Sed0027125 (gene) Chayote v1

Overview


Name	Sed0027125
Type	gene
Organism	Sechium edule (Chayote v1)
Description	BHLH domain-containing protein
Location	LG03: 5449890 .. 5452056 (+)
RNA-Seq Expression	Sed0027125
Synteny	Sed0027125

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTTGCAAACTCATTTGTACAAGAAATGGATGGAAGCCATGAGAATCCAAATGCTAATTTTGATCATCATCATCATCAAAATCAGCTGCAAATGTCTCAATCTCTCATAAACTTCAAATGTGGGATTGAGAATAATAATCCTTTCCATAAGAATAATATAAATGAATCAGAATCATTGCTGAGCTTTGAGCCACAAGGGGTTTGTCAATTAGGGCCTTACACTTGGGATCAGCAGCAGCGTTTGATGGACGATCCCAATTGCTTTCAAACAGCTACTAATAATTACAGCATTTCAAAACACAACAAAAATGGAGATGGGTCTGTGTTTGAGTGGCTCTATTCTGAGGTACCTGTTGTTTCTGATCTCGATCATGACGATGAACCAGCTCGGGAATTTCGTGATCAAAAGCGACCCCATTCGGTATTGCATCACTTTGATTTTTATAGCTCTGTTTGATAATTGTTTCATTTAAAGTTTCAATTTTTAAATTTTTCCCAAATTTCTCAAAATTAAAGTTTTTTCTTATTTCAAATTGTCGTATACCATTTTTCAACAATGTTTAGAAATTGGGAGATTCGAACCTCTAGTTTTTTAGTTACTAGATTATACATAATATTAGTAGAGTTGTACTCTTAGAGGCAGTTTGTTTGCCATATTTAAAGAGGACTTGGTTTATGAAGTTAGATTGAGGAGTTATTATGAGTAATTAAAAATTGAGAGTTGTAACAAAAAACTAACTTATATATGGTTTTTGTGTAGAGAAGTTAGAAACAAAATCTTGTTTGAATGTAGATTTTAAATGAGTAATTATTTTGAGTAGATAAAAAAGTAAAGATTAAAAATAAATTATCTTGATTGATTTGAAATAAATGATTAAAATTGAGTAGTTAGAATGATTGAATAATTATAAATGAATGGTTAAGTAAAAAAAAATGGAATGTTTCCTCAACAAACATGAAAAGTGCAAAATCTAATACATAATTTTTCAAATGATTATCAAACGGATTTTAACTCATTTACTTCGGGTTTTTTTTTTGCTCTTACATTTGTGTTAACTAACAAAAAGAAAGTGTTTGATTGATTGACACAGGGAGAAAGCAGTGGTGGTATTTGCAAGAAGCAATGTAGTGATACAACTAAAAAACAGAAACCAAAATCATCAACAGCCAATAATAAGGATCCTCAGAGCATTGCAGCCAAGGTTTTATTTTTGTTTTGACAACGTTGGCAGCTTGCAATTTAAGCAACAACAATTATTTATACATAGGATTTAATATTCTAAATTAAAACAAAATCTCTATTTTTTTTTTCGTTAGAATCGACGAGAGAGGATTAGCGAGCGCCTGAAGATGCTCCAAGAATTGGTTCCCAATGGCTCCAAGGTGCATAAATAACATTTTGCTTTATGTATTTTAAGGTTTTTTTTTTTTTTTTTTTGTCCTTGAATTTCTAAAACTTTGACTTTGTTTTTTTTTTTTTTTACTTCTATGAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTCAAATTTCTTCAACTACAAGTGAAGGTACACATTTCCATTCACTTCTTTTCTAAATTTAGGGTTTTTGTCTTCACATTCTAACTTTTTGTACTTGCCAAGAATCCCATTAAAATTTCATAAAGAAGGGTGAAATTTTACATTTTCATTTCTATGTAAAATGAAAAAAAAAAAAAAAAAAAGGTGAGGAGTTCTTAGCATAGGATGATTTTAGTTCAAAACCAATCAAATTGAGAAGTAATTCATATATGTTATAAAAGTGTTGAGAATTTGTTATCTTTCTAATATAAGACAGGGTGAAGATTTCCAACAAAATCAACCAAAGCATACTTCATGAATTCAAATCTTACACCCTAATTATTGTTGTGCTAAAAAAATTAGAAATCTTAAAAAATTCATAATTTTCATATAGTTTATAATGTAATGAGGGCAATTGTCTTATCCTTTCTACTTTGCTTTGTTTTAATCTTTGTGATAAATTTTTTTTTGAATTTTAGATCCTAGCGACTGATGAATTTTGGCCCGCTCAAGATGGGAAAGTTCCGGATATTTCCCAAGTTAAGGAAGCCATTGATGCCATTCTTTTATCTCAAAGAGAAAGAAGCTCAAGCTCCAACAGTGAAAAGTGA

