Sed0026863 (gene) Chayote v1

Overview
NameSed0026863
Typegene
OrganismSechium edule (Chayote v1)
DescriptionDeoxyhypusine synthase
LocationLG13: 5744775 .. 5745482 (-)
RNA-Seq ExpressionSed0026863
SyntenySed0026863
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTAGTTTCTCATTCCCTATTGAAAAAAACCCTCCATCGGACGGCGACGGTGACGACAACAACGGTAAAGGCAACATCGATGGGTAATTGCGTGGAAACATTGTCGAGACAACGAGAGGAAGAAGAAGCAGCAACGGCGATAACCGAGGAGGAGAAAGGAGAAAAGAAAGGGAGAGTGAAAATAAAAGTAGTGTTGACAAAAGAAGAGCTACATTGGCTAATGGAGCAAATTGAGGAGAAAGGAGGTAAGGGATTAGAAGAGCTGTTGGAAGAGATTGAGAGAGGAAGAAAAGGAGGAAAAAAAGTATTGAATTATATTGAAGAAGATTATGTAAATAACAATAATGGTAGTTGGAGACCTTCTCTCGAAAGTATTATGGAATGTCCTGAACTTGTTGATCAAATGCAAAGATAGATACAAGCTATTTTTCTCCACTTCTTTTACTTTAGTTTTATAATTTCAAAATAAGTCGTAGCATTTTTTTTCTTCGACTTGATTAGTAGATAAACATTGTTCTTTTTATCTCTCACCCATATTTATAAAAAAAAGTTAGTAAAGTAAACGAGAAATGATCGAATTTATAAGGAAGTATTTTTTAAGATTGATATTTTTTTCTTCGATCTCTCTTAAAGATTAGATCCAGAGATGAAATTTCTTTTATTTATATTTCTCTCTACTTTTAGTTTTATTTTTGGGTGATCAGCTC

mRNA sequence

CCTTAGTTTCTCATTCCCTATTGAAAAAAACCCTCCATCGGACGGCGACGGTGACGACAACAACGGTAAAGGCAACATCGATGGGTAATTGCGTGGAAACATTGTCGAGACAACGAGAGGAAGAAGAAGCAGCAACGGCGATAACCGAGGAGGAGAAAGGAGAAAAGAAAGGGAGAGTGAAAATAAAAGTAGTGTTGACAAAAGAAGAGCTACATTGGCTAATGGAGCAAATTGAGGAGAAAGGAGGTAAGGGATTAGAAGAGCTGTTGGAAGAGATTGAGAGAGGAAGAAAAGGAGGAAAAAAAGTATTGAATTATATTGAAGAAGATTATGTAAATAACAATAATGGTAGTTGGAGACCTTCTCTCGAAAGTATTATGGAATGTCCTGAACTTGTTGATCAAATGCAAAGATAGATACAAGCTATTTTTCTCCACTTCTTTTACTTTAGTTTTATAATTTCAAAATAAGTCGTAGCATTTTTTTTCTTCGACTTGATTAGTAGATAAACATTGTTCTTTTTATCTCTCACCCATATTTATAAAAAAAAGTTAGTAAAGTAAACGAGAAATGATCGAATTTATAAGGAAGTATTTTTTAAGATTGATATTTTTTTCTTCGATCTCTCTTAAAGATTAGATCCAGAGATGAAATTTCTTTTATTTATATTTCTCTCTACTTTTAGTTTTATTTTTGGGTGATCAGCTC

Coding sequence (CDS)

ATGGGTAATTGCGTGGAAACATTGTCGAGACAACGAGAGGAAGAAGAAGCAGCAACGGCGATAACCGAGGAGGAGAAAGGAGAAAAGAAAGGGAGAGTGAAAATAAAAGTAGTGTTGACAAAAGAAGAGCTACATTGGCTAATGGAGCAAATTGAGGAGAAAGGAGGTAAGGGATTAGAAGAGCTGTTGGAAGAGATTGAGAGAGGAAGAAAAGGAGGAAAAAAAGTATTGAATTATATTGAAGAAGATTATGTAAATAACAATAATGGTAGTTGGAGACCTTCTCTCGAAAGTATTATGGAATGTCCTGAACTTGTTGATCAAATGCAAAGATAG

Protein sequence

MGNCVETLSRQREEEEAATAITEEEKGEKKGRVKIKVVLTKEELHWLMEQIEEKGGKGLEELLEEIERGRKGGKKVLNYIEEDYVNNNNGSWRPSLESIMECPELVDQMQR
Homology
BLAST of Sed0026863 vs. NCBI nr
Match: XP_022942038.1 (uncharacterized protein LOC111447226 [Cucurbita moschata])

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-23
Identity = 73/111 (65.77%), Postives = 83/111 (74.77%), Query Frame = 0

Query: 1   MGNCVETLSRQREEEEAATAITEE--EKGEKKGRVKIKVVLTKEELHWLMEQIEEKGGKG 60
           MGNCVE LSR+REEEE  T  T    EK E+KGRV+IKVVLTKEEL WLMEQ++E+GGKG
Sbjct: 1   MGNCVEVLSRRREEEEMTTTATTTIMEKEERKGRVRIKVVLTKEELQWLMEQVQERGGKG 60

Query: 61  LEELLEEIERGRKGGKKVLNYIEEDYVNNNNGSWRPSLESIMECPELVDQM 110
           LEELL EIE GR+  KKV          N +GSWRPSLESIME PE+ D+M
Sbjct: 61  LEELLGEIE-GRR--KKV----------NEDGSWRPSLESIMEVPEVPDRM 98

BLAST of Sed0026863 vs. NCBI nr
Match: XP_023543788.1 (uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-22
Identity = 69/112 (61.61%), Postives = 81/112 (72.32%), Query Frame = 0

Query: 1   MGNCVETLSRQREEE--EAATAITEEEKGEKKGRVKIKVVLTKEELHWLMEQIEEKGGKG 60
           MGNCVE LSR+REEE     T  T  EK E+KG V+IKVVLTKEEL WLMEQ++E+GGKG
Sbjct: 1   MGNCVEVLSRRREEEGTMTTTTTTTMEKEERKGGVRIKVVLTKEELQWLMEQVQERGGKG 60

Query: 61  LEELLEEIERGRKGGKKVLNYIEEDYVNNNNGSWRPSLESIMECPELVDQMQ 111
           LEELL EIER R+        ++ED      GSWRPSLESIME PE+ D+M+
Sbjct: 61  LEELLGEIERRRR-------KVDED------GSWRPSLESIMEVPEVPDRME 99

BLAST of Sed0026863 vs. NCBI nr
Match: KGN53406.1 (hypothetical protein Csa_015211 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 2.8e-22
Identity = 71/113 (62.83%), Postives = 82/113 (72.57%), Query Frame = 0

Query: 1   MGNCVETLSRQREEE--EAATAITEEEKGEKKGRVKIKVVLTKEELHWLMEQIEEKGGKG 60
           MGNCVE LSRQREE+     T+  E E+ EKKG ++IKVVL KEEL WL EQI+EKGGK 
Sbjct: 1   MGNCVEVLSRQREEDGTTTTTSTREMEEREKKGGMRIKVVLRKEELEWLTEQIKEKGGKC 60

Query: 61  LEELLEEIERGRKGGKKVLNYIEEDYVNNNNGSWRPSLESIMECPELVDQMQR 112
           LEELLEEIERGR+  K V+N   +      N SW+PSLESIMECPE+ D M R
Sbjct: 61  LEELLEEIERGRR-EKTVMNCSIQ-----YNVSWKPSLESIMECPEIPDHMFR 107

BLAST of Sed0026863 vs. NCBI nr
Match: KAG7031156.1 (hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112.1 bits (279), Expect = 3.1e-21
Identity = 71/113 (62.83%), Postives = 83/113 (73.45%), Query Frame = 0

Query: 1   MGNCVETLSRQREEEEAAT--AITEEEKGEKK-GRVKIKVVLTKEELHWLMEQIEEKGGK 60
           MGNCVE LSR+ EEEE  T    T  EK E+K G V+IKVVLTKEEL WLMEQ++E+GGK
Sbjct: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60

Query: 61  GLEELLEEIERGRKGGKKVLNYIEEDYVNNNNGSWRPSLESIMECPELVDQMQ 111
           GLEELL EIE GR+  KKV          N +GSWRPSLESIME PE++D+M+
Sbjct: 61  GLEELLGEIE-GRR--KKV----------NEDGSWRPSLESIMEVPEVLDRME 100

BLAST of Sed0026863 vs. NCBI nr
Match: KAG6600517.1 (hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110.9 bits (276), Expect = 7.0e-21
Identity = 71/113 (62.83%), Postives = 82/113 (72.57%), Query Frame = 0

Query: 1   MGNCVETLSRQREEEEAAT--AITEEEKGEKK-GRVKIKVVLTKEELHWLMEQIEEKGGK 60
           MGNCVE LSR+ EEEE  T    T  EK E+K G V+IKVVLTKEEL WLMEQ++E+GGK
Sbjct: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60

Query: 61  GLEELLEEIERGRKGGKKVLNYIEEDYVNNNNGSWRPSLESIMECPELVDQMQ 111
           GLEELL EIE GR+  KKV          N +GSWRPSLESIME PE+ D+M+
Sbjct: 61  GLEELLGEIE-GRR--KKV----------NEDGSWRPSLESIMEVPEVPDRME 100

BLAST of Sed0026863 vs. ExPASy TrEMBL
Match: A0A6J1FTR3 (uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC111447226 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.6e-24
Identity = 73/111 (65.77%), Postives = 83/111 (74.77%), Query Frame = 0

Query: 1   MGNCVETLSRQREEEEAATAITEE--EKGEKKGRVKIKVVLTKEELHWLMEQIEEKGGKG 60
           MGNCVE LSR+REEEE  T  T    EK E+KGRV+IKVVLTKEEL WLMEQ++E+GGKG
Sbjct: 1   MGNCVEVLSRRREEEEMTTTATTTIMEKEERKGRVRIKVVLTKEELQWLMEQVQERGGKG 60

Query: 61  LEELLEEIERGRKGGKKVLNYIEEDYVNNNNGSWRPSLESIMECPELVDQM 110
           LEELL EIE GR+  KKV          N +GSWRPSLESIME PE+ D+M
Sbjct: 61  LEELLGEIE-GRR--KKV----------NEDGSWRPSLESIMEVPEVPDRM 98

BLAST of Sed0026863 vs. ExPASy TrEMBL
Match: A0A0A0KZU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22
Identity = 71/113 (62.83%), Postives = 82/113 (72.57%), Query Frame = 0

Query: 1   MGNCVETLSRQREEE--EAATAITEEEKGEKKGRVKIKVVLTKEELHWLMEQIEEKGGKG 60
           MGNCVE LSRQREE+     T+  E E+ EKKG ++IKVVL KEEL WL EQI+EKGGK 
Sbjct: 1   MGNCVEVLSRQREEDGTTTTTSTREMEEREKKGGMRIKVVLRKEELEWLTEQIKEKGGKC 60

Query: 61  LEELLEEIERGRKGGKKVLNYIEEDYVNNNNGSWRPSLESIMECPELVDQMQR 112
           LEELLEEIERGR+  K V+N   +      N SW+PSLESIMECPE+ D M R
Sbjct: 61  LEELLEEIERGRR-EKTVMNCSIQ-----YNVSWKPSLESIMECPEIPDHMFR 107

BLAST of Sed0026863 vs. ExPASy TrEMBL
Match: A0A6J1C443 (uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008308 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.4e-20
Identity = 67/113 (59.29%), Postives = 82/113 (72.57%), Query Frame = 0

Query: 1   MGNCVETLSRQREEEEAATAITEEEKGEKKGRVKIKVVLTKEELHWLMEQIEEKGGKGLE 60
           MGNCVE + +    EEAA    EEEK E KG ++IKVVLTKEEL WLME I E+GG+ LE
Sbjct: 1   MGNCVEAVWK---PEEAA----EEEKKEMKGGMRIKVVLTKEELEWLMEHINERGGRNLE 60

Query: 61  ELLEE--IERGRKGGKKVLNYIEEDYVNNNNGSWRPSLESIMECPELVDQMQR 112
           +LLEE  IERGR+  +KV++    D+  N + SW+PSLESI+ECPEL D MQR
Sbjct: 61  DLLEEIQIERGRR-SRKVISREALDF--NTSASWKPSLESIVECPELPDHMQR 103

BLAST of Sed0026863 vs. ExPASy TrEMBL
Match: A0A2P6P649 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0194781 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-13
Identity = 54/123 (43.90%), Postives = 81/123 (65.85%), Query Frame = 0

Query: 1   MGNCVETLSRQREEEEAATAITEEEKGE-----------KKGRVKIKVVLTKEELHWLME 60
           MGNC+ET ++ ++EE+    + +++  E           + G++++K+VLTKEEL  LM 
Sbjct: 1   MGNCMETCAQNQQEEDQMQQMQKQKGDEIRFGKEGINSGEDGKLRVKIVLTKEELQMLML 60

Query: 61  QIEEKGG-KGLEELLEEIERGRKGGKKVLNYIEEDYVNNNNGSWRPSLESIMECPELVDQ 112
           Q+++KGG K LEE+LEEI++GR  GK VL  +EE        +W+PSL+SIMECPEL + 
Sbjct: 61  QLQDKGGKKSLEEVLEEIQKGR--GKLVL--VEE--------AWKPSLDSIMECPELFED 111

BLAST of Sed0026863 vs. ExPASy TrEMBL
Match: A0A5E4GAQ3 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B006467 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.9e-13
Identity = 53/124 (42.74%), Postives = 72/124 (58.06%), Query Frame = 0

Query: 1   MGNCVETLS-------------RQREEEEAATAITEEEKGEKKGRVKIKVVLTKEELHWL 60
           MGNCVET +              ++EE +      +E    K G V++K+VLTKEEL WL
Sbjct: 1   MGNCVETCTERQQGEDQMQQQKHEQEERQNEIRFVKESNLSKDGNVRVKIVLTKEELEWL 60

Query: 61  MEQIEEKGGKGLEELLEEIERGRKGGKKVLNYIEEDYVNNNNGSWRPSLESIMECPELVD 112
           M Q++++GGK LE++LEEI+R R         +EE         W+PSLESIMECPE V+
Sbjct: 61  MLQLKDRGGKSLEDVLEEIQRSRA-------KVEE--------GWKPSLESIMECPE-VN 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022942038.11.2e-2365.77uncharacterized protein LOC111447226 [Cucurbita moschata][more]
XP_023543788.11.7e-2261.61uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo][more]
KGN53406.12.8e-2262.83hypothetical protein Csa_015211 [Cucumis sativus][more]
KAG7031156.13.1e-2162.83hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6600517.17.0e-2162.83hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FTR35.6e-2465.77uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC1114472... [more]
A0A0A0KZU91.4e-2262.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1[more]
A0A6J1C4436.4e-2059.29uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A2P6P6491.5e-1343.90Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0194781 PE=4... [more]
A0A5E4GAQ39.9e-1342.74Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B006467 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..26
NoneNo IPR availablePANTHERPTHR35704:SF1OS02G0254600 PROTEINcoord: 1..110
NoneNo IPR availablePANTHERPTHR35704OS02G0254600 PROTEINcoord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0026863.1Sed0026863.1mRNA