Sed0026438 (gene) Chayote v1

Overview


Name	Sed0026438
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Non-specific lipid-transfer protein-like protein
Location	LG03: 5176380 .. 5178481 (+)
RNA-Seq Expression	Sed0026438
Synteny	Sed0026438

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATTGGCGATGATTTCGAGCGCGGTTCTGTTCGCGGCGACCTGCATTGCAGCGATTGCGAGCGCAGCGTCGGCGGCGGATTGCTCGGCGGTGGTGATGGAGATGCTGCCGTGCGTGGATTACATCACGATCGGAGGCACGGCGGCGACGCCCTCCGACACGTGCTGCACGGCGACGGAAGATCTGTTGAAGACGAACGGCGAATGTGTGTGCGAAGAGTTGAAGCAGAGCGGCGGGCTTCAATTCAACCTTACCAGAGCGATTAGCCTTCCGGCAGCCTGTGGAATTTCTAGTCCTCTTCCTGATTGCGGCAGTGCGTTTCATTTTACTACCGATTTCAACATCCTTCGTTCCTAAGTTTCCAATCCAGATTCTGAATTTTTTTTTTTCTTTGGCAGTTCCTCTTCCGCCTGGTATGGAACCTGCTCTAGTTCCGAGTTCTAAAGCGCGGCCGCCAGTTCCCGGTGCTGCAGCGCCGACGCCATTTCCAGGCTCTAGACCGCCAATGCCATTTCCTGGATCTAAAGCGCCAACGCCATTTCCTGGTTCTAGAGCCCCAACGCCATTTCCAGCTGGTTCTAAAGCGCCAACGTCATTTCCAGGATCTAAAGCGCCAACTCCATTTCCAGCTGGTTCTAAAGCTCCAACTCCATTTCCAGTTTCTAAAGCTCCAACGCCATTTCCAGGTTCTAGAGCCCCAACGCCATTTCCAGGATCTAGAGCGCCAACGCAAGCTCCGTTTTCGAGGGCTCCTGGTCCAAGTAGAAAAATGCTCGCACCTGCTCCCAGTATGGTCCCCACGCTTTCTCCAGGTACCATTCCTTGAAATAAAAACTTTATTTAATCCCTTGCTTCTATTTCATACTATTTTATATTTTATATTTAATTTTTAATTTTTAAAATTTAAATCTACCATAATTATTTTACTATGTAATTTTTTTTTTCTTAAATTTTTACATTTTACTTATATATATAAATCAATTTCTAAATTTTATACTTTAACCTTTAAATTTTAAGATGTTAAGCTTAAAAAAATTGTTTTCAATTCAATTTTCATTTAAGTTTTAAGTTTCAAGATTTTATTTTTTAATCTCTAATTTTAGAATAGTTTCAAGATTTTCTAATAAAATTTTGTTGATTAAAAACGGACTGTAATTAAATTATTATTATTTTTAGTAAATTTGCATCATTAATAAATAAATTTTAAAATCTACATCATAGAATTTTAAAGTAGTGAATATATAGTTTATGCAAATAACTAAAAGTGAACAGTCGTAATAGAGCATAGTGATAAAAATATAACATTTAGAGTACTACAAATTAAATCAAAGCTAAACTCAAAACTTGAGATTAAAAATATAACATTTTGAAATTAAAAAATAAATGAAAACTAAAATTGAAAGTTAATAAAAACCATACTCTCTAATTTTTTTTTTATAATACTTTTATTAAATTACTCCTATTCATATATATCCTTTTTTGAGATCATAATTAGGATAATTTAAGGGGCCAAAATTCGATCCGCAAGAAAAAAAGACTCAAAAATCATTTTTTAATATAAAGTTACCTGTTCCTGTCAAATAAAAATAAATTTATTTACGTAATCACATTTGTTGTTCGATATATGTAATATAATATATTTATTTTTTAAAAAATATTAAGAGCCATTCACATTTTTTTTTCCTGTAGATTTCAAGTATGAAATTTATTATAAAATTAATAATATGAATAATATTTTTTAATGAAAGAATAAAATACAAATTTCTAAAGGCTAAATTATATATAGAATAAAAACATAGAGTTGATTTCAAATATGTTTGTTTTGTTTGATTTAATTACATGAACTAAGCAATAGCTCTGATATCATGCGTAATGTAATGGTTGTAGTTGACCCACTAGCTCCTGCAACACTAACACCAGAAATGCCCCCAAGCAACGCACCATCGTCGCCGCCATCACCTTTAGGCCCATCGAGTGACGATGACTTACCGGAGTTGGCACCGTCACCGTCACAGTCAAATGCCCCGTTCTTCGCTATTTCCTATAACCTGATCGTGCCACTTCTGCTCACCCTTCTCGCTTCATTTCAACCATTGTGA

mRNA sequence

ATGACATTGGCGATGATTTCGAGCGCGGTTCTGTTCGCGGCGACCTGCATTGCAGCGATTGCGAGCGCAGCGTCGGCGGCGGATTGCTCGGCGGTGGTGATGGAGATGCTGCCGTGCGTGGATTACATCACGATCGGAGGCACGGCGGCGACGCCCTCCGACACGTGCTGCACGGCGACGGAAGATCTGTTGAAGACGAACGGCGAATGTGTGTGCGAAGAGTTGAAGCAGAGCGGCGGGCTTCAATTCAACCTTACCAGAGCGATTAGCCTTCCGGCAGCCTGTGGAATTTCTAGTCCTCTTCCTGATTGCGGCAGTGCGTTTCATTTTACTACCGATTTCAACATCCTTCTTCCTCTTCCGCCTGGTATGGAACCTGCTCTAGTTCCGAGTTCTAAAGCGCGGCCGCCAGTTCCCGGTGCTGCAGCGCCGACGCCATTTCCAGGCTCTAGACCGCCAATGCCATTTCCTGGATCTAAAGCGCCAACGCCATTTCCTGTTGACCCACTAGCTCCTGCAACACTAACACCAGAAATGCCCCCAAGCAACGCACCATCGTCGCCGCCATCACCTTTAGGCCCATCGAGTGACGATGACTTACCGGAGTTGGCACCGTCACCGTCACAGTCAAATGCCCCGTTCTTCGCTATTTCCTATAACCTGATCGTGCCACTTCTGCTCACCCTTCTCGCTTCATTTCAACCATTGTGA

Coding sequence (CDS)

ATGACATTGGCGATGATTTCGAGCGCGGTTCTGTTCGCGGCGACCTGCATTGCAGCGATTGCGAGCGCAGCGTCGGCGGCGGATTGCTCGGCGGTGGTGATGGAGATGCTGCCGTGCGTGGATTACATCACGATCGGAGGCACGGCGGCGACGCCCTCCGACACGTGCTGCACGGCGACGGAAGATCTGTTGAAGACGAACGGCGAATGTGTGTGCGAAGAGTTGAAGCAGAGCGGCGGGCTTCAATTCAACCTTACCAGAGCGATTAGCCTTCCGGCAGCCTGTGGAATTTCTAGTCCTCTTCCTGATTGCGGCAGTGCGTTTCATTTTACTACCGATTTCAACATCCTTCTTCCTCTTCCGCCTGGTATGGAACCTGCTCTAGTTCCGAGTTCTAAAGCGCGGCCGCCAGTTCCCGGTGCTGCAGCGCCGACGCCATTTCCAGGCTCTAGACCGCCAATGCCATTTCCTGGATCTAAAGCGCCAACGCCATTTCCTGTTGACCCACTAGCTCCTGCAACACTAACACCAGAAATGCCCCCAAGCAACGCACCATCGTCGCCGCCATCACCTTTAGGCCCATCGAGTGACGATGACTTACCGGAGTTGGCACCGTCACCGTCACAGTCAAATGCCCCGTTCTTCGCTATTTCCTATAACCTGATCGTGCCACTTCTGCTCACCCTTCTCGCTTCATTTCAACCATTGTGA

Protein sequence

MTLAMISSAVLFAATCIAAIASAASAADCSAVVMEMLPCVDYITIGGTAATPSDTCCTATEDLLKTNGECVCEELKQSGGLQFNLTRAISLPAACGISSPLPDCGSAFHFTTDFNILLPLPPGMEPALVPSSKARPPVPGAAAPTPFPGSRPPMPFPGSKAPTPFPVDPLAPATLTPEMPPSNAPSSPPSPLGPSSDDDLPELAPSPSQSNAPFFAISYNLIVPLLLTLLASFQPL

Homology

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BLAST of Sed0026438 vs. NCBI nr
Match: XP_038875880.1 (extensin-like [Benincasa hispida])

HSP 1 Score: 136.7 bits (343), Expect = 2.5e-28
Identity = 124/344 (36.05%), Postives = 158/344 (45.93%), Query Frame = 0


Query: 1   MTLAMISSAVLFAATCIAAIASAA------SAADCSAVVMEMLPCVDYITIGGTAATPSD 60
           M ++MI S  +   TCI+AIASA       SAADCSA   +ML C+DYITIG T A  S+
Sbjct: 1   MAMSMIWSLGVL-VTCISAIASATSPSPAPSAADCSAAAFQMLTCMDYITIGSTKANASN 60

Query: 61  TCCTATEDLLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAFHFTT 120
            CC    +++K+ G+C+C+ LKQSG  G+  NLTRAI LPAACGIS+ LPDCG       
Sbjct: 61  VCCKVVREVMKSKGDCMCDVLKQSGKMGIHLNLTRAIGLPAACGISTSLPDCG------- 120

Query: 121 DFNILLPLPPGMEPALV------------------------------------------- 180
                +PLPPGM PA V                                           
Sbjct: 121 -----IPLPPGMAPAPVPRTKAPTPAPRIVVPTPAPTTKAPAPVPRTKAPTPAQRIVVPT 180

Query: 181 --------------------------------------------------------PSSK 237
                                                                   P++K
Sbjct: 181 PAPTIKAPAPVPRTKAPTPAQRIVVPTPAPTTKAPAPVPRTKAPTPAPRIVVPTPAPTTK 240

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BLAST of Sed0026438 vs. NCBI nr
Match: KAA0067412.1 (SH3 domain-containing protein C23A1.17-like [Cucumis melo var. makuwa] >TYK26549.1 SH3 domain-containing protein C23A1.17-like [Cucumis melo var. makuwa])

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-27
Identity = 111/273 (40.66%), Postives = 141/273 (51.65%), Query Frame = 0


Query: 1   MTLAMISSAVLFAATCIAAIASA--------ASAADCSAVVMEMLPCVDYITIGGTAATP 60
           MT+ MIS+  LF  TCI AIASA          A DCS +V  +LPCVDY+TIG T A  
Sbjct: 1   MTMGMISNLSLF-LTCIVAIASANPPSPSPGPGAGDCSVLVFHILPCVDYLTIGSTKANA 60

Query: 61  SDTCCTATEDLLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAF-- 120
           S  CC   ++ ++ + EC+C++LKQS   G+  N+TR I LPAACGI   LP+C  A   
Sbjct: 61  SQVCCEVLKNTMEPSAECMCDQLKQSDKMGIHLNITRVIGLPAACGIPISLPECDIALPP 120

Query: 121 ------------------HFTTDFNILLPLPPGMEPALVPSSKARPPVPGAAAPTPFPGS 180
                                   N   P P    P+L P+ +A  P+P   AP+P P  
Sbjct: 121 APVPSTKAPTPAPVTKTPTPAPITNSPTPAPNKQAPSLAPNKQAPSPIPNKQAPSPTPNK 180

Query: 181 RPPMPFPGSKAPTPFPVDPLAPATLTPEMPPSNAP-SSPPSPLGPSSDDDLP------EL 237
           + P P    +AP+P      AP T+ P   P N P  SPP+P  P S D  P      E 
Sbjct: 181 QAPSPTSNKQAPSP------APTTVVPAPTPVNHPIVSPPAPEVPPSSDLTPSNGPSGED 240

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BLAST of Sed0026438 vs. NCBI nr
Match: XP_022993468.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima])

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-26
Identity = 100/246 (40.65%), Postives = 133/246 (54.07%), Query Frame = 0


Query: 1   MTLAMISSAVLFAATCIAAIA--------SAASAADCSAVVMEMLPCVDYITIGGTAATP 60
           M +++I S  LF   CIAA+A         A SA DCSAVV +M+PCV+Y TIG T A  
Sbjct: 1   MAMSIIPSLALF-TICIAAVAVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANA 60

Query: 61  SDTCCTATEDLLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAFHF 120
           S  CC   +D++K+ G+C+C+ LKQ+G  G+Q N TRA+ LPAACG  + L DC      
Sbjct: 61  STDCCKVVKDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACGSPTSLADC------ 120

Query: 121 TTDFNILLPLPPGMEPALVPSSKARPPVPGAAAPTPFPGSRPPMPFPGSKAPTPFPVDPL 180
                  + + P M    VPS+KA  P   A  P+  P ++PP P P S +PT  PV P 
Sbjct: 121 ------TIAVSPAMASPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHTPVSPP 180

Query: 181 APATLTPEMPPSNAPSSPPSPLGPSSDDDLPELAPSPSQSNAPFFAISYNLIVPLLLTLL 237
           +P    PE+ PS  P   P+P    SDD++       S S   F   S  +++P  L LL
Sbjct: 181 SPPAPPPELAPSRVPVEAPAP----SDDEMGPSGEDSSASALSFTTCSSLIVLP--LALL 227

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BLAST of Sed0026438 vs. NCBI nr
Match: XP_022939816.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata] >KAG7016532.1 Non-specific lipid-transfer protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-25
Identity = 98/246 (39.84%), Postives = 132/246 (53.66%), Query Frame = 0


Query: 1   MTLAMISSAVLFAATCIAAIA--------SAASAADCSAVVMEMLPCVDYITIGGTAATP 60
           M +++I S  LF   CIAA+A         A SA DCSAVV +M+PCV+Y TIG T +  
Sbjct: 1   MAMSIIPSLALF-TICIAAVAVAGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNA 60

Query: 61  SDTCCTATEDLLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAFHF 120
           S  CC   +D++K+  +C+C+ LKQ+G  G+Q N TRA+ LPA CG  + L DC      
Sbjct: 61  STDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADC------ 120

Query: 121 TTDFNILLPLPPGMEPALVPSSKARPPVPGAAAPTPFPGSRPPMPFPGSKAPTPFPVDPL 180
                  + + P M P  VPS+KA  P   A  P+  P ++PP P P S +PT  PV P 
Sbjct: 121 ------TIAVSPVMAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPP 180

Query: 181 APATLTPEMPPSNAPSSPPSPLGPSSDDDLPELAPSPSQSNAPFFAISYNLIVPLLLTLL 237
           +P     E+ PS  P   P+P    SDDD+   +   S S   F   S  +++P  L LL
Sbjct: 181 SPPAPPQELAPSRVPVEAPAP----SDDDMGPSSEDSSASATSFTTCSSLIVLP--LALL 227

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BLAST of Sed0026438 vs. NCBI nr
Match: XP_008460480.1 (PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 3.4e-25
Identity = 109/276 (39.49%), Postives = 139/276 (50.36%), Query Frame = 0


Query: 1   MTLAMISSAVLFAATCIAAIASA--------ASAADCSAVVMEMLPCVDYITIGGTAATP 60
           MT+ MIS+  LF  TCI AIASA          A DCS +V  +LPCVDY+TIG T A  
Sbjct: 1   MTMGMISNLSLF-LTCIVAIASANPPSPSPGPGAGDCSVLVFHILPCVDYLTIGSTKANA 60

Query: 61  SDTCCTATEDLLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAF-- 120
           S  CC   ++ ++ + EC+C++LKQS   G+  N+TR + LPAACGI   LP+C  A   
Sbjct: 61  SQVCCEVLKNTMEPSAECMCDQLKQSDKMGIHLNITRVVGLPAACGIPISLPECDIALPP 120

Query: 121 ------------------HFTTDFNILLPLPPGMEPALVPSSKARPPVPGAAAPTPFPGS 180
                                   N   P P    P+L P+ +A    P   AP+P P  
Sbjct: 121 APVPSTKAPTPAPVTKTPTPAPITNSPTPAPNKQAPSLAPNKQAPSLAPNKQAPSPIPNK 180

Query: 181 RPPMPFPGSKAPTPF---PVDPLAPATLTPEMPPSNAP-SSPPSPLGPSSDDDLP----- 237
           + P P P  +AP+P         AP T+ P   P N P  SPP+P  P S D  P     
Sbjct: 181 QAPSPTPNKQAPSPTSNKQAPSPAPTTVVPAPTPVNHPIVSPPAPEVPPSSDLTPSNGPS 240

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BLAST of Sed0026438 vs. ExPASy Swiss-Prot
Match: Q9FY78 (Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3702 GN=LTPG29 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 43/126 (34.13%), Postives = 75/126 (59.52%), Query Frame = 0


Query: 26  AADCSAVVMEMLPCVDYITIGGTAATPSDTCCTATEDLLKTNGECVCEELKQSG-GLQFN 85
           A+DC  +V+ + PC+ +I+IGGTA TP+ +CC++ +++L T   C+CE LK++  G++ N
Sbjct: 25  ASDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTKPICLCEGLKKAPLGIKLN 84

Query: 86  LTRAISLPAACGISS-PLPDCGSAFHFTTDFNILLPLPPGMEPALVPSSKARPPVPGAA- 145
           +T++ +LP AC +++ P+  C S                 + PA  P++  + PV G+  
Sbjct: 85  VTKSATLPVACKLNAPPVSACDS-----------------LPPASPPTANGQAPVWGSGW 133

Query: 146 APTPFP 149
           AP P P
Sbjct: 145 APAPSP 133

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BLAST of Sed0026438 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.5e-11
Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 0


Query: 1   MTLAMISSAVLFAATCIAAIASAASAADCSAVVMEMLPCVDYITIGGTAATPSDTCCTAT 60
           + L  +SS  +  A+   A A A S  DCS +++ M  C+ +++ GGT A P  TCC+  
Sbjct: 16  IVLLSLSSVSVLGASHHHATAPAPS-VDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGL 75

Query: 61  EDLLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSP-LPDCGSAFHFTTDFNIL 120
           + +LK + +C+CE  K S   G+  N+T+A +LPAAC + +P +  CG            
Sbjct: 76  KTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCG------------ 135

Query: 121 LPLPPGMEPALVPS-SKARPPVPGAAAPTPFPGS 151
           L + P   P L P  + A P   G  AP P  G+
Sbjct: 136 LSVAPSTAPGLAPGVAAAGPETAGFLAPNPSSGN 156

[Close]

BLAST of Sed0026438 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.5e-11
Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 0


Query: 3   LAMISSAVLFAATCIAAIASAASAADCSAVVMEMLPCVDYITIGGTAATPSDTCCTATED 62
           +A  +  ++F+   + +   A +A DCS++++ M  C+ ++T G T   P  TCC+  + 
Sbjct: 1   MAYATILMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKT 60

Query: 63  LLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAFHFTTDFNILLPL 122
           +++T  EC+CE  K SG  GL  +L++A SLP+ C +++P P        + D       
Sbjct: 61  VVRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAP-PSARCGLSVSGD------- 120

Query: 123 PPGMEPALVPSSKARPPVPGAAAPTPFPGSRP 153
           PP   P L P++ A  P   + A    P S P
Sbjct: 121 PPATAPGLSPTAGAGAPALSSGANAATPVSSP 144

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BLAST of Sed0026438 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.1e-09
Identity = 50/156 (32.05%), Postives = 74/156 (47.44%), Query Frame = 0


Query: 13  AATCIAAIASAASAADCSAVVMEMLPCVDYITIGGTAATPSDTCCTATEDLLKTNGECVC 72
           A + + A A   S++DCS V+  M+ C+ Y+ +G     P  +CCT  E +L+ N +C+C
Sbjct: 32  AKSPVGAPAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCIC 91

Query: 73  EELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAFHFTTDFNILLPLPPGMEPALVP 132
             L  +G  G++ N TRA++ P AC +S   P CG      T         PG  P  V 
Sbjct: 92  AGLVSAGEMGIELNSTRALATPKACKLSIAPPHCGIITSGAT--------TPGASP--VS 151

Query: 133 SSKARPPVPGAAAPTPFPGSRPPM--PFPGSKAPTP 165
            S   P    +AA +P   +  P     P   AP+P
Sbjct: 152 PSAGAPTTSPSAAKSPETSATSPSSDETPSMTAPSP 177

[Close]

BLAST of Sed0026438 vs. ExPASy Swiss-Prot
Match: Q2PE60 (Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3702 GN=LTPG23 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.7e-04
Identity = 56/222 (25.23%), Postives = 102/222 (45.95%), Query Frame = 0


Query: 17  IAAIASAASAADCSAVVMEMLPCVDYITIGGTAATPSDTCCTATEDLLKTNGECVCEELK 76
           +A     +++ DCS+V+  M+ C+ ++T+G T  +P+ TCC   + +L  + +C+C  L+
Sbjct: 33  MAPTPQPSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALE 92

Query: 77  QSGGLQFNL--TRAISLPAACGISSPLPDCGSAFHFTTDFNILLPLPPGMEPALVPSSKA 136
            S  + F L  T+A+++P  C +    P+C      +T        PP   P   PSS  
Sbjct: 93  SSREMGFVLDDTKALAMPKICNVPID-PNC----DVSTPAASTPVSPPVESPTTSPSSAK 152

Query: 137 RPPVPGAA-----APTPFPGSRPPMPF---PGSKAPTPFPVDPLAPATLTPEMPPSNAPS 196
            P +  ++     +P P   S PP+     P S +  P      A +  +P +  S+   
Sbjct: 153 SPAITPSSPAVSHSPPPVRHSSPPVSHSSPPVSHSSPPTSRSSPAVSHSSPVVAASSPVK 212

Query: 197 SPPSPLGPSSDDDLPELAPSPSQSNAPFFAISYNLIVPLLLT 229
           +  S    S     P  +PSPS S++    +S   I  ++++
Sbjct: 213 AVSSSTASSPRAASPSPSPSPSISSSGILLVSKLFIAVVMVS 249

[Close]

BLAST of Sed0026438 vs. ExPASy TrEMBL
Match: A0A5D3DSV8 (SH3 domain-containing protein C23A1.17-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001470 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 6.1e-28
Identity = 111/273 (40.66%), Postives = 141/273 (51.65%), Query Frame = 0


Query: 1   MTLAMISSAVLFAATCIAAIASA--------ASAADCSAVVMEMLPCVDYITIGGTAATP 60
           MT+ MIS+  LF  TCI AIASA          A DCS +V  +LPCVDY+TIG T A  
Sbjct: 1   MTMGMISNLSLF-LTCIVAIASANPPSPSPGPGAGDCSVLVFHILPCVDYLTIGSTKANA 60

Query: 61  SDTCCTATEDLLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAF-- 120
           S  CC   ++ ++ + EC+C++LKQS   G+  N+TR I LPAACGI   LP+C  A   
Sbjct: 61  SQVCCEVLKNTMEPSAECMCDQLKQSDKMGIHLNITRVIGLPAACGIPISLPECDIALPP 120

Query: 121 ------------------HFTTDFNILLPLPPGMEPALVPSSKARPPVPGAAAPTPFPGS 180
                                   N   P P    P+L P+ +A  P+P   AP+P P  
Sbjct: 121 APVPSTKAPTPAPVTKTPTPAPITNSPTPAPNKQAPSLAPNKQAPSPIPNKQAPSPTPNK 180

Query: 181 RPPMPFPGSKAPTPFPVDPLAPATLTPEMPPSNAP-SSPPSPLGPSSDDDLP------EL 237
           + P P    +AP+P      AP T+ P   P N P  SPP+P  P S D  P      E 
Sbjct: 181 QAPSPTSNKQAPSP------APTTVVPAPTPVNHPIVSPPAPEVPPSSDLTPSNGPSGED 240

[Close]

BLAST of Sed0026438 vs. ExPASy TrEMBL
Match: A0A6J1K2B1 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima OX=3661 GN=LOC111489469 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.8e-27
Identity = 100/246 (40.65%), Postives = 133/246 (54.07%), Query Frame = 0


Query: 1   MTLAMISSAVLFAATCIAAIA--------SAASAADCSAVVMEMLPCVDYITIGGTAATP 60
           M +++I S  LF   CIAA+A         A SA DCSAVV +M+PCV+Y TIG T A  
Sbjct: 1   MAMSIIPSLALF-TICIAAVAVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANA 60

Query: 61  SDTCCTATEDLLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAFHF 120
           S  CC   +D++K+ G+C+C+ LKQ+G  G+Q N TRA+ LPAACG  + L DC      
Sbjct: 61  STDCCKVVKDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACGSPTSLADC------ 120

Query: 121 TTDFNILLPLPPGMEPALVPSSKARPPVPGAAAPTPFPGSRPPMPFPGSKAPTPFPVDPL 180
                  + + P M    VPS+KA  P   A  P+  P ++PP P P S +PT  PV P 
Sbjct: 121 ------TIAVSPAMASPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHTPVSPP 180

Query: 181 APATLTPEMPPSNAPSSPPSPLGPSSDDDLPELAPSPSQSNAPFFAISYNLIVPLLLTLL 237
           +P    PE+ PS  P   P+P    SDD++       S S   F   S  +++P  L LL
Sbjct: 181 SPPAPPPELAPSRVPVEAPAP----SDDEMGPSGEDSSASALSFTTCSSLIVLP--LALL 227

[Close]

BLAST of Sed0026438 vs. ExPASy TrEMBL
Match: A0A6J1FGX0 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita moschata OX=3662 GN=LOC111445576 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 9.7e-26
Identity = 98/246 (39.84%), Postives = 132/246 (53.66%), Query Frame = 0


Query: 1   MTLAMISSAVLFAATCIAAIA--------SAASAADCSAVVMEMLPCVDYITIGGTAATP 60
           M +++I S  LF   CIAA+A         A SA DCSAVV +M+PCV+Y TIG T +  
Sbjct: 1   MAMSIIPSLALF-TICIAAVAVAGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNA 60

Query: 61  SDTCCTATEDLLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAFHF 120
           S  CC   +D++K+  +C+C+ LKQ+G  G+Q N TRA+ LPA CG  + L DC      
Sbjct: 61  STDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADC------ 120

Query: 121 TTDFNILLPLPPGMEPALVPSSKARPPVPGAAAPTPFPGSRPPMPFPGSKAPTPFPVDPL 180
                  + + P M P  VPS+KA  P   A  P+  P ++PP P P S +PT  PV P 
Sbjct: 121 ------TIAVSPVMAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPP 180

Query: 181 APATLTPEMPPSNAPSSPPSPLGPSSDDDLPELAPSPSQSNAPFFAISYNLIVPLLLTLL 237
           +P     E+ PS  P   P+P    SDDD+   +   S S   F   S  +++P  L LL
Sbjct: 181 SPPAPPQELAPSRVPVEAPAP----SDDDMGPSSEDSSASATSFTTCSSLIVLP--LALL 227

[Close]

BLAST of Sed0026438 vs. ExPASy TrEMBL
Match: A0A1S3CC53 (SH3 domain-containing protein C23A1.17-like OS=Cucumis melo OX=3656 GN=LOC103499284 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.7e-25
Identity = 109/276 (39.49%), Postives = 139/276 (50.36%), Query Frame = 0


Query: 1   MTLAMISSAVLFAATCIAAIASA--------ASAADCSAVVMEMLPCVDYITIGGTAATP 60
           MT+ MIS+  LF  TCI AIASA          A DCS +V  +LPCVDY+TIG T A  
Sbjct: 1   MTMGMISNLSLF-LTCIVAIASANPPSPSPGPGAGDCSVLVFHILPCVDYLTIGSTKANA 60

Query: 61  SDTCCTATEDLLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAF-- 120
           S  CC   ++ ++ + EC+C++LKQS   G+  N+TR + LPAACGI   LP+C  A   
Sbjct: 61  SQVCCEVLKNTMEPSAECMCDQLKQSDKMGIHLNITRVVGLPAACGIPISLPECDIALPP 120

Query: 121 ------------------HFTTDFNILLPLPPGMEPALVPSSKARPPVPGAAAPTPFPGS 180
                                   N   P P    P+L P+ +A    P   AP+P P  
Sbjct: 121 APVPSTKAPTPAPVTKTPTPAPITNSPTPAPNKQAPSLAPNKQAPSLAPNKQAPSPIPNK 180

Query: 181 RPPMPFPGSKAPTPF---PVDPLAPATLTPEMPPSNAP-SSPPSPLGPSSDDDLP----- 237
           + P P P  +AP+P         AP T+ P   P N P  SPP+P  P S D  P     
Sbjct: 181 QAPSPTPNKQAPSPTSNKQAPSPAPTTVVPAPTPVNHPIVSPPAPEVPPSSDLTPSNGPS 240

[Close]

BLAST of Sed0026438 vs. ExPASy TrEMBL
Match: A0A0A0KN80 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G396010 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.6e-23
Identity = 100/222 (45.05%), Postives = 124/222 (55.86%), Query Frame = 0


Query: 1   MTLAMISSAVLFAATCIAAIASAAS------AADCSAVVMEMLPCVDYITIGGTAATPSD 60
           MT+ MIS+  LF  TCI AIASA S      A DCS VV +MLPCVDY+TIG T A  S 
Sbjct: 1   MTMGMISTLGLF-LTCIVAIASAGSPSPGSNAGDCSEVVFQMLPCVDYLTIGSTKANASL 60

Query: 61  TCCTATEDLLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAFHFTT 120
            CC   ++ L+   +C+C+ LKQS   G+  N +RAI+LPAACGIS+ LPDC  A     
Sbjct: 61  VCCEVLKNALEPRPDCMCDVLKQSDKMGIHLNNSRAIALPAACGISTSLPDCDIA----- 120

Query: 121 DFNILLPLPPGMEPALVPSSKARPPVPGAAAPTPFPGSRPPMPFPGSKAPTPFPV---DP 180
                  L  GM PA +PS+KA    P A  PT  P +R P P P ++ PTP PV     
Sbjct: 121 -------LTQGMAPAPIPSTKAPTLAPLAKTPTLAPLTRTPTPAPLTRTPTPAPVIKTPT 180

Query: 181 LAPATLTPEMPPSNAPSSPPSPLGPSSDDDLPELAPSPSQSN 212
            AP T TP  P     +  P+PL  S        APSP+++N
Sbjct: 181 PAPFTRTP-TPAPLTKTPTPAPLTNSPTPAPNNQAPSPARNN 208

[Close]

BLAST of Sed0026438 vs. TAIR 10
Match: AT5G09370.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-13
Identity = 31/76 (40.79%), Postives = 57/76 (75.00%), Query Frame = 0


Query: 26  AADCSAVVMEMLPCVDYITIGGTAATPSDTCCTATEDLLKTNGECVCEELKQSG-GLQFN 85
           A+DC  +V+ + PC+ +I+IGGTA TP+ +CC++ +++L T   C+CE LK++  G++ N
Sbjct: 25  ASDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTKPICLCEGLKKAPLGIKLN 84

Query: 86  LTRAISLPAACGISSP 101
           +T++ +LP AC +++P
Sbjct: 85  VTKSATLPVACKLNAP 100

[Close]

BLAST of Sed0026438 vs. TAIR 10
Match: AT5G09370.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 9.3e-13
Identity = 43/126 (34.13%), Postives = 75/126 (59.52%), Query Frame = 0


Query: 26  AADCSAVVMEMLPCVDYITIGGTAATPSDTCCTATEDLLKTNGECVCEELKQSG-GLQFN 85
           A+DC  +V+ + PC+ +I+IGGTA TP+ +CC++ +++L T   C+CE LK++  G++ N
Sbjct: 25  ASDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTKPICLCEGLKKAPLGIKLN 84

Query: 86  LTRAISLPAACGISS-PLPDCGSAFHFTTDFNILLPLPPGMEPALVPSSKARPPVPGAA- 145
           +T++ +LP AC +++ P+  C S                 + PA  P++  + PV G+  
Sbjct: 85  VTKSATLPVACKLNAPPVSACDS-----------------LPPASPPTANGQAPVWGSGW 133

Query: 146 APTPFP 149
           AP P P
Sbjct: 145 APAPSP 133

[Close]

BLAST of Sed0026438 vs. TAIR 10
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.6e-12
Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 0


Query: 1   MTLAMISSAVLFAATCIAAIASAASAADCSAVVMEMLPCVDYITIGGTAATPSDTCCTAT 60
           + L  +SS  +  A+   A A A S  DCS +++ M  C+ +++ GGT A P  TCC+  
Sbjct: 16  IVLLSLSSVSVLGASHHHATAPAPS-VDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGL 75

Query: 61  EDLLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSP-LPDCGSAFHFTTDFNIL 120
           + +LK + +C+CE  K S   G+  N+T+A +LPAAC + +P +  CG            
Sbjct: 76  KTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCG------------ 135

Query: 121 LPLPPGMEPALVPS-SKARPPVPGAAAPTPFPGS 151
           L + P   P L P  + A P   G  AP P  G+
Sbjct: 136 LSVAPSTAPGLAPGVAAAGPETAGFLAPNPSSGN 156

[Close]

BLAST of Sed0026438 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 6.1e-12
Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 0


Query: 3   LAMISSAVLFAATCIAAIASAASAADCSAVVMEMLPCVDYITIGGTAATPSDTCCTATED 62
           +A  +  ++F+   + +   A +A DCS++++ M  C+ ++T G T   P  TCC+  + 
Sbjct: 1   MAYATILMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKT 60

Query: 63  LLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSPLPDCGSAFHFTTDFNILLPL 122
           +++T  EC+CE  K SG  GL  +L++A SLP+ C +++P P        + D       
Sbjct: 61  VVRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAP-PSARCGLSVSGD------- 120

Query: 123 PPGMEPALVPSSKARPPVPGAAAPTPFPGSRP 153
           PP   P L P++ A  P   + A    P S P
Sbjct: 121 PPATAPGLSPTAGAGAPALSSGANAATPVSSP 144

[Close]

BLAST of Sed0026438 vs. TAIR 10
Match: AT2G13820.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11
Identity = 33/100 (33.00%), Postives = 61/100 (61.00%), Query Frame = 0


Query: 3   LAMISSAVLFAATCIAAIASAASAADCSAVVMEMLPCVDYITIGGTAATPSDTCCTATED 62
           +A  +  ++F+   + +   A +A DCS++++ M  C+ ++T G T   P  TCC+  + 
Sbjct: 1   MAYATILMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKT 60

Query: 63  LLKTNGECVCEELKQSG--GLQFNLTRAISLPAACGISSP 101
           +++T  EC+CE  K SG  GL  +L++A SLP+ C +++P
Sbjct: 61  VVRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAP 100

The following BLAST results are available for this feature:

BLAST of Sed0026438 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875880.1	2.5e-28	36.05	extensin-like [Benincasa hispida]	[more]
KAA0067412.1	1.3e-27	40.66	SH3 domain-containing protein C23A1.17-like [Cucumis melo var. makuwa] >TYK26549...	[more]
XP_022993468.1	1.8e-26	40.65	non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima]	[more]
XP_022939816.1	2.0e-25	39.84	non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata] ...	[more]
XP_008460480.1	3.4e-25	39.49	PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo]	[more]

BLAST of Sed0026438 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FY78	1.3e-11	34.13	Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3...	[more]
Q8VYI9	6.5e-11	33.77	Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3...	[more]
Q9ZQI8	8.5e-11	30.26	Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE70	6.1e-09	32.05	Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=37...	[more]
Q2PE60	7.7e-04	25.23	Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Sed0026438 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DSV8	6.1e-28	40.66	SH3 domain-containing protein C23A1.17-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1K2B1	8.8e-27	40.65	non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima O...	[more]
A0A6J1FGX0	9.7e-26	39.84	non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita moschata...	[more]
A0A1S3CC53	1.7e-25	39.49	SH3 domain-containing protein C23A1.17-like OS=Cucumis melo OX=3656 GN=LOC103499...	[more]
A0A0A0KN80	2.6e-23	45.05	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G396010 PE=4 SV...	[more]

BLAST of Sed0026438 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09370.2	1.9e-13	40.79	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G09370.1	9.3e-13	34.13	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G64080.1	4.6e-12	33.77	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	6.1e-12	30.26	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.2	1.3e-11	33.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 29..104 e-value: 2.9E-4 score: 30.2
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 17..101 e-value: 2.3E-12 score: 46.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 26..104 e-value: 2.9E-12 score: 48.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 27..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..208
None	No IPR available	PANTHER	PTHR33044:SF189	LIPID TRANSFER PROTEIN	coord: 6..211
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 36..97 e-value: 3.81426E-12 score: 57.8219
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 6..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026438.1	Sed0026438.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane