Sed0026529 (gene) Chayote v1

Overview


Name	Sed0026529
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein cornichon homolog 4-like
Location	LG04: 6097512 .. 6098753 (-)
RNA-Seq Expression	Sed0026529
Synteny	Sed0026529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGATCTATATGTGTGGCTTCTATCATTCTTCTTCCTCATAGCTCTTCTCATACTCCTTGCTTATCAGGTAACCTTCCAAGCCCTTTCTCCAAACACTCGTTTTGAATGTACATTAATGTCGTTGAAATATTGCTCTAATTTCAATGAATTTTTCTAATCTTTCATTGATTTGATCTATTTTCCAAGAGTTTGCCATTGATTAATATGCTCGTAATAATTGATGCACACATATTCATAAGCTGTAAACAACATTTTTCCAAGTGTTTATCTTGAATCTAACTTATCTTCTACTTTGTTTAGCTCTTGTACTTATTAGATCTTGGGGTTGATTACATCAACCCTTATGATGCTTCTTCTCGAATCAATAAAGTTATTATGCCGGAGTTCATTTTGATTGGAGTTTTGTGCCTCTTCTATCTTCTGACGGGGTATTGGATTATGTCTTTGCTTTGTGGGCCCTACATTTATTATAATCTTACACGATAAGGGCTTTCATTTTTTTTTTTTTAAATTCGTCACTGTTCGAGCCAATTTGCGTACACTTTCTTCTCCCTTACATTAGTGATTTTTTTTCTTCATGTGATCAGGTATCTACGAAGGCAGCACCTGATAGATGTTACTGAGATATTCAATATGTTAACTTGGGAAAAGAAGCAAAGGCTTTACAAACTAGCATATCTACTTTTCCTCTTCCTCTCTACATTGTGGTATATCGAAAATAACTTTTCATGTCGTTGTGTTGTTACCTAATGCCATCTTCTTCATTGCATCTACTAATTTCTAGTAAAACAAAATATTGACTAGTTTTGTCTCATGTTCGAAAGCTACACAAGCTACTATTCTCATTATTAATTAGTTTCGAAGTGAAATGCTACCGTATTTAATGAAATGGTTGAAATTACTCAACTAAGTCCATGTTACCTTTTAAACCTTTGATATGCCAACTTTACTTAATGGACTGAATCACAATGGCTCACTAATCTAAAATCAAGTACTTTTGAAGTAGTTGATAGAGGAATAATTCCAACTACAAGAAACCAGATTATTGATTATTACTAATCTAAAATTAAAACTAAATTCCGAAAATAATTAGGAAAGAAAAGAAAACGTACTAGTAACGTCAATCATGGATACTTTGCGAAAACACCATTTATGACTTATTTTTTTAAGTAGTCTTTAACATGATAATAGAGTAGTGTTAGCGAAGGCACTCGACGATGACATCCATCGAAAGTAG

mRNA sequence

ATGGCAGATCTATATGTGTGGCTTCTATCATTCTTCTTCCTCATAGCTCTTCTCATACTCCTTGCTTATCAGCTCTTGTACTTATTAGATCTTGGGGTTGATTACATCAACCCTTATGATGCTTCTTCTCGAATCAATAAAGTTATTATGCCGGAGTTCATTTTGATTGGAGTTTTGTGCCTCTTCTATCTTCTGACGGGGTATTGGATTATGTATCTACGAAGGCAGCACCTGATAGATGTTACTGAGATATTCAATATGTTAACTTGGGAAAAGAAGCAAAGGCTTTACAAACTAGCATATCTACTTTTCCTCTTCCTCTCTACATTGTGGTATATCGAAAATAACTTTTCATTAGTGTTAGCGAAGGCACTCGACGATGACATCCATCGAAAGTAG

Coding sequence (CDS)

ATGGCAGATCTATATGTGTGGCTTCTATCATTCTTCTTCCTCATAGCTCTTCTCATACTCCTTGCTTATCAGCTCTTGTACTTATTAGATCTTGGGGTTGATTACATCAACCCTTATGATGCTTCTTCTCGAATCAATAAAGTTATTATGCCGGAGTTCATTTTGATTGGAGTTTTGTGCCTCTTCTATCTTCTGACGGGGTATTGGATTATGTATCTACGAAGGCAGCACCTGATAGATGTTACTGAGATATTCAATATGTTAACTTGGGAAAAGAAGCAAAGGCTTTACAAACTAGCATATCTACTTTTCCTCTTCCTCTCTACATTGTGGTATATCGAAAATAACTTTTCATTAGTGTTAGCGAAGGCACTCGACGATGACATCCATCGAAAGTAG

Protein sequence

MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLCLFYLLTGYWIMYLRRQHLIDVTEIFNMLTWEKKQRLYKLAYLLFLFLSTLWYIENNFSLVLAKALDDDIHRK

Homology

[Close]

BLAST of Sed0026529 vs. NCBI nr
Match: XP_038876883.1 (protein cornichon homolog 4-like [Benincasa hispida])

HSP 1 Score: 162.2 bits (409), Expect = 3.2e-36
Identity = 94/143 (65.73%), Postives = 107/143 (74.83%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M DLYVWL+SFFFLIALLI+L YQL+ L DL  DYINPYD++SRINKVI+PEF+ +GVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVILPEFVSVGVLC 60

Query: 61  LFYLLTGYWIM--------------YLRRQHLIDVTEIFNMLTWEKKQRLYKLAYLLF-L 120
           LFYLLTG+W M              YLRRQHLIDVTEIFNML WEKKQRL+KLAYL+F L
Sbjct: 61  LFYLLTGHWGMSMICGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

Query: 121 FLSTLWYIENNFSLVLAKALDDD 129
           FLS  W I +        AL+DD
Sbjct: 121 FLSIFWMIYS--------ALEDD 135

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BLAST of Sed0026529 vs. NCBI nr
Match: XP_004147951.1 (protein cornichon homolog 4 [Cucumis sativus] >XP_011650427.1 protein cornichon homolog 4 [Cucumis sativus] >KGN55923.1 hypothetical protein Csa_010358 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35
Identity = 94/143 (65.73%), Postives = 107/143 (74.83%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M DLYVWL+SFFFLIALLI+L YQL+ L DL  DYINP+D++SRINKVIMPEFI++GVLC
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLC 60

Query: 61  LFYLLTGYWIM--------------YLRRQHLIDVTEIFNMLTWEKKQRLYKLAYL-LFL 120
           LFYLLTG+W M              YLRRQHLIDVTEIFNML WEKKQRL+KLAYL + L
Sbjct: 61  LFYLLTGHWGMSLLSGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVVLL 120

Query: 121 FLSTLWYIENNFSLVLAKALDDD 129
           FLS  W I +        AL+DD
Sbjct: 121 FLSIFWMIYH--------ALEDD 135

[Close]

BLAST of Sed0026529 vs. NCBI nr
Match: XP_023005595.1 (protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35
Identity = 91/128 (71.09%), Postives = 100/128 (78.12%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M DLYVWL+SFFFLIALLI+L YQL+ L DL  DYINPYD++SRINKVI PEFI +GVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGYW--------------IMYLRRQHLIDVTEIFNMLTWEKKQRLYKLAYLLF-L 114
           LFYLLTG+W               MYLRRQHLIDVTEIFNML WEKKQRL+KLAYL+F L
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

[Close]

BLAST of Sed0026529 vs. NCBI nr
Match: XP_023539252.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35
Identity = 90/128 (70.31%), Postives = 100/128 (78.12%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M DLYVWL+SFFFLIALLI+L YQL+ L DL  DYINPYD++SRINKVI PEFI +GVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGYW--------------IMYLRRQHLIDVTEIFNMLTWEKKQRLYKLAYLLF-L 114
           LFYLLTG+W               MYLRRQHL+DVTEIFNML WEKKQRL+KLAYL+F L
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLVDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

[Close]

BLAST of Sed0026529 vs. NCBI nr
Match: XP_022943501.1 (protein cornichon homolog 4-like [Cucurbita moschata])

HSP 1 Score: 158.3 bits (399), Expect = 4.6e-35
Identity = 90/128 (70.31%), Postives = 100/128 (78.12%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M DLYVWL+SFFFLIALLI+L YQL+ L DL  DYINPYD++S+INKVI PEFI +GVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASQINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGYW--------------IMYLRRQHLIDVTEIFNMLTWEKKQRLYKLAYLLF-L 114
           LFYLLTG+W               MYLRRQHLIDVTEIFNML WEKKQRL+KLAYL+F L
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

[Close]

BLAST of Sed0026529 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.4e-32
Identity = 75/128 (58.59%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M D++ WL+SFFFLIAL+ ++ YQL+ L DL  DYINPYD++SRIN V++PEFI+ GVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  LFYLLTGYWIM--------------YLRRQHLIDVTEIFNMLTWEKKQRLYKLAYL-LFL 114
           +FYLLTG+W M              Y +RQHL+DVTEIFN+L WEKK+RL+KLAY+ L L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

[Close]

BLAST of Sed0026529 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.3e-28
Identity = 71/128 (55.47%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M +++ W++SF  LI LL L+ YQL+ L DL  DYINPYD++SRIN V++PE IL G LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  LFYLLTGYWIM--------------YLRRQHLIDVTEIFNMLTWEKKQRLYKLAY-LLFL 114
           +FYL+TG+W M              Y R+QHLIDVTEIFN+L WEKK+RL+KLAY +L L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

[Close]

BLAST of Sed0026529 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-25
Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 23  YQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLCLFYLLTGYWIM----------- 82
           + L+ L DL  DYINPYD++SRIN V++PEFI+ GVLC+FYLLTG+W M           
Sbjct: 15  FHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYN 74

Query: 83  ---YLRRQHLIDVTEIFNMLTWEKKQRLYKLAYL-LFLFLSTLWYI 114
              Y +RQHL+DVTEIFN+L WEKK+RL+KLAY+ L LFL+  W I
Sbjct: 75  FHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMI 120

[Close]

BLAST of Sed0026529 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 9.9e-25
Identity = 61/130 (46.92%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M DL  W++SF FL  L+I++ YQL  L DL  D INPYD SSRIN++++PEF L G+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  LFYLLTGYWIM--------------YLRRQHLIDVTEIFNMLTWEKKQRLYKLAYL-LFL 116
           L+Y+LTG+W M              Y++R+HL DVTE++N   WE+K+R+YK+ ++ L +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

[Close]

BLAST of Sed0026529 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-20
Identity = 57/141 (40.43%), Postives = 92/141 (65.25%), Query Frame = 0


Query: 3   DLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLCLF 62
           DL++W++SFF  +AL+  + YQ++ L DL  DY+NP++ S+RIN++++PEFIL G LCL 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGYWI--------------MYLRRQHLIDVTEIFNMLTWEKKQRLYKLAYLLFLFLS 122
           +LLT +W+              +Y  R++LIDVTE+F  +++EKK R  KL + +FLF+ 
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 TLWYIENNFSLVLAKALDDDI 130
            ++ +    S V +   DDD+
Sbjct: 124 VVFRL--TLSAVYSFTEDDDL 142

[Close]

BLAST of Sed0026529 vs. ExPASy TrEMBL
Match: A0A6J1KXU1 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 7.6e-36
Identity = 91/128 (71.09%), Postives = 100/128 (78.12%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M DLYVWL+SFFFLIALLI+L YQL+ L DL  DYINPYD++SRINKVI PEFI +GVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGYW--------------IMYLRRQHLIDVTEIFNMLTWEKKQRLYKLAYLLF-L 114
           LFYLLTG+W               MYLRRQHLIDVTEIFNML WEKKQRL+KLAYL+F L
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

[Close]

BLAST of Sed0026529 vs. ExPASy TrEMBL
Match: A0A0A0L2G6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036490 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 7.6e-36
Identity = 94/143 (65.73%), Postives = 107/143 (74.83%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M DLYVWL+SFFFLIALLI+L YQL+ L DL  DYINP+D++SRINKVIMPEFI++GVLC
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLC 60

Query: 61  LFYLLTGYWIM--------------YLRRQHLIDVTEIFNMLTWEKKQRLYKLAYL-LFL 120
           LFYLLTG+W M              YLRRQHLIDVTEIFNML WEKKQRL+KLAYL + L
Sbjct: 61  LFYLLTGHWGMSLLSGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVVLL 120

Query: 121 FLSTLWYIENNFSLVLAKALDDD 129
           FLS  W I +        AL+DD
Sbjct: 121 FLSIFWMIYH--------ALEDD 135

[Close]

BLAST of Sed0026529 vs. ExPASy TrEMBL
Match: A0A6J1FRW5 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.2e-35
Identity = 90/128 (70.31%), Postives = 100/128 (78.12%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M DLYVWL+SFFFLIALLI+L YQL+ L DL  DYINPYD++S+INKVI PEFI +GVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASQINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGYW--------------IMYLRRQHLIDVTEIFNMLTWEKKQRLYKLAYLLF-L 114
           LFYLLTG+W               MYLRRQHLIDVTEIFNML WEKKQRL+KLAYL+F L
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

[Close]

BLAST of Sed0026529 vs. ExPASy TrEMBL
Match: A0A1S3BLR3 (protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.8e-35
Identity = 92/143 (64.34%), Postives = 106/143 (74.13%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M DLYVWL+SFFFLIALLI+L YQL+ L DL  DYINPYD++SRINKVIMPEF+ +GVLC
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60

Query: 61  LFYLLTGYWIM--------------YLRRQHLIDVTEIFNMLTWEKKQRLYKLAYL-LFL 120
           LFYLLTG+W M              YLRRQ+L+DVTEIFNML WEKKQRL+KLAYL + L
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120

Query: 121 FLSTLWYIENNFSLVLAKALDDD 129
           FLS  W I +        AL+DD
Sbjct: 121 FLSIFWMIYH--------ALEDD 135

[Close]

BLAST of Sed0026529 vs. ExPASy TrEMBL
Match: A0A6J1HL36 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.9e-34
Identity = 90/143 (62.94%), Postives = 106/143 (74.13%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M DL+VWL+SFF L+ALLI+L YQL+ L DL  DYINPYD++SRINKV+MPEFI IGVLC
Sbjct: 1   MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLC 60

Query: 61  LFYLLTGYWIM--------------YLRRQHLIDVTEIFNMLTWEKKQRLYKLAYLLF-L 120
           LFYLLTG+W M              YLRRQ+L+DVTEIFNML WEKK+RL+KLAYL+F L
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLL 120

Query: 121 FLSTLWYIENNFSLVLAKALDDD 129
           FLS  W I +        AL+DD
Sbjct: 121 FLSIFWMIYS--------ALEDD 135

[Close]

BLAST of Sed0026529 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 138.3 bits (347), Expect = 4.5e-33
Identity = 75/128 (58.59%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M D++ WL+SFFFLIAL+ ++ YQL+ L DL  DYINPYD++SRIN V++PEFI+ GVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  LFYLLTGYWIM--------------YLRRQHLIDVTEIFNMLTWEKKQRLYKLAYL-LFL 114
           +FYLLTG+W M              Y +RQHL+DVTEIFN+L WEKK+RL+KLAY+ L L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

[Close]

BLAST of Sed0026529 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 125.9 bits (315), Expect = 2.3e-29
Identity = 71/128 (55.47%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M +++ W++SF  LI LL L+ YQL+ L DL  DYINPYD++SRIN V++PE IL G LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  LFYLLTGYWIM--------------YLRRQHLIDVTEIFNMLTWEKKQRLYKLAY-LLFL 114
           +FYL+TG+W M              Y R+QHLIDVTEIFN+L WEKK+RL+KLAY +L L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

