Sed0026568 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGTTCAGTTATCACAGAGAAAGCAAAATCATGGAAGCAATTCCACCAAATTGGCGCCACCTGCCCCTGTTCATCACTTTGTTCATTCCCTCAAACAATTTCCCTTCTGATTCTCACACTCAACAACAAAAAACCCACTTTCAAATTCCCACAAATTCATTCCAAAATCCCCATTTCATCCCTTCAAATTGGGGGTTTTCATTTCTGTATGATAGAATCAAGGCAAGCCCAGAACGGTATAATCTCAGATGATGGAAAAATGGCGATGGGGAAAAAGGGTTTTCGAAAGGTTAAGCAGATGATGTTCTATCCATTTCGAATGGCCAAGAAACAGATTCTGAGGCCGAAGATTAAAAGGGTTTTTTCTTCTTCGATTAAAAGGGGTTTTGATGGGAGTGTAAGATATCAAGGTTGTGGTTTCTGTTTGCCCGAACTTTGTATTTCAGATTCTAAAAATGGGTCTCCTCCAACTGACCCAAATCACCGCAACTTCACTGAAGAAATGTTGAGAGTTCTCATTCAGAACAATGATTTCTATTCCAAACAATCCAATCCTCATTTGGGTATGTTTTTCTTTCTTTCTTCTTCTTAATTCAAGTTAATACATGAGTTTTCTAGAAATTTCCTTGACATCCAAATGTTGTAGGTTTATACAATATGTACTATGGTAATACTCGAGGTATGCATAAGGATAACAATGATATGTGTTTGCAACTATCATCGAGTGGTCCCCAAGGGGCGGCATAGTGGTTGAAGACTTGGGCTTTGAGAGTATGCTCCCCTCAAGGTCTTAGGTTCGAGACTCACTTGTGACATTACTCCTTCGATGTCTCCAGTGCCTGGCCTAAGGACCGGCGTGGTAACCCTTGTTTTAAAAAAAAAAAATACTATCATCGAGTGACCTAATAGTCAAGAAGACTTTAAGTAATGGGTTCAATCTATGATGAACACCTACCTAAAAATTAATTTCCTATGAACTTCTTTGACATCCGAATGTTATAGAGTCAGACGTTATATCCCATGACATTATTCGAGGTGCGCACAAGCTAATCTGGACAATCATGGATATCAAACAAGTTAATAGATGATATTTGTTTGTAACTATCATCGAGTGGCCTAATAGTCAAGAAAGGCTAAGGTGATGATATTCATGATGACCACCTACTTAGTAATTAATTTTCTACGAGTTTCTTTGACATCCAAATTTTGCTGGATAAGATGGTAGTCGAGGCATGCGTAAGCTAATTTGGACACTTATCATCATCAATATATAAAAAAAAAAAGATATGTGTTATGTAGTTTAATTATATTGCTGTGGTTCTTATTGGCAGGTGTTTAAGTGAACGCTAGGAAG TTTGTTCAGTTATCACAGAGAAAGCAAAATCATGGAAGCAATTCCACCAAATTGGCGCCACCTGCCCCTGTTCATCACTTTGTTCATTCCCTCAAACAATTTCCCTTCTGATTCTCACACTCAACAACAAAAAACCCACTTTCAAATTCCCACAAATTCATTCCAAAATCCCCATTTCATCCCTTCAAATTGGGGGTTTTCATTTCTGTATGATAGAATCAAGGCAAGCCCAGAACGGTATAATCTCAGATGATGGAAAAATGGCGATGGGGAAAAAGGGTTTTCGAAAGGTTAAGCAGATGATGTTCTATCCATTTCGAATGGCCAAGAAACAGATTCTGAGGCCGAAGATTAAAAGGGTTTTTTCTTCTTCGATTAAAAGGGGTTTTGATGGGAGTGTAAGATATCAAGGTTGTGGTTTCTGTTTGCCCGAACTTTGTATTTCAGATTCTAAAAATGGGTCTCCTCCAACTGACCCAAATCACCGCAACTTCACTGAAGAAATGTTGAGAGTTCTCATTCAGAACAATGATTTCTATTCCAAACAATCCAATCCTCATTTGGGTGTTTAAGTGAACGCTAGGAAG ATGATAGAATCAAGGCAAGCCCAGAACGGTATAATCTCAGATGATGGAAAAATGGCGATGGGGAAAAAGGGTTTTCGAAAGGTTAAGCAGATGATGTTCTATCCATTTCGAATGGCCAAGAAACAGATTCTGAGGCCGAAGATTAAAAGGGTTTTTTCTTCTTCGATTAAAAGGGGTTTTGATGGGAGTGTAAGATATCAAGGTTGTGGTTTCTGTTTGCCCGAACTTTGTATTTCAGATTCTAAAAATGGGTCTCCTCCAACTGACCCAAATCACCGCAACTTCACTGAAGAAATGTTGAGAGTTCTCATTCAGAACAATGATTTCTATTCCAAACAATCCAATCCTCATTTGGGTGTTTAA MIESRQAQNGIISDDGKMAMGKKGFRKVKQMMFYPFRMAKKQILRPKIKRVFSSSIKRGFDGSVRYQGCGFCLPELCISDSKNGSPPTDPNHRNFTEEMLRVLIQNNDFYSKQSNPHLGV Homology
BLAST of Sed0026568 vs. NCBI nr
Match: XP_011648888.1 (uncharacterized protein LOC101216013 [Cucumis sativus] >XP_031736788.1 uncharacterized protein LOC101216013 [Cucumis sativus] >KGN61038.1 hypothetical protein Csa_021211 [Cucumis sativus]) HSP 1 Score: 149.4 bits (376), Expect = 1.9e-32 Identity = 83/130 (63.85%), Postives = 92/130 (70.77%), Query Frame = 0
