Sed0026438 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATTGGCGATGATTTCGAGCGCGGTTCTGTTCGCGGCGACCTGCATTGCAGCGATTGCGAGCGCAGCGTCGGCGGCGGATTGCTCGGCGGTGGTGATGGAGATGCTGCCGTGCGTGGATTACATCACGATCGGAGGCACGGCGGCGACGCCCTCCGACACGTGCTGCACGGCGACGGAAGATCTGTTGAAGACGAACGGCGAATGTGTGTGCGAAGAGTTGAAGCAGAGCGGCGGGCTTCAATTCAACCTTACCAGAGCGATTAGCCTTCCGGCAGCCTGTGGAATTTCTAGTCCTCTTCCTGATTGCGGCAGTGCGTTTCATTTTACTACCGATTTCAACATCCTTCGTTCCTAAGTTTCCAATCCAGATTCTGAATTTTTTTTTTTCTTTGGCAGTTCCTCTTCCGCCTGGTATGGAACCTGCTCTAGTTCCGAGTTCTAAAGCGCGGCCGCCAGTTCCCGGTGCTGCAGCGCCGACGCCATTTCCAGGCTCTAGACCGCCAATGCCATTTCCTGGATCTAAAGCGCCAACGCCATTTCCTGGTTCTAGAGCCCCAACGCCATTTCCAGCTGGTTCTAAAGCGCCAACGTCATTTCCAGGATCTAAAGCGCCAACTCCATTTCCAGCTGGTTCTAAAGCTCCAACTCCATTTCCAGTTTCTAAAGCTCCAACGCCATTTCCAGGTTCTAGAGCCCCAACGCCATTTCCAGGATCTAGAGCGCCAACGCAAGCTCCGTTTTCGAGGGCTCCTGGTCCAAGTAGAAAAATGCTCGCACCTGCTCCCAGTATGGTCCCCACGCTTTCTCCAGGTACCATTCCTTGAAATAAAAACTTTATTTAATCCCTTGCTTCTATTTCATACTATTTTATATTTTATATTTAATTTTTAATTTTTAAAATTTAAATCTACCATAATTATTTTACTATGTAATTTTTTTTTTCTTAAATTTTTACATTTTACTTATATATATAAATCAATTTCTAAATTTTATACTTTAACCTTTAAATTTTAAGATGTTAAGCTTAAAAAAATTGTTTTCAATTCAATTTTCATTTAAGTTTTAAGTTTCAAGATTTTATTTTTTAATCTCTAATTTTAGAATAGTTTCAAGATTTTCTAATAAAATTTTGTTGATTAAAAACGGACTGTAATTAAATTATTATTATTTTTAGTAAATTTGCATCATTAATAAATAAATTTTAAAATCTACATCATAGAATTTTAAAGTAGTGAATATATAGTTTATGCAAATAACTAAAAGTGAACAGTCGTAATAGAGCATAGTGATAAAAATATAACATTTAGAGTACTACAAATTAAATCAAAGCTAAACTCAAAACTTGAGATTAAAAATATAACATTTTGAAATTAAAAAATAAATGAAAACTAAAATTGAAAGTTAATAAAAACCATACTCTCTAATTTTTTTTTTATAATACTTTTATTAAATTACTCCTATTCATATATATCCTTTTTTGAGATCATAATTAGGATAATTTAAGGGGCCAAAATTCGATCCGCAAGAAAAAAAGACTCAAAAATCATTTTTTAATATAAAGTTACCTGTTCCTGTCAAATAAAAATAAATTTATTTACGTAATCACATTTGTTGTTCGATATATGTAATATAATATATTTATTTTTTAAAAAATATTAAGAGCCATTCACATTTTTTTTTCCTGTAGATTTCAAGTATGAAATTTATTATAAAATTAATAATATGAATAATATTTTTTAATGAAAGAATAAAATACAAATTTCTAAAGGCTAAATTATATATAGAATAAAAACATAGAGTTGATTTCAAATATGTTTGTTTTGTTTGATTTAATTACATGAACTAAGCAATAGCTCTGATATCATGCGTAATGTAATGGTTGTAGTTGACCCACTAGCTCCTGCAACACTAACACCAGAAATGCCCCCAAGCAACGCACCATCGTCGCCGCCATCACCTTTAGGCCCATCGAGTGACGATGACTTACCGGAGTTGGCACCGTCACCGTCACAGTCAAATGCCCCGTTCTTCGCTATTTCCTATAACCTGATCGTGCCACTTCTGCTCACCCTTCTCGCTTCATTTCAACCATTGTGA ATGACATTGGCGATGATTTCGAGCGCGGTTCTGTTCGCGGCGACCTGCATTGCAGCGATTGCGAGCGCAGCGTCGGCGGCGGATTGCTCGGCGGTGGTGATGGAGATGCTGCCGTGCGTGGATTACATCACGATCGGAGGCACGGCGGCGACGCCCTCCGACACGTGCTGCACGGCGACGGAAGATCTGTTGAAGACGAACGGCGAATGTGTGTGCGAAGAGTTGAAGCAGAGCGGCGGGCTTCAATTCAACCTTACCAGAGCGATTAGCCTTCCGGCAGCCTGTGGAATTTCTAGTCCTCTTCCTGATTGCGGCAGTGCGTTTCATTTTACTACCGATTTCAACATCCTTCTTCCTCTTCCGCCTGGTATGGAACCTGCTCTAGTTCCGAGTTCTAAAGCGCGGCCGCCAGTTCCCGGTGCTGCAGCGCCGACGCCATTTCCAGGCTCTAGACCGCCAATGCCATTTCCTGGATCTAAAGCGCCAACGCCATTTCCTGTTGACCCACTAGCTCCTGCAACACTAACACCAGAAATGCCCCCAAGCAACGCACCATCGTCGCCGCCATCACCTTTAGGCCCATCGAGTGACGATGACTTACCGGAGTTGGCACCGTCACCGTCACAGTCAAATGCCCCGTTCTTCGCTATTTCCTATAACCTGATCGTGCCACTTCTGCTCACCCTTCTCGCTTCATTTCAACCATTGTGA ATGACATTGGCGATGATTTCGAGCGCGGTTCTGTTCGCGGCGACCTGCATTGCAGCGATTGCGAGCGCAGCGTCGGCGGCGGATTGCTCGGCGGTGGTGATGGAGATGCTGCCGTGCGTGGATTACATCACGATCGGAGGCACGGCGGCGACGCCCTCCGACACGTGCTGCACGGCGACGGAAGATCTGTTGAAGACGAACGGCGAATGTGTGTGCGAAGAGTTGAAGCAGAGCGGCGGGCTTCAATTCAACCTTACCAGAGCGATTAGCCTTCCGGCAGCCTGTGGAATTTCTAGTCCTCTTCCTGATTGCGGCAGTGCGTTTCATTTTACTACCGATTTCAACATCCTTCTTCCTCTTCCGCCTGGTATGGAACCTGCTCTAGTTCCGAGTTCTAAAGCGCGGCCGCCAGTTCCCGGTGCTGCAGCGCCGACGCCATTTCCAGGCTCTAGACCGCCAATGCCATTTCCTGGATCTAAAGCGCCAACGCCATTTCCTGTTGACCCACTAGCTCCTGCAACACTAACACCAGAAATGCCCCCAAGCAACGCACCATCGTCGCCGCCATCACCTTTAGGCCCATCGAGTGACGATGACTTACCGGAGTTGGCACCGTCACCGTCACAGTCAAATGCCCCGTTCTTCGCTATTTCCTATAACCTGATCGTGCCACTTCTGCTCACCCTTCTCGCTTCATTTCAACCATTGTGA MTLAMISSAVLFAATCIAAIASAASAADCSAVVMEMLPCVDYITIGGTAATPSDTCCTATEDLLKTNGECVCEELKQSGGLQFNLTRAISLPAACGISSPLPDCGSAFHFTTDFNILLPLPPGMEPALVPSSKARPPVPGAAAPTPFPGSRPPMPFPGSKAPTPFPVDPLAPATLTPEMPPSNAPSSPPSPLGPSSDDDLPELAPSPSQSNAPFFAISYNLIVPLLLTLLASFQPL Homology
BLAST of Sed0026438 vs. NCBI nr
Match: XP_038875880.1 (extensin-like [Benincasa hispida]) HSP 1 Score: 136.7 bits (343), Expect = 2.5e-28 Identity = 124/344 (36.05%), Postives = 158/344 (45.93%), Query Frame = 0
BLAST of Sed0026438 vs. NCBI nr
Match: KAA0067412.1 (SH3 domain-containing protein C23A1.17-like [Cucumis melo var. makuwa] >TYK26549.1 SH3 domain-containing protein C23A1.17-like [Cucumis melo var. makuwa]) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-27 Identity = 111/273 (40.66%), Postives = 141/273 (51.65%), Query Frame = 0
BLAST of Sed0026438 vs. NCBI nr
Match: XP_022993468.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima]) HSP 1 Score: 130.6 bits (327), Expect = 1.8e-26 Identity = 100/246 (40.65%), Postives = 133/246 (54.07%), Query Frame = 0
BLAST of Sed0026438 vs. NCBI nr
Match: XP_022939816.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata] >KAG7016532.1 Non-specific lipid-transfer protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 127.1 bits (318), Expect = 2.0e-25 Identity = 98/246 (39.84%), Postives = 132/246 (53.66%), Query Frame = 0
BLAST of Sed0026438 vs. NCBI nr
Match: XP_008460480.1 (PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo]) HSP 1 Score: 126.3 bits (316), Expect = 3.4e-25 Identity = 109/276 (39.49%), Postives = 139/276 (50.36%), Query Frame = 0
BLAST of Sed0026438 vs. ExPASy Swiss-Prot
Match: Q9FY78 (Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3702 GN=LTPG29 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11 Identity = 43/126 (34.13%), Postives = 75/126 (59.52%), Query Frame = 0
BLAST of Sed0026438 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 6.5e-11 Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 0
BLAST of Sed0026438 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 8.5e-11 Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 0
BLAST of Sed0026438 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.1e-09 Identity = 50/156 (32.05%), Postives = 74/156 (47.44%), Query Frame = 0
BLAST of Sed0026438 vs. ExPASy Swiss-Prot
Match: Q2PE60 (Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3702 GN=LTPG23 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 7.7e-04 Identity = 56/222 (25.23%), Postives = 102/222 (45.95%), Query Frame = 0
BLAST of Sed0026438 vs. ExPASy TrEMBL
Match: A0A5D3DSV8 (SH3 domain-containing protein C23A1.17-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001470 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 6.1e-28 Identity = 111/273 (40.66%), Postives = 141/273 (51.65%), Query Frame = 0
BLAST of Sed0026438 vs. ExPASy TrEMBL
Match: A0A6J1K2B1 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima OX=3661 GN=LOC111489469 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 8.8e-27 Identity = 100/246 (40.65%), Postives = 133/246 (54.07%), Query Frame = 0
BLAST of Sed0026438 vs. ExPASy TrEMBL
Match: A0A6J1FGX0 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita moschata OX=3662 GN=LOC111445576 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 9.7e-26 Identity = 98/246 (39.84%), Postives = 132/246 (53.66%), Query Frame = 0
BLAST of Sed0026438 vs. ExPASy TrEMBL
Match: A0A1S3CC53 (SH3 domain-containing protein C23A1.17-like OS=Cucumis melo OX=3656 GN=LOC103499284 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.7e-25 Identity = 109/276 (39.49%), Postives = 139/276 (50.36%), Query Frame = 0
BLAST of Sed0026438 vs. ExPASy TrEMBL
Match: A0A0A0KN80 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G396010 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 2.6e-23 Identity = 100/222 (45.05%), Postives = 124/222 (55.86%), Query Frame = 0
BLAST of Sed0026438 vs. TAIR 10
Match: AT5G09370.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 73.9 bits (180), Expect = 1.9e-13 Identity = 31/76 (40.79%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of Sed0026438 vs. TAIR 10
Match: AT5G09370.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 71.6 bits (174), Expect = 9.3e-13 Identity = 43/126 (34.13%), Postives = 75/126 (59.52%), Query Frame = 0
BLAST of Sed0026438 vs. TAIR 10
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 4.6e-12 Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 0
BLAST of Sed0026438 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 68.9 bits (167), Expect = 6.1e-12 Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 0
BLAST of Sed0026438 vs. TAIR 10
Match: AT2G13820.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11 Identity = 33/100 (33.00%), Postives = 61/100 (61.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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