[Close]

BLAST of Sed0026529 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26
Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 23  YQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLCLFYLLTGYWIM----------- 82
           + L+ L DL  DYINPYD++SRIN V++PEFI+ GVLC+FYLLTG+W M           
Sbjct: 15  FHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYN 74

Query: 83  ---YLRRQHLIDVTEIFNMLTWEKKQRLYKLAYL-LFLFLSTLWYI 114
              Y +RQHL+DVTEIFN+L WEKK+RL+KLAY+ L LFL+  W I
Sbjct: 75  FHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMI 120

[Close]

BLAST of Sed0026529 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 114.4 bits (285), Expect = 7.0e-26
Identity = 61/130 (46.92%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 1   MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLC 60
           M DL  W++SF FL  L+I++ YQL  L DL  D INPYD SSRIN++++PEF L G+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  LFYLLTGYWIM--------------YLRRQHLIDVTEIFNMLTWEKKQRLYKLAYL-LFL 116
           L+Y+LTG+W M              Y++R+HL DVTE++N   WE+K+R+YK+ ++ L +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

[Close]

BLAST of Sed0026529 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 99.4 bits (246), Expect = 2.3e-21
Identity = 57/141 (40.43%), Postives = 92/141 (65.25%), Query Frame = 0


Query: 3   DLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLCLF 62
           DL++W++SFF  +AL+  + YQ++ L DL  DY+NP++ S+RIN++++PEFIL G LCL 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGYWI--------------MYLRRQHLIDVTEIFNMLTWEKKQRLYKLAYLLFLFLS 122
           +LLT +W+              +Y  R++LIDVTE+F  +++EKK R  KL + +FLF+ 
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 TLWYIENNFSLVLAKALDDDI 130
            ++ +    S V +   DDD+
Sbjct: 124 VVFRL--TLSAVYSFTEDDDL 142

The following BLAST results are available for this feature:

BLAST of Sed0026529 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876883.1	3.2e-36	65.73	protein cornichon homolog 4-like [Benincasa hispida]	[more]
XP_004147951.1	1.6e-35	65.73	protein cornichon homolog 4 [Cucumis sativus] >XP_011650427.1 protein cornichon ...	[more]
XP_023005595.1	1.6e-35	71.09	protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornic...	[more]
XP_023539252.1	2.0e-35	70.31	protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943501.1	4.6e-35	70.31	protein cornichon homolog 4-like [Cucurbita moschata]	[more]

BLAST of Sed0026529 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84W04	6.4e-32	58.59	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	3.3e-28	55.47	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q3EDD7	2.6e-25	57.55	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q9SZ74	9.9e-25	46.92	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q9C7D7	3.3e-20	40.43	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of Sed0026529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXU1	7.6e-36	71.09	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=...	[more]
A0A0A0L2G6	7.6e-36	65.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036490 PE=3 SV=1	[more]
A0A6J1FRW5	2.2e-35	70.31	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 P...	[more]
A0A1S3BLR3	3.8e-35	64.34	protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 P...	[more]
A0A6J1HL36	1.9e-34	62.94	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=...	[more]

BLAST of Sed0026529 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12390.1	4.5e-33	58.59	Cornichon family protein	[more]
AT1G62880.1	2.3e-29	55.47	Cornichon family protein	[more]
AT1G12340.1	1.8e-26	57.55	Cornichon family protein	[more]
AT4G12090.1	7.0e-26	46.92	Cornichon family protein	[more]
AT3G12180.1	2.3e-21	40.43	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 4..111 e-value: 6.6E-33 score: 125.3
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 5..110 e-value: 8.5E-25 score: 87.4
None	No IPR available	PANTHER	PTHR12290:SF39	PROTEIN CORNICHON HOMOLOG 4-LIKE	coord: 1..113
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026529.1	Sed0026529.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016020	membrane