Sed0027176 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAACCGACCAAGCTTCTTCTGATAAGATAAACTTGGAGTCCATTTTGGTTTCCATTGATGAGTTCTTCAGTAGATACCCTTTTTTGTAGCTGGGTGTACTTTCATTTGGCTTGTTGGGGTGCCCTTGATTGAGTACTTCCTTTTCAGGAAGTTCAAGTTCGTTTCTGCCATTGATGGGTTTCGCAAGATCCGGGCCGACCCGAATGCTCAGCTCTTGGATGTTAGGGATGAGAAGAGTTTGGGGATTTTGGGGGCTCCTAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGCTTATTCTGAGGAGGATGAAGATGGGTTTGTGAAGAAGGTGAAAAAATGCTTTGGAGATGGTGGTGATACTCTGGTTTTAGTAAGTTTGTTGCCATTTACTTCATATGGAAACTTGGAAATGAAAATGGATTTGTGTGAGTTATTTGGATAATGGAAATTTATGAAAAATTCAAATTTTTTTATCTTGGGTTTTGGTTACTGTATTGTGATAAAATGGCCTGAGCTTAGGATAACTTTTAAGAATGAAACTTGGGATGAGTTTTGAGAATATTGCTTTTGAGTGTATTTTGAGTTTTGTTGACAACCAAATATTGTCAAATATAATAGAGGCAGAAAATAGCATTCTGCTAAGTTTTCCTTGACTTATGTAGTTTTTTTTTAAAATTTAAATGAGAAAATAAATTTCATTGAGAGAAAAAAAAAGTATAAACGAAAACCTTGACAACCAAATATAAAGTATAGTCGAGATGCTCGCTTGAACACTTACTGATATTAAAAGTACTAAAGAAACATGTGGGCATACAGAAAGAATCCCCAACAAGAGAAGATGATGATTTTTCGTTGGATTTAAATGAGCTTGACTTCTGTTGTCAAACAAACTCATTGAATAGATACTTGCGATCATACACTGCTAGTTGGAAATTTTCGTGTATCGAATCATGTCAAACGGTTTTCTTACTTAGCTAGTACTGCCTAGATTAAACAGAAGGCTCCAAGTTTTCTTGCGGATTATATGTGTTCGATTTCATCATGTGTTGTGCTTTTGATGTGTAAGGTAGTTTTGATGGTAATTCCATGAAAGTGGCTGAGTTGTTGTTCAAGAACGGCTTCAAGGAGGCTTATGCAATCAAGGATGGAGTTAGGGGCCAAAAAGGGTGGTTGGTATGCATCCTACTATGATACTCGTATATTGACGTCGTCGTAAATTTTGTTTTCTCTTCTGATAACCGTGTGACTAAGAAGGAAAAAGATGGCATGTCCAAAATCTAAGATCATCATCATCCTTATTCTCTTCTAAATCTAATATGGTTTGGATCCATATGATTTTCTTTCTTTGACAGGTAATAACTTTGGCAATAATTAAAGCCAAAAAATCAAACTTAAAGAAACAAAACAAAACAACAGAGAGAACTGAAACACAAACCATCTAACTACATTAAGCTCAAAATAGAACAAACCATCTAGAATATTTTCAACTTTGAATTTTCTTAAAACTTAATCGACGGACATTAATAAATTGATTCCAGTTGGTATCATCAATTTTCCAGAGTTTTTTCATTTATACTATACTATATATCTCTATATATGCCCATAATTACTATGGTGAAAAAAGTCATTTTCTTTTCTTTCTCCTCAATCTAGGCCAGCTTGCGTGCCACTTTGACTAATGTCACGGGCTATATCGCTTAACCTTACAACATTTGGATGTCAAGGAAATTTGTAAGAAATTAATTTCTAGGTAGATGGTTACTATGAATTGAACTTGTCACCTCTTAGCTTTCCAAGTTCCTCTTTGAACACTGGGGCCACTCCATAATGGTTCGTACGTACCGTCTCTTAGTTTTAGGTATATGCCAATTGCCATTGCGCTAAGCTCACTTTGGCGACTCTTCCATTTTCTTTTTTAACTATTTTTATTGTATTGTTTGCAGGCAATACAGGAAAACCTATTACCACCTTCTGTCCACATGATCAAGAGGAAAAAAGCTAAAGCTTCCCAAAAGTTTGGGACCAATGGAGGAGTTGTCCAACAAAATAGAGACAGTGAGGCTGTTCCATTTTCGAAATCCTCCAGTGGAGAAGCCCAAGCATCACGCCTCCATGTCGATGCATCATCAGACACCGAGCCACAGTTGAAAACCCGGTTGAGATCATCGTCTCCTTATCCAAATGTAAGTTCACTCTGGAAACTGATATATCTTTAAGGTGAATTTATTTATCACTTTATAGTAGCTGAAAGATTCGATATTAACACTTTATAACACTCAAAACCCTTTGAAGTGCCCCCAAGGAGTCGCCTAATCAGTGATTTCCCTTAAGCTGCTTGTATAGTGTTTCATCAAAAAAATTATCTAAAAGTTGAAACTATATTATGTATAATGTTGTCCCTGTCATGATAGTTCTTGTATTTACTTTGATTGGGTATTTTCTGTGCATGTGGTGTACAGACTGACTCTTTAACACTGATATATGACAGTACCCAGATTTGAAACCACCATCTACTCCAACTCCCTCAAAGCCAGGGAAATGA ATGGAAACCGACCAAGCTTCTTCTGATAAGATAAACTTGGAGTCCATTTTGGTTTCCATTGATGAGTTCTTCACTGGGTGTACTTTCATTTGGCTTGTTGGGGTGCCCTTGATTGAGTACTTCCTTTTCAGGAAGTTCAAGTTCGTTTCTGCCATTGATGGGTTTCGCAAGATCCGGGCCGACCCGAATGCTCAGCTCTTGGATGTTAGGGATGAGAAGAGTTTGGGGATTTTGGGGGCTCCTAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGCTTATTCTGAGGAGGATGAAGATGGGTTTGTGAAGAAGGTGAAAAAATGCTTTGGAGATGGTGGTGATACTCTGGTTTTAGTAAGTTTTTTTGATGGTAATTCCATGAAAGTGGCTGAGTTGTTGTTCAAGAACGGCTTCAAGGAGGCTTATGCAATCAAGGATGGAGTTAGGGGCCAAAAAGGGTGGTTGGCAATACAGGAAAACCTATTACCACCTTCTGTCCACATGATCAAGAGGAAAAAAGCTAAAGCTTCCCAAAAGTTTGGGACCAATGGAGGAGTTGTCCAACAAAATAGAGACAGTGAGGCTGTTCCATTTTCGAAATCCTCCAGTGGAGAAGCCCAAGCATCACGCCTCCATGTCGATGCATCATCAGACACCGAGCCACAGTTGAAAACCCGGTTGAGATCATCGTCTCCTTATCCAAATTACCCAGATTTGAAACCACCATCTACTCCAACTCCCTCAAAGCCAGGGAAATGA ATGGAAACCGACCAAGCTTCTTCTGATAAGATAAACTTGGAGTCCATTTTGGTTTCCATTGATGAGTTCTTCACTGGGTGTACTTTCATTTGGCTTGTTGGGGTGCCCTTGATTGAGTACTTCCTTTTCAGGAAGTTCAAGTTCGTTTCTGCCATTGATGGGTTTCGCAAGATCCGGGCCGACCCGAATGCTCAGCTCTTGGATGTTAGGGATGAGAAGAGTTTGGGGATTTTGGGGGCTCCTAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGCTTATTCTGAGGAGGATGAAGATGGGTTTGTGAAGAAGGTGAAAAAATGCTTTGGAGATGGTGGTGATACTCTGGTTTTAGTAAGTTTTTTTGATGGTAATTCCATGAAAGTGGCTGAGTTGTTGTTCAAGAACGGCTTCAAGGAGGCTTATGCAATCAAGGATGGAGTTAGGGGCCAAAAAGGGTGGTTGGCAATACAGGAAAACCTATTACCACCTTCTGTCCACATGATCAAGAGGAAAAAAGCTAAAGCTTCCCAAAAGTTTGGGACCAATGGAGGAGTTGTCCAACAAAATAGAGACAGTGAGGCTGTTCCATTTTCGAAATCCTCCAGTGGAGAAGCCCAAGCATCACGCCTCCATGTCGATGCATCATCAGACACCGAGCCACAGTTGAAAACCCGGTTGAGATCATCGTCTCCTTATCCAAATTACCCAGATTTGAAACCACCATCTACTCCAACTCCCTCAAAGCCAGGGAAATGA METDQASSDKINLESILVSIDEFFTGCTFIWLVGVPLIEYFLFRKFKFVSAIDGFRKIRADPNAQLLDVRDEKSLGILGAPNLRILNKDVVQVAYSEEDEDGFVKKVKKCFGDGGDTLVLVSFFDGNSMKVAELLFKNGFKEAYAIKDGVRGQKGWLAIQENLLPPSVHMIKRKKAKASQKFGTNGGVVQQNRDSEAVPFSKSSSGEAQASRLHVDASSDTEPQLKTRLRSSSPYPNYPDLKPPSTPTPSKPGK Homology
BLAST of Sed0027176 vs. NCBI nr
Match: KAG7014541.1 (Rhodanese-like domain-containing protein 4A, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 396.7 bits (1018), Expect = 1.5e-106 Identity = 207/260 (79.62%), Postives = 228/260 (87.69%), Query Frame = 0
BLAST of Sed0027176 vs. NCBI nr
Match: XP_038896412.1 (rhodanese-like domain-containing protein 4A, chloroplastic [Benincasa hispida]) HSP 1 Score: 395.2 bits (1014), Expect = 4.3e-106 Identity = 208/262 (79.39%), Postives = 227/262 (86.64%), Query Frame = 0
BLAST of Sed0027176 vs. NCBI nr
Match: XP_022991517.1 (rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita maxima]) HSP 1 Score: 395.2 bits (1014), Expect = 4.3e-106 Identity = 207/260 (79.62%), Postives = 227/260 (87.31%), Query Frame = 0
BLAST of Sed0027176 vs. NCBI nr
Match: XP_022954032.1 (rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita moschata]) HSP 1 Score: 392.9 bits (1008), Expect = 2.1e-105 Identity = 205/260 (78.85%), Postives = 227/260 (87.31%), Query Frame = 0
BLAST of Sed0027176 vs. NCBI nr
Match: KAG6576020.1 (Rhodanese-like domain-containing protein 4A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 392.5 bits (1007), Expect = 2.8e-105 Identity = 207/263 (78.71%), Postives = 228/263 (86.69%), Query Frame = 0
BLAST of Sed0027176 vs. ExPASy Swiss-Prot
Match: Q56XR7 (Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR4A PE=2 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.6e-47 Identity = 101/181 (55.80%), Postives = 129/181 (71.27%), Query Frame = 0
BLAST of Sed0027176 vs. ExPASy Swiss-Prot
Match: Q9M158 (Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR4 PE=1 SV=2) HSP 1 Score: 97.8 bits (242), Expect = 1.8e-19 Identity = 77/236 (32.63%), Postives = 114/236 (48.31%), Query Frame = 0
HSP 2 Score: 37.7 bits (86), Expect = 2.3e-01 Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 0
BLAST of Sed0027176 vs. ExPASy Swiss-Prot
Match: A2X345 (Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=TROL PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.8e-19 Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 0
HSP 2 Score: 38.9 bits (89), Expect = 1.0e-01 Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of Sed0027176 vs. ExPASy Swiss-Prot
Match: Q6ETQ7 (Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TROL PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.8e-19 Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 0
HSP 2 Score: 38.9 bits (89), Expect = 1.0e-01 Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of Sed0027176 vs. ExPASy TrEMBL
Match: A0A6J1JM16 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488109 PE=4 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 2.1e-106 Identity = 207/260 (79.62%), Postives = 227/260 (87.31%), Query Frame = 0
BLAST of Sed0027176 vs. ExPASy TrEMBL
Match: A0A6J1GPW4 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456414 PE=4 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 1.0e-105 Identity = 205/260 (78.85%), Postives = 227/260 (87.31%), Query Frame = 0
BLAST of Sed0027176 vs. ExPASy TrEMBL
Match: A0A5D3B9W6 (Rhodanese-like domain-containing protein 4A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00060 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 2.9e-100 Identity = 199/261 (76.25%), Postives = 220/261 (84.29%), Query Frame = 0
BLAST of Sed0027176 vs. ExPASy TrEMBL
Match: A0A1S3C7N8 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497630 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 2.9e-100 Identity = 199/261 (76.25%), Postives = 220/261 (84.29%), Query Frame = 0
BLAST of Sed0027176 vs. ExPASy TrEMBL
Match: A0A6J1DZ92 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025650 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 4.2e-99 Identity = 202/262 (77.10%), Postives = 223/262 (85.11%), Query Frame = 0
BLAST of Sed0027176 vs. TAIR 10
Match: AT3G25480.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 191.0 bits (484), Expect = 1.1e-48 Identity = 101/181 (55.80%), Postives = 129/181 (71.27%), Query Frame = 0
BLAST of Sed0027176 vs. TAIR 10
Match: AT4G01050.1 (thylakoid rhodanese-like ) HSP 1 Score: 97.8 bits (242), Expect = 1.3e-20 Identity = 77/236 (32.63%), Postives = 114/236 (48.31%), Query Frame = 0
HSP 2 Score: 37.7 bits (86), Expect = 1.6e-02 Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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