Sed0026697 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAGGGCACCATTTTATGATGAAAATGGTGTTAAAAGAGGTGCATGGAGTGCTGATGAAGATGAAAAGCTCAAAGCTTACGTCCACAAAAATGGTCACTGCAACTGGCGAGAGCTCCCTAGATTTGCAGGTAATTACTTCATTGATTAATTAATTAATTAATTATGTGTTATACCCATTTTGAAAGATGGAATCTTTTACTTGATTTTGCTTTCAATTTTGAGAATTTGGATATCTTCTTTGGAGTTCATTCTTTCTACATCTTCTTCTTTCTTTGAAGTTATTTTGTAAAAATAAAACAACCCATTTGAAAAAAATGGCCCTTTAACTTAAATTTTGCTTTCAATTGCTTTAATATGGTACTTATAGATATAGAAGATTTGGATATTACCTTTGAGTTCATTAATTTGGTCTTCTTCTTTCTTTGAAGTTATTTTGTAAAATAAAACAACCCATTTGAAAAGATGGTCCTTACACTCAATTTTTTGCTTTCAATTGCTTTAATAGTTCTTATAGATATAGATGAATTGGATATTACCTTTGAGTTCATTAATTTGATCTTCCTTTTTTTTTTGAAGTTATTTTGTAAAATAAAACAACTCATTTGAAAAGATGACCCTTACACTCAATTTTTTGCTCTTAATTGCTTTAATTAATCTCATTAGAGAGATAAGTTGGCATTTCTAATTCCTCTTAATTATTTTTTGAAGAAAAAAAAACCCATTTGAAAAATGGCATCTTTTAGCTAAATTTTGTTTTAGGCTGCTTCATAGACCTTAGAGAAGAGAGATTGAGAGATGAATATTTTTCATTTTTTATAGTTTTCACATAAAGTTAATTATTATATGAATTGTGATGATCTTATTGATCTTGATTTGCATATAACTTTACAATTAACTATATATTTAATTGGGATGCTGAGATTTGGTTATGATTTAATTTCATTATTAGGTTTGTCGAGGTGTGGCAAAAGTTGTAGACTGCGTTGGATTAATTACCTTAGTCCAGATGTGAAAAGAGGAAACTACTCCAAAGAAGAAGAAGATTTAATTCTCCAATTACACCAACAACATGGAAACAAGTATGTTTCTTTATAAAAATTGATCAAATCCCAAACCCCATAATCATATTCCATGCTGAAATTTGAATATTATTTCTTATGTTATCCAAGCTAAATAGTTCAATTCATATCTATGAAGAACATTATCAAAGATTCATGTCTTGTGTTTTGCAAAATAATTGCATATAGTTCATTCAACTGATTGAGTACTTTTATACGTGTAAATAACATACAATAGGTTTGTATTAGAATTGGATTTTTAGGTTAATTTAGTTTGTGTTGAGATATGGATTGGATTGTTTGTTGTGCATATGAACTTTATATAATTTCAGTTATCTGTAATAGTGTTTTATTAGAATGCACTACATAAATTTTCTTAAAACCCTATTCCCAATTGATTGACATTTTGCATCGTAATTTTCTTAAGAAAATCACTATCTTCTCTGTCCATGAATGTAACTAATACACTGTTAGAGAATCATGTAAATTGTGTGTTTTCTTTTATGTTTCTTTAGTATTTTCGATCGATTGTTGTTGCCATTTCATTACAATTTGCATATAGTTTTTTTCATTAGACAACCCTACAACATATGCAACCTCACGATTACTAGAACGCACATGATGCCATTGATAACGGCCAATCTATAATAGTTCAGTTAGCATTAGTTATACTTTATCACCATTTAAATAGTGAATAGATTCAGCTGTTGAGGATTTAACTTCTTGACAAGTTTATTTGGTTATCTAAAATGATTATAACTATCTATTGTAGATGGTCACTCATAGCTACAAAATTACCCGGACAAACGGATAATGAAATAAAGAATTATTGGCACACTCATTTAAAGAATCAGAAATCAACCAAGGTGGCAAAGAAGCAACAAAGTTTGGCAAATTCCAAGCAAAAGTCCATCCAAAAGAGAGAAACAGAAATGAAAACCAATTTGACAAACAAAATTCCCTCTCATCAGATCTTTGAAAGCTCTCATTTTTCCCCTTTGTCTAATTCCTCTGAAATCTCCAATCAAGAATCAACAGAAGATCACAGCCCTCCAACATCATTGAAGTTTCAAGAACCAATTTATAACAGTGGAGATTTTTGGGCTGATCCATTTCTAGTAGATAATTTGGAAGTTGAAAGTGAAAGCTCAATGCACTTTGATGTTCTTGGAGGCTCCAATCCACCTTATGATTTGCAGTTTGATGAAGATTTTATCTACCAAGTTATGAAAGAATTGCCTCAAAATTATTATCAATCACAATTATATCCCTATTGA ATGGTTAGGGCACCATTTTATGATGAAAATGGTGTTAAAAGAGGTGCATGGAGTGCTGATGAAGATGAAAAGCTCAAAGCTTACGTCCACAAAAATGGTCACTGCAACTGGCGAGAGCTCCCTAGATTTGCAGGTTTGTCGAGGTGTGGCAAAAGTTGTAGACTGCGTTGGATTAATTACCTTAGTCCAGATGTGAAAAGAGGAAACTACTCCAAAGAAGAAGAAGATTTAATTCTCCAATTACACCAACAACATGGAAACAAATGGTCACTCATAGCTACAAAATTACCCGGACAAACGGATAATGAAATAAAGAATTATTGGCACACTCATTTAAAGAATCAGAAATCAACCAAGGTGGCAAAGAAGCAACAAAGTTTGGCAAATTCCAAGCAAAAGTCCATCCAAAAGAGAGAAACAGAAATGAAAACCAATTTGACAAACAAAATTCCCTCTCATCAGATCTTTGAAAGCTCTCATTTTTCCCCTTTGTCTAATTCCTCTGAAATCTCCAATCAAGAATCAACAGAAGATCACAGCCCTCCAACATCATTGAAGTTTCAAGAACCAATTTATAACAGTGGAGATTTTTGGGCTGATCCATTTCTAGTAGATAATTTGGAAGTTGAAAGTGAAAGCTCAATGCACTTTGATGTTCTTGGAGGCTCCAATCCACCTTATGATTTGCAGTTTGATGAAGATTTTATCTACCAAGTTATGAAAGAATTGCCTCAAAATTATTATCAATCACAATTATATCCCTATTGA ATGGTTAGGGCACCATTTTATGATGAAAATGGTGTTAAAAGAGGTGCATGGAGTGCTGATGAAGATGAAAAGCTCAAAGCTTACGTCCACAAAAATGGTCACTGCAACTGGCGAGAGCTCCCTAGATTTGCAGGTTTGTCGAGGTGTGGCAAAAGTTGTAGACTGCGTTGGATTAATTACCTTAGTCCAGATGTGAAAAGAGGAAACTACTCCAAAGAAGAAGAAGATTTAATTCTCCAATTACACCAACAACATGGAAACAAATGGTCACTCATAGCTACAAAATTACCCGGACAAACGGATAATGAAATAAAGAATTATTGGCACACTCATTTAAAGAATCAGAAATCAACCAAGGTGGCAAAGAAGCAACAAAGTTTGGCAAATTCCAAGCAAAAGTCCATCCAAAAGAGAGAAACAGAAATGAAAACCAATTTGACAAACAAAATTCCCTCTCATCAGATCTTTGAAAGCTCTCATTTTTCCCCTTTGTCTAATTCCTCTGAAATCTCCAATCAAGAATCAACAGAAGATCACAGCCCTCCAACATCATTGAAGTTTCAAGAACCAATTTATAACAGTGGAGATTTTTGGGCTGATCCATTTCTAGTAGATAATTTGGAAGTTGAAAGTGAAAGCTCAATGCACTTTGATGTTCTTGGAGGCTCCAATCCACCTTATGATTTGCAGTTTGATGAAGATTTTATCTACCAAGTTATGAAAGAATTGCCTCAAAATTATTATCAATCACAATTATATCCCTATTGA MVRAPFYDENGVKRGAWSADEDEKLKAYVHKNGHCNWRELPRFAGLSRCGKSCRLRWINYLSPDVKRGNYSKEEEDLILQLHQQHGNKWSLIATKLPGQTDNEIKNYWHTHLKNQKSTKVAKKQQSLANSKQKSIQKRETEMKTNLTNKIPSHQIFESSHFSPLSNSSEISNQESTEDHSPPTSLKFQEPIYNSGDFWADPFLVDNLEVESESSMHFDVLGGSNPPYDLQFDEDFIYQVMKELPQNYYQSQLYPY Homology
BLAST of Sed0026697 vs. NCBI nr
Match: XP_038888503.1 (transcription factor MYB4-like [Benincasa hispida]) HSP 1 Score: 397.9 bits (1021), Expect = 6.6e-107 Identity = 201/260 (77.31%), Postives = 226/260 (86.92%), Query Frame = 0
BLAST of Sed0026697 vs. NCBI nr
Match: XP_022952680.1 (transcription factor MYB58-like [Cucurbita moschata]) HSP 1 Score: 350.1 bits (897), Expect = 1.6e-92 Identity = 182/258 (70.54%), Postives = 211/258 (81.78%), Query Frame = 0
BLAST of Sed0026697 vs. NCBI nr
Match: KAG6572331.1 (Transcription factor MYB92, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 349.4 bits (895), Expect = 2.7e-92 Identity = 182/258 (70.54%), Postives = 211/258 (81.78%), Query Frame = 0
BLAST of Sed0026697 vs. NCBI nr
Match: XP_023554593.1 (transcription factor MYB4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 348.6 bits (893), Expect = 4.6e-92 Identity = 182/258 (70.54%), Postives = 211/258 (81.78%), Query Frame = 0
BLAST of Sed0026697 vs. NCBI nr
Match: XP_022969236.1 (transcription factor MYB4-like [Cucurbita maxima]) HSP 1 Score: 341.7 bits (875), Expect = 5.6e-90 Identity = 181/259 (69.88%), Postives = 210/259 (81.08%), Query Frame = 0
BLAST of Sed0026697 vs. ExPASy Swiss-Prot
Match: Q9SA47 (Transcription factor MYB58 OS=Arabidopsis thaliana OX=3702 GN=MYB58 PE=2 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 4.1e-43 Identity = 90/169 (53.25%), Postives = 112/169 (66.27%), Query Frame = 0
BLAST of Sed0026697 vs. ExPASy Swiss-Prot
Match: Q6K1S6 (Transcription factor MYB30 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB30 PE=1 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 5.9e-42 Identity = 100/257 (38.91%), Postives = 148/257 (57.59%), Query Frame = 0
BLAST of Sed0026697 vs. ExPASy Swiss-Prot
Match: Q9SBF3 (Transcription factor MYB92 OS=Arabidopsis thaliana OX=3702 GN=MYB92 PE=1 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.7e-41 Identity = 73/115 (63.48%), Postives = 91/115 (79.13%), Query Frame = 0
BLAST of Sed0026697 vs. ExPASy Swiss-Prot
Match: Q7XBH4 (Transcription factor MYB4 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB4 PE=2 SV=2) HSP 1 Score: 170.6 bits (431), Expect = 2.2e-41 Identity = 73/115 (63.48%), Postives = 93/115 (80.87%), Query Frame = 0
BLAST of Sed0026697 vs. ExPASy Swiss-Prot
Match: Q9FJP2 (Transcription factor MYB53 OS=Arabidopsis thaliana OX=3702 GN=MYB53 PE=1 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 5.0e-41 Identity = 72/115 (62.61%), Postives = 91/115 (79.13%), Query Frame = 0
BLAST of Sed0026697 vs. ExPASy TrEMBL
Match: A0A6J1GMG4 (transcription factor MYB58-like OS=Cucurbita moschata OX=3662 GN=LOC111455304 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 7.6e-93 Identity = 182/258 (70.54%), Postives = 211/258 (81.78%), Query Frame = 0
BLAST of Sed0026697 vs. ExPASy TrEMBL
Match: A0A6J1HX88 (transcription factor MYB4-like OS=Cucurbita maxima OX=3661 GN=LOC111468296 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 2.7e-90 Identity = 181/259 (69.88%), Postives = 210/259 (81.08%), Query Frame = 0
BLAST of Sed0026697 vs. ExPASy TrEMBL
Match: A0A1S3C0B0 (transcription factor WER-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495551 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 1.5e-85 Identity = 183/273 (67.03%), Postives = 216/273 (79.12%), Query Frame = 0
BLAST of Sed0026697 vs. ExPASy TrEMBL
Match: A0A6J1C3G7 (transcription factor WER-like OS=Momordica charantia OX=3673 GN=LOC111007597 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 3.4e-85 Identity = 184/267 (68.91%), Postives = 206/267 (77.15%), Query Frame = 0
BLAST of Sed0026697 vs. ExPASy TrEMBL
Match: A0A1S4E0E6 (myb-related protein Myb4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495551 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 8.0e-58 Identity = 104/126 (82.54%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of Sed0026697 vs. TAIR 10
Match: AT1G16490.1 (myb domain protein 58 ) HSP 1 Score: 176.4 bits (446), Expect = 2.9e-44 Identity = 90/169 (53.25%), Postives = 112/169 (66.27%), Query Frame = 0
BLAST of Sed0026697 vs. TAIR 10
Match: AT5G10280.1 (myb domain protein 92 ) HSP 1 Score: 171.0 bits (432), Expect = 1.2e-42 Identity = 73/115 (63.48%), Postives = 91/115 (79.13%), Query Frame = 0
BLAST of Sed0026697 vs. TAIR 10
Match: AT5G65230.1 (myb domain protein 53 ) HSP 1 Score: 169.5 bits (428), Expect = 3.6e-42 Identity = 72/115 (62.61%), Postives = 91/115 (79.13%), Query Frame = 0
BLAST of Sed0026697 vs. TAIR 10
Match: AT3G12820.1 (myb domain protein 10 ) HSP 1 Score: 168.7 bits (426), Expect = 6.1e-42 Identity = 80/141 (56.74%), Postives = 100/141 (70.92%), Query Frame = 0
BLAST of Sed0026697 vs. TAIR 10
Match: AT1G34670.1 (myb domain protein 93 ) HSP 1 Score: 168.3 bits (425), Expect = 7.9e-42 Identity = 73/115 (63.48%), Postives = 90/115 (78.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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