Sed0026529 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGATCTATATGTGTGGCTTCTATCATTCTTCTTCCTCATAGCTCTTCTCATACTCCTTGCTTATCAGGTAACCTTCCAAGCCCTTTCTCCAAACACTCGTTTTGAATGTACATTAATGTCGTTGAAATATTGCTCTAATTTCAATGAATTTTTCTAATCTTTCATTGATTTGATCTATTTTCCAAGAGTTTGCCATTGATTAATATGCTCGTAATAATTGATGCACACATATTCATAAGCTGTAAACAACATTTTTCCAAGTGTTTATCTTGAATCTAACTTATCTTCTACTTTGTTTAGCTCTTGTACTTATTAGATCTTGGGGTTGATTACATCAACCCTTATGATGCTTCTTCTCGAATCAATAAAGTTATTATGCCGGAGTTCATTTTGATTGGAGTTTTGTGCCTCTTCTATCTTCTGACGGGGTATTGGATTATGTCTTTGCTTTGTGGGCCCTACATTTATTATAATCTTACACGATAAGGGCTTTCATTTTTTTTTTTTTAAATTCGTCACTGTTCGAGCCAATTTGCGTACACTTTCTTCTCCCTTACATTAGTGATTTTTTTTCTTCATGTGATCAGGTATCTACGAAGGCAGCACCTGATAGATGTTACTGAGATATTCAATATGTTAACTTGGGAAAAGAAGCAAAGGCTTTACAAACTAGCATATCTACTTTTCCTCTTCCTCTCTACATTGTGGTATATCGAAAATAACTTTTCATGTCGTTGTGTTGTTACCTAATGCCATCTTCTTCATTGCATCTACTAATTTCTAGTAAAACAAAATATTGACTAGTTTTGTCTCATGTTCGAAAGCTACACAAGCTACTATTCTCATTATTAATTAGTTTCGAAGTGAAATGCTACCGTATTTAATGAAATGGTTGAAATTACTCAACTAAGTCCATGTTACCTTTTAAACCTTTGATATGCCAACTTTACTTAATGGACTGAATCACAATGGCTCACTAATCTAAAATCAAGTACTTTTGAAGTAGTTGATAGAGGAATAATTCCAACTACAAGAAACCAGATTATTGATTATTACTAATCTAAAATTAAAACTAAATTCCGAAAATAATTAGGAAAGAAAAGAAAACGTACTAGTAACGTCAATCATGGATACTTTGCGAAAACACCATTTATGACTTATTTTTTTAAGTAGTCTTTAACATGATAATAGAGTAGTGTTAGCGAAGGCACTCGACGATGACATCCATCGAAAGTAG ATGGCAGATCTATATGTGTGGCTTCTATCATTCTTCTTCCTCATAGCTCTTCTCATACTCCTTGCTTATCAGCTCTTGTACTTATTAGATCTTGGGGTTGATTACATCAACCCTTATGATGCTTCTTCTCGAATCAATAAAGTTATTATGCCGGAGTTCATTTTGATTGGAGTTTTGTGCCTCTTCTATCTTCTGACGGGGTATTGGATTATGTATCTACGAAGGCAGCACCTGATAGATGTTACTGAGATATTCAATATGTTAACTTGGGAAAAGAAGCAAAGGCTTTACAAACTAGCATATCTACTTTTCCTCTTCCTCTCTACATTGTGGTATATCGAAAATAACTTTTCATTAGTGTTAGCGAAGGCACTCGACGATGACATCCATCGAAAGTAG ATGGCAGATCTATATGTGTGGCTTCTATCATTCTTCTTCCTCATAGCTCTTCTCATACTCCTTGCTTATCAGCTCTTGTACTTATTAGATCTTGGGGTTGATTACATCAACCCTTATGATGCTTCTTCTCGAATCAATAAAGTTATTATGCCGGAGTTCATTTTGATTGGAGTTTTGTGCCTCTTCTATCTTCTGACGGGGTATTGGATTATGTATCTACGAAGGCAGCACCTGATAGATGTTACTGAGATATTCAATATGTTAACTTGGGAAAAGAAGCAAAGGCTTTACAAACTAGCATATCTACTTTTCCTCTTCCTCTCTACATTGTGGTATATCGAAAATAACTTTTCATTAGTGTTAGCGAAGGCACTCGACGATGACATCCATCGAAAGTAG MADLYVWLLSFFFLIALLILLAYQLLYLLDLGVDYINPYDASSRINKVIMPEFILIGVLCLFYLLTGYWIMYLRRQHLIDVTEIFNMLTWEKKQRLYKLAYLLFLFLSTLWYIENNFSLVLAKALDDDIHRK Homology
BLAST of Sed0026529 vs. NCBI nr
Match: XP_038876883.1 (protein cornichon homolog 4-like [Benincasa hispida]) HSP 1 Score: 162.2 bits (409), Expect = 3.2e-36 Identity = 94/143 (65.73%), Postives = 107/143 (74.83%), Query Frame = 0
BLAST of Sed0026529 vs. NCBI nr
Match: XP_004147951.1 (protein cornichon homolog 4 [Cucumis sativus] >XP_011650427.1 protein cornichon homolog 4 [Cucumis sativus] >KGN55923.1 hypothetical protein Csa_010358 [Cucumis sativus]) HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35 Identity = 94/143 (65.73%), Postives = 107/143 (74.83%), Query Frame = 0
BLAST of Sed0026529 vs. NCBI nr
Match: XP_023005595.1 (protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35 Identity = 91/128 (71.09%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of Sed0026529 vs. NCBI nr
Match: XP_023539252.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35 Identity = 90/128 (70.31%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of Sed0026529 vs. NCBI nr
