBL
Match:
A0A6J1ETV7 (SWI/SNF complex subunit SWI3D-like OS=Cucurbita moschata OX=3662 GN=LOC111437510 PE=4 SV=1)
HSP 1 Score: 1455.7 bits (3767), Expect = 0.0e+00
Identity = 802/990 (81.01%), Postives = 872/990 (88.08%), Query Frame = 0
Query: 1 MEEKRRDAGNLPANSTASPSSEPPTSRRRGGAQKRKASALGGSNSSSAPSKRVTRDKSAL 60
MEEKRRDAGNLPAN+T SPSSEPP+SRRR GAQKRK SALGGSNSSSAPSKRVTRDK AL
Sbjct: 1 MEEKRRDAGNLPANTTDSPSSEPPSSRRRAGAQKRKVSALGGSNSSSAPSKRVTRDKFAL 60
Query: 61 SHPPNHSGPFTRARLGPNNGAGTASANA-----APGSVKAQG----SEAQRGEALAAAAE 120
SHPPNH+GPFTRARLGPNNGAGTAS NA A GSVK +G SEAQRG+ L AAAE
Sbjct: 61 SHPPNHNGPFTRARLGPNNGAGTASGNAAGGLSAAGSVKVEGSFLHSEAQRGDTLVAAAE 120
Query: 121 ELNRASRLANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKS 180
ELN+ASRLANL+ASF ADFE++KSR N HVVPNHCGWFSWT+VHPIEERS+ SFFSGKS
Sbjct: 121 ELNKASRLANLEASFVADFESIKSRGTNAHVVPNHCGWFSWTKVHPIEERSMPSFFSGKS 180
Query: 181 STRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHP 240
TRSP +YIEIRNWIMKKFH NPS QI SKD+SE+E+GELDARQEV+EFLDHWGLINFHP
Sbjct: 181 GTRSPDIYIEIRNWIMKKFHANPSTQIESKDVSEMEIGELDARQEVMEFLDHWGLINFHP 240
Query: 241 FLPAKSTSTSDVEDENQKESLVEKLFHFETLESRPSVAPKTNVTTAPPRLLRESAISEEM 300
FL A STSTSDV+DE+QK+SLVEKLFHFETLES PSV PKTNVT APPRLLRESAISEEM
Sbjct: 241 FLSADSTSTSDVDDEDQKDSLVEKLFHFETLESSPSVVPKTNVTIAPPRLLRESAISEEM 300
Query: 301 VKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMESAE 360
V+PEGPSVEYHCNSCS DCSRKRYHCQKQADFDLCSECF +GKFDS+MSS DFILMESAE
Sbjct: 301 VRPEGPSVEYHCNSCSGDCSRKRYHCQKQADFDLCSECFNNGKFDSDMSSSDFILMESAE 360
Query: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLESE 420
VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATK+KAQCILHFIQMPIED+FLESE
Sbjct: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDSFLESE 420
Query: 421 NNVEVSAKETAVPPSIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQNNS 480
NN EVSAKET VPPSIENDSSVPMDITE MDNKTTG EAS VE ASKEDT V+V Q+NS
Sbjct: 421 NNDEVSAKETVVPPSIENDSSVPMDITELMDNKTTGKEASNVENASKEDTVEVKVGQDNS 480
Query: 481 KA-EVEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGNPVM 540
K+ +VEV+AALDN K ED GQKVSEDIALNAL+EAFEAIGY LT DQH LSF+DVGNPVM
Sbjct: 481 KSKDVEVKAALDNSKTEDGGQKVSEDIALNALREAFEAIGYVLTSDQHPLSFSDVGNPVM 540
Query: 541 ALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRHCFILEDPPGDKNAEANSESVV 600
ALAAFLARLVGSDV ASAHFSLKSMSQKS SLDLATRHCFILEDP DK A+ANSE VV
Sbjct: 541 ALAAFLARLVGSDVVSASAHFSLKSMSQKSPSLDLATRHCFILEDPLDDK-AQANSERVV 600
Query: 601 NVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNGDSVTKETTMDNGNSSDAIGEH 660
NVEAQ+N +EQC KQR+ NSTSV +D LSTTN KNG+SVT+ETTM+N NS+DA EH
Sbjct: 601 NVEAQQNVNEQCEKQRKDNSTSVLDDSALSTTNSIYKNGESVTEETTMENRNSADATKEH 660
Query: 661 DSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIESKLTTNPVEKLGEETSVEKPS- 720
D +VNHG D T+ LKEL EPE+ KD+RTSIV E EN+ESKLTTN V+KLGEETSVEKPS
Sbjct: 661 DPMVNHGSDVTNKLKELTEPEVPKDDRTSIVKETENMESKLTTNTVQKLGEETSVEKPSQ 720
Query: 721 ------DVHV----HAEKTEIYNQVPSHSDKTSKELDDVPNPLPSVNDPQPMVAADSVIE 780
D+H+ +AEKTEI QVPS S TSK +DDVPNPLPSVN+ QP+VAA+SV
Sbjct: 721 STLLSKDIHMSDLRNAEKTEIQKQVPSPSVNTSK-IDDVPNPLPSVNELQPLVAANSVKV 780
Query: 781 ASNDVALVPVSREKNEPEQTETSKSVVDQGASKVSDSLLSEENATPQPVKPNSAVG-GSD 840
AS+DVA+V R+KNEP QTETSKSVVDQGASKVSDSL +EENA PQPVKPN + G+D
Sbjct: 781 ASSDVAMVSDPRDKNEPAQTETSKSVVDQGASKVSDSLPTEENAPPQPVKPNPVIDKGTD 840
Query: 841 DNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLSMILIE 900
DNQSK+N+EE+SK TSKKE+KIDKLKRAAVTTL+AAAVKAKVLANQEEDQIRQL+MILIE
Sbjct: 841 DNQSKNNEEENSKCTSKKEEKIDKLKRAAVTTLAAAAVKAKVLANQEEDQIRQLAMILIE 900
Query: 901 KQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASASRGGAPTL 960
KQLHKLESKLA+FN+MDNV+MR+REQLDRSKQRLFQERAQIIAARLG+PASASRG AP
Sbjct: 901 KQLHKLESKLAYFNDMDNVSMRIREQLDRSKQRLFQERAQIIAARLGVPASASRGVAP-- 960
Query: 961 PGNRMAMNLANSNPRPPMGMTPQRPPTSGP 969
PGNRMAMN NS PRPPMGM PQRPPTSGP
Sbjct: 961 PGNRMAMNFPNSVPRPPMGMAPQRPPTSGP 986
BLAST of Sed0027635 vs. ExPASy TrEMBL
Match:
A0A6J1GK40 (SWI/SNF complex subunit SWI3D-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455037 PE=4 SV=1)
HSP 1 Score: 1455.7 bits (3767), Expect = 0.0e+00
Identity = 809/1029 (78.62%), Postives = 884/1029 (85.91%), Query Frame = 0
Query: 1 MEEKRRDAGNLPANSTASPSSEPPTSRRRGGAQKRKASALGGSNSSSAPSKRVTRDKSAL 60
ME+KRRDAGNLPANST SPSSEPP+SRRR GAQKRKAS LGGS SSSAPSKRVTR+KSAL
Sbjct: 1 MEDKRRDAGNLPANSTDSPSSEPPSSRRRAGAQKRKASTLGGSISSSAPSKRVTREKSAL 60
Query: 61 SHPPNHSGPFTRARLGPNNGAGTASAN----AAPGSVKAQG----SEAQRGEALAAAAEE 120
SHPPNH+GPFTRAR GPNN AG ASAN +A GSVK +G SE QRG+AL AAAEE
Sbjct: 61 SHPPNHNGPFTRARFGPNNVAGAASANGGLASAAGSVKTEGSLLHSEVQRGDALVAAAEE 120
Query: 121 LNRASRLANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSS 180
LN+A+RLANL+ASFEADFEA+KSR N HVVPNHCGWFSWTEVHPIEERS+ SFFSGK
Sbjct: 121 LNKATRLANLEASFEADFEAIKSRSANSHVVPNHCGWFSWTEVHPIEERSMPSFFSGKDG 180
Query: 181 TRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHPF 240
TRSP +YI+IRNWIMKKFH NPS Q+ +KDLSE+EVGE DAR+EV+EFLDHWGLINFHPF
Sbjct: 181 TRSPDIYIKIRNWIMKKFHANPSTQLEAKDLSEMEVGEQDARKEVMEFLDHWGLINFHPF 240
Query: 241 LPAKSTSTSDVEDENQKESLVEKLFHFETLESRPSVAPKTNVTT-APPRLLRESAISEEM 300
L A+S STSD++DE+QK+SLVEKLFHFETLES PS+ PK NVTT APPRLLRESAISEEM
Sbjct: 241 LSAESISTSDLDDESQKDSLVEKLFHFETLESCPSIVPKINVTTAAPPRLLRESAISEEM 300
Query: 301 VKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMESAE 360
+PEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECF +GKFDS+MSS DFILMES
Sbjct: 301 TRPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFNNGKFDSDMSSSDFILMESVG 360
Query: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLESE 420
VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATK+KAQCILHFIQMPIEDTFLESE
Sbjct: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFLESE 420
Query: 421 NNVEVSAKETAVPPSIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQNNS 480
+NVE AKET VPP ENDSSVP DITESMDNK T EAS ETA+KEDTG V+V +NS
Sbjct: 421 DNVEDGAKET-VPPLTENDSSVPTDITESMDNKATEKEASNTETATKEDTGEVKVGLDNS 480
Query: 481 KAE-VEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGNPVM 540
K+E VE +AALDN K ED QKVSEDIALNAL+EAFEAIGY LTP +H LSFADVGNPVM
Sbjct: 481 KSEDVEGKAALDNSKLEDGDQKVSEDIALNALREAFEAIGYVLTP-EHPLSFADVGNPVM 540
Query: 541 ALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRHCFILEDPPGDKNAEANSESVV 600
ALAAFLARLVGSDVA ASA FSLKS+SQKS SL+LATRHCFILEDPP D+ A+ANSES+V
Sbjct: 541 ALAAFLARLVGSDVASASARFSLKSVSQKSPSLELATRHCFILEDPPDDQKAKANSESIV 600
Query: 601 NVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNGDSVTKETTMDNGNSSDAIGEH 660
NVEAQKND EQCAKQR NSTSV +D LS + N KNG+SVTKE T+DN NSSDAI EH
Sbjct: 601 NVEAQKNDKEQCAKQRPDNSTSVLDDGALSANDGNNKNGESVTKE-TIDNENSSDAIIEH 660
Query: 661 DSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIESKLTTNPVEKLGEETSVEKPS- 720
+ I NH D TSNLKELREPE+ + ERT IV E EN+ESK T+NPVEKLGE TS EKPS
Sbjct: 661 NPITNHDSDRTSNLKELREPEIPEVERTGIVKESENVESKSTSNPVEKLGEGTSAEKPSQ 720
Query: 721 ------DVHV----HAEKTEIYNQVPSHSDKTSKELDDVPNPLPSVNDPQPMVAADSVIE 780
DVH+ HAEKTEI QVPSHS KT KELDD PN LPS N+PQP ++A+SV E
Sbjct: 721 PKLSPKDVHMSDLQHAEKTEIQKQVPSHSAKTKKELDDEPNHLPSANEPQPTISANSVKE 780
Query: 781 ASNDVALVPVSREKNEPEQTETSKSVVDQGASKVSDSLLSEENATPQPVKPNSAV-GGSD 840
AS DVA++P S NEP +TETSKSVVDQ ASKV+DSL S ENATP PVKP S + G+D
Sbjct: 781 ASKDVAIIPDSHNGNEPAKTETSKSVVDQEASKVADSLPSTENATPLPVKPTSVIERGAD 840
Query: 841 DNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLSMILIE 900
DNQSKDNKEE+S SKKEDKIDK KRAAVTTLSAAAVKAK+LANQEEDQIRQL+MILIE
Sbjct: 841 DNQSKDNKEENSNCMSKKEDKIDKFKRAAVTTLSAAAVKAKILANQEEDQIRQLAMILIE 900
Query: 901 KQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASASRGGAPTL 960
KQLHKLESKLAFFN+M+NVT+R+REQLDRSKQRLFQERAQIIAARLGLPAS+SRGGAPTL
Sbjct: 901 KQLHKLESKLAFFNDMENVTVRMREQLDRSKQRLFQERAQIIAARLGLPASSSRGGAPTL 960
Query: 961 PGNRMAMNLANSNPRPPMGMTPQRPPTSGPPGIAATNPNPQYATTTSATISGSSFEPANQ 1008
P NRM MN AN+ PRPPMGM PQRPPTSG PG+AA+NPNPQY TT TISGSSF PANQ
Sbjct: 961 PTNRMPMNFANTVPRPPMGMVPQRPPTSGLPGMAASNPNPQY-PTTGTTISGSSFRPANQ 1020
BLAST of Sed0027635 vs. ExPASy TrEMBL
Match:
A0A6J1I4Y3 (SWI/SNF complex subunit SWI3D isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471039 PE=4 SV=1)
HSP 1 Score: 1444.9 bits (3739), Expect = 0.0e+00
Identity = 804/1030 (78.06%), Postives = 880/1030 (85.44%), Query Frame = 0
Query: 1 MEEKRRDAGNLPANSTASPSSEPPTSRRRGGAQKRKASALGGSNSSSAPSKRVTRDKSAL 60
MEEKRRDA NLPANST SPSSEPP+SRRR GAQKRKAS LGGS SSSAPSKRVTR+KSAL
Sbjct: 1 MEEKRRDARNLPANSTDSPSSEPPSSRRRAGAQKRKASTLGGSISSSAPSKRVTREKSAL 60
Query: 61 SHPPNHSGPFTRARLGPNNGAGTASAN----AAPGSVKAQG----SEAQRGEALAAAAEE 120
+HPPNH+GPFTRAR GPNN AG ASAN +A SVK +G SE QRG+AL AAAEE
Sbjct: 61 THPPNHNGPFTRARFGPNNVAGAASANGGLASAAESVKTEGSLLHSEVQRGDALVAAAEE 120
Query: 121 LNRASRLANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSS 180
LN+A+RLAN++ASFEADFEA+KSR N HVVPNHCGWFSWTEVHPIEERS+ SFFSGK
Sbjct: 121 LNKATRLANMEASFEADFEAIKSRSANAHVVPNHCGWFSWTEVHPIEERSMPSFFSGKDG 180
Query: 181 TRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHPF 240
TRSP +YI+IRNWIMKKFH NPS Q+ +KDLSELEVGE DAR+EV+EFLDHWGLINFHP
Sbjct: 181 TRSPDIYIKIRNWIMKKFHANPSTQLEAKDLSELEVGEQDARKEVMEFLDHWGLINFHPL 240
Query: 241 LPAKSTSTSDVEDENQKESLVEKLFHFETLESRPSVAPKTNVTT-APPRLLRESAISEEM 300
L A+S STSD++DE+QK+SLVEKLFHFETLES PS+ PK NVTT APPRLLRESAISEE+
Sbjct: 241 LSAESISTSDLDDESQKDSLVEKLFHFETLESCPSIVPKINVTTAAPPRLLRESAISEEL 300
Query: 301 VKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMESAE 360
+PEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECF +GKFDS+MSS DFILMES
Sbjct: 301 TRPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFNNGKFDSDMSSSDFILMESVG 360
Query: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLESE 420
VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATK+KAQCILHFIQMPIEDTFLESE
Sbjct: 361 VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFLESE 420
Query: 421 NNVEVSAKETAVPPSIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQNNS 480
+NVE AKET VPP ENDSSVP DITES+DNK T EAS ETA+KEDTG V+V +NS
Sbjct: 421 DNVEDGAKET-VPPLTENDSSVPTDITESLDNKATEKEASNTETATKEDTGEVKVGLDNS 480
Query: 481 KAE-VEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGNPVM 540
K+E VE +AALDN K ED QKVSEDIALNAL+EAFEAIGY LTP +H LSFADVGNPVM
Sbjct: 481 KSEDVEGKAALDNSKLEDGDQKVSEDIALNALREAFEAIGYVLTP-EHPLSFADVGNPVM 540
Query: 541 ALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRHCFILEDPPGDKNAEANSESVV 600
ALAAFLARLVGSDVA ASA FSLKS+SQKS SL+LATRHCFILEDPP + A+ANS+S+V
Sbjct: 541 ALAAFLARLVGSDVASASARFSLKSISQKSPSLELATRHCFILEDPPDVEKAKANSQSIV 600
Query: 601 NVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNGDSVTKETTMDNGNSSDAIGEH 660
NVE QKND EQCAKQR NSTSV +D LST + N KNG+ VTKE TMDN NSSDAI EH
Sbjct: 601 NVETQKNDKEQCAKQRPDNSTSVLDDGALSTNDSNNKNGELVTKE-TMDNENSSDAIIEH 660
Query: 661 DSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIESKLTTNPVEKLGEETSVEK--- 720
+ I NH D TSNLKE REPEL + ERT IV E EN+ESK T+NPVEKLGE TS EK
Sbjct: 661 NPITNHDSDRTSNLKESREPELPEVERTGIVKECENVESKSTSNPVEKLGEGTSAEKSSQ 720
Query: 721 ----PSDVHV----HAEKTEIYNQVPSHSDKTSKELDDVPNPLPSVNDPQPMVAADSVIE 780
P DVH+ HAEKTEI QVPSHS KT KELDD PN LPS N+PQP ++A+SV E
Sbjct: 721 PKLSPKDVHMSDLQHAEKTEIQKQVPSHSAKTKKELDDEPNHLPSANEPQPTISANSVKE 780
Query: 781 ASNDVALVPVSREKNEPEQTETSKSVVDQGASKVSDSLLSEENATPQPVKPNSAV--GGS 840
AS DVA++P S +NEP QTETSKSVVDQGASKV+DSL S ENATP PVKP S + G +
Sbjct: 781 ASKDVAIIPDSHNENEPAQTETSKSVVDQGASKVADSLPSAENATPLPVKPTSVIERGAA 840
Query: 841 DDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTLSAAAVKAKVLANQEEDQIRQLSMILI 900
DDNQSKDNKEE+S SKKEDKIDKLKRAAVTTLSAAAVKAK+LANQEEDQIR L+MILI
Sbjct: 841 DDNQSKDNKEENSNCMSKKEDKIDKLKRAAVTTLSAAAVKAKILANQEEDQIRHLAMILI 900
Query: 901 EKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASASRGGAPT 960
EKQLHKLESKLAFFN+MDNVT+R+REQLDRSKQRLFQERAQIIAARLGLPAS+SRGGAPT
Sbjct: 901 EKQLHKLESKLAFFNDMDNVTVRMREQLDRSKQRLFQERAQIIAARLGLPASSSRGGAPT 960
Query: 961 LPGNRMAMNLANSNPRPPMGMTPQRPPTSGPPGIAATNPNPQYATTTSATISGSSFEPAN 1008
LP NRM MN AN+ PRPPMGM P+RPPTSG PG+AA+NPNPQY TTS TISGSSF PAN
Sbjct: 961 LPTNRMPMNFANTVPRPPMGMVPKRPPTSGLPGMAASNPNPQY-PTTSTTISGSSFRPAN 1020
BLAST of Sed0027635 vs. TAIR 10
Match:
AT4G34430.1 (DNA-binding family protein )
HSP 1 Score: 687.6 bits (1773), Expect = 1.5e-197
Identity = 488/1053 (46.34%), Postives = 632/1053 (60.02%), Query Frame = 0
Query: 1 MEEKRRD-AGNL--PANSTASPSSEP-PTSRRRGGAQKRKASALGGSN-SSSAPSKR-VT 60
MEEKRRD AG L +S SP+SEP P RRRGG KRKA+ALGGSN SSAPSKR +T
Sbjct: 1 MEEKRRDSAGTLAFAGSSGDSPASEPMPAPRRRGGGLKRKANALGGSNFFSSAPSKRMLT 60
Query: 61 RDKSAL-SHPPNHSGPFTRARLGPNNGAGTASANAAPGSVKAQGSEAQRGEALAAAAEEL 120
R+K+ L S P H+GP TRAR P+ A + A G++ ++ + EE
Sbjct: 61 REKAMLASFSPVHNGPLTRARQAPSIMPSAADGVKSEVLNVAVGADGEKPK----EEEER 120
Query: 121 NRASR-LANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSS 180
N+A R L+A EADFEA++SRD NVHVVPNHCGWFSW ++HP+EERS+ SFF+GK
Sbjct: 121 NKAIREWEALEAKIEADFEAIRSRDSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLE 180
Query: 181 TRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHPF 240
R+ VY EIRNWIM KFH+NP++QI KDL+ELEVG+ +A+QEV+EFLD+WGLINFHPF
Sbjct: 181 GRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPF 240
Query: 241 LPAKSTST-SDVEDENQKESLVEKLFHFETLESRPSVA--PKTNVTTAPPRLLRESAISE 300
P + ST SD +D KESL+ L+ F+ E+ P + P+ P L + ++
Sbjct: 241 PPTDTGSTASDHDDLGDKESLLNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAAD 300
Query: 301 EMVKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMES 360
E++K EGP+VEYHCNSCSADCSRKRYHC KQADFDLC+ECF SGKF S+MSS DFILME
Sbjct: 301 ELLKQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEP 360
Query: 361 AEVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLE 420
AE PG GKWTDQETLLLLEALE++KENWNEIAEHVATK+KAQC+LHF+QMPIED FL+
Sbjct: 361 AEAPGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLD 420
Query: 421 SENNVEVSAKETAVPPSIENDSSVPMDITESMDNK---------------TTGNEASKVE 480
+ + +K+T ++D+SV D E +NK GNE +
Sbjct: 421 QIDYKDPISKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQ 480
Query: 481 TASK-----EDTGVVQVEQNNSKAEVEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAI 540
+SK E+T ++ EQ K E +E + K E D E+IAL AL EAFE +
Sbjct: 481 ESSKPGDASEETNEMEAEQKTPKLETAIE---ERCKDEAD-----ENIALKALTEAFEDV 540
Query: 541 GYGLTPDQHALSFADVGNPVMALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRH 600
G+ TP+ + SFAD+GNPVM LAAFL RL GSDVA ASA S+KS+ S L LATRH
Sbjct: 541 GHSSTPEA-SFSFADLGNPVMGLAAFLVRLAGSDVATASARASIKSLHSNSGML-LATRH 600
Query: 601 CFILEDPPGDKNAEANSESVVNVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNG 660
C+ILEDPP +K S+S + +A+ ND + + E+ +L++ + + +
Sbjct: 601 CYILEDPPDNKKDPTKSKS-CSADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDT 660
Query: 661 DSVTKETTMDNGNSSDAIGEHDSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIES 720
D+ KET D++ E + + T+ L ++E +K T
Sbjct: 661 DT-GKET-------QDSVSEEKQPGSRTENSTTKLDAVQEKRSSKPVTTD---------- 720
Query: 721 KLTTNPVEKLGEETSVEKPSDVHVHAEKTEIYNQVPSHSDKTSKELDDV---PNPLPSVN 780
+ EKP D+ PS + KEL + N L S N
Sbjct: 721 --------------NSEKPVDI-----------ICPSQDKCSGKELQEPLKDGNKLSSEN 780
Query: 781 -----DPQPMVAAD-SVIEASNDVALVPVSREKNEPEQT-----ETSKSVVDQGASKVSD 840
AAD S EAS DV + + + +PE E + ++GA+ V
Sbjct: 781 KDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTVGEKVQLAKEEGANDVLS 840
Query: 841 SLLSEENATPQPV----KPNSAVGGSDDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTL 900
+ +++ + QP+ P + G + N +++ +GT K + I+KLKRAA++ +
Sbjct: 841 T--PDKSVSQQPIGSASAPENGTAGGNPNIEGKKEKDICEGTKDKYN-IEKLKRAAISAI 900
Query: 901 SAAAVKAKVLANQEEDQIRQLSMILIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQR 960
SAAAVKAK LA QEEDQIRQLS LIEKQLHKLE+KL+ FNE +++TMRVREQL+RS+QR
Sbjct: 901 SAAAVKAKNLAKQEEDQIRQLSGSLIEKQLHKLEAKLSIFNEAESLTMRVREQLERSRQR 960
Query: 961 LFQERAQIIAARLGLPASASRGGAPTLPGNRMAMNLANSNPRPPMGMTPQRPPTSGPPGI 1005
L+ ERAQIIAARLG+P S S +LP NR+A N AN RPPMGM RPP PPG
Sbjct: 961 LYHERAQIIAARLGVPPSMS--SKASLPTNRIAANFANVAQRPPMGMAFPRPPMPRPPGF 985
BLAST of Sed0027635 vs. TAIR 10
Match:
AT4G34430.2 (DNA-binding family protein )
HSP 1 Score: 687.6 bits (1773), Expect = 1.5e-197
Identity = 488/1053 (46.34%), Postives = 632/1053 (60.02%), Query Frame = 0
Query: 1 MEEKRRD-AGNL--PANSTASPSSEP-PTSRRRGGAQKRKASALGGSN-SSSAPSKR-VT 60
MEEKRRD AG L +S SP+SEP P RRRGG KRKA+ALGGSN SSAPSKR +T
Sbjct: 1 MEEKRRDSAGTLAFAGSSGDSPASEPMPAPRRRGGGLKRKANALGGSNFFSSAPSKRMLT 60
Query: 61 RDKSAL-SHPPNHSGPFTRARLGPNNGAGTASANAAPGSVKAQGSEAQRGEALAAAAEEL 120
R+K+ L S P H+GP TRAR P+ A + A G++ ++ + EE
Sbjct: 61 REKAMLASFSPVHNGPLTRARQAPSIMPSAADGVKSEVLNVAVGADGEKPK----EEEER 120
Query: 121 NRASR-LANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSS 180
N+A R L+A EADFEA++SRD NVHVVPNHCGWFSW ++HP+EERS+ SFF+GK
Sbjct: 121 NKAIREWEALEAKIEADFEAIRSRDSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLE 180
Query: 181 TRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHPF 240
R+ VY EIRNWIM KFH+NP++QI KDL+ELEVG+ +A+QEV+EFLD+WGLINFHPF
Sbjct: 181 GRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPF 240
Query: 241 LPAKSTST-SDVEDENQKESLVEKLFHFETLESRPSVA--PKTNVTTAPPRLLRESAISE 300
P + ST SD +D KESL+ L+ F+ E+ P + P+ P L + ++
Sbjct: 241 PPTDTGSTASDHDDLGDKESLLNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAAD 300
Query: 301 EMVKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMES 360
E++K EGP+VEYHCNSCSADCSRKRYHC KQADFDLC+ECF SGKF S+MSS DFILME
Sbjct: 301 ELLKQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEP 360
Query: 361 AEVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLE 420
AE PG GKWTDQETLLLLEALE++KENWNEIAEHVATK+KAQC+LHF+QMPIED FL+
Sbjct: 361 AEAPGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLD 420
Query: 421 SENNVEVSAKETAVPPSIENDSSVPMDITESMDNK---------------TTGNEASKVE 480
+ + +K+T ++D+SV D E +NK GNE +
Sbjct: 421 QIDYKDPISKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQ 480
Query: 481 TASK-----EDTGVVQVEQNNSKAEVEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAI 540
+SK E+T ++ EQ K E +E + K E D E+IAL AL EAFE +
Sbjct: 481 ESSKPGDASEETNEMEAEQKTPKLETAIE---ERCKDEAD-----ENIALKALTEAFEDV 540
Query: 541 GYGLTPDQHALSFADVGNPVMALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRH 600
G+ TP+ + SFAD+GNPVM LAAFL RL GSDVA ASA S+KS+ S L LATRH
Sbjct: 541 GHSSTPEA-SFSFADLGNPVMGLAAFLVRLAGSDVATASARASIKSLHSNSGML-LATRH 600
Query: 601 CFILEDPPGDKNAEANSESVVNVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNG 660
C+ILEDPP +K S+S + +A+ ND + + E+ +L++ + + +
Sbjct: 601 CYILEDPPDNKKDPTKSKS-CSADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDT 660
Query: 661 DSVTKETTMDNGNSSDAIGEHDSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIES 720
D+ KET D++ E + + T+ L ++E +K T
Sbjct: 661 DT-GKET-------QDSVSEEKQPGSRTENSTTKLDAVQEKRSSKPVTTD---------- 720
Query: 721 KLTTNPVEKLGEETSVEKPSDVHVHAEKTEIYNQVPSHSDKTSKELDDV---PNPLPSVN 780
+ EKP D+ PS + KEL + N L S N
Sbjct: 721 --------------NSEKPVDI-----------ICPSQDKCSGKELQEPLKDGNKLSSEN 780
Query: 781 -----DPQPMVAAD-SVIEASNDVALVPVSREKNEPEQT-----ETSKSVVDQGASKVSD 840
AAD S EAS DV + + + +PE E + ++GA+ V
Sbjct: 781 KDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTVGEKVQLAKEEGANDVLS 840
Query: 841 SLLSEENATPQPV----KPNSAVGGSDDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTL 900
+ +++ + QP+ P + G + N +++ +GT K + I+KLKRAA++ +
Sbjct: 841 T--PDKSVSQQPIGSASAPENGTAGGNPNIEGKKEKDICEGTKDKYN-IEKLKRAAISAI 900
Query: 901 SAAAVKAKVLANQEEDQIRQLSMILIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQR 960
SAAAVKAK LA QEEDQIRQLS LIEKQLHKLE+KL+ FNE +++TMRVREQL+RS+QR
Sbjct: 901 SAAAVKAKNLAKQEEDQIRQLSGSLIEKQLHKLEAKLSIFNEAESLTMRVREQLERSRQR 960
Query: 961 LFQERAQIIAARLGLPASASRGGAPTLPGNRMAMNLANSNPRPPMGMTPQRPPTSGPPGI 1005
L+ ERAQIIAARLG+P S S +LP NR+A N AN RPPMGM RPP PPG
Sbjct: 961 LYHERAQIIAARLGVPPSMS--SKASLPTNRIAANFANVAQRPPMGMAFPRPPMPRPPGF 985
BLAST of Sed0027635 vs. TAIR 10
Match:
AT4G34430.3 (DNA-binding family protein )
HSP 1 Score: 686.8 bits (1771), Expect = 2.6e-197
Identity = 488/1053 (46.34%), Postives = 631/1053 (59.92%), Query Frame = 0
Query: 1 MEEKRRD-AGNL--PANSTASPSSEP-PTSRRRGGAQKRKASALGGSN-SSSAPSKR-VT 60