BLAST of Sed0026568 vs. NCBI nr
Match: XP_008452984.1 (PREDICTED: uncharacterized protein LOC103493824 [Cucumis melo]) HSP 1 Score: 148.7 bits (374), Expect = 3.3e-32 Identity = 83/136 (61.03%), Postives = 91/136 (66.91%), Query Frame = 0
BLAST of Sed0026568 vs. NCBI nr
Match: XP_038890967.1 (uncharacterized protein LOC120080390 [Benincasa hispida] >XP_038890968.1 uncharacterized protein LOC120080390 [Benincasa hispida] >XP_038890969.1 uncharacterized protein LOC120080390 [Benincasa hispida]) HSP 1 Score: 147.9 bits (372), Expect = 5.6e-32 Identity = 81/129 (62.79%), Postives = 91/129 (70.54%), Query Frame = 0
BLAST of Sed0026568 vs. NCBI nr
Match: KAG7020835.1 (hypothetical protein SDJN02_17523, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 140.6 bits (353), Expect = 8.9e-30 Identity = 77/119 (64.71%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of Sed0026568 vs. NCBI nr
Match: XP_022969627.1 (uncharacterized protein LOC111468598 [Cucurbita maxima]) HSP 1 Score: 134.4 bits (337), Expect = 6.4e-28 Identity = 76/121 (62.81%), Postives = 84/121 (69.42%), Query Frame = 0
BLAST of Sed0026568 vs. ExPASy TrEMBL
Match: A0A0A0LH19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035380 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 9.3e-33 Identity = 83/130 (63.85%), Postives = 92/130 (70.77%), Query Frame = 0
BLAST of Sed0026568 vs. ExPASy TrEMBL
Match: A0A1S3BWA1 (uncharacterized protein LOC103493824 OS=Cucumis melo OX=3656 GN=LOC103493824 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.6e-32 Identity = 83/136 (61.03%), Postives = 91/136 (66.91%), Query Frame = 0
BLAST of Sed0026568 vs. ExPASy TrEMBL
Match: A0A6J1FAJ4 (uncharacterized protein LOC111443901 OS=Cucurbita moschata OX=3662 GN=LOC111443901 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 3.1e-28 Identity = 75/117 (64.10%), Postives = 84/117 (71.79%), Query Frame = 0
BLAST of Sed0026568 vs. ExPASy TrEMBL
Match: A0A6J1HWU1 (uncharacterized protein LOC111468598 OS=Cucurbita maxima OX=3661 GN=LOC111468598 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 3.1e-28 Identity = 76/121 (62.81%), Postives = 84/121 (69.42%), Query Frame = 0
BLAST of Sed0026568 vs. ExPASy TrEMBL
Match: A0A6J1DRZ8 (uncharacterized protein LOC111023307 OS=Momordica charantia OX=3673 GN=LOC111023307 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.3e-28 Identity = 73/115 (63.48%), Postives = 82/115 (71.30%), Query Frame = 0
BLAST of Sed0026568 vs. TAIR 10
Match: AT5G26720.1 (unknown protein; Has 15 Blast hits to 15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 5.6e-06 Identity = 20/38 (52.63%), Postives = 26/38 (68.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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