Sed0026635 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTCTTCTTCTTTCAAATACAAACCCTTTTGTTTAAGCAACGCAGTCACCATTTTCGTTGTTGCTCTGCTTCTCCTTTCCGGGTTTTGCTCGGCAACTCGGCCGGGTAAGACGATGGGACCGGGGATGGATTCCGACGCGTCGAATTCTAACCAGCAAGACAATTTCAATTACAGGACGGGGTTCCGATATGTCGGCCAAACGTTCAGCTTTCTCCCCAGAGGCGTTCCCATCCCTCCTTCTGGCCCTTCCGACAGGCACAACTCTGTAGCTGACTCTGTTCCTCACACTTGA ATGGCTTCTTCTTCTTCTTTCAAATACAAACCCTTTTGTTTAAGCAACGCAGTCACCATTTTCGTTGTTGCTCTGCTTCTCCTTTCCGGGTTTTGCTCGGCAACTCGGCCGGGTAAGACGATGGGACCGGGGATGGATTCCGACGCGTCGAATTCTAACCAGCAAGACAATTTCAATTACAGGACGGGGTTCCGATATGTCGGCCAAACGTTCAGCTTTCTCCCCAGAGGCGTTCCCATCCCTCCTTCTGGCCCTTCCGACAGGCACAACTCTGTAGCTGACTCTGTTCCTCACACTTGA ATGGCTTCTTCTTCTTCTTTCAAATACAAACCCTTTTGTTTAAGCAACGCAGTCACCATTTTCGTTGTTGCTCTGCTTCTCCTTTCCGGGTTTTGCTCGGCAACTCGGCCGGGTAAGACGATGGGACCGGGGATGGATTCCGACGCGTCGAATTCTAACCAGCAAGACAATTTCAATTACAGGACGGGGTTCCGATATGTCGGCCAAACGTTCAGCTTTCTCCCCAGAGGCGTTCCCATCCCTCCTTCTGGCCCTTCCGACAGGCACAACTCTGTAGCTGACTCTGTTCCTCACACTTGA MASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVPHT Homology
BLAST of Sed0026635 vs. NCBI nr
Match: KAG6601330.1 (Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 122.9 bits (307), Expect = 1.6e-24 Identity = 64/97 (65.98%), Postives = 72/97 (74.23%), Query Frame = 0
BLAST of Sed0026635 vs. NCBI nr
Match: KAG7032113.1 (Protein IDA, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 117.5 bits (293), Expect = 6.7e-23 Identity = 58/83 (69.88%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of Sed0026635 vs. NCBI nr
Match: KAG6574002.1 (Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.8 bits (281), Expect = 1.6e-21 Identity = 63/97 (64.95%), Postives = 68/97 (70.10%), Query Frame = 0
BLAST of Sed0026635 vs. NCBI nr
Match: KAA0034518.1 (putative Membrane lipoprotein [Cucumis melo var. makuwa]) HSP 1 Score: 105.9 bits (263), Expect = 2.0e-19 Identity = 59/96 (61.46%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of Sed0026635 vs. NCBI nr
Match: TYK09072.1 (putative Membrane lipoprotein [Cucumis melo var. makuwa]) HSP 1 Score: 105.9 bits (263), Expect = 2.0e-19 Identity = 59/96 (61.46%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of Sed0026635 vs. ExPASy Swiss-Prot
Match: Q8LAD7 (Protein IDA OS=Arabidopsis thaliana OX=3702 GN=IDA PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.0e-05 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0
BLAST of Sed0026635 vs. ExPASy TrEMBL
Match: A0A5D3CCP4 (Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00620 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 9.7e-20 Identity = 59/96 (61.46%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of Sed0026635 vs. ExPASy TrEMBL
Match: A0A5A7SV51 (Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005330 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 9.7e-20 Identity = 59/96 (61.46%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of Sed0026635 vs. ExPASy TrEMBL
Match: A0A0A0KR07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608230 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.6e-17 Identity = 59/98 (60.20%), Postives = 66/98 (67.35%), Query Frame = 0
BLAST of Sed0026635 vs. ExPASy TrEMBL
Match: A0A5N5H8T3 (Protein IDA OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_016015 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.7e-14 Identity = 55/103 (53.40%), Postives = 65/103 (63.11%), Query Frame = 0
BLAST of Sed0026635 vs. ExPASy TrEMBL
Match: A0A6J5TMQ2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS6935 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 6.1e-14 Identity = 50/100 (50.00%), Postives = 64/100 (64.00%), Query Frame = 0
BLAST of Sed0026635 vs. TAIR 10
Match: AT1G68765.1 (Putative membrane lipoprotein ) HSP 1 Score: 48.5 bits (114), Expect = 3.5e-06 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0
BLAST of Sed0026635 vs. TAIR 10
Match: AT3G25655.1 (inflorescence deficient in abscission (IDA)-like 1 ) HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04 Identity = 25/81 (30.86%), Postives = 42/81 (51.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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