Sed0026736 (gene) Chayote v1

Overview
NameSed0026736
Typegene
OrganismSechium edule (Chayote v1)
DescriptionCyclin
LocationLG04: 35545754 .. 35547768 (-)
RNA-Seq ExpressionSed0026736
SyntenySed0026736
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACCACCTCACCGACTCTTTATATTTACTAAAACACACACAACAAGAGCAAAAAACTTTTACACAAACAAAACAGCAAAACCAACAAAGCAAAAAAGAGAAAGAAAGGACCCTCTTCAATGGTAGAAGAAGAAAGGCCTCCAAAGCTCATCACTTTCCTCTCTTCTGTGCTTCAAAGAGTGGCCGAATCGAATGACTATCACGTCGAAAAAGGCTCGGCCACCGAAACACAAAAGAACTCGGGGTTCCATGGCTTGACTCGCCCATCAATCTCTCTTCAAACTTACCTGGAAAGGATCTTCAAGTATGCCAATTGTAGCAACTCTTGCTTCATTGTTGCTTATATTTATCTCGATCGCTTCGCTCAAAGGCAACCATTGTTGCCCATCAACTCTAACAATGTTCATCGTTTGCTCATTACAAGTGTTCTTCTTGCTGCCAAGTTCATGGATGATCTGTAAGTTAATTTTCAACTTTATTTTTTCTTAACTAGTTTTGAATTTGATTAGTTTATCACTTCTATGAAGCAATAATTTAATGAGTGGAAAAAAAAATTTATCTTAATTTTTTAATGGTAGGAATTGATTTCTTTTATTTTAATAATGAGAGTTTTTTTTTTGAGAAATTTAATAATGAGAGTTAGGAACTTCAATGTCCATGGCCGACCACTTTACACTTATCTTAGGAGTGGAGACTTTGTGTCGGATGTGTTTGGATAGCTATTTTATGAAGTGTAATACTTACTACTTAATTACCAACATATAAATAATATTGTGCCATTTGGTAATTGCCAATGTATTATGTGTCAAATTATCTTTTTATAGATATATATATATATATATATATATATATATATATATATACATATACTTATGTGGCATAATATTATCTTTATAAGTGTTGGTAAGTATGTTTAAGATACACAGTGGTAAGTTGGTAAGTATTAATTGTTTATATAAAGGAGTTACTCAACATGGAGAAAATTCTCCTAAACTCTTATAAATCTCTCAAGTATAATATTATCTCTAATTGAACCATAATGAGTGGTAAGTTGGTAAGTATTAATTGTTTATATAAAGGAGTTACTCAACATCATATTTGGATGGAGAAAACTCTCCTAAACTCTTATAAATCTCTCAAGTATAATATTATCTCTAATTGAACCATAATGAATTTTTTTTTGAGGAGACGTTTTCAACTTATTCATATTCAGGGTTGAAATGTTACTAATTATTGATCTTAATTTTTGGTTTTCAGGTGTTACAACAATGCTTTCTATGCAAGAGTGGGAGGAATCAGCACAAAAGAAATAAACTTTCTTGAATTGGATTTCCTCTTTGGATTAGGGTTTCACTTGAATGTGACACCCAACACTTTCCACACTTATTGCTCTTGTTTACAAAAAGAGATGCTACTACTAAACCCTCCTCTAAATGCTCTATTAGCTTCTTCTGATCAAATGCCCTTTGATAAAAAAAATCATTTGGGCTCAGAAGAAGATGAAGCTACTCGTTATCAAAAGCAACAACAAATAGTCATTTAAATTAAAGTGGGGTTTGTCCAACAATATTATCCTAGTCTAAAAAATTGCTTGTTTGAATCGTTTCAAATATTGTTATAGTACTAAAACTAATGTACATATATTGGAACCCTTTTGATTGGCAAGTAATGAGAGGGTGTGATGTGAAATGTTTCAAAATATCATGATTTAGCTGTAAGTTGGGTGATAATATTTTGGCTTGAAAGTGAGGGAATTTTTTTTTAATGGTCAATGTTAGAAGGAAATTTAGAGGATGACAGTGACAAGTGATAGAAGTACACATGACTTTTTATATTTGTGATTCACTTTTTTGCTGTCTAAATGACAATTTGTTCTATTTGACAGTTGTACCCATTCAGCAAAGTGGACAGAAAAACATGTGCCATAAAGAGATTGAGAGAGATACATTTTGTGGCCAATATATGCTTGAAACTATTTATTTTAGGGAAGGAGAGAGAAATTGTTTTGAGAATTAA

mRNA sequence

CACCACCTCACCGACTCTTTATATTTACTAAAACACACACAACAAGAGCAAAAAACTTTTACACAAACAAAACAGCAAAACCAACAAAGCAAAAAAGAGAAAGAAAGGACCCTCTTCAATGGTAGAAGAAGAAAGGCCTCCAAAGCTCATCACTTTCCTCTCTTCTGTGCTTCAAAGAGTGGCCGAATCGAATGACTATCACGTCGAAAAAGGCTCGGCCACCGAAACACAAAAGAACTCGGGGTTCCATGGCTTGACTCGCCCATCAATCTCTCTTCAAACTTACCTGGAAAGGATCTTCAAGTATGCCAATTGTAGCAACTCTTGCTTCATTGTTGCTTATATTTATCTCGATCGCTTCGCTCAAAGGCAACCATTGTTGCCCATCAACTCTAACAATGTTCATCGTTTGCTCATTACAAGTGTTCTTCTTGCTGCCAAGTTCATGGATGATCTGTGTTACAACAATGCTTTCTATGCAAGAGTGGGAGGAATCAGCACAAAAGAAATAAACTTTCTTGAATTGGATTTCCTCTTTGGATTAGGGTTTCACTTGAATGTGACACCCAACACTTTCCACACTTATTGCTCTTGTTTACAAAAAGAGATGCTACTACTAAACCCTCCTCTAAATGCTCTATTAGCTTCTTCTGATCAAATGCCCTTTGATAAAAAAAATCATTTGGGCTCAGAAGAAGATGAAGCTACTCGTTATCAAAAGCAACAACAAATAGTCATTTAAATTAAAGTGGGGTTTGTCCAACAATATTATCCTAGTCTAAAAAATTGCTTGTTTGAATCGTTTCAAATATTGTTATAGTACTAAAACTAATGTACATATATTGGAACCCTTTTGATTGGCAAGTAATGAGAGGGTGTGATGTGAAATGTTTCAAAATATCATGATTTAGCTGTAAGTTGGGTGATAATATTTTGGCTTGAAAGTGAGGGAATTTTTTTTTAATGGTCAATGTTAGAAGGAAATTTAGAGGATGACAGTGACAAGTGATAGAAGTACACATGACTTTTTATATTTGTGATTCACTTTTTTGCTGTCTAAATGACAATTTGTTCTATTTGACAGTTGTACCCATTCAGCAAAGTGGACAGAAAAACATGTGCCATAAAGAGATTGAGAGAGATACATTTTGTGGCCAATATATGCTTGAAACTATTTATTTTAGGGAAGGAGAGAGAAATTGTTTTGAGAATTAA

Coding sequence (CDS)

ATGGTAGAAGAAGAAAGGCCTCCAAAGCTCATCACTTTCCTCTCTTCTGTGCTTCAAAGAGTGGCCGAATCGAATGACTATCACGTCGAAAAAGGCTCGGCCACCGAAACACAAAAGAACTCGGGGTTCCATGGCTTGACTCGCCCATCAATCTCTCTTCAAACTTACCTGGAAAGGATCTTCAAGTATGCCAATTGTAGCAACTCTTGCTTCATTGTTGCTTATATTTATCTCGATCGCTTCGCTCAAAGGCAACCATTGTTGCCCATCAACTCTAACAATGTTCATCGTTTGCTCATTACAAGTGTTCTTCTTGCTGCCAAGTTCATGGATGATCTGTGTTACAACAATGCTTTCTATGCAAGAGTGGGAGGAATCAGCACAAAAGAAATAAACTTTCTTGAATTGGATTTCCTCTTTGGATTAGGGTTTCACTTGAATGTGACACCCAACACTTTCCACACTTATTGCTCTTGTTTACAAAAAGAGATGCTACTACTAAACCCTCCTCTAAATGCTCTATTAGCTTCTTCTGATCAAATGCCCTTTGATAAAAAAAATCATTTGGGCTCAGAAGAAGATGAAGCTACTCGTTATCAAAAGCAACAACAAATAGTCATTTAA