MEEKRRD AG L +S SP+SEP P RRRGG KRKA+ALGGSN SSAPSKR +T
Sbjct: 1 MEEKRRDSAGTLAFAGSSGDSPASEPMPAPRRRGGGLKRKANALGGSNFFSSAPSKRMLT 60
Query: 61 RDKSAL-SHPPNHSGPFTRARLGPNNGAGTASANAAPGSVKAQGSEAQRGEALAAAAEEL 120
R+K+ L S P H+GP TRAR P+ A + A G++ ++ + EE
Sbjct: 61 REKAMLASFSPVHNGPLTRARQAPSIMPSAADGVKSEVLNVAVGADGEKPK----EEEER 120
Query: 121 NRASR-LANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSS 180
N+A R L+A EADFEA++SRD NVHVVPNHCGWFSW ++HP+EERS+ SFF+GK
Sbjct: 121 NKAIREWEALEAKIEADFEAIRSRDSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLE 180
Query: 181 TRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHPF 240
R+ VY EIRNWIM KFH+NP++QI KDL+ELEVG+ +A+QEV+EFLD+WGLINFHPF
Sbjct: 181 GRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPF 240
Query: 241 LPAKSTST-SDVEDENQKESLVEKLFHFETLESRPSVA--PKTNVTTAPPRLLRESAISE 300
P + ST SD +D KESL+ L+ F+ E+ P + P+ P L + ++
Sbjct: 241 PPTDTGSTASDHDDLGDKESLLNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAAD 300
Query: 301 EMVKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMES 360
E++K EGP+VEYHCNSCSADCSRKRYHC KQADFDLC+ECF SGKF S+MSS DFILME
Sbjct: 301 ELLKQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEP 360
Query: 361 AEVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLE 420
AE PG GKWTDQETLLLLEALE++KENWNEIAEHVATK+KAQC+LHF+QMPIED FL+
Sbjct: 361 AEAPGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLD 420
Query: 421 SENNVEVSAKETAVPPSIENDSSVPMDITESMDNK---------------TTGNEASKVE 480
+ + +K+T ++D+SV D E +NK GNE +
Sbjct: 421 QIDYKDPISKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQ 480
Query: 481 TASK-----EDTGVVQVEQNNSKAEVEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAI 540
+SK E+T ++ EQ K E +E + K E D E+IAL AL EAFE +
Sbjct: 481 ESSKPGDASEETNEMEAEQKTPKLETAIE---ERCKDEAD-----ENIALKALTEAFEDV 540
Query: 541 GYGLTPDQHALSFADVGNPVMALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRH 600
G+ TP+ + SFAD+GNPVM LAAFL RL GSDVA ASA S+KS+ S L LATRH
Sbjct: 541 GHSSTPEA-SFSFADLGNPVMGLAAFLVRLAGSDVATASARASIKSLHSNSGML-LATRH 600
Query: 601 CFILEDPPGDKNAEANSESVVNVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNG 660
C+ILEDPP +K S+S +A+ ND + + E+ +L++ + + +
Sbjct: 601 CYILEDPPDNKKDPTKSKS---ADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDT 660
Query: 661 DSVTKETTMDNGNSSDAIGEHDSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIES 720
D+ KET D++ E + + T+ L ++E +K T
Sbjct: 661 DT-GKET-------QDSVSEEKQPGSRTENSTTKLDAVQEKRSSKPVTTD---------- 720
Query: 721 KLTTNPVEKLGEETSVEKPSDVHVHAEKTEIYNQVPSHSDKTSKELDDV---PNPLPSVN 780
+ EKP D+ PS + KEL + N L S N
Sbjct: 721 --------------NSEKPVDI-----------ICPSQDKCSGKELQEPLKDGNKLSSEN 780
Query: 781 -----DPQPMVAAD-SVIEASNDVALVPVSREKNEPEQT-----ETSKSVVDQGASKVSD 840
AAD S EAS DV + + + +PE E + ++GA+ V
Sbjct: 781 KDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTVGEKVQLAKEEGANDVLS 840
Query: 841 SLLSEENATPQPV----KPNSAVGGSDDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTL 900
+ +++ + QP+ P + G + N +++ +GT K + I+KLKRAA++ +
Sbjct: 841 T--PDKSVSQQPIGSASAPENGTAGGNPNIEGKKEKDICEGTKDKYN-IEKLKRAAISAI 900
Query: 901 SAAAVKAKVLANQEEDQIRQLSMILIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQR 960
SAAAVKAK LA QEEDQIRQLS LIEKQLHKLE+KL+ FNE +++TMRVREQL+RS+QR
Sbjct: 901 SAAAVKAKNLAKQEEDQIRQLSGSLIEKQLHKLEAKLSIFNEAESLTMRVREQLERSRQR 960
Query: 961 LFQERAQIIAARLGLPASASRGGAPTLPGNRMAMNLANSNPRPPMGMTPQRPPTSGPPGI 1005
L+ ERAQIIAARLG+P S S +LP NR+A N AN RPPMGM RPP PPG
Sbjct: 961 LYHERAQIIAARLGVPPSMS--SKASLPTNRIAANFANVAQRPPMGMAFPRPPMPRPPGF 983
BLAST of Sed0027635 vs. TAIR 10
Match:
AT4G34430.4 (DNA-binding family protein )
HSP 1 Score: 682.9 bits (1761), Expect = 3.8e-196
Identity = 488/1054 (46.30%), Postives = 632/1054 (59.96%), Query Frame = 0
Query: 1 MEEKRRD-AGNL--PANSTASPSSEP-PTSRRRGGAQKRKASALGGSN-SSSAPSKR-VT 60
MEEKRRD AG L +S SP+SEP P RRRGG KRKA+ALGGSN SSAPSKR +T
Sbjct: 1 MEEKRRDSAGTLAFAGSSGDSPASEPMPAPRRRGGGLKRKANALGGSNFFSSAPSKRMLT 60
Query: 61 RDKSAL-SHPPNHSGPFTRARLGPNNGAGTASANAAPGSVKAQGSEAQRGEALAAAAEEL 120
R+K+ L S P H+GP TRAR P+ A + A G++ ++ + EE
Sbjct: 61 REKAMLASFSPVHNGPLTRARQAPSIMPSAADGVKSEVLNVAVGADGEKPK----EEEER 120
Query: 121 NRASR-LANLDASFEADFEAVKSRDVNVHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSS 180
N+A R L+A EADFEA++SRD NVHVVPNHCGWFSW ++HP+EERS+ SFF+GK
Sbjct: 121 NKAIREWEALEAKIEADFEAIRSRDSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLE 180
Query: 181 TRSPVVYIEIRNWIMKKFHTNPSVQIVSKDLSELEVGELDARQEVLEFLDHWGLINFHPF 240
R+ VY EIRNWIM KFH+NP++QI KDL+ELEVG+ +A+QEV+EFLD+WGLINFHPF
Sbjct: 181 GRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPF 240
Query: 241 LPAKSTST-SDVEDENQKESLVEKLFHFETLESRPSVA--PKTNVTTAPPRLLRESAISE 300
P + ST SD +D KESL+ L+ F+ E+ P + P+ P L + ++
Sbjct: 241 PPTDTGSTASDHDDLGDKESLLNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAAD 300
Query: 301 EMVKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMES 360
E++K EGP+VEYHCNSCSADCSRKRYHC KQADFDLC+ECF SGKF S+MSS DFILME
Sbjct: 301 ELLKQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEP 360
Query: 361 AEVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLE 420
AE PG GKWTDQETLLLLEALE++KENWNEIAEHVATK+KAQC+LHF+QMPIED FL+
Sbjct: 361 AEAPGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLD 420
Query: 421 SENNVEVSAKETAVPPSIENDSSVPMDITESMDNK---------------TTGNEASKVE 480
+ + +K+T ++D+SV D E +NK GNE +
Sbjct: 421 QIDYKDPISKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQ 480
Query: 481 TASK-----EDTGVVQVEQNNSKAEVEVEAALDNFKPEDDGQKVSEDIALNALKEAFEAI 540
+SK E+T ++ EQ K E +E + K E D E+IAL AL EAFE +
Sbjct: 481 ESSKPGDASEETNEMEAEQKTPKLETAIE---ERCKDEAD-----ENIALKALTEAFEDV 540
Query: 541 GYGLTPDQHALSFADVGNPVMALAAFLARLVGSDVACASAHFSLKSMSQKSSSLDLATRH 600
G+ TP+ + SFAD+GNPVM LAAFL RL GSDVA ASA S+KS+ S L LATRH
Sbjct: 541 GHSSTPEA-SFSFADLGNPVMGLAAFLVRLAGSDVATASARASIKSLHSNSGML-LATRH 600
Query: 601 CFILEDPPGDKNAEANSESVVNVEAQKNDSEQCAKQRQGNSTSVFEDKTLSTTNCNIKNG 660
C+ILEDPP +K S+S + +A+ ND + + E+ +L++ + + +
Sbjct: 601 CYILEDPPDNKKDPTKSKS-CSADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDT 660
Query: 661 DSVTKETTMDNGNSSDAIGEHDSIVNHGPDGTSNLKELREPELAKDERTSIVNEPENIES 720
D+ KET D++ E + + T+ L ++E +K T
Sbjct: 661 DT-GKET-------QDSVSEEKQPGSRTENSTTKLDAVQEKRSSKPVTTD---------- 720
Query: 721 KLTTNPVEKLGEETSVEKPSDVHVHAEKTEIYNQVPSHSDKTSKELDDV---PNPLPSVN 780
+ EKP D+ PS + KEL + N L S N
Sbjct: 721 --------------NSEKPVDI-----------ICPSQDKCSGKELQEPLKDGNKLSSEN 780
Query: 781 -----DPQPMVAAD-SVIEASNDVALVPVSREKNEPEQT-----ETSKSVVDQGASKVSD 840
AAD S EAS DV + + + +PE E + ++GA+ V
Sbjct: 781 KDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTVGEKVQLAKEEGANDVLS 840
Query: 841 SLLSEENATPQPV----KPNSAVGGSDDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTL 900
+ +++ + QP+ P + G + N +++ +GT K + I+KLKRAA++ +
Sbjct: 841 T--PDKSVSQQPIGSASAPENGTAGGNPNIEGKKEKDICEGTKDKYN-IEKLKRAAISAI 900
Query: 901 SAAAVKAKVLANQEEDQIRQLSMILIEK-QLHKLESKLAFFNEMDNVTMRVREQLDRSKQ 960
SAAAVKAK LA QEEDQIRQLS LIEK QLHKLE+KL+ FNE +++TMRVREQL+RS+Q
Sbjct: 901 SAAAVKAKNLAKQEEDQIRQLSGSLIEKQQLHKLEAKLSIFNEAESLTMRVREQLERSRQ 960
Query: 961 RLFQERAQIIAARLGLPASASRGGAPTLPGNRMAMNLANSNPRPPMGMTPQRPPTSGPPG 1005
RL+ ERAQIIAARLG+P S S +LP NR+A N AN RPPMGM RPP PPG
Sbjct: 961 RLYHERAQIIAARLGVPPSMS--SKASLPTNRIAANFANVAQRPPMGMAFPRPPMPRPPG 986
BLAST of Sed0027635 vs. TAIR 10
Match:
AT1G21700.1 (SWITCH/sucrose nonfermenting 3C )
HSP 1 Score: 167.2 bits (422), Expect = 7.0e-41
Identity = 153/533 (28.71%), Postives = 225/533 (42.21%), Query Frame = 0
Query: 140 VHVVPNHCGWFSWTEVHPIEERSVSSFFSGKSSTRSPVVYIEIRNWIMKKFHTNPSVQIV 199
VHV+P H WF+ V +E + V FFSGKS +P Y+E RN I+ K+ NP +
Sbjct: 175 VHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLT 234
Query: 200 SKDLSELEVG-ELDARQEVLEFLDHWGLINFHPFL---PAKSTSTSDVEDENQKE----- 259
D L G +++ V FLDHWG+IN+ P SDV ++ E
Sbjct: 235 ISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPS 294
Query: 260 ---SLVEKLFHFETLESRPSVAPK-TNVTTAPPRLLRESAISEEMVKPEGPSVEYHCNSC 319
+ ++ L F+ +P+ K V ++ P L +S + ++ + HCN C
Sbjct: 295 AALTSIDSLIKFD----KPNCRHKGGEVYSSLPSLDGDSPDLDIRIREH--LCDSHCNHC 354
Query: 320 SADCSRKRYHCQKQADFDLCSECFTSGKFDSNMSSPDFILMESAEVPG-ASGGKWTDQET 379
S + QK+ D LC +CF G+F S DF+ ++ + G G WTDQET
Sbjct: 355 SRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQET 414
Query: 380 LLLLEALELYKENWNEIAEHVATKSKAQCILHFIQMPIEDTFLESENNVEVSAKETAVPP 439
LLLLEA+ELY ENW +IA+HV +KSKAQCILHF+++P+ED L+ NVEVS P
Sbjct: 415 LLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLD---NVEVSGVTNTENP 474
Query: 440 SIENDSSVPMDITESMDNKTTGNEASKVETASKEDTGVVQVEQNNSKAEVEVEAALDNFK 499
T D+K T + + + S E++
Sbjct: 475 ------------TNGYDHKGTDSNGD-----------LPGYSEQGSDTEIK--------- 534
Query: 500 PEDDGQKVSEDIALNALKEAFEAIGYGLTPDQHALSFADVGNPVMALAAFLARLVGSDVA 559
L F NPVMAL AFLA VG VA
Sbjct: 535 ----------------------------------LPFVKSPNPVMALVAFLASAVGPRVA 594
Query: 560 CASAHFSLKSMSQKSSSLDLATRHCFILEDPPGDKNAEANSESVVNVEAQKNDSEQCAKQ 619
+ AH SL +S+ +D + + S+++ E Q+ D
Sbjct: 595 ASCAHESLSVLSE---------------DDRMKSEGMQGKEASLLDGENQQQDGAHKTSS 615
Query: 620 RQG--NSTSVFEDKTLSTTNCNIKNGDSVTKETTMDNGNSSDAIGEHDSIVNH 657
+ G T + +DK ++ + + TK + + +IVNH
Sbjct: 655 QNGAEAQTPLPQDKVMAAFRAGL--SAAATKAKLFADHEEREIQRLSANIVNH 615
HSP 2 Score: 49.7 bits (117), Expect = 1.6e-05
Identity = 68/253 (26.88%), Postives = 115/253 (45.45%), Query Frame = 0
Query: 732 SKELDDVPNPLPSVNDPQPMVAADSVIEASNDVALVPVSREKNEPEQTETSKSVVDQGAS 791
S++ D LP V P P++A + + ++ + ++ +E + + +G
Sbjct: 484 SEQGSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLSVLSEDDR-MKSEGMQ 543
Query: 792 KVSDSLLSEENATPQPVKPNSAVGGSDDNQSKDNKEESSKGTSKKEDKIDKLKRAAVTTL 851
SLL EN S+ G++ T +DK+ RA L
Sbjct: 544 GKEASLLDGENQQQDGAHKTSSQNGAEAQ------------TPLPQDKVMAAFRAG---L 603
Query: 852 SAAAVKAKVLANQEEDQIRQLSMILIEKQLHKLESKLAFFNEMDNVTMRVREQLDRSKQR 911
SAAA KAK+ A+ EE +I++LS ++ QL ++E KL F E++ + M+ EQ+++++QR
Sbjct: 604 SAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQR 663
Query: 912 LFQERAQIIAARLGLPASASRGGAPTLPGNRMAMNLAN-----SNPRPPMGMTPQRPPTS 971
ERA++++AR G P GG N M+L+ ++ Q TS
Sbjct: 664 FSAERARMLSARFGSP-----GGISPQTNNLQGMSLSTGGNNINSLMHQQHQQQQASATS 715
Query: 972 GPPGIAATNPNPQ 980
P I + NPQ
Sbjct: 724 QPSIIPGFSNNPQ 715
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022135773.1 | 0.0e+00 | 80.12 | SWI/SNF complex subunit SWI3D [Momordica charantia] | [more] |
XP_038887838.1 | 0.0e+00 | 79.40 | SWI/SNF complex subunit SWI3D [Benincasa hispida] | [more] |
KAG6572029.1 | 0.0e+00 | 78.72 | SWI/SNF complex subunit SWI3D, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_022952326.1 | 0.0e+00 | 78.54 | SWI/SNF complex subunit SWI3D-like isoform X1 [Cucurbita moschata] | [more] |
XP_022931284.1 | 0.0e+00 | 81.01 | SWI/SNF complex subunit SWI3D-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q8VY05 | 2.2e-196 | 46.34 | SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana OX=3702 GN=SWI3D PE=1 SV=3 | [more] |
Q9XI07 | 9.8e-40 | 28.71 | SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana OX=3702 GN=SWI3C PE=1 SV=1 | [more] |
O14470 | 4.6e-37 | 28.21 | SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 ... | [more] |
Q53KK6 | 7.3e-35 | 28.49 | SWI/SNF complex subunit SWI3C homolog OS=Oryza sativa subsp. japonica OX=39947 G... | [more] |
Q6PDG5 | 5.8e-24 | 23.04 | SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C5U7 | 0.0e+00 | 80.12 | SWI/SNF complex subunit SWI3D OS=Momordica charantia OX=3673 GN=LOC111007653 PE=... | [more] |
A0A6J1GJX9 | 0.0e+00 | 78.54 | SWI/SNF complex subunit SWI3D-like isoform X1 OS=Cucurbita moschata OX=3662 GN=L... | [more] |
A0A6J1ETV7 | 0.0e+00 | 81.01 | SWI/SNF complex subunit SWI3D-like OS=Cucurbita moschata OX=3662 GN=LOC111437510... | [more] |
A0A6J1GK40 | 0.0e+00 | 78.62 | SWI/SNF complex subunit SWI3D-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L... | [more] |
A0A6J1I4Y3 | 0.0e+00 | 78.06 | SWI/SNF complex subunit SWI3D isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11147... | [more] |