mRNA sequence

ATGGCACTTGCAAACTCATTTGTACAAGAAATGGATGGAAGCCATGAGAATCCAAATGCTAATTTTGATCATCATCATCATCAAAATCAGCTGCAAATGTCTCAATCTCTCATAAACTTCAAATGTGGGATTGAGAATAATAATCCTTTCCATAAGAATAATATAAATGAATCAGAATCATTGCTGAGCTTTGAGCCACAAGGGGTTTGTCAATTAGGGCCTTACACTTGGGATCAGCAGCAGCGTTTGATGGACGATCCCAATTGCTTTCAAACAGCTACTAATAATTACAGCATTTCAAAACACAACAAAAATGGAGATGGGTCTGTGTTTGAGTGGCTCTATTCTGAGGTACCTGTTGTTTCTGATCTCGATCATGACGATGAACCAGCTCGGGAATTTCGTGATCAAAAGCGACCCCATTCGGGAGAAAGCAGTGGTGGTATTTGCAAGAAGCAATGTAGTGATACAACTAAAAAACAGAAACCAAAATCATCAACAGCCAATAATAAGGATCCTCAGAGCATTGCAGCCAAGAATCGACGAGAGAGGATTAGCGAGCGCCTGAAGATGCTCCAAGAATTGGTTCCCAATGGCTCCAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTCAAATTTCTTCAACTACAAGTGAAGATCCTAGCGACTGATGAATTTTGGCCCGCTCAAGATGGGAAAGTTCCGGATATTTCCCAAGTTAAGGAAGCCATTGATGCCATTCTTTTATCTCAAAGAGAAAGAAGCTCAAGCTCCAACAGTGAAAAGTGA

Coding sequence (CDS)

ATGGCACTTGCAAACTCATTTGTACAAGAAATGGATGGAAGCCATGAGAATCCAAATGCTAATTTTGATCATCATCATCATCAAAATCAGCTGCAAATGTCTCAATCTCTCATAAACTTCAAATGTGGGATTGAGAATAATAATCCTTTCCATAAGAATAATATAAATGAATCAGAATCATTGCTGAGCTTTGAGCCACAAGGGGTTTGTCAATTAGGGCCTTACACTTGGGATCAGCAGCAGCGTTTGATGGACGATCCCAATTGCTTTCAAACAGCTACTAATAATTACAGCATTTCAAAACACAACAAAAATGGAGATGGGTCTGTGTTTGAGTGGCTCTATTCTGAGGTACCTGTTGTTTCTGATCTCGATCATGACGATGAACCAGCTCGGGAATTTCGTGATCAAAAGCGACCCCATTCGGGAGAAAGCAGTGGTGGTATTTGCAAGAAGCAATGTAGTGATACAACTAAAAAACAGAAACCAAAATCATCAACAGCCAATAATAAGGATCCTCAGAGCATTGCAGCCAAGAATCGACGAGAGAGGATTAGCGAGCGCCTGAAGATGCTCCAAGAATTGGTTCCCAATGGCTCCAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTCAAATTTCTTCAACTACAAGTGAAGATCCTAGCGACTGATGAATTTTGGCCCGCTCAAGATGGGAAAGTTCCGGATATTTCCCAAGTTAAGGAAGCCATTGATGCCATTCTTTTATCTCAAAGAGAAAGAAGCTCAAGCTCCAACAGTGAAAAGTGA

Protein sequence

MALANSFVQEMDGSHENPNANFDHHHHQNQLQMSQSLINFKCGIENNNPFHKNNINESESLLSFEPQGVCQLGPYTWDQQQRLMDDPNCFQTATNNYSISKHNKNGDGSVFEWLYSEVPVVSDLDHDDEPAREFRDQKRPHSGESSGGICKKQCSDTTKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQRERSSSSNSEK

Homology

[Close]

BLAST of Sed0027125 vs. NCBI nr
Match: XP_022990966.1 (putative transcription factor bHLH086 [Cucurbita maxima])

HSP 1 Score: 346.3 bits (887), Expect = 2.4e-91
Identity = 202/290 (69.66%), Postives = 215/290 (74.14%), Query Frame = 0


Query: 1   MALANSFVQEMDG--------------SHENPNANF---------DHHHHQNQLQMSQSL 60
           MALANS V E DG              +H+ PNA F           HH Q Q Q+ QSL
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSLPIATHDTPNATFLFRNTTNYQLDHHQQQQQQLPQSL 60

Query: 61  INFKCGIENNNPFHKNNINESESLLSFEPQGVCQLGPYTWDQQQRLMDDPNCFQTATNNY 120
           INFKCGI+  N FHKNN    ESLLSFEPQGVCQ   Y WD  QRLM+DPNCFQTATN Y
Sbjct: 61  INFKCGID--NIFHKNN----ESLLSFEPQGVCQ-DTYNWDDHQRLMEDPNCFQTATNGY 120

Query: 121 SISKHNKNGDGSVFEWLYSEVPVVSDLDHDDEPAREFRDQKRPHSGESSGGICKKQC-SD 180
           S  K NKNGDGSV++WLYSE   VSD   + E A E  +QKRPH GESSG + KKQC + 
Sbjct: 121 SSPKENKNGDGSVYDWLYSEATGVSDGIQEAEGAHEIANQKRPHMGESSGSVSKKQCTAA 180

Query: 181 TTKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAISYVK 240
             KKQKPKSSTA  KDPQSIAAKNRRERISERLK+LQELVPNGSKVDLVTMLEKAISYVK
Sbjct: 181 AAKKQKPKSSTA--KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 240

Query: 241 FLQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQRERSSSSNSEK 267
           FLQLQVKILATDEFWP Q GK PDISQVKEAIDAIL SQRERSSSSNS+K
Sbjct: 241 FLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 281

[Close]

BLAST of Sed0027125 vs. NCBI nr
Match: XP_023528222.1 (putative transcription factor bHLH086 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.1 bits (884), Expect = 5.3e-91
Identity = 201/289 (69.55%), Postives = 215/289 (74.39%), Query Frame = 0


Query: 1   MALANSFVQEMDG--------------SHENPNA--------NFDHHHHQNQLQMSQSLI 60
           MALANS V E DG              +H+ PNA        N+   HHQ Q Q+ QSLI
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQLPQSLI 60

Query: 61  NFKCGIENNNPFHKNNINESESLLSFEPQGVCQLGPYTWDQQQRLMDDPNCFQTATNNYS 120
           NFKCGI+  N FHKNN    ESLLSFEPQGV Q   Y WD  QRLM+DPNCFQTATN YS
Sbjct: 61  NFKCGID--NIFHKNN----ESLLSFEPQGVGQ-DTYNWDDHQRLMEDPNCFQTATNGYS 120

Query: 121 ISKHNKNGDGSVFEWLYSEVPVVSDLDHDDEPAREFRDQKRPHSGESSGGICKKQCSD-T 180
             K NKNGDGSV++WLYSE   VSD   + E A E  +QKRPH GESSG + KKQC+   
Sbjct: 121 SPKENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEIANQKRPHMGESSGSVSKKQCTTVA 180

Query: 181 TKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAISYVKF 240
            KKQKPKSSTA  KDPQSIAAKNRRERISERLK+LQELVPNGSKVDLVTMLEKAISYVKF
Sbjct: 181 AKKQKPKSSTA--KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKF 240

Query: 241 LQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQRERSSSSNSEK 267
           LQLQVKILATDEFWP Q GK PDISQVKEAIDAIL SQRERSSSSNS+K
Sbjct: 241 LQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 280

[Close]

BLAST of Sed0027125 vs. NCBI nr
Match: KAG6602034.1 (putative transcription factor basic helix-loop-helix 86, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345.1 bits (884), Expect = 5.3e-91
Identity = 201/290 (69.31%), Postives = 215/290 (74.14%), Query Frame = 0


Query: 1   MALANSFVQEMDG--------------SHENPNANF---------DHHHHQNQLQMSQSL 60
           MALANS V E DG              +H+ PNA F           HH Q Q Q+ QSL
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQLPQSL 60

Query: 61  INFKCGIENNNPFHKNNINESESLLSFEPQGVCQLGPYTWDQQQRLMDDPNCFQTATNNY 120
           INFKCGI+  + FHKNN    ESLLSFEPQGVCQ   Y WD  QRLM+DPNCFQTATN Y
Sbjct: 61  INFKCGID--SIFHKNN----ESLLSFEPQGVCQ-DTYNWDDHQRLMEDPNCFQTATNGY 120

Query: 121 SISKHNKNGDGSVFEWLYSEVPVVSDLDHDDEPAREFRDQKRPHSGESSGGICKKQC-SD 180
           S  K NKNGDGSV++WLYSE   VSD   + E A E  +QKRPH GESSG + KKQC + 
Sbjct: 121 SSPKENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAA 180

Query: 181 TTKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAISYVK 240
             KKQKPKSSTA  KDPQSIAAKNRRERISERLK+LQELVPNGSKVDLVTMLEKAISYVK
Sbjct: 181 AAKKQKPKSSTA--KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 240

Query: 241 FLQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQRERSSSSNSEK 267
           FLQLQVKILATDEFWP Q GK PDISQVKEAIDAIL SQRERSSSSNS+K
Sbjct: 241 FLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 281

[Close]

BLAST of Sed0027125 vs. NCBI nr
Match: XP_022963447.1 (putative transcription factor bHLH086 [Cucurbita moschata])

HSP 1 Score: 342.0 bits (876), Expect = 4.5e-90
Identity = 201/293 (68.60%), Postives = 215/293 (73.38%), Query Frame = 0


Query: 1   MALANSFVQEMDG--------------SHENPNANF----------DHH--HHQNQLQMS 60
           MALANS V E DG              +H+ PNA F          DHH    Q Q Q+ 
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60

Query: 61  QSLINFKCGIENNNPFHKNNINESESLLSFEPQGVCQLGPYTWDQQQRLMDDPNCFQTAT 120
            SLINFKCGI+  + FHKNN    ESLLSFEPQGVCQ   Y WD  QRLM+DPNCFQTAT
Sbjct: 61  HSLINFKCGID--SIFHKNN----ESLLSFEPQGVCQ-DTYNWDDHQRLMEDPNCFQTAT 120

Query: 121 NNYSISKHNKNGDGSVFEWLYSEVPVVSDLDHDDEPAREFRDQKRPHSGESSGGICKKQC 180
           N YS  K NKNGDGSV++WLYSE   VSD   + E A E  +QKRPH GESSG + KKQC
Sbjct: 121 NGYSSPKENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQC 180

Query: 181 -SDTTKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAIS 240
            +   KKQKPKSSTA  KDPQSIAAKNRRERISERLK+LQELVPNGSKVDLVTMLEKAIS
Sbjct: 181 TAAAAKKQKPKSSTA--KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 240

Query: 241 YVKFLQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQRERSSSSNSEK 267
           YVKFLQLQVKILATDEFWP Q GK PDISQVKEAIDAIL SQRERSSSSNS+K
Sbjct: 241 YVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 284

[Close]

BLAST of Sed0027125 vs. NCBI nr
Match: XP_038907041.1 (putative transcription factor bHLH086 [Benincasa hispida])

HSP 1 Score: 322.4 bits (825), Expect = 3.7e-84
Identity = 197/297 (66.33%), Postives = 212/297 (71.38%), Query Frame = 0


Query: 1   MALANSFVQEMDG---------------SHENPNANF--------DHHHHQNQLQMSQSL 60
           MAL NS VQE+DG                HENP+ NF           H Q Q Q  QSL
Sbjct: 1   MALTNSAVQEVDGMEKNGGYLKTLATGKGHENPDGNFVFRNTTNYQLDHQQQQQQQQQSL 60

Query: 61  INFKCGIENNNPFHKNNINESESLLSFEPQGVCQLG-PYTWDQQQRLMDDPNCFQTAT-- 120
           INFKCGIEN    HK N   SESLLSFE QG+CQL   Y WD QQR+M+DPNCFQTAT  
Sbjct: 61  INFKCGIENTILGHKMN---SESLLSFEAQGICQLDHTYNWDDQQRVMEDPNCFQTATNH 120

Query: 121 NNYSISK--HNKNGD-GSVFEWLYSEVPV-VSDLDHDDEPARE-FRDQKRPHSGESSGGI 180
           NNYS SK  HNKNGD GSV+EWLYSE     SD   + E  ++   + KR H+GESSG +
Sbjct: 121 NNYSPSKDHHNKNGDNGSVYEWLYSEPTTDFSDAIQEAEATQDIILNHKRSHTGESSGSV 180

Query: 181 CKKQCSDTTKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLE 240
           CKKQC+   KKQK KS T   KDPQSIAAKNRRERISERLK+LQ+LVPNGSKVDLVTMLE
Sbjct: 181 CKKQCTAAAKKQKTKSPT--TKDPQSIAAKNRRERISERLKILQDLVPNGSKVDLVTMLE 240

Query: 241 KAISYVKFLQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQRERSSSSNSEK 267
           KAISYVKFLQLQVKILATDEFWP Q GK PDISQVKEAID IL SQRERSSSSNSEK
Sbjct: 241 KAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 292

[Close]

BLAST of Sed0027125 vs. ExPASy Swiss-Prot
Match: Q9FJ00 (Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=RSL1 PE=1 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 6.2e-42
Identity = 104/186 (55.91%), Postives = 131/186 (70.43%), Query Frame = 0


Query: 82  RLMDDPNCFQTA-----TNNYSISKHNKNGDGSVFEWLYSEVPVVSDLDHDDEPAREFRD 141
           R++  PN F+T      T+N        +G+G   +WLYS   +V+     +  + +   
Sbjct: 120 RVIKTPNSFETTSSFGLTSNSMSKPATNHGNG---DWLYSGSTIVNIGSRHESTSPKLAG 179

Query: 142 QKRPHSGESSGGICKKQCSDTTKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELV 201
            KRP +GE++  + KK  S T  K KPK++T + KDPQS+AAKNRRERISERLK+LQELV
Sbjct: 180 NKRPFTGENT-QLSKKPSSGTNGKIKPKATT-SPKDPQSLAAKNRRERISERLKVLQELV 239

Query: 202 PNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQR 261
           PNG+KVDLVTMLEKAI YVKFLQ+QVK+LA DEFWPAQ GK PDISQVKEAIDAIL S +
Sbjct: 240 PNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFWPAQGGKAPDISQVKEAIDAILSSSQ 299

Query: 262 ERSSSS 263
             S+S+
Sbjct: 300 RDSNST 300

[Close]

BLAST of Sed0027125 vs. ExPASy Swiss-Prot
Match: Q9C707 (Transcription factor RHD6 OS=Arabidopsis thaliana OX=3702 GN=RHD6 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.1e-41
Identity = 100/151 (66.23%), Postives = 120/151 (79.47%), Query Frame = 0


Query: 112 EWLYSEVPVVSDLDHDDEPAREFRDQKRPHSGESSGGICKKQCSDTTKKQKPKSSTANNK 171
           +WLYS+  VV+    ++  + +    KR H+GES+    KK  S  T K KPK +T + K
Sbjct: 146 DWLYSDSTVVTTGSRNESLSPKSAGNKRSHTGESTQP-SKKLSSGVTGKTKPKPTT-SPK 205

Query: 172 DPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW 231
           DPQS+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKAISYVKFLQ+QVK+LATDEFW
Sbjct: 206 DPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFW 265

Query: 232 PAQDGKVPDISQVKEAIDAIL-LSQRERSSS 262
           PAQ GK PDISQVK+AIDAIL  SQR+R+S+
Sbjct: 266 PAQGGKAPDISQVKDAIDAILSSSQRDRNSN 294

[Close]

BLAST of Sed0027125 vs. ExPASy Swiss-Prot
Match: Q8LEG1 (Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.1e-17
Identity = 62/159 (38.99%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 76  TWDQQQRLMDDPNCFQTATNNYSISKHNKNGDGSVFEWLYSEVP--VVSDLDHDDEPARE 135
           +WDQ   L +  +  +   +  ++ K N N D +  E   S+    V S+ +  DE    
Sbjct: 83  SWDQSHHLQETSSLKRKLLDVENLCKTNSNCDVTRQELAKSKKKQRVSSESNTVDESNTN 142

Query: 136 FRDQKRPHSGES-SGGICKKQCSDTTKKQKPKSSTANNKDPQSIAAKNRRERISERLKML 195
           + D      G+S S     ++ S T+ K K +++     DPQS+ A+ RRE+I+ERLK L
Sbjct: 143 WVD------GQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTL 202

Query: 196 QELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW 232
           Q LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 203 QNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 235

[Close]

BLAST of Sed0027125 vs. ExPASy Swiss-Prot
Match: Q84WK0 (Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.8e-16
Identity = 42/70 (60.00%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 162 KPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAISYVKFLQLQ 221
           K ++S     DPQS+ A+ RRERI+ERL++LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324

Query: 222 VKILATDEFW 232
           +K+L++D+ W
Sbjct: 325 IKLLSSDDLW 334

[Close]

BLAST of Sed0027125 vs. ExPASy Swiss-Prot
Match: Q3E7L7 (Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 45/79 (56.96%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 155 SDTTK--KQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAI 214
           S+T+K  K+K K++     DPQS+ A+ RRERI++RLK LQ LVPNG+KVD+ TMLE A+
Sbjct: 122 SNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAV 181

Query: 215 SYVKFLQLQVKILATDEFW 232
            YVKFLQLQ+K+L++++ W
Sbjct: 182 HYVKFLQLQIKLLSSEDLW 200

[Close]

BLAST of Sed0027125 vs. ExPASy TrEMBL
Match: A0A6J1JPE9 (putative transcription factor bHLH086 OS=Cucurbita maxima OX=3661 GN=LOC111487700 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.2e-91
Identity = 202/290 (69.66%), Postives = 215/290 (74.14%), Query Frame = 0


Query: 1   MALANSFVQEMDG--------------SHENPNANF---------DHHHHQNQLQMSQSL 60
           MALANS V E DG              +H+ PNA F           HH Q Q Q+ QSL
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSLPIATHDTPNATFLFRNTTNYQLDHHQQQQQQLPQSL 60

Query: 61  INFKCGIENNNPFHKNNINESESLLSFEPQGVCQLGPYTWDQQQRLMDDPNCFQTATNNY 120
           INFKCGI+  N FHKNN    ESLLSFEPQGVCQ   Y WD  QRLM+DPNCFQTATN Y
Sbjct: 61  INFKCGID--NIFHKNN----ESLLSFEPQGVCQ-DTYNWDDHQRLMEDPNCFQTATNGY 120

Query: 121 SISKHNKNGDGSVFEWLYSEVPVVSDLDHDDEPAREFRDQKRPHSGESSGGICKKQC-SD 180
           S  K NKNGDGSV++WLYSE   VSD   + E A E  +QKRPH GESSG + KKQC + 
Sbjct: 121 SSPKENKNGDGSVYDWLYSEATGVSDGIQEAEGAHEIANQKRPHMGESSGSVSKKQCTAA 180

Query: 181 TTKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAISYVK 240
             KKQKPKSSTA  KDPQSIAAKNRRERISERLK+LQELVPNGSKVDLVTMLEKAISYVK
Sbjct: 181 AAKKQKPKSSTA--KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 240

Query: 241 FLQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQRERSSSSNSEK 267
           FLQLQVKILATDEFWP Q GK PDISQVKEAIDAIL SQRERSSSSNS+K
Sbjct: 241 FLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 281

[Close]

BLAST of Sed0027125 vs. ExPASy TrEMBL
Match: A0A6J1HFA4 (putative transcription factor bHLH086 OS=Cucurbita moschata OX=3662 GN=LOC111463706 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 2.2e-90
Identity = 201/293 (68.60%), Postives = 215/293 (73.38%), Query Frame = 0


Query: 1   MALANSFVQEMDG--------------SHENPNANF----------DHH--HHQNQLQMS 60
           MALANS V E DG              +H+ PNA F          DHH    Q Q Q+ 
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60

Query: 61  QSLINFKCGIENNNPFHKNNINESESLLSFEPQGVCQLGPYTWDQQQRLMDDPNCFQTAT 120
            SLINFKCGI+  + FHKNN    ESLLSFEPQGVCQ   Y WD  QRLM+DPNCFQTAT
Sbjct: 61  HSLINFKCGID--SIFHKNN----ESLLSFEPQGVCQ-DTYNWDDHQRLMEDPNCFQTAT 120

Query: 121 NNYSISKHNKNGDGSVFEWLYSEVPVVSDLDHDDEPAREFRDQKRPHSGESSGGICKKQC 180
           N YS  K NKNGDGSV++WLYSE   VSD   + E A E  +QKRPH GESSG + KKQC
Sbjct: 121 NGYSSPKENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQC 180

Query: 181 -SDTTKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAIS 240
            +   KKQKPKSSTA  KDPQSIAAKNRRERISERLK+LQELVPNGSKVDLVTMLEKAIS
Sbjct: 181 TAAAAKKQKPKSSTA--KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 240

Query: 241 YVKFLQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQRERSSSSNSEK 267
           YVKFLQLQVKILATDEFWP Q GK PDISQVKEAIDAIL SQRERSSSSNS+K
Sbjct: 241 YVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 284

[Close]

BLAST of Sed0027125 vs. ExPASy TrEMBL
Match: A0A6J1CJS8 (putative transcription factor bHLH086 OS=Momordica charantia OX=3673 GN=LOC111011939 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 6.8e-84
Identity = 203/294 (69.05%), Postives = 216/294 (73.47%), Query Frame = 0


Query: 1   MALANSFVQEMDG-------SHENPNAN---------FDHHHHQNQLQMSQSLINFKCGI 60
           MALANS VQE+DG       +HENPN+N          DHHHH    Q SQSLINFKCGI
Sbjct: 1   MALANSAVQEVDGMKTLAMATHENPNSNSVFRNPSYQLDHHHHH---QGSQSLINFKCGI 60

Query: 61  ENNNPFHKNNINESESLLSFEPQGVCQLGPYTW-DQQQRLMDDPNC-FQTATNNYSISKH 120
           +  N  HKNN N +ESLLSFEPQ       + W DQQQRLMDDPNC FQTAT NYS SK 
Sbjct: 61  D--NLLHKNNNNNNESLLSFEPQDT-----FHWVDQQQRLMDDPNCSFQTAT-NYSPSKD 120

Query: 121 NK--------NGDGSVFEWLYSE-VPVVSDLDHDDEPAREFRDQKRPHSGESSGGICKKQ 180
           N         N   SV+EWLYSE    VSD  H+ E A+E  +QKR    ESSGG+CKK+
Sbjct: 121 NNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKR 180

Query: 181 C-SDTTKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAI 240
           C S TTKKQKPKSS A  KDPQSIAAKNRRERISERLK+LQELVPNGSKVDLVTMLEKAI
Sbjct: 181 CTSATTKKQKPKSSAA-AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 240

Query: 241 SYVKFLQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQRERSSSSNSEK 267
           SYVKFLQLQVKILATDEFWP Q GKVPDISQVKEAID IL SQRERSSSS SEK
Sbjct: 241 SYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK 282

[Close]

BLAST of Sed0027125 vs. ExPASy TrEMBL
Match: A0A0A0KN55 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420280 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 2.5e-78
Identity = 192/298 (64.43%), Postives = 211/298 (70.81%), Query Frame = 0


Query: 1   MALANSFVQEMDG------------------SHENPNANF---DHHHHQNQLQMSQSLIN 60
           MALANS +QE+DG                   H+NPN +F   D  ++Q   Q  QSLIN
Sbjct: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQSLIN 60

Query: 61  FKCGIENNNPFHKNNINESESLLSFEPQGVCQLG-PYTWDQQQRLMDDPNCFQTAT--NN 120
           F          HK N   +ESLLSFE QG+CQL   Y WD QQR+M+DPNCFQTAT  NN
Sbjct: 61  FG---------HKMN---NESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHNN 120

Query: 121 YSISK----HNKNGD-GSVFEWLYSEVPV-VSDLDHDDEPAREF-RDQKRPH-SGESSGG 180
           YS SK    HNKNGD GSV+EWLYSE     SD   + E  +E   + KR H +GESSG 
Sbjct: 121 YSPSKDHHHHNKNGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGS 180

Query: 181 ICKKQCSDTTKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTML 240
           +CKKQC+   KKQKPKS+TA  KDPQSIAAKNRRERISERLK+LQELVPNGSKVDLVTML
Sbjct: 181 VCKKQCTAAPKKQKPKSATA--KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTML 240

Query: 241 EKAISYVKFLQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQRERSSSSNSEK 267
           EKAISYVKFLQLQVKILATDEFWP Q GK PDISQVKEAID IL SQRERSSSSNSEK
Sbjct: 241 EKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 284

[Close]

BLAST of Sed0027125 vs. ExPASy TrEMBL
Match: A0A1S3CCR8 (putative transcription factor bHLH086 OS=Cucumis melo OX=3656 GN=LOC103499318 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 8.0e-77
Identity = 189/296 (63.85%), Postives = 210/296 (70.95%), Query Frame = 0


Query: 1   MALANSFVQEMDGSH-----------------ENPNANF---DHHHHQNQLQMSQSLINF 60
           M+LANS +QE+DG                   +NPN +F   D  ++Q  LQ  QSLINF
Sbjct: 1   MSLANSAIQEVDGMEKNGGGYLKSLAIGKGHDQNPNGDFVFRDATNYQLGLQQQQSLINF 60

Query: 61  KCGIENNNPFHKNNINESESLLSFEPQGVCQLG-PYTWDQQQRLMDDPNCFQTAT--NNY 120
                     HK N   +ESLLSFE QG+CQL   Y WD Q+R+M+DPNCFQTAT  NNY
Sbjct: 61  G---------HKMN---NESLLSFEAQGICQLDLTYNWDDQERVMEDPNCFQTATSHNNY 120

Query: 121 SISK---HNKNGD-GSVFEWLYSEVPV-VSDLDHDDEPAREF-RDQKRPHS-GESSGGIC 180
           S SK   HNKNG+ GSV+EWLY E     SD   D E  +E   + KR HS GESSG +C
Sbjct: 121 SPSKDHHHNKNGNSGSVYEWLYCESTTDFSDSIQDAEGTQEIVPNHKRSHSTGESSGSVC 180

Query: 181 KKQCSDTTKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEK 240
           KKQC+   KKQKPKS+TA  KDPQSIAAKNRRERISERLK+LQELVPNGSKVDLVTMLEK
Sbjct: 181 KKQCTAAPKKQKPKSATA--KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEK 240

Query: 241 AISYVKFLQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQRERSSSSNSEK 267
           AISYVKFLQLQVKILATDEFWP Q GK PDISQVKEAID IL SQRERSSSSN+EK
Sbjct: 241 AISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNTEK 282

[Close]

BLAST of Sed0027125 vs. TAIR 10
Match: AT5G37800.1 (RHD SIX-LIKE 1 )

HSP 1 Score: 172.6 bits (436), Expect = 4.4e-43
Identity = 104/186 (55.91%), Postives = 131/186 (70.43%), Query Frame = 0


Query: 82  RLMDDPNCFQTA-----TNNYSISKHNKNGDGSVFEWLYSEVPVVSDLDHDDEPAREFRD 141
           R++  PN F+T      T+N        +G+G   +WLYS   +V+     +  + +   
Sbjct: 120 RVIKTPNSFETTSSFGLTSNSMSKPATNHGNG---DWLYSGSTIVNIGSRHESTSPKLAG 179

Query: 142 QKRPHSGESSGGICKKQCSDTTKKQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELV 201
            KRP +GE++  + KK  S T  K KPK++T + KDPQS+AAKNRRERISERLK+LQELV
Sbjct: 180 NKRPFTGENT-QLSKKPSSGTNGKIKPKATT-SPKDPQSLAAKNRRERISERLKVLQELV 239

Query: 202 PNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPAQDGKVPDISQVKEAIDAILLSQR 261
           PNG+KVDLVTMLEKAI YVKFLQ+QVK+LA DEFWPAQ GK PDISQVKEAIDAIL S +
Sbjct: 240 PNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFWPAQGGKAPDISQVKEAIDAILSSSQ 299

Query: 262 ERSSSS 263
             S+S+
Sbjct: 300 RDSNST 300

[Close]

BLAST of Sed0027125 vs. TAIR 10
Match: AT1G66470.1 (ROOT HAIR DEFECTIVE6 )

HSP 1 Score: 170.2 bits (430), Expect = 2.2e-42
Identity = 100/151 (66.23%), Postives = 120/151 (79.47%), Query Frame = 0


Query: 112 EWLYSEVPVVSDLDHDDEPAREFRDQKRPHSGESSGGICKKQCSDTTKKQKPKSSTANNK 171
           +WLYS+  VV+    ++  + +    KR H+GES+    KK  S  T K KPK +T + K
Sbjct: 146 DWLYSDSTVVTTGSRNESLSPKSAGNKRSHTGESTQP-SKKLSSGVTGKTKPKPTT-SPK 205

Query: 172 DPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW 231
           DPQS+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKAISYVKFLQ+QVK+LATDEFW
Sbjct: 206 DPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFW 265

Query: 232 PAQDGKVPDISQVKEAIDAIL-LSQRERSSS 262
           PAQ GK PDISQVK+AIDAIL  SQR+R+S+
Sbjct: 266 PAQGGKAPDISQVKDAIDAILSSSQRDRNSN 294

[Close]

BLAST of Sed0027125 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 )

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-18
Identity = 62/159 (38.99%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 76  TWDQQQRLMDDPNCFQTATNNYSISKHNKNGDGSVFEWLYSEVP--VVSDLDHDDEPARE 135
           +WDQ   L +  +  +   +  ++ K N N D +  E   S+    V S+ +  DE    
Sbjct: 83  SWDQSHHLQETSSLKRKLLDVENLCKTNSNCDVTRQELAKSKKKQRVSSESNTVDESNTN 142

Query: 136 FRDQKRPHSGES-SGGICKKQCSDTTKKQKPKSSTANNKDPQSIAAKNRRERISERLKML 195
           + D      G+S S     ++ S T+ K K +++     DPQS+ A+ RRE+I+ERLK L
Sbjct: 143 WVD------GQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTL 202

Query: 196 QELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW 232
           Q LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 203 QNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 235

[Close]

BLAST of Sed0027125 vs. TAIR 10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2 )

HSP 1 Score: 86.3 bits (212), Expect = 4.1e-17
Identity = 42/70 (60.00%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 162 KPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAISYVKFLQLQ 221
           K ++S     DPQS+ A+ RRERI+ERL++LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324

Query: 222 VKILATDEFW 232
           +K+L++D+ W
Sbjct: 325 IKLLSSDDLW 334

[Close]

BLAST of Sed0027125 vs. TAIR 10
Match: AT5G43175.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 9.2e-17
Identity = 45/79 (56.96%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 155 SDTTK--KQKPKSSTANNKDPQSIAAKNRRERISERLKMLQELVPNGSKVDLVTMLEKAI 214
           S+T+K  K+K K++     DPQS+ A+ RRERI++RLK LQ LVPNG+KVD+ TMLE A+
Sbjct: 122 SNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAV 181

Query: 215 SYVKFLQLQVKILATDEFW 232
            YVKFLQLQ+K+L++++ W
Sbjct: 182 HYVKFLQLQIKLLSSEDLW 200

The following BLAST results are available for this feature:

BLAST of Sed0027125 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990966.1	2.4e-91	69.66	putative transcription factor bHLH086 [Cucurbita maxima]	[more]
XP_023528222.1	5.3e-91	69.55	putative transcription factor bHLH086 [Cucurbita pepo subsp. pepo]	[more]
KAG6602034.1	5.3e-91	69.31	putative transcription factor basic helix-loop-helix 86, partial [Cucurbita argy...	[more]
XP_022963447.1	4.5e-90	68.60	putative transcription factor bHLH086 [Cucurbita moschata]	[more]
XP_038907041.1	3.7e-84	66.33	putative transcription factor bHLH086 [Benincasa hispida]	[more]

BLAST of Sed0027125 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ00	6.2e-42	55.91	Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=RSL1 PE...	[more]
Q9C707	3.1e-41	66.23	Transcription factor RHD6 OS=Arabidopsis thaliana OX=3702 GN=RHD6 PE=1 SV=1	[more]
Q8LEG1	3.1e-17	38.99	Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1	[more]
Q84WK0	5.8e-16	60.00	Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1	[more]
Q3E7L7	1.3e-15	56.96	Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=...	[more]

BLAST of Sed0027125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JPE9	1.2e-91	69.66	putative transcription factor bHLH086 OS=Cucurbita maxima OX=3661 GN=LOC11148770...	[more]
A0A6J1HFA4	2.2e-90	68.60	putative transcription factor bHLH086 OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A6J1CJS8	6.8e-84	69.05	putative transcription factor bHLH086 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A0A0KN55	2.5e-78	64.43	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420280 PE=4 S...	[more]
A0A1S3CCR8	8.0e-77	63.85	putative transcription factor bHLH086 OS=Cucumis melo OX=3656 GN=LOC103499318 PE...	[more]

BLAST of Sed0027125 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37800.1	4.4e-43	55.91	RHD SIX-LIKE 1	[more]
AT1G66470.1	2.2e-42	66.23	ROOT HAIR DEFECTIVE6	[more]
AT1G27740.1	2.2e-18	38.99	root hair defective 6-like 4	[more]
AT4G33880.1	4.1e-17	60.00	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]
AT5G43175.1	9.2e-17	56.96	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 175..224 e-value: 7.9E-12 score: 55.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 177..219 e-value: 1.3E-7 score: 31.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 169..218 score: 15.154443
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 164..226 e-value: 1.7E-11 score: 45.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 169..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..175
None	No IPR available	PANTHER	PTHR16223:SF9	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 19..259
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 19..259
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 171..232 e-value: 5.97339E-35 score: 118.263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027125.1	Sed0027125.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding