Sed0025700 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGAATGAAGTCTGTTGGGCAAGTTATGATGTTCTTGCTGGTGGGTTTGCTGATGAGTCAGGCACAGCCACAAAACTGCCTAACTCAGCTCAGCAACATAAATACTTGTGCACCTTTTGTAGTTCCTGGTGCCAGTAACCCTAGCCCAGAATGCTGTGCAGCCCTTGGAGCTGTGCAACCAGACTGCCTTTGCAGCACCCTCAGAGCTGCCTCCACTCTCCCTTCTGTTTGCCACCTCCCTCCTCTCTCGTGTGGTCCGTTTTCTTTCTTTTTCGATGAAATATCTTGAATCGGTTACTTTGCATTGCATTATGTTATTCTTCTTCTGCATGTAGATGTAGATAAATTAGTGTCAGTGAATCACCTAATTTTGTGTGTTGTTGTCTCGTTTTGTATTTTTCTTCTGCTTGTAGACGTTGCTAAAACAACGTTAGAGAACTACGTAATTGTGTGTTTTTTGCTACTTTTCTTCTGCCTGTAGATGTAGCCGAAACAACGTTAGTGAACAACACAATTTTGTGTGTTTTTGTGTCATTCAATATTTTCTAGAGTGGCTAAAACAAAATTAGTGTAACACGCAATTTTGTGTGTTTTTGTTTCATTATGTATTTTCCTTCTGCTTGTAGACGTAGCTAAAACACCGTTAATGAACCCATGATTCTATGTTTTAGTCTCATTCTTTTATTATTTGATTGTCGTTTATGTTTTTTGTTACAATGGTTTTGAATTAAGGTTGGTTTTCTTTTTTTTGCTTTATTTCAGGTACAACTACAAACTAGAAGAGAAAGGTGATGGGGATTGACAAGAAATGAATAATGGTGGAGGATTATCAGTTGGTTTTGTTGTTTTCTTTCCTGTTTTTTGGTGTCCTTTGATCTGAAGTCAATGTTCTCTCTAATGTCAGGTTACATTGA ATGGCAGGAATGAAGTCTGTTGGGCAAGTTATGATGTTCTTGCTGGTGGGTTTGCTGATGAGTCAGGCACAGCCACAAAACTGCCTAACTCAGCTCAGCAACATAAATACTTGTGCACCTTTTGTAGTTCCTGGTGCCAGTAACCCTAGCCCAGAATGCTGTGCAGCCCTTGGAGCTGTGCAACCAGACTGCCTTTGCAGCACCCTCAGAGCTGCCTCCACTCTCCCTTCTGTTTGCCACCTCCCTCCTCTCTCGTGTGTCAATGTTCTCTCTAATGTCAGGTTACATTGA ATGGCAGGAATGAAGTCTGTTGGGCAAGTTATGATGTTCTTGCTGGTGGGTTTGCTGATGAGTCAGGCACAGCCACAAAACTGCCTAACTCAGCTCAGCAACATAAATACTTGTGCACCTTTTGTAGTTCCTGGTGCCAGTAACCCTAGCCCAGAATGCTGTGCAGCCCTTGGAGCTGTGCAACCAGACTGCCTTTGCAGCACCCTCAGAGCTGCCTCCACTCTCCCTTCTGTTTGCCACCTCCCTCCTCTCTCGTGTGTCAATGTTCTCTCTAATGTCAGGTTACATTGA MAGMKSVGQVMMFLLVGLLMSQAQPQNCLTQLSNINTCAPFVVPGASNPSPECCAALGAVQPDCLCSTLRAASTLPSVCHLPPLSCVNVLSNVRLH Homology
BLAST of Sed0025700 vs. NCBI nr
Match: XP_038892584.1 (protein MEN-8-like [Benincasa hispida]) HSP 1 Score: 129.8 bits (325), Expect = 1.3e-26 Identity = 66/90 (73.33%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of Sed0025700 vs. NCBI nr
Match: XP_022968421.1 (stamen-specific protein FIL1 [Cucurbita maxima] >XP_023542033.1 stamen-specific protein FIL1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25 Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Sed0025700 vs. NCBI nr
Match: KAG6574162.1 (Protein MEN-8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25 Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Sed0025700 vs. NCBI nr
Match: XP_022945428.1 (stamen-specific protein FIL1 [Cucurbita moschata]) HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25 Identity = 67/90 (74.44%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of Sed0025700 vs. NCBI nr
Match: KAG7013216.1 (Stamen-specific protein FIL1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25 Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Sed0025700 vs. ExPASy Swiss-Prot
Match: O24356 (Protein MEN-8 OS=Silene latifolia OX=37657 GN=MEN-8 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 7.2e-17 Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 0
BLAST of Sed0025700 vs. ExPASy Swiss-Prot
Match: Q38737 (Stamen-specific protein FIL1 OS=Antirrhinum majus OX=4151 GN=FIL1 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 8.0e-16 Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = 0
BLAST of Sed0025700 vs. ExPASy Swiss-Prot
Match: Q43495 (Protein 108 OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 7.5e-14 Identity = 38/84 (45.24%), Postives = 58/84 (69.05%), Query Frame = 0
BLAST of Sed0025700 vs. ExPASy Swiss-Prot
Match: Q00762 (Tapetum-specific protein A9 OS=Arabidopsis thaliana OX=3702 GN=A9 PE=2 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 1.4e-12 Identity = 41/90 (45.56%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of Sed0025700 vs. ExPASy Swiss-Prot
Match: Q05772 (Tapetum-specific protein A9 OS=Brassica napus OX=3708 GN=A9 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.8e-12 Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 0
BLAST of Sed0025700 vs. ExPASy TrEMBL
Match: A0A6J1HUT5 (stamen-specific protein FIL1 OS=Cucurbita maxima OX=3661 GN=LOC111467668 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 6.8e-26 Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Sed0025700 vs. ExPASy TrEMBL
Match: A0A6J1G0V2 (stamen-specific protein FIL1 OS=Cucurbita moschata OX=3662 GN=LOC111449664 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 6.8e-26 Identity = 67/90 (74.44%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of Sed0025700 vs. ExPASy TrEMBL
Match: A0A5D3DFQ3 (Protein MEN-8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00440 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.2e-25 Identity = 62/90 (68.89%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of Sed0025700 vs. ExPASy TrEMBL
Match: A0A1S3AY46 (protein MEN-8 OS=Cucumis melo OX=3656 GN=LOC103484052 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.2e-25 Identity = 62/90 (68.89%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of Sed0025700 vs. ExPASy TrEMBL
Match: A0A0A0LBB5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180390 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 4.4e-25 Identity = 62/90 (68.89%), Postives = 73/90 (81.11%), Query Frame = 0
BLAST of Sed0025700 vs. TAIR 10
Match: AT5G62080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 80.9 bits (198), Expect = 6.3e-16 Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Sed0025700 vs. TAIR 10
Match: AT5G52160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 74.3 bits (181), Expect = 5.9e-14 Identity = 44/88 (50.00%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Sed0025700 vs. TAIR 10
Match: AT5G07230.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 73.6 bits (179), Expect = 1.0e-13 Identity = 41/90 (45.56%), Postives = 54/90 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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