Protein sequence

MVEEERPPKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYLERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNNAFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLASSDQMPFDKKNHLGSEEDEATRYQKQQQIVI
Homology
BLAST of Sed0026736 vs. NCBI nr
Match: XP_023548896.1 (cyclin-U4-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 329.3 bits (843), Expect = 2.3e-86
Identity = 167/208 (80.29%), Postives = 179/208 (86.06%), Query Frame = 0

Query: 1   MVEEERP---PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYL 60
           MVEEE     PKLITFLSSVLQRVAESND  V+  SA ETQKNS FHGLTRPSISL TYL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNN 120
           ERIFKYANCSNSCFIVAY+YLDRFAQRQPLLPINS NVHRLLITSVL+AAKFMDDLCYNN
Sbjct: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 AFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLAS 180
            FYARVGGISTKEINFLE+DFLFGLGFHLNVTPNTFHTYCSCL KEMLLL PPL+  L +
Sbjct: 121 GFYARVGGISTKEINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLLLKPPLSNSLLT 180

Query: 181 SDQMPFDKKNHLGSEEDEATRYQKQQQI 206
           S +   +K +HL  EEDEA+ +Q Q Q+
Sbjct: 181 SSETSLNKASHLSFEEDEASHHQNQHQV 208

BLAST of Sed0026736 vs. NCBI nr
Match: XP_023006685.1 (cyclin-U4-1-like [Cucurbita maxima])

HSP 1 Score: 327.0 bits (837), Expect = 1.2e-85
Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0

Query: 1   MVEEERP---PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYL 60
           MVEEE     PKLITFLSSVLQRVAESND  V+  SA ETQKNS FHGLTRPSISL TYL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDNLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNN 120
           ERIFKY NCSNSCFIVAY+YLDRFAQRQPLLPINS NVHRLLITSVL+AAKFMDDLCYNN
Sbjct: 61  ERIFKYVNCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 AFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLAS 180
            FYARVGGIST+EINFLE+DFLFGLGFHLNVTPNTFHTYCSCL KEMLLL PPL+  L +
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLLLKPPLSNSLLT 180

Query: 181 SDQMPFDKKNHLGSEEDEATRYQKQQQI 206
           S +   +K +HL  EEDEA+ +Q Q Q+
Sbjct: 181 SSETSLNKASHLSFEEDEASHHQNQHQV 208

BLAST of Sed0026736 vs. NCBI nr
Match: XP_022958930.1 (cyclin-U4-1-like [Cucurbita moschata])

HSP 1 Score: 325.9 bits (834), Expect = 2.6e-85
Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0

Query: 1   MVEEERP---PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYL 60
           MVEEE     PKLITFLSSVLQRVAESND  V+  SA ETQKNS FHGLTRPSISL TYL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNN 120
           ERIFKYANCSNSCFIVAY+YLDRFAQRQPLLPINS NVHRLLITSVL+AAKFMDDLCYNN
Sbjct: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 AFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLAS 180
            FYARVGGIST+EINFLE+DFLFGLGFHLNVTPNTFHTYCSCL KEML L PPL+  L +
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180

Query: 181 SDQMPFDKKNHLGSEEDEATRYQKQQQI 206
           S +   +K +HL  EEDEA+ +Q Q Q+
Sbjct: 181 SSETSLNKASHLSFEEDEASHHQNQHQV 208

BLAST of Sed0026736 vs. NCBI nr
Match: KAG6574814.1 (Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 325.5 bits (833), Expect = 3.4e-85
Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0

Query: 1   MVEEERP---PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYL 60
           MVEEE     PKLITFLSSVLQRVAESND  V+  SA ETQKNS FHGLTRPSISL TYL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNN 120
           ERIFKYANCSNSCFIVAY+YLDRFAQRQPLLPINS NVHRLLITSVL+AAKFMDDLCYNN
Sbjct: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 AFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLAS 180
            FYARVGGIST+EINFLE+DFLFGLGFHLNVTPNTFHTYCSCL KEML L PPL+  L +
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180

Query: 181 SDQMPFDKKNHLGSEEDEATRYQKQQQI 206
           S +   +K +HL  EEDEA+ +Q Q Q+
Sbjct: 181 SSETSLNKASHLSFEEDEASHHQNQHQL 208

BLAST of Sed0026736 vs. NCBI nr
Match: XP_038906836.1 (cyclin-U4-1-like [Benincasa hispida])

HSP 1 Score: 302.8 bits (774), Expect = 2.3e-78
Identity = 159/210 (75.71%), Postives = 172/210 (81.90%), Query Frame = 0

Query: 1   MVEEERP----PKLITFLSSVLQRVAESN-DYHVEKGSATETQKNSGFHGLTRPSISLQT 60
           MVEEE      PKLITFLSS+LQRVAESN D   E  SATETQKNS FHGLTRPSISLQ+
Sbjct: 1   MVEEESTSSMMPKLITFLSSLLQRVAESNDDLDNENNSATETQKNSAFHGLTRPSISLQS 60

Query: 61  YLERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCY 120
           YLERIFKYANCSNSCFIVAY+YLDRFAQRQPLLPINS NVHRLLITSVL+AAKFMDD CY
Sbjct: 61  YLERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDSCY 120

Query: 121 NNAFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALL 180
           NNAFYARVGGIST+EINFLE+DFLFGLGFHLNVTP TFHTY SCLQKEMLLLNPP N + 
Sbjct: 121 NNAFYARVGGISTREINFLEVDFLFGLGFHLNVTPTTFHTYSSCLQKEMLLLNPPFNNIS 180

Query: 181 ASSDQMPFDKKNHLGSEEDEATRYQKQQQI 206
            S+             +E  ++ +Q QQQ+
Sbjct: 181 QSTSLNNKTLFITFQQDEPNSSHHQSQQQL 210

BLAST of Sed0026736 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.5e-64
Identity = 132/207 (63.77%), Postives = 162/207 (78.26%), Query Frame = 0

Query: 1   MVEEERP---PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYL 60
           M E E P    KLI FLSS+L+RVAESND  + +  AT++Q+ S FHGL+RP+I++Q+YL
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESND--LTRRVATQSQRVSVFHGLSRPTITIQSYL 60

Query: 61  ERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNN 120
           ERIFKYANCS SCF+VAY+YLDRF  RQP LPINS NVHRLLITSV++AAKF+DDL YNN
Sbjct: 61  ERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNN 120

Query: 121 AFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLAS 180
           A+YA+VGGISTKE+NFLELDFLFGLGF LNVTPNTF+ Y S LQKEM LL P    ++ S
Sbjct: 121 AYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVVPS 180

Query: 181 SDQMPFDKKNHLGSEEDEATRYQKQQQ 205
           S       ++ +   +DEA+  ++QQQ
Sbjct: 181 S-------RSLITFNDDEASHQKQQQQ 198

BLAST of Sed0026736 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.5e-56
Identity = 106/171 (61.99%), Postives = 143/171 (83.63%), Query Frame = 0

Query: 1   MVEEERP-----PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQT 60
           M+ ++ P     P +IT +SS+LQRV+E+ND         E ++ S F+ +T+PSIS+++
Sbjct: 9   MIHDQEPMAEIMPNVITAMSSLLQRVSETND--DLSRPFREHKRISAFNAVTKPSISIRS 68

Query: 61  YLERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCY 120
           Y+ERIFKYA+CS+SC+IVAYIYLDRF Q+QPLLPI+S+NVHRL+ITSVL++AKFMDDLCY
Sbjct: 69  YMERIFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCY 128

Query: 121 NNAFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLL 167
           NNAFYA+VGGI+T+E+N LELDFLFG+GF LNVT +T++ YCS LQ+EM++
Sbjct: 129 NNAFYAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVM 177

BLAST of Sed0026736 vs. ExPASy Swiss-Prot
Match: Q9FKF6 (Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.2e-54
Identity = 109/201 (54.23%), Postives = 146/201 (72.64%), Query Frame = 0

Query: 8   PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYLERIFKYANCS 67
           P ++T +S +LQRV+E+ND      + ++ QK S F G+T+PSIS+++YLERIF+YANCS
Sbjct: 23  PSVLTAMSYLLQRVSETND------NLSQKQKPSSFTGVTKPSISIRSYLERIFEYANCS 82

Query: 68  NSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNNAFYARVGGIS 127
            SC+IVAYIYLDRF ++QP LPINS NVHRL+ITSVL++AKFMDDL YNN +YA+VGGIS
Sbjct: 83  YSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGIS 142

Query: 128 TKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLASSDQMPFDKKN 187
            +E+N LELDFLFG+GF LNVT +TF+ YC  LQ+EM +L   + +L           K 
Sbjct: 143 REEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAML-MKMKSLFLEPSSFKISSKT 202

Query: 188 HL---GSEEDEATRYQKQQQI 206
            L     EED  + +  ++Q+
Sbjct: 203 KLVMYPHEEDSLSTHHNKKQL 216

BLAST of Sed0026736 vs. ExPASy Swiss-Prot
Match: Q7XC35 (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 8.7e-52
Identity = 108/201 (53.73%), Postives = 138/201 (68.66%), Query Frame = 0

Query: 5   ERPPKLITFLSSVLQRVAESNDYHVEKGS-ATETQKNSGFHGLTRPSISLQTYLERIFKY 64
           E  P+++  LSS+LQRVAE ND      +   E    S F GLT+P+IS+  YLERIF++
Sbjct: 8   EAVPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLERIFRF 67

Query: 65  ANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNNAFYARV 124
           ANCS SC++VAYIYLDRF +R+P L ++S NVHRLLITSVL A KF+DD+CYNNA++ARV
Sbjct: 68  ANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDDICYNNAYFARV 127

Query: 125 GGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLASSDQMPF 184
           GGIS  E+N+LE+DFLFG+ F LNVTP  F +YC+ LQ EM  L  P    L      P 
Sbjct: 128 GGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEMTYLEQPPAVDLPRLHCCP- 187

Query: 185 DKKNHLGSEEDEATRYQKQQQ 205
                  S++D+A  + KQQQ
Sbjct: 188 -------SDQDDAGCHHKQQQ 200

BLAST of Sed0026736 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.1e-36
Identity = 73/163 (44.79%), Postives = 109/163 (66.87%), Query Frame = 0

Query: 4   EERPPKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYLERIFKY 63
           E   P+++T +S V++++   N++ + K +    +    FHG+  PSIS+  YLERI+KY
Sbjct: 21  EAATPRVLTIISHVMEKLVARNEW-LAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKY 80

Query: 64  ANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNNAFYARV 123
             CS +CF+V Y+Y+DR A + P   + S NVHRLL+T V++AAK +DD+ YNN FYARV
Sbjct: 81  TKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARV 140

Query: 124 GGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLL 167
           GG+S  ++N +EL+ LF L F + V+   F +YC  L+KEM L
Sbjct: 141 GGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL 182

BLAST of Sed0026736 vs. ExPASy TrEMBL
Match: A0A6J1L0U3 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499346 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.6e-86
Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0

Query: 1   MVEEERP---PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYL 60
           MVEEE     PKLITFLSSVLQRVAESND  V+  SA ETQKNS FHGLTRPSISL TYL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDNLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNN 120
           ERIFKY NCSNSCFIVAY+YLDRFAQRQPLLPINS NVHRLLITSVL+AAKFMDDLCYNN
Sbjct: 61  ERIFKYVNCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 AFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLAS 180
            FYARVGGIST+EINFLE+DFLFGLGFHLNVTPNTFHTYCSCL KEMLLL PPL+  L +
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLLLKPPLSNSLLT 180

Query: 181 SDQMPFDKKNHLGSEEDEATRYQKQQQI 206
           S +   +K +HL  EEDEA+ +Q Q Q+
Sbjct: 181 SSETSLNKASHLSFEEDEASHHQNQHQV 208

BLAST of Sed0026736 vs. ExPASy TrEMBL
Match: A0A6J1H4V3 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111460076 PE=3 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.3e-85
Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0

Query: 1   MVEEERP---PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYL 60
           MVEEE     PKLITFLSSVLQRVAESND  V+  SA ETQKNS FHGLTRPSISL TYL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNN 120
           ERIFKYANCSNSCFIVAY+YLDRFAQRQPLLPINS NVHRLLITSVL+AAKFMDDLCYNN
Sbjct: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 AFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLAS 180
            FYARVGGIST+EINFLE+DFLFGLGFHLNVTPNTFHTYCSCL KEML L PPL+  L +
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180

Query: 181 SDQMPFDKKNHLGSEEDEATRYQKQQQI 206
           S +   +K +HL  EEDEA+ +Q Q Q+
Sbjct: 181 SSETSLNKASHLSFEEDEASHHQNQHQV 208

BLAST of Sed0026736 vs. ExPASy TrEMBL
Match: A0A6J1DQ51 (Cyclin OS=Momordica charantia OX=3673 GN=LOC111022783 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 9.0e-76
Identity = 156/206 (75.73%), Postives = 169/206 (82.04%), Query Frame = 0

Query: 1   MVEEERP---PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYL 60
           MVE E     PKLITFLSSVLQRVAESND H++  SA ETQK+S FHGLTRP ISL +YL
Sbjct: 1   MVEGESTSMMPKLITFLSSVLQRVAESND-HLD--SAIETQKSSAFHGLTRPGISLHSYL 60

Query: 61  ERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNN 120
           ERI KYANCSNSCFIVAY+YLDRFAQRQPLLPINS NVHRLLITSVL+AAKFMDD CYNN
Sbjct: 61  ERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNN 120

Query: 121 AFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLAS 180
           AFYARVGGIST EINFLE+DFLFGLGFHLNVTPNTFHTYCS LQKEMLL  PPL + + S
Sbjct: 121 AFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITS 180

Query: 181 SDQMPFD-KKNHLGSEEDEATRYQKQ 203
                   K  +L  EEDE++  Q+Q
Sbjct: 181 ITSSEISLKTKYLSFEEDESSHQQQQ 203

BLAST of Sed0026736 vs. ExPASy TrEMBL
Match: A0A0A0KER4 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G078670 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.2e-75
Identity = 148/186 (79.57%), Postives = 159/186 (85.48%), Query Frame = 0

Query: 1   MVEEERP----PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTY 60
           MVE+E      PKLITFLSSVLQRVAESND      SATETQKNS FHGLTRPSISLQ+Y
Sbjct: 1   MVEQESTSCSMPKLITFLSSVLQRVAESNDDLDNNDSATETQKNSAFHGLTRPSISLQSY 60

Query: 61  LERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYN 120
           LERIFKYANCSNSCFIVAY+YLDRFAQ+QPLLPINS NVHRLLITSVL+AAKFMDDLCYN
Sbjct: 61  LERIFKYANCSNSCFIVAYVYLDRFAQKQPLLPINSYNVHRLLITSVLVAAKFMDDLCYN 120

Query: 121 NAFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLA 180
           NAFYARVGGIST+EINFLE+DFLFGLGF LNVTP TFHTY SCLQ E+ LLNPP   +  
Sbjct: 121 NAFYARVGGISTREINFLEVDFLFGLGFELNVTPTTFHTYSSCLQNEIFLLNPPFTNISI 180

Query: 181 SSDQMP 183
            +  +P
Sbjct: 181 LAPPLP 186

BLAST of Sed0026736 vs. ExPASy TrEMBL
Match: A0A1S4E2M4 (cyclin-U4-1-like OS=Cucumis melo OX=3656 GN=LOC103498997 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.8e-74
Identity = 145/177 (81.92%), Postives = 155/177 (87.57%), Query Frame = 0

Query: 1   MVEEERP-----PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQT 60
           MVE E       PKLITFLSSVLQRVAESND   +   ATETQKNS FHGLTRPSISLQ+
Sbjct: 120 MVEAEESTSCSMPKLITFLSSVLQRVAESNDDLDDNDLATETQKNSAFHGLTRPSISLQS 179

Query: 61  YLERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCY 120
           YLERIFKYANCSNSCFIVAY+YLDRFAQ+QPLLPINS NVHRLLITSVL+AAKFMDDLCY
Sbjct: 180 YLERIFKYANCSNSCFIVAYVYLDRFAQKQPLLPINSYNVHRLLITSVLVAAKFMDDLCY 239

Query: 121 NNAFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLN 173
           NNAFYARVGGIST+EINFLE+DFLFGLGF LNVTP TFHTY SCLQ E+ LL+PP +
Sbjct: 240 NNAFYARVGGISTREINFLEVDFLFGLGFELNVTPTTFHTYSSCLQNEIFLLHPPFS 296

BLAST of Sed0026736 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-65
Identity = 132/207 (63.77%), Postives = 162/207 (78.26%), Query Frame = 0

Query: 1   MVEEERP---PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYL 60
           M E E P    KLI FLSS+L+RVAESND  + +  AT++Q+ S FHGL+RP+I++Q+YL
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESND--LTRRVATQSQRVSVFHGLSRPTITIQSYL 60

Query: 61  ERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNN 120
           ERIFKYANCS SCF+VAY+YLDRF  RQP LPINS NVHRLLITSV++AAKF+DDL YNN
Sbjct: 61  ERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNN 120

Query: 121 AFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLAS 180
           A+YA+VGGISTKE+NFLELDFLFGLGF LNVTPNTF+ Y S LQKEM LL P    ++ S
Sbjct: 121 AYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVVPS 180

Query: 181 SDQMPFDKKNHLGSEEDEATRYQKQQQ 205
           S       ++ +   +DEA+  ++QQQ
Sbjct: 181 S-------RSLITFNDDEASHQKQQQQ 198

BLAST of Sed0026736 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 219.2 bits (557), Expect = 3.2e-57
Identity = 106/171 (61.99%), Postives = 143/171 (83.63%), Query Frame = 0

Query: 1   MVEEERP-----PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQT 60
           M+ ++ P     P +IT +SS+LQRV+E+ND         E ++ S F+ +T+PSIS+++
Sbjct: 9   MIHDQEPMAEIMPNVITAMSSLLQRVSETND--DLSRPFREHKRISAFNAVTKPSISIRS 68

Query: 61  YLERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCY 120
           Y+ERIFKYA+CS+SC+IVAYIYLDRF Q+QPLLPI+S+NVHRL+ITSVL++AKFMDDLCY
Sbjct: 69  YMERIFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCY 128

Query: 121 NNAFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLL 167
           NNAFYA+VGGI+T+E+N LELDFLFG+GF LNVT +T++ YCS LQ+EM++
Sbjct: 129 NNAFYAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVM 177

BLAST of Sed0026736 vs. TAIR 10
Match: AT5G61650.1 (CYCLIN P4;2 )

HSP 1 Score: 212.6 bits (540), Expect = 3.0e-55
Identity = 109/201 (54.23%), Postives = 146/201 (72.64%), Query Frame = 0

Query: 8   PKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYLERIFKYANCS 67
           P ++T +S +LQRV+E+ND      + ++ QK S F G+T+PSIS+++YLERIF+YANCS
Sbjct: 23  PSVLTAMSYLLQRVSETND------NLSQKQKPSSFTGVTKPSISIRSYLERIFEYANCS 82

Query: 68  NSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNNAFYARVGGIS 127
            SC+IVAYIYLDRF ++QP LPINS NVHRL+ITSVL++AKFMDDL YNN +YA+VGGIS
Sbjct: 83  YSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGIS 142

Query: 128 TKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLASSDQMPFDKKN 187
            +E+N LELDFLFG+GF LNVT +TF+ YC  LQ+EM +L   + +L           K 
Sbjct: 143 REEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAML-MKMKSLFLEPSSFKISSKT 202

Query: 188 HL---GSEEDEATRYQKQQQI 206
            L     EED  + +  ++Q+
Sbjct: 203 KLVMYPHEEDSLSTHHNKKQL 216

BLAST of Sed0026736 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 152.5 bits (384), Expect = 3.6e-37
Identity = 73/163 (44.79%), Postives = 109/163 (66.87%), Query Frame = 0

Query: 4   EERPPKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYLERIFKY 63
           E   P+++T +S V++++   N++ + K +    +    FHG+  PSIS+  YLERI+KY
Sbjct: 21  EAATPRVLTIISHVMEKLVARNEW-LAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKY 80

Query: 64  ANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNNAFYARV 123
             CS +CF+V Y+Y+DR A + P   + S NVHRLL+T V++AAK +DD+ YNN FYARV
Sbjct: 81  TKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARV 140

Query: 124 GGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLL 167
           GG+S  ++N +EL+ LF L F + V+   F +YC  L+KEM L
Sbjct: 141 GGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL 182

BLAST of Sed0026736 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 )

HSP 1 Score: 145.6 bits (366), Expect = 4.5e-35
Identity = 75/159 (47.17%), Postives = 107/159 (67.30%), Query Frame = 0

Query: 5   ERPPKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYLERIFKYA 64
           ++PP +++ LSS L+R    N  H +K         + F G + P IS+  YL+RIFKY+
Sbjct: 29  KKPPTVLSRLSSSLERSLLLN--HDDKILLGSPDSVTVFDGRSPPEISIAHYLDRIFKYS 88

Query: 65  NCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNNAFYARVG 124
            CS SCF++A+IY+D F  +   L +   NVHRL+IT+V+LAAK  DD  +NNA+YARVG
Sbjct: 89  CCSPSCFVIAHIYIDHFLHKTRAL-LKPLNVHRLIITTVMLAAKVFDDRYFNNAYYARVG 148

Query: 125 GISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKE 164
           G++T+E+N LE++ LF L F L V P TFHT+C  L+K+
Sbjct: 149 GVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023548896.12.3e-8680.29cyclin-U4-1-like [Cucurbita pepo subsp. pepo][more]
XP_023006685.11.2e-8579.33cyclin-U4-1-like [Cucurbita maxima][more]
XP_022958930.12.6e-8579.33cyclin-U4-1-like [Cucurbita moschata][more]
KAG6574814.13.4e-8579.33Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_038906836.12.3e-7875.71cyclin-U4-1-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
O805131.5e-6463.77Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1[more]
Q9LY164.5e-5661.99Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1[more]
Q9FKF64.2e-5454.23Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1[more]
Q7XC358.7e-5253.73Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1[more]
Q9LJ455.1e-3644.79Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1L0U35.6e-8679.33Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499346 PE=3 SV=1[more]
A0A6J1H4V31.3e-8579.33Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111460076 PE=3 SV=1[more]
A0A6J1DQ519.0e-7675.73Cyclin OS=Momordica charantia OX=3673 GN=LOC111022783 PE=3 SV=1[more]
A0A0A0KER41.2e-7579.57Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G078670 PE=3 SV=1[more]
A0A1S4E2M43.8e-7481.92cyclin-U4-1-like OS=Cucumis melo OX=3656 GN=LOC103498997 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G44740.11.1e-6563.77cyclin p4;1 [more]
AT5G07450.13.2e-5761.99cyclin p4;3 [more]
AT5G61650.13.0e-5554.23CYCLIN P4;2 [more]
AT3G21870.13.6e-3744.79cyclin p2;1 [more]
AT3G63120.14.5e-3547.17cyclin p1;1 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 2..206
e-value: 9.6E-55
score: 187.4
NoneNo IPR availablePANTHERPTHR15615:SF91CYCLIN-U4-1coord: 6..204
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 6..204
IPR012389Cyclin P/UPIRSFPIRSF027110PREGcoord: 2..206
e-value: 4.4E-75
score: 250.0
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 30..146
e-value: 7.4E-38
score: 130.5
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 55..139
e-value: 5.42402E-5
score: 38.7589
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 53..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0026736.1Sed0026736.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0019901 protein kinase binding