Match: XP_022943501.1 (protein cornichon homolog 4-like [Cucurbita moschata]) HSP 1 Score: 158.3 bits (399), Expect = 4.6e-35 Identity = 90/128 (70.31%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of Sed0026529 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 6.4e-32 Identity = 75/128 (58.59%), Postives = 96/128 (75.00%), Query Frame = 0
BLAST of Sed0026529 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 3.3e-28 Identity = 71/128 (55.47%), Postives = 91/128 (71.09%), Query Frame = 0
BLAST of Sed0026529 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2) HSP 1 Score: 116.3 bits (290), Expect = 2.6e-25 Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 0
BLAST of Sed0026529 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2) HSP 1 Score: 114.4 bits (285), Expect = 9.9e-25 Identity = 61/130 (46.92%), Postives = 89/130 (68.46%), Query Frame = 0
BLAST of Sed0026529 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.3e-20 Identity = 57/141 (40.43%), Postives = 92/141 (65.25%), Query Frame = 0
BLAST of Sed0026529 vs. ExPASy TrEMBL
Match: A0A6J1KXU1 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 7.6e-36 Identity = 91/128 (71.09%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of Sed0026529 vs. ExPASy TrEMBL
Match: A0A0A0L2G6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036490 PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 7.6e-36 Identity = 94/143 (65.73%), Postives = 107/143 (74.83%), Query Frame = 0
BLAST of Sed0026529 vs. ExPASy TrEMBL
Match: A0A6J1FRW5 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 PE=3 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.2e-35 Identity = 90/128 (70.31%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of Sed0026529 vs. ExPASy TrEMBL
Match: A0A1S3BLR3 (protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 PE=3 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 3.8e-35 Identity = 92/143 (64.34%), Postives = 106/143 (74.13%), Query Frame = 0
BLAST of Sed0026529 vs. ExPASy TrEMBL
Match: A0A6J1HL36 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.9e-34 Identity = 90/143 (62.94%), Postives = 106/143 (74.13%), Query Frame = 0
BLAST of Sed0026529 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein ) HSP 1 Score: 138.3 bits (347), Expect = 4.5e-33 Identity = 75/128 (58.59%), Postives = 96/128 (75.00%), Query Frame = 0
BLAST of Sed0026529 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein ) HSP 1 Score: 125.9 bits (315), Expect = 2.3e-29 Identity = 71/128 (55.47%), Postives = 91/128 (71.09%), Query Frame = 0
BLAST of Sed0026529 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26 Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 0
BLAST of Sed0026529 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein ) HSP 1 Score: 114.4 bits (285), Expect = 7.0e-26 Identity = 61/130 (46.92%), Postives = 89/130 (68.46%), Query Frame = 0
BLAST of Sed0026529 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein ) HSP 1 Score: 99.4 bits (246), Expect = 2.3e-21 Identity = 57/141 (40.43%), Postives = 92/141 (65.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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