Sed0026736 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCACCTCACCGACTCTTTATATTTACTAAAACACACACAACAAGAGCAAAAAACTTTTACACAAACAAAACAGCAAAACCAACAAAGCAAAAAAGAGAAAGAAAGGACCCTCTTCAATGGTAGAAGAAGAAAGGCCTCCAAAGCTCATCACTTTCCTCTCTTCTGTGCTTCAAAGAGTGGCCGAATCGAATGACTATCACGTCGAAAAAGGCTCGGCCACCGAAACACAAAAGAACTCGGGGTTCCATGGCTTGACTCGCCCATCAATCTCTCTTCAAACTTACCTGGAAAGGATCTTCAAGTATGCCAATTGTAGCAACTCTTGCTTCATTGTTGCTTATATTTATCTCGATCGCTTCGCTCAAAGGCAACCATTGTTGCCCATCAACTCTAACAATGTTCATCGTTTGCTCATTACAAGTGTTCTTCTTGCTGCCAAGTTCATGGATGATCTGTAAGTTAATTTTCAACTTTATTTTTTCTTAACTAGTTTTGAATTTGATTAGTTTATCACTTCTATGAAGCAATAATTTAATGAGTGGAAAAAAAAATTTATCTTAATTTTTTAATGGTAGGAATTGATTTCTTTTATTTTAATAATGAGAGTTTTTTTTTTGAGAAATTTAATAATGAGAGTTAGGAACTTCAATGTCCATGGCCGACCACTTTACACTTATCTTAGGAGTGGAGACTTTGTGTCGGATGTGTTTGGATAGCTATTTTATGAAGTGTAATACTTACTACTTAATTACCAACATATAAATAATATTGTGCCATTTGGTAATTGCCAATGTATTATGTGTCAAATTATCTTTTTATAGATATATATATATATATATATATATATATATATATATATACATATACTTATGTGGCATAATATTATCTTTATAAGTGTTGGTAAGTATGTTTAAGATACACAGTGGTAAGTTGGTAAGTATTAATTGTTTATATAAAGGAGTTACTCAACATGGAGAAAATTCTCCTAAACTCTTATAAATCTCTCAAGTATAATATTATCTCTAATTGAACCATAATGAGTGGTAAGTTGGTAAGTATTAATTGTTTATATAAAGGAGTTACTCAACATCATATTTGGATGGAGAAAACTCTCCTAAACTCTTATAAATCTCTCAAGTATAATATTATCTCTAATTGAACCATAATGAATTTTTTTTTGAGGAGACGTTTTCAACTTATTCATATTCAGGGTTGAAATGTTACTAATTATTGATCTTAATTTTTGGTTTTCAGGTGTTACAACAATGCTTTCTATGCAAGAGTGGGAGGAATCAGCACAAAAGAAATAAACTTTCTTGAATTGGATTTCCTCTTTGGATTAGGGTTTCACTTGAATGTGACACCCAACACTTTCCACACTTATTGCTCTTGTTTACAAAAAGAGATGCTACTACTAAACCCTCCTCTAAATGCTCTATTAGCTTCTTCTGATCAAATGCCCTTTGATAAAAAAAATCATTTGGGCTCAGAAGAAGATGAAGCTACTCGTTATCAAAAGCAACAACAAATAGTCATTTAAATTAAAGTGGGGTTTGTCCAACAATATTATCCTAGTCTAAAAAATTGCTTGTTTGAATCGTTTCAAATATTGTTATAGTACTAAAACTAATGTACATATATTGGAACCCTTTTGATTGGCAAGTAATGAGAGGGTGTGATGTGAAATGTTTCAAAATATCATGATTTAGCTGTAAGTTGGGTGATAATATTTTGGCTTGAAAGTGAGGGAATTTTTTTTTAATGGTCAATGTTAGAAGGAAATTTAGAGGATGACAGTGACAAGTGATAGAAGTACACATGACTTTTTATATTTGTGATTCACTTTTTTGCTGTCTAAATGACAATTTGTTCTATTTGACAGTTGTACCCATTCAGCAAAGTGGACAGAAAAACATGTGCCATAAAGAGATTGAGAGAGATACATTTTGTGGCCAATATATGCTTGAAACTATTTATTTTAGGGAAGGAGAGAGAAATTGTTTTGAGAATTAA CACCACCTCACCGACTCTTTATATTTACTAAAACACACACAACAAGAGCAAAAAACTTTTACACAAACAAAACAGCAAAACCAACAAAGCAAAAAAGAGAAAGAAAGGACCCTCTTCAATGGTAGAAGAAGAAAGGCCTCCAAAGCTCATCACTTTCCTCTCTTCTGTGCTTCAAAGAGTGGCCGAATCGAATGACTATCACGTCGAAAAAGGCTCGGCCACCGAAACACAAAAGAACTCGGGGTTCCATGGCTTGACTCGCCCATCAATCTCTCTTCAAACTTACCTGGAAAGGATCTTCAAGTATGCCAATTGTAGCAACTCTTGCTTCATTGTTGCTTATATTTATCTCGATCGCTTCGCTCAAAGGCAACCATTGTTGCCCATCAACTCTAACAATGTTCATCGTTTGCTCATTACAAGTGTTCTTCTTGCTGCCAAGTTCATGGATGATCTGTGTTACAACAATGCTTTCTATGCAAGAGTGGGAGGAATCAGCACAAAAGAAATAAACTTTCTTGAATTGGATTTCCTCTTTGGATTAGGGTTTCACTTGAATGTGACACCCAACACTTTCCACACTTATTGCTCTTGTTTACAAAAAGAGATGCTACTACTAAACCCTCCTCTAAATGCTCTATTAGCTTCTTCTGATCAAATGCCCTTTGATAAAAAAAATCATTTGGGCTCAGAAGAAGATGAAGCTACTCGTTATCAAAAGCAACAACAAATAGTCATTTAAATTAAAGTGGGGTTTGTCCAACAATATTATCCTAGTCTAAAAAATTGCTTGTTTGAATCGTTTCAAATATTGTTATAGTACTAAAACTAATGTACATATATTGGAACCCTTTTGATTGGCAAGTAATGAGAGGGTGTGATGTGAAATGTTTCAAAATATCATGATTTAGCTGTAAGTTGGGTGATAATATTTTGGCTTGAAAGTGAGGGAATTTTTTTTTAATGGTCAATGTTAGAAGGAAATTTAGAGGATGACAGTGACAAGTGATAGAAGTACACATGACTTTTTATATTTGTGATTCACTTTTTTGCTGTCTAAATGACAATTTGTTCTATTTGACAGTTGTACCCATTCAGCAAAGTGGACAGAAAAACATGTGCCATAAAGAGATTGAGAGAGATACATTTTGTGGCCAATATATGCTTGAAACTATTTATTTTAGGGAAGGAGAGAGAAATTGTTTTGAGAATTAA ATGGTAGAAGAAGAAAGGCCTCCAAAGCTCATCACTTTCCTCTCTTCTGTGCTTCAAAGAGTGGCCGAATCGAATGACTATCACGTCGAAAAAGGCTCGGCCACCGAAACACAAAAGAACTCGGGGTTCCATGGCTTGACTCGCCCATCAATCTCTCTTCAAACTTACCTGGAAAGGATCTTCAAGTATGCCAATTGTAGCAACTCTTGCTTCATTGTTGCTTATATTTATCTCGATCGCTTCGCTCAAAGGCAACCATTGTTGCCCATCAACTCTAACAATGTTCATCGTTTGCTCATTACAAGTGTTCTTCTTGCTGCCAAGTTCATGGATGATCTGTGTTACAACAATGCTTTCTATGCAAGAGTGGGAGGAATCAGCACAAAAGAAATAAACTTTCTTGAATTGGATTTCCTCTTTGGATTAGGGTTTCACTTGAATGTGACACCCAACACTTTCCACACTTATTGCTCTTGTTTACAAAAAGAGATGCTACTACTAAACCCTCCTCTAAATGCTCTATTAGCTTCTTCTGATCAAATGCCCTTTGATAAAAAAAATCATTTGGGCTCAGAAGAAGATGAAGCTACTCGTTATCAAAAGCAACAACAAATAGTCATTTAA MVEEERPPKLITFLSSVLQRVAESNDYHVEKGSATETQKNSGFHGLTRPSISLQTYLERIFKYANCSNSCFIVAYIYLDRFAQRQPLLPINSNNVHRLLITSVLLAAKFMDDLCYNNAFYARVGGISTKEINFLELDFLFGLGFHLNVTPNTFHTYCSCLQKEMLLLNPPLNALLASSDQMPFDKKNHLGSEEDEATRYQKQQQIVI Homology
BLAST of Sed0026736 vs. NCBI nr
Match: XP_023548896.1 (cyclin-U4-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 329.3 bits (843), Expect = 2.3e-86 Identity = 167/208 (80.29%), Postives = 179/208 (86.06%), Query Frame = 0
BLAST of Sed0026736 vs. NCBI nr
Match: XP_023006685.1 (cyclin-U4-1-like [Cucurbita maxima]) HSP 1 Score: 327.0 bits (837), Expect = 1.2e-85 Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0
BLAST of Sed0026736 vs. NCBI nr
Match: XP_022958930.1 (cyclin-U4-1-like [Cucurbita moschata]) HSP 1 Score: 325.9 bits (834), Expect = 2.6e-85 Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0
BLAST of Sed0026736 vs. NCBI nr
Match: KAG6574814.1 (Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 325.5 bits (833), Expect = 3.4e-85 Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0
BLAST of Sed0026736 vs. NCBI nr
Match: XP_038906836.1 (cyclin-U4-1-like [Benincasa hispida]) HSP 1 Score: 302.8 bits (774), Expect = 2.3e-78 Identity = 159/210 (75.71%), Postives = 172/210 (81.90%), Query Frame = 0
BLAST of Sed0026736 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.5e-64 Identity = 132/207 (63.77%), Postives = 162/207 (78.26%), Query Frame = 0
BLAST of Sed0026736 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 4.5e-56 Identity = 106/171 (61.99%), Postives = 143/171 (83.63%), Query Frame = 0
BLAST of Sed0026736 vs. ExPASy Swiss-Prot
Match: Q9FKF6 (Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 4.2e-54 Identity = 109/201 (54.23%), Postives = 146/201 (72.64%), Query Frame = 0
BLAST of Sed0026736 vs. ExPASy Swiss-Prot
Match: Q7XC35 (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 8.7e-52 Identity = 108/201 (53.73%), Postives = 138/201 (68.66%), Query Frame = 0
BLAST of Sed0026736 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 5.1e-36 Identity = 73/163 (44.79%), Postives = 109/163 (66.87%), Query Frame = 0
BLAST of Sed0026736 vs. ExPASy TrEMBL
Match: A0A6J1L0U3 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499346 PE=3 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 5.6e-86 Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0
BLAST of Sed0026736 vs. ExPASy TrEMBL
Match: A0A6J1H4V3 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111460076 PE=3 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 1.3e-85 Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0
BLAST of Sed0026736 vs. ExPASy TrEMBL
Match: A0A6J1DQ51 (Cyclin OS=Momordica charantia OX=3673 GN=LOC111022783 PE=3 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 9.0e-76 Identity = 156/206 (75.73%), Postives = 169/206 (82.04%), Query Frame = 0
BLAST of Sed0026736 vs. ExPASy TrEMBL
Match: A0A0A0KER4 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G078670 PE=3 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.2e-75 Identity = 148/186 (79.57%), Postives = 159/186 (85.48%), Query Frame = 0
BLAST of Sed0026736 vs. ExPASy TrEMBL
Match: A0A1S4E2M4 (cyclin-U4-1-like OS=Cucumis melo OX=3656 GN=LOC103498997 PE=3 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 3.8e-74 Identity = 145/177 (81.92%), Postives = 155/177 (87.57%), Query Frame = 0
BLAST of Sed0026736 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 ) HSP 1 Score: 247.3 bits (630), Expect = 1.1e-65 Identity = 132/207 (63.77%), Postives = 162/207 (78.26%), Query Frame = 0
BLAST of Sed0026736 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 ) HSP 1 Score: 219.2 bits (557), Expect = 3.2e-57 Identity = 106/171 (61.99%), Postives = 143/171 (83.63%), Query Frame = 0
BLAST of Sed0026736 vs. TAIR 10
Match: AT5G61650.1 (CYCLIN P4;2 ) HSP 1 Score: 212.6 bits (540), Expect = 3.0e-55 Identity = 109/201 (54.23%), Postives = 146/201 (72.64%), Query Frame = 0
BLAST of Sed0026736 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 ) HSP 1 Score: 152.5 bits (384), Expect = 3.6e-37 Identity = 73/163 (44.79%), Postives = 109/163 (66.87%), Query Frame = 0
BLAST of Sed0026736 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 ) HSP 1 Score: 145.6 bits (366), Expect = 4.5e-35 Identity = 75/159 (47.17%), Postives = 107/159 (67.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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