Sed0025109 (gene) Chayote v1

Overview
NameSed0025109
Typegene
OrganismSechium edule (Chayote v1)
Descriptionvacuolar protein sorting-associated protein 2.3
LocationLG06: 22374728 .. 22382844 (-)
RNA-Seq ExpressionSed0025109
SyntenySed0025109
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTTCTTCTTTCCCATCCCTTCACCCAAACCCTAGCCTCCACTTCAACCTGCCGTCGCTGCTGTCTCAGACCCGACCACCGCCTGCACCGCTGCCTATCTCCGCGCGCAACGCCCCGCGACCGCCCTGCTTCGCCTCACGCCTGCGCACAGCGCCGTTGACGGCGCCTTGCTCAGCCGCGCACGACGCCACGCGACCTCAGCCGCAGACCCTCACCGATGACGTCTTTCACCCGCGCGCAGCCACACTCCGCGAGCAGCAGACCCGACCAGTCGCACGCCCCTGTCGCAGCCCCAATGCCCAACCTCGATGCAGTGCCAAACCCCAGTCGTGCTCACCCCTTTCCAGCAGCCTCACGCACAACCGTTTGATGGGTGGTTTCGATTTCAGACCTGAGGTTGTTTGCTAAGAGGGTGTTGCAGCTCTTGTGGATTCGTGTTTCGCCAAACATTGGACATCCGTGTTCACTTCCAAATGGTTGGACAAGTCATCTTTCAGGTTGGGTGGATCGTTGTGTTGATTTTTTGGGTTGGGTTTGTTGGATCTATCTTGTGATGATTGGTTTGGTTTAAGTTATGGTTCTAATTGCCATGGCTGTTGGATTTTGGTCTTAGTGTTGGAATGGTTAATCTAAGTGTTTCAGTTTGGTTTGATTTGATTTCGAAGAATGGTTCTTCTTGGTTTCAAGTGTGTGGTTGAGATTTTGTTGGTTCTTCGTACCTTTGTCAGATAATGAGATAGCTTCGATCACCTTCGGGTTTTAGGTAATTTCTTTCTAACCTCCAAGATTAGTATGTTCGTTTTGCTATCGTGTGATGCATTTTAATTGTTTTAATGTTGGTGGATAGGTGGTTCTGTGGTTTGGGTCTTGCCATTGGAGATTGTATTTTTTTTTTTTTTTGAAACCACCATCGGAGATTGTTGTTTGTTTTGTATTGTTGAAAAAGCTGGTAAGGACTATCTCTACTCGGGTTGTGTGGACCCTGCACAAGGCGAAACTCACTATGCTTCTGATATGTCATGAGTCCCGGGGTGCTATGGTGTATGTCTTTTCTATCATTATATTTCTTGTGAACATGCTAGGATTATGAGGTTCTAGTATGTTTTTACCTCTGTTGCTTGCTCTATGTTTCTCTTGGTATGTGTGTGAGCTGGTGATGACGTGTGTTAGTATGCAGCTAGTCCTGATCATGTATTGAGTAATATCCTGTTAGGATGACTATAAGAATATTGAGCATGTTTAGTGATCTGTTAGCATTTGACTAACTCCCTCTGATTTAGTTGTCTCCTAAAAAACAAGTTCCAGAACCTATTCCCTTTCCACAAATAGATATTCATATACCTTTGCTATTAGCAATGTTATTTAATTTTGGAAAAGATATACTAAGTGTCTGAGAAGGAGAGAGAAACAGAGATCTTGAAGCAAGGAGAAATATGGACTCTTTCTAGTGCTACTCTCATTTTTAATTCCTTTTACTACTTTTCTTCAATAATGTGTAGCTTTATCAGAGTTTCATTTTATTTTCATATTGTAACCAACCATTAGTTTTACATTCTTAGTTCGTTTTGTGGATGCACTAAGCGGTCACATCTTTTTGCCTCTTTTTCTTCTCTCTCTTCTTACAGGTATAGAGGAGGAAATTGGAGCATTGCAATTAGAAGTACGTGAAGAGCTTGTATAGATGATTTTACTTACTATCATATCAGGAAATAAAGCTTGTTGCAGAGATAAAGAGAACTTCCAAAACAGGAAATGAGGTATATTTCATAGTCTGGACCAGCTTGTATCAGTTTTAGCCTTAGGAATGCTTGTTTCTTTTTGAAAAATTCTACTGTGGTTTCTTCAAGTATTGATTTTTTTAGCATCAGTTATTCATTTCTTCAGACAGCAACAAAGATTCTTGCTTGGCAGCTAATCAGGCTCAGACAGCAAATAGCAAACTTACAAGGAAGTCTAGCTCAAATGAGAGGCATTGCAACTCATACACAGGTGAAGTCCAGTGCCTAATTCATTTATTTCTTACTTGGTTCAGTTTTGTGTGCATTTTTAAATCAGATGTATAGTTTTCTCGTCTACGTATATGAGATCTATAGACATTTTCTCCCAAGTGTTCGTATATGTTGTATTATTAGTGGCACCTAACCACTTTTTGCAGGCAATGCATGCTCAGACATCTGTTGCTGCTGGCTTGAAGAGTGCCGGGAAAGCAATGTCAGCTATGAATAAGGTAAAGAAATAAATTTTGGATTTTAATCAAATCTTACATATACTTGATATGTGTGTTTGACATGCAGGGTAGTAGCCCTGTTTTGAAAGCATAATCACCTTAAGCCCAGAGCCAATAAAAGGGTGTTGTTTGGGTGAAGCGAGTCTAACATAAATAAGTTGAAAACAATTACATATAGCTACTTTTATTTGTAACATTAACAAGTTAAACAGCCTTAATTTGTTTAACTTATTTATGTTAGACGGCCTTAATTTGTAACAATTATACAAATAAGTTGAAAACAATGTGTTTGGCTGATTAACTCTCCAGGAAAGTTTCTATTAGTAACAATAAGACTATTTAAGGCTGAAAGAGAAAACAAGTAGCAGGGTATATTTTCAGGTTTTTATTTGTATATTAAAGAAAAAGAAAACAGAAAGGTCAAATAAGAAGATGCACTCCAGTGGAAATGGAAAAGCGCAAAAGAAGATTAAAAAAATCACGATGAATTTTTTTTTAACCAAAATGAAAATTTGAGGGAGAAATATTGTATAGCTTAGATGAAGATGCATTTTTCCTTTTGGAGGGATTTAAGTTGAAACTGATTAAAATCAGACGAAGCAGGAGCAGGCAAGCTGCCGAGATTTCTTCTAGCCACTTTTATTTAACATTTTTTTCATATCCATTAGTATTTGGTCTAACTTGCATGCTCTCGACTCGATTATTCTCACGAGACATACCGTCTGACCTTACAATATTTAGATGTCTTGGAAACCCGTAAGAAATTATTTCTATGGATTGACCCCATCACCTCTTAGTTAGTTATGACACTTGTCTCCAAGGGGTGTAGCGATGGTCAAAGGCTTGAGTTTTGAAAGTATGCTCCCCTCAAGGTCCCAGGTTTGAGACTCACTTGTGATATAAATTTGTAGACACCTCTCATGTCTCCATTTCTTCAATGTCTCTTGGTGACTAACTTCTCGGTTTCTAACGGGCGTGGTTATTCCAGGTATAGTGGAGCAAAGTTCCAATTTCTCGGTTTCTAAAATGAAAGTTAGTTATGACACTTGATTTCTTTAACATCTAAAACAGAGGGAGGAGACATTTAGCCGCTTGTATGCCAAATAATCAAAATATCTTAAATTTGTAAACTAATAGTGGTTAGGTTTGGGCTTTTAGATTTAATTGCATCTCTTGACCAATTATGTTGCCATGAAAAATGGTGACCGAGAAGTGACTAAAGAATGTGCCTCAATGAAGATGCACTTCATGGTTGAGATGGAGGCAAGTCCCTTCGCACCCGTTACAAACATTTAGACTATGGACTTTTTCTAGTGGAATTTCTTTGTTTTAATCTTTTTTTTGGAGATATGGCTTCGGTCCAAAGCAAAGCCATGCGGATTACAACAAATTCCTTGGTCCGCATTCATCAAACGAGAATCATGAATACAAAGAAATTTGAAGCATGGGCACCAAAGGTGGACGTGGACCTTGAACTTTAAGGGTTTCCAAATATAGCTTTCTAATTTGCTTGTCCCAAAAATCTTGATTTTCTGAGCCAACACCTCTAAATGAAAAGTTTGGCCTACCCTCTCCTACTAAAATTTGGCCTGTTGTTTTAGGTGGATTGTAAAAAATGAAACTATCTAACATGTGAATTCTGAAAACTCCAAAAGATATTGAACTTTGAGCAGCTTGGTCCGCTGTCCGAAGATGATGAGAAGATGACTCAGAAAACAGGTTGCTTTAGCCTAGCCCTAGGTTGTGCTTATTCTTTATATTCACCAACTAACGAAAAATTAACATTTGAAGATGTCTTTGAGTTACATTAGCGTTATTAAGGTTTTCTAATTATCAATCCATGCCTCCATTTCTTTCGATAATGATAATTCATTACTATGAAGAGATTGTCTAATGGTGAGGCTGCCTTTGAGTTAGAACAACTTGTGAAGGCCAATTTTTCTTTTCTTGGATTGAATTATTTTGTACTATGAAGTCTGAAGTATTGTGCCTGATGTGGGTTTCGGTAAAAAGAATAAAAAAAGTGCCTATTATGATACGCGCCCGTGTTCTGTGAACAATTGATTATTTAAAATCTTGTAAATAATCATTACCATGTTCATTTGCAGCAAATGGATCCCGTGAAGCTAGCAAAGGTCATTAGAGAATTTCAGAAGCAGTCTGCACAGATGGATATGACTGTAAGATCTTGCTCTTATTAAATTTATTTTTCCACTCAATTTATAGAAAGAAAATCATTTGAATTTGCAAGCTTTGTTTATTTTGTGCTTTCTACATAGCAGAGTGGTCTGCGACATCTTGTCCTCCCTGTTTGTATTATACCCTTTTCTTTTGGTTGAAATAAGCATGACATGATGTTACTGCTGTATTCGGCACATTTCGAGTATATAAATCTCCGAAATGATTTAATACTAGCAGTAGCAACTAGCAAGAAATTCTGACTTATTTGAAGGATATAAGTTTGGACTCATAGTCAGTTCACAATAAACTATTTTGTACTCTAATGCAATTTGAACCCATTTTTATCAAATTTTTGAATTGTTTTGATTAGCCTGCTCTCTTCTTTCCTAATATTATCCCAGAATTTATCCTTACCGTGCATAAGGCACCGCCACGTCTCGGTTCAGGAATTTTAACCCGATTCCCTTTCGAAGCTCGCGCTATAGCGCTATCAGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTTTTCGGCCTTCAAAGTTCTCATTTTAATATTTGCTACTACCACCAAGATCTGCAGCGACGGCCGCTCCACCCAGGCTCACGTCCAAGGTTTTGCAGTGACTGCTGCGCCCTCCTACTCATTGGGGCCTGGTACTTGCCCCGACGGCCGGGTATAGATCGCGCGCTTCAACGCTATCCATTTTTGGGGCTAGTTGATATGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCAACTTCCATGACCACTGTCCTGCGGTCTTAATCGACCAACACCTTTCGTGGGATCTAGGTTAGCGCGCAGTTAGGCACCGTAACTCAATTCCGTGGTGCGGCTCAACAAAGTAGCCTGTAAAGACTCGACCCGAATGGGGTCCTAAACTAGGCCTTTACCTCAATGCATGGTTGAAAAACTTAGAAAACATCATGCAGGGTTGTATGCCAGATTCTGAATAAAACTAAAAACGGTAAACATTCATTCAAAACAAACATAAAATGTTCTGGAACCTGTCCCTGTTTCCAAGTACCTGTTCTAAGCTAAATACAATTTAAAACGTACTCTGATTAGAGATTTAATTCAAACATTCGAAATCCAAAACAGTTTACATCAGTGTCAGAATCTAGAAAACAACCAGAAAACAACCTAAGGCTCCGTGCCCAACTACATGCATTCAGAGGACTTTTAAAAACATAAAAACATAAACAAAAGACTCAGAGTTTAATCAGCTGGTTTCCATGATCAGCAGCTCCTCCTTCAGCCATCCTGTCTCGCACCATGGTGTAAGGGACCGACCCGAATGGAGCACTAAATGGGCCCTTACCCCAATGCATGCATTCAAAGTAAAGGACATTTAAACAGACATGATTTTGGATTCCAATTAAAACAAAACATTAAAAATAACCCCTTTAAAAACTAGACAATTTCCCTGGAACCTGTCCCTGTTTCCAAGCACCTGTTCCAAGATAAATACATTTCCAAAGTATACTCCGATCAGAGATTTCTTAAAATCATTCAAAACATGTCTAAATACAATAATGTTGGAATCCACAAAATATTCAGAAAACATCCTAGGGCTCCATGCCCGGCTACATGCATTCAGGGGAAAATAAAACATAAAGAGTCATAATACAAAAATCAGAGTTGGAAGACTGGGCCCCATGATCACGGCTCCTCCTTCACCATCCTGTCTCATAACTTGGTTACTGTGGAAAAACCACAATAAGGGTGAGTAACGAATTACTCAGTAAGAATCCCCAACCGGGGTACAATACGATATACATGGTCATCTCGATGAGCGTATGCAAGCTATGAATATAAACACAGAATAGAGCACATAGCTTAGCCCACACTTGGGCCTCATATGCCAATTTAAGGTCTTAGTCCGGAATAATATCACCACACAGTCCAATATATAAGTCGCCCTATACGAGAAATAAGTCCCGCCTCGGCTGCCTCTCATCTGTCGACGAAAGGTACAGCGGCTCACAATCCCGAGGAGCTCTCGATCGGTATTTGTAATGAGCGTAAGCATGCACCGCGTGCTACTGCGCAGAACTATGAGGGGTGCCGGCCCAGAGGCAAGTCGCCCATGTCGATCCACCACGCCTAACTAAATCTTTGGATCGGTGTCACTGACATAGGGGTGTGAGACCTGGACACGTAAACTATGTCAGCCTGAACCACCGCACCTAGGGCCAAGGAACGGTCGTGGTAGGCTTACACCAGGAAGCCGTCCTTGCCTTAACGGGTGGCAATCAAGGGCTACTGCCAAACATGCTGAGGACATGCCGGCTGCCGGGGACGAGGCAATGCCAAGTCATCATCTCGACCGTTGGGGCATTTAACAGTCTGCCACCCTCACCCAAGATTGCAGGGCCTACCGCTTGGGTTAGCTAATCCCTCACGGGGTCCAGGGACGGAATGACTTGCTCGACGTCCCTGCCATGGATGCAAGGTACTTTATGCATCAGACTCGGATGATGCTATCTACCTGCAATTCTAACCTGCCCTAGCAAACAGCAAACAATTTCATAAAATCCAATACGTGCTCAATAAGAATACAACGAGCCTAGCATGATACTACGAAGCAAGGAACAGATACGAGCATGCTAGAAAGGAACAACCTAGCATGGATTAACATGAGAATTAGTCAGGAAAAACATGCTAATCGGGAATTCAGAATTGAGTACCTAGCTATACATGTCAATAAACACAAACAAGCAATCAATCAGCAATCACATATAATATCGCAGGGTCCACACAACTCCGGTAAGAAATCCTTACCTTGGTCGGGGACGATTTGACACGAAAACCTAGGTGGCGAACGAACCCGAACTAGCTATCGAGAACCTATCAATCACAACAAAAATCACACAATAGGCCTAAATATAATAAAATAAACAAGGCTCAGCTCGGGAGCAACTCACAAGGCGCGACAAACGCACGAACGAGCCGACAGCACCTAACAGGCAAAGAACTGGGTTGGTTGGCGCGCGCTAAGCGCGAGAATGGGCTGGCTGCCTTGTGAATGGCGCCAGAAAGCAGCTGAAGCGCATGCTGACGGTCAGGCGTTAGCGTGCGGCTCGGCTGGGCGCTGCGCAGCGCAGACGCAGATCTGGCGAGATGCGCGGCGTGACACGGCGATCGGGCTGCGACAATGAGCCAAGCTTCCGCTGAAATTTGGCGAGCTCAGCGTCTGGCGCGAACAGGCGAACAGCAAGCGCGGGTCGCGAACGAATTGGCGAATTGGGGCGAATTGGTTGGACGAATCACCTCGGCTAGCTGCACTGAACATCACACACACACTAATCACTTCGACTCGACCGGAAAACTCGAAATCGGAACAGGGGAGAGGGAAACGCGAAGGAGAAGAAGAGAAGGAGAAACTTACCAGCTGCTCACGATTTTGCTTCGGATTTGGGAGAGGAACTCGGTCGAATTGGAGCTGGAGAAAGAAGAAATCGCGAAGGAAAAGTGAGTCGGTCGGAGGAGAATTTCGCCAAGGAAGAAGAAGAAATGGGGAAGAAGCTCGGGCGATTTTGGCTTTTAAATCAACCGCACGAAGACAGGCTAATATACAAGGTGGCGCGTTTAAGATCACAAAAATGCCTGGTGGCTCGATTGGCAACGACACTCGTCTAG

mRNA sequence

CTTCTTTCTTCTTTCCCATCCCTTCACCCAAACCCTAGCCTCCACTTCAACCTGCCGTCGCTGCTGTCTCAGACCCGACCACCGCCTGCACCGCTGCCTATCTCCGCGCGCAACGCCCCGCGACCGCCCTGCTTCGCCTCACGCCTGCGCACAGCGCCGTTGACGGCGCCTTGCTCAGCCGCGCACGACGCCACGCGACCTCAGCCGCAGACCCTCACCGATGACGTCTTTCACCCGCGCGCAGCCACACTCCGCGAGCAGCAGACCCGACCAGTCGCACGCCCCTGTCGCAGCCCCAATGCCCAACCTCGATGCAGTGCCAAACCCCAGTCGTGCTCACCCCTTTCCAGCAGCCTCACGCACAACCGTTTGATGGGTGGTTTCGATTTCAGACCTGAGGTTGTTTGCTAAGAGGGTGTTGCAGCTCTTGTGGATTCGTGTTTCGCCAAACATTGGACATCCGTGTTCACTTCCAAATGGTTGGACAAGTCATCTTTCAGGTTGGGTGGATCGTTGTGTTGATTTTTTGGGTTGGGTTTGTTGGATCTATCTTGTGATGATTGGTTTGGTTTAAGTTATGGTTCTAATTGCCATGGCTGTTGGATTTTGGTCTTAGTGTTGGAATGGTTAATCTAAGTGTTTCAGTTTGGTTTGATTTGATTTCGAAGAATGGTTCTTCTTGGTTTCAAGTGTGTGGTTGAGATTTTGTTGGTTCTTCGTACCTTTGTCAGATAATGAGATAGCTTCGATCACCTTCGGGTTTTAGGTGGTTCTGTGGTTTGGGTCTTGCCATTGGAGATTGTATTTTTTTTTTTTTTTGAAACCACCATCGGAGATTGTTGTTTGTTTTGTATTGTTGAAAAAGCTGGTAAGGACTATCTCTACTCGGGTTGTGTGGACCCTGCACAAGGCGAAACTCACTATGCTTCTGATATGTCATGAGTCCCGGGGTGCTATGGTGTATAGAGGAGGAAATTGGAGCATTGCAATTAGAAGTACGTGAAGAGCTTGTATAGATGATTTTACTTACTATCATATCAGGAAATAAAGCTTGTTGCAGAGATAAAGAGAACTTCCAAAACAGGAAATGAGTTATTCATTTCTTCAGACAGCAACAAAGATTCTTGCTTGGCAGCTAATCAGGCTCAGACAGCAAATAGCAAACTTACAAGGAAGTCTAGCTCAAATGAGAGGCATTGCAACTCATACACAGGCAATGCATGCTCAGACATCTGTTGCTGCTGGCTTGAAGAGTGCCGGGAAAGCAATGTCAGCTATGAATAAGCAAATGGATCCCGTGAAGCTAGCAAAGGTCATTAGAGAATTTCAGAAGCAGTCTGCACAGATGGATATGACTGAGCTCTCGATCGGTATTTGTAATGAGCCGTCTGGCGCGAACAGGCGAACAGCAAGCGCGGGTCGCGAACGAATTGGCGAATTGGGGCGAATTGACAGGCTAATATACAAGGTGGCGCGTTTAAGATCACAAAAATGCCTGGTGGCTCGATTGGCAACGACACTCGTCTAG

Coding sequence (CDS)

ATGAGTTATTCATTTCTTCAGACAGCAACAAAGATTCTTGCTTGGCAGCTAATCAGGCTCAGACAGCAAATAGCAAACTTACAAGGAAGTCTAGCTCAAATGAGAGGCATTGCAACTCATACACAGGCAATGCATGCTCAGACATCTGTTGCTGCTGGCTTGAAGAGTