Sed0026948 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGGGAAGTTTATAAGAGCATGTGCAAACAAATGGAGGAAGATAGGGAGCAAAGTTGTACCTTGCGCACCCTGCGAGCATTGTTGCCAATGGGTGTTGTGGTCTCCCTTGCATGACGATTGCTTCATTCCACGAGACGTCCCGAAGGGTCACTTGGTCGTTTACGTGGGTGCAAATTATACAAGGTTTGTAATCAAAATCAGCCTTCTCAATCACCCTCTGTTCAAGGCATTGCTGGATCAAGCAAAAGATGAGTTTGATTTCACTGCAAACTCAAAACTCTGCATTCCTTGTGATGTGAACCTCTTTCTTAGTGTTGTCCGCCGTGCTAGCTCGCCTGATAGCCGACAAATCCCTCTCTGTCTTTGA ATGAAGGGGAAGTTTATAAGAGCATGTGCAAACAAATGGAGGAAGATAGGGAGCAAAGTTGTACCTTGCGCACCCTGCGAGCATTGTTGCCAATGGGTGTTGTGGTCTCCCTTGCATGACGATTGCTTCATTCCACGAGACGTCCCGAAGGGTCACTTGGTCGTTTACGTGGGTGCAAATTATACAAGGTTTGTAATCAAAATCAGCCTTCTCAATCACCCTCTGTTCAAGGCATTGCTGGATCAAGCAAAAGATGAGTTTGATTTCACTGCAAACTCAAAACTCTGCATTCCTTGTGATGTGAACCTCTTTCTTAGTGTTGTCCGCCGTGCTAGCTCGCCTGATAGCCGACAAATCCCTCTCTGTCTTTGA ATGAAGGGGAAGTTTATAAGAGCATGTGCAAACAAATGGAGGAAGATAGGGAGCAAAGTTGTACCTTGCGCACCCTGCGAGCATTGTTGCCAATGGGTGTTGTGGTCTCCCTTGCATGACGATTGCTTCATTCCACGAGACGTCCCGAAGGGTCACTTGGTCGTTTACGTGGGTGCAAATTATACAAGGTTTGTAATCAAAATCAGCCTTCTCAATCACCCTCTGTTCAAGGCATTGCTGGATCAAGCAAAAGATGAGTTTGATTTCACTGCAAACTCAAAACTCTGCATTCCTTGTGATGTGAACCTCTTTCTTAGTGTTGTCCGCCGTGCTAGCTCGCCTGATAGCCGACAAATCCCTCTCTGTCTTTGA MKGKFIRACANKWRKIGSKVVPCAPCEHCCQWVLWSPLHDDCFIPRDVPKGHLVVYVGANYTRFVIKISLLNHPLFKALLDQAKDEFDFTANSKLCIPCDVNLFLSVVRRASSPDSRQIPLCL Homology
BLAST of Sed0026948 vs. NCBI nr
Match: XP_038883934.1 (auxin-responsive protein SAUR50 [Benincasa hispida]) HSP 1 Score: 244.2 bits (622), Expect = 5.9e-61 Identity = 111/122 (90.98%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of Sed0026948 vs. NCBI nr
Match: XP_016900724.1 (PREDICTED: indole-3-acetic acid-induced protein ARG7 [Cucumis melo] >XP_031742593.1 indole-3-acetic acid-induced protein ARG7 [Cucumis sativus]) HSP 1 Score: 240.4 bits (612), Expect = 8.5e-60 Identity = 109/122 (89.34%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of Sed0026948 vs. NCBI nr
Match: KAG6595237.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 240.0 bits (611), Expect = 1.1e-59 Identity = 107/114 (93.86%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of Sed0026948 vs. NCBI nr
Match: XP_022963217.1 (auxin-induced protein 15A [Cucurbita moschata]) HSP 1 Score: 238.0 bits (606), Expect = 4.2e-59 Identity = 106/114 (92.98%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of Sed0026948 vs. NCBI nr
Match: KAG6604414.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034565.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 237.3 bits (604), Expect = 7.2e-59 Identity = 108/123 (87.80%), Postives = 112/123 (91.06%), Query Frame = 0
BLAST of Sed0026948 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12 Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 0
BLAST of Sed0026948 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.4e-12 Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of Sed0026948 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.6e-11 Identity = 31/65 (47.69%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of Sed0026948 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Sed0026948 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.2e-09 Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of Sed0026948 vs. ExPASy TrEMBL
Match: A0A1S4DXL1 (indole-3-acetic acid-induced protein ARG7 OS=Cucumis melo OX=3656 GN=LOC103491168 PE=3 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 4.1e-60 Identity = 109/122 (89.34%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of Sed0026948 vs. ExPASy TrEMBL
Match: A0A6J1HEL5 (auxin-induced protein 15A OS=Cucurbita moschata OX=3662 GN=LOC111463496 PE=3 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.0e-59 Identity = 106/114 (92.98%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of Sed0026948 vs. ExPASy TrEMBL
Match: A0A6J1I941 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111471142 PE=3 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 2.9e-58 Identity = 104/113 (92.04%), Postives = 108/113 (95.58%), Query Frame = 0
BLAST of Sed0026948 vs. ExPASy TrEMBL
Match: A0A6J1CQ37 (uncharacterized protein LOC111013697 OS=Momordica charantia OX=3673 GN=LOC111013697 PE=3 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.6e-54 Identity = 99/112 (88.39%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Sed0026948 vs. ExPASy TrEMBL
Match: A0A2N9EJG5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2777 PE=3 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.6e-51 Identity = 92/123 (74.80%), Postives = 105/123 (85.37%), Query Frame = 0
BLAST of Sed0026948 vs. TAIR 10
Match: AT2G37030.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 142.1 bits (357), Expect = 2.9e-34 Identity = 67/124 (54.03%), Postives = 89/124 (71.77%), Query Frame = 0
BLAST of Sed0026948 vs. TAIR 10
Match: AT3G53250.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 115.5 bits (288), Expect = 2.9e-26 Identity = 57/106 (53.77%), Postives = 75/106 (70.75%), Query Frame = 0
BLAST of Sed0026948 vs. TAIR 10
Match: AT5G03310.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 94.0 bits (232), Expect = 9.2e-20 Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 0
BLAST of Sed0026948 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 78.6 bits (192), Expect = 4.0e-15 Identity = 37/76 (48.68%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of Sed0026948 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14 Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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