Sed0027151 (gene) Chayote v1

Overview


Name	Sed0027151
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	LG06: 35380465 .. 35381259 (+)
RNA-Seq Expression	Sed0027151
Synteny	Sed0027151

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCATGACTCTTTCATCTCCCTTCATTGGAAAAGCTGTTCCTTTGAATGCACCGACCGAGCTGGCCCCCGCGGTTCGTAGCAATGGGAGAGTCTCAATGAGGAAATCTGGCAAGCCGGCATCTTCAGGCAGCCCATGGTATGGTCCCGACCGTGTTAAGTACCTTGGACCATTCTCTGGTGAGCCTCCATCTTACCTTACAGGAGAGTTCCCCGGTGACTATGGTTGGGATACCGCAGGTCTATCAGCCGACCCTGAGACCTTTTCTAAGAACCGAGAGCTTGAAGTGATTCACAGTAGATGGGCCATGCTTGGAGCTCTAGGATGTGTGTTCCCAGAGCTACTTTCCAGGAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTCGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAAAGCATTTTGGCCATTTGGGCAAGTCAAGTAGTTCTCATGGGTGCAGTTGAAGGTTATCGTATTGCCGGAGGACCTCTTGGAGAAATTACCGATCCCATCTACCCAGGCGGTAGCTTTGACCCACTCGGGCTGGCCGACGATCCAGAGGCATTTGCAGAGCTCAAGGTGAAAGAACTCAAGAACGGCCGTCTTGCAATGTTTTCCATGTTTGGGTTCTTCGTGCAGGCCATTGTTACAGGAAAAGGTCCTTTGGAGAACCTTGCTGATCATCTTGCTGATCCTGTCAACAACAATGCGTGGTCTTATGCTACCAACTTTGTACCTGGGAAGTGA

mRNA sequence

ATGGCAGCCATGACTCTTTCATCTCCCTTCATTGGAAAAGCTGTTCCTTTGAATGCACCGACCGAGCTGGCCCCCGCGGTTCGCAGCCCATGGTATGGTCCCGACCGTGTTAAGTACCTTGGACCATTCTCTGGTGAGCCTCCATCTTACCTTACAGGAGAGTTCCCCGGTGACTATGGTTGGGATACCGCAGGTCTATCAGCCGACCCTGAGACCTTTTCTAAGAACCGAGAGCTTGAAGTGATTCACAGTAGATGGGCCATGCTTGGAGCTCTAGGATGTGTGTTCCCAGAGCTACTTTCCAGGAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTCGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAAAGCATTTTGGCCATTTGGGCAAGTCAAGTAGTTCTCATGGGTGCAGTTGAAGGTTATCGTATTGCCGGAGGACCTCTTGGAGAAATTACCGATCCCATCTACCCAGGCGGTAGCTTTGACCCACTCGGGCTGGCCGACGATCCAGAGGCATTTGCAGAGCTCAAGGTGAAAGAACTCAAGAACGGCCGTCTTGCAATGTTTTCCATGTTTGGGTTCTTCGTGCAGGCCATTGTTACAGGAAAAGGTCCTTTGGAGAACCTTGCTGATCATCTTGCTGATCCTGTCAACAACAATGCGTGGTCTTATGCTACCAACTTTGTACCTGGGAAGTGA

Coding sequence (CDS)

ATGGCAGCCATGACTCTTTCATCTCCCTTCATTGGAAAAGCTGTTCCTTTGAATGCACCGACCGAGCTGGCCCCCGCGGTTCGCAGCCCATGGTATGGTCCCGACCGTGTTAAGTACCTTGGACCATTCTCTGGTGAGCCTCCATCTTACCTTACAGGAGAGTTCCCCGGTGACTATGGTTGGGATACCGCAGGTCTATCAGCCGACCCTGAGACCTTTTCTAAGAACCGAGAGCTTGAAGTGATTCACAGTAGATGGGCCATGCTTGGAGCTCTAGGATGTGTGTTCCCAGAGCTACTTTCCAGGAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTCGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAAAGCATTTTGGCCATTTGGGCAAGTCAAGTAGTTCTCATGGGTGCAGTTGAAGGTTATCGTATTGCCGGAGGACCTCTTGGAGAAATTACCGATCCCATCTACCCAGGCGGTAGCTTTGACCCACTCGGGCTGGCCGACGATCCAGAGGCATTTGCAGAGCTCAAGGTGAAAGAACTCAAGAACGGCCGTCTTGCAATGTTTTCCATGTTTGGGTTCTTCGTGCAGGCCATTGTTACAGGAAAAGGTCCTTTGGAGAACCTTGCTGATCATCTTGCTGATCCTGTCAACAACAATGCGTGGTCTTATGCTACCAACTTTGTACCTGGGAAGTGA

Protein sequence

MAAMTLSSPFIGKAVPLNAPTELAPAVRSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

Homology

[Close]

BLAST of Sed0027151 vs. NCBI nr
Match: XP_038903667.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 488.8 bits (1257), Expect = 2.8e-134
Identity = 237/265 (89.43%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 1   MAAMTLSSPFIGKAVPLNAPTELAPAVR------------------SPWYGPDRVKYLGP 60
           MAAM LSS F GKAVPLNAPTEL+ +VR                  SPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 248
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0027151 vs. NCBI nr
Match: XP_022998479.1 (chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima])

HSP 1 Score: 486.1 bits (1250), Expect = 1.8e-133
Identity = 237/265 (89.43%), Postives = 241/265 (90.94%), Query Frame = 0


Query: 1   MAAMTLSSPFIGKAVPLNAPTELAPAVR------------------SPWYGPDRVKYLGP 60
           MAAM LSS F GKAVPLNAPTEL  +VR                  SPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA Q+VLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQIVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 248
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0027151 vs. NCBI nr
Match: XP_022948926.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_023524829.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita pepo subsp. pepo] >KAG6606914.1 Chlorophyll a-b binding protein 3C, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 485.3 bits (1248), Expect = 3.0e-133
Identity = 237/265 (89.43%), Postives = 241/265 (90.94%), Query Frame = 0


Query: 1   MAAMTLSSPFIGKAVPLNAPTELAPAVR------------------SPWYGPDRVKYLGP 60
           MAAM LSS F GKAVPLNAPTEL  +VR                  SPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 248
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0027151 vs. NCBI nr
Match: XP_008447450.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0038103.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK20505.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 483.4 bits (1243), Expect = 1.2e-132
Identity = 235/265 (88.68%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 1   MAAMTLSSPFIGKAVPLNAPTELAPAVR------------------SPWYGPDRVKYLGP 60
           MAAM LSS F GK VPLNAPTEL+ +VR                  SPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYL GEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 248
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0027151 vs. NCBI nr
Match: XP_022983188.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima])

HSP 1 Score: 481.1 bits (1237), Expect = 5.7e-132
Identity = 232/265 (87.55%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 1   MAAMTLSSPFIGKAVPLNAPTELAPAVR------------------SPWYGPDRVKYLGP 60
           MA M LSS F GKA+PLNAPTEL+ +VR                  SPWYGPDRVKYLGP
Sbjct: 1   MATMALSSTFTGKAIPLNAPTELSSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYL GEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  LSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 248
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0027151 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 2.3e-128
Identity = 225/259 (86.87%), Postives = 237/259 (91.51%), Query Frame = 0


Query: 2   AAMTLSSPFI-GKAVPL--NAPTELAPAVR----------SPWYGPDRVKYLGPFSGEPP 61
           ++M LSSP + GKAV L  +AP     ++R          SPWYGPDRVKYLGPFSGEPP
Sbjct: 5   SSMALSSPSLAGKAVKLGPSAPEVGRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPP 64

Query: 62  SYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 121
           SYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG
Sbjct: 65  SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 124

Query: 122 EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITD 181
           EAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYRIAGGPLGE+TD
Sbjct: 125 EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTD 184

Query: 182 PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 241
           PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL
Sbjct: 185 PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 244

Query: 242 ADPVNNNAWSYATNFVPGK 248
           A PVNNNAW+YATNFVPGK
Sbjct: 245 AGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of Sed0027151 vs. ExPASy Swiss-Prot
Match: P07371 (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum OX=3888 GN=AB80 PE=1 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 3.1e-128
Identity = 224/263 (85.17%), Postives = 234/263 (88.97%), Query Frame = 0


Query: 2   AAMTLSSPFI-GKAVPLNAPTELAPAVR----------------SPWYGPDRVKYLGPFS 61
           ++M LSSP + GK + LN  ++   A R                SPWYGPDRVKYLGPFS
Sbjct: 7   SSMALSSPTLAGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFS 66

Query: 62  GEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNG 121
           GE PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNG
Sbjct: 67  GESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNG 126

Query: 122 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLG 181
           VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA+QV+LMGAVEGYRIAGGPLG
Sbjct: 127 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLG 186

Query: 182 EITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
           E+ DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
Sbjct: 187 EVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 246

Query: 242 ADHLADPVNNNAWSYATNFVPGK 248
           ADHLADPVNNNAWSYATNFVPGK
Sbjct: 247 ADHLADPVNNNAWSYATNFVPGK 269

[Close]

BLAST of Sed0027151 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 5.2e-128
Identity = 215/219 (98.17%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 29  SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAM 88
           SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAM
Sbjct: 37  SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 96

Query: 89  LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVV 148
           LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVV
Sbjct: 97  LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVV 156

Query: 149 LMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 208
           LMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG
Sbjct: 157 LMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 216

Query: 209 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 248
           FFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 217 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255

[Close]

BLAST of Sed0027151 vs. ExPASy Swiss-Prot
Match: P27490 (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum OX=3888 GN=CAB8 PE=1 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 2.6e-127
Identity = 214/230 (93.04%), Postives = 222/230 (96.52%), Query Frame = 0


Query: 18  NAPTELAPAVRSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNR 77
           +A T+   +  SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFSKNR
Sbjct: 39  SATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNR 98

Query: 78  ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 137
           ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ
Sbjct: 99  ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 158

Query: 138 SILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELK 197
           SILAIWA+QV+LMGAVEGYRIAGGPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKELK
Sbjct: 159 SILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELK 218

Query: 198 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 248
           NGRLAMFSMFGFFVQAIVTGKGPLENLADHL+DPVNNNAWSYATNFVPGK
Sbjct: 219 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268

[Close]

BLAST of Sed0027151 vs. ExPASy Swiss-Prot
Match: P12329 (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays OX=4577 GN=CAB1 PE=1 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 2.9e-126
Identity = 210/218 (96.33%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 29  SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAM 88
           SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAM
Sbjct: 44  SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 103

Query: 89  LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVV 148
           LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVV
Sbjct: 104 LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 163

Query: 149 LMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 208
           LMGAVEGYRIAGGPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG
Sbjct: 164 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 223

Query: 209 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 247
           FFVQAIVTGKGPLENLADH+ADPVNNNAW+YATNFVPG
Sbjct: 224 FFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPG 261

[Close]

BLAST of Sed0027151 vs. ExPASy TrEMBL
Match: A0A6J1KEF6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493100 PE=3 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 8.6e-134
Identity = 237/265 (89.43%), Postives = 241/265 (90.94%), Query Frame = 0


Query: 1   MAAMTLSSPFIGKAVPLNAPTELAPAVR------------------SPWYGPDRVKYLGP 60
           MAAM LSS F GKAVPLNAPTEL  +VR                  SPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA Q+VLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQIVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 248
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0027151 vs. ExPASy TrEMBL
Match: A0A6J1GAK0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452433 PE=3 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.5e-133
Identity = 237/265 (89.43%), Postives = 241/265 (90.94%), Query Frame = 0


Query: 1   MAAMTLSSPFIGKAVPLNAPTELAPAVR------------------SPWYGPDRVKYLGP 60
           MAAM LSS F GKAVPLNAPTEL  +VR                  SPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 248
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0027151 vs. ExPASy TrEMBL
Match: A0A5D3DAB9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00790 PE=3 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 5.6e-133
Identity = 235/265 (88.68%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 1   MAAMTLSSPFIGKAVPLNAPTELAPAVR------------------SPWYGPDRVKYLGP 60
           MAAM LSS F GK VPLNAPTEL+ +VR                  SPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYL GEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 248
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0027151 vs. ExPASy TrEMBL
Match: A0A1S3BHH5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489893 PE=3 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 5.6e-133
Identity = 235/265 (88.68%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 1   MAAMTLSSPFIGKAVPLNAPTELAPAVR------------------SPWYGPDRVKYLGP 60
           MAAM LSS F GK VPLNAPTEL+ +VR                  SPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYL GEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 248
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0027151 vs. ExPASy TrEMBL
Match: A0A6J1J722 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481846 PE=3 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 2.8e-132
Identity = 232/265 (87.55%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 1   MAAMTLSSPFIGKAVPLNAPTELAPAVR------------------SPWYGPDRVKYLGP 60
           MA M LSS F GKA+PLNAPTEL+ +VR                  SPWYGPDRVKYLGP
Sbjct: 1   MATMALSSTFTGKAIPLNAPTELSSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYL GEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  LSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 248
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0027151 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 436.8 bits (1122), Expect = 1.2e-122
Identity = 217/263 (82.51%), Postives = 232/263 (88.21%), Query Frame = 0


Query: 2   AAMTLSSPFI-GKAVPLN-APTELAPAVR--------------SPWYGPDRVKYLGPFSG 61
           + M LSSP + GKAV L+ A +E+    R              SPWYG DRVKYLGPFSG
Sbjct: 4   STMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGPFSG 63

Query: 62  EPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGV 121
           EPPSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIHSRWAMLGALGCVFPELL+RNGV
Sbjct: 64  EPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGV 123

Query: 122 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAG-GPLG 181
           KFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LMGAVEGYR+AG GPLG
Sbjct: 124 KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLG 183

Query: 182 EITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
           E  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
Sbjct: 184 EAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 243

Query: 242 ADHLADPVNNNAWSYATNFVPGK 248
           ADHLADPVNNNAW++ATNFVPGK
Sbjct: 244 ADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of Sed0027151 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-122
Identity = 216/262 (82.44%), Postives = 227/262 (86.64%), Query Frame = 0


Query: 2   AAMTLSSP-FIGKAVPLNAPTELAPA--------------VRSPWYGPDRVKYLGPFSGE 61
           + M LSSP F GKAV   A   L                   SPWYG DRVKYLGPFSGE
Sbjct: 4   STMALSSPAFAGKAVKPAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGE 63

Query: 62  PPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 121
           PPSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIHSRWAMLGALGCVFPELL+RNGVK
Sbjct: 64  PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 123

Query: 122 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAG-GPLGE 181
           FGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LMGAVEGYR+AG GPLGE
Sbjct: 124 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGE 183

Query: 182 ITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 241
             D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Sbjct: 184 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 243

Query: 242 DHLADPVNNNAWSYATNFVPGK 248
           DHLADPVNNNAW++ATNFVPGK
Sbjct: 244 DHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of Sed0027151 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 435.3 bits (1118), Expect = 3.4e-122
Identity = 216/264 (81.82%), Postives = 232/264 (87.88%), Query Frame = 0


Query: 2   AAMTLSSP-FIGKAVPLN-APTELAPAVR---------------SPWYGPDRVKYLGPFS 61
           + M LSSP F GKAV L+ A +E+  + R               SPWYG DRVKYLGPFS
Sbjct: 4   STMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFS 63

Query: 62  GEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNG 121
           GE PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIHSRWAMLGALGCVFPELL+RNG
Sbjct: 64  GESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 123

Query: 122 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAG-GPL 181
           VKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LMGAVEGYR+AG GPL
Sbjct: 124 VKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPL 183

Query: 182 GEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
           GE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+EN
Sbjct: 184 GEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 243

Query: 242 LADHLADPVNNNAWSYATNFVPGK 248
           LADHLADPVNNNAW++ATNFVPGK
Sbjct: 244 LADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0027151 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 434.9 bits (1117), Expect = 4.4e-122
Identity = 216/264 (81.82%), Postives = 232/264 (87.88%), Query Frame = 0


Query: 2   AAMTLSSP-FIGKAVPLN-APTELAPAVR---------------SPWYGPDRVKYLGPFS 61
           + M LSSP F GKAV L+ A +E+  + R               SPWYG DRVKYLGPFS
Sbjct: 4   STMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFS 63

Query: 62  GEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNG 121
           GE PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIHSRWAMLGALGCVFPELL+RNG
Sbjct: 64  GESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 123

Query: 122 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAG-GPL 181
           VKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LMGAVEGYR+AG GPL
Sbjct: 124 VKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPL 183

Query: 182 GEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
           GE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+EN
Sbjct: 184 GEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 243

Query: 242 LADHLADPVNNNAWSYATNFVPGK 248
           LADHLADPVNNNAW++ATNFVPGK
Sbjct: 244 LADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0027151 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 434.9 bits (1117), Expect = 4.4e-122
Identity = 216/264 (81.82%), Postives = 232/264 (87.88%), Query Frame = 0


Query: 2   AAMTLSSP-FIGKAVPLN-APTELAPAVR---------------SPWYGPDRVKYLGPFS 61
           + M LSSP F GKAV L+ A +E+  + R               SPWYG DRVKYLGPFS
Sbjct: 4   STMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFS 63

Query: 62  GEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNG 121
           GE PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIHSRWAMLGALGCVFPELL+RNG
Sbjct: 64  GESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 123

Query: 122 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAG-GPL 181
           VKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LMGAVEGYR+AG GPL
Sbjct: 124 VKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPL 183

Query: 182 GEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
           GE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+EN
Sbjct: 184 GEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 243

Query: 242 LADHLADPVNNNAWSYATNFVPGK 248
           LADHLADPVNNNAW++ATNFVPGK
Sbjct: 244 LADHLADPVNNNAWAFATNFVPGK 267

The following BLAST results are available for this feature:

BLAST of Sed0027151 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903667.1	2.8e-134	89.43	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]
XP_022998479.1	1.8e-133	89.43	chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima]	[more]
XP_022948926.1	3.0e-133	89.43	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_02...	[more]
XP_008447450.1	1.2e-132	88.68	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >...	[more]
XP_022983188.1	5.7e-132	87.55	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima]	[more]

BLAST of Sed0027151 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P09756	2.3e-128	86.87	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
P07371	3.1e-128	85.17	Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum OX=3888 GN=...	[more]
P08221	5.2e-128	98.17	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P27490	2.6e-127	93.04	Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum OX=3888 GN=CAB...	[more]
P12329	2.9e-126	96.33	Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays OX=4577 GN=CAB1 PE=...	[more]

BLAST of Sed0027151 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KEF6	8.6e-134	89.43	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GAK0	1.5e-133	89.43	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3DAB9	5.6e-133	88.68	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BHH5	5.6e-133	88.68	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1J722	2.8e-132	87.55	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Sed0027151 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	1.2e-122	82.51	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT2G34420.1	2.0e-122	82.44	photosystem II light harvesting complex gene B1B2	[more]
AT1G29930.1	3.4e-122	81.82	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	4.4e-122	81.82	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	4.4e-122	81.82	chlorophyll A/B-binding protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 47..213 e-value: 3.1E-49 score: 167.6
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 38..240 e-value: 3.4E-90 score: 303.3
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 28..247
None	No IPR available	PANTHER	PTHR21649:SF128	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 28..247
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 30..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027151.1	Sed0027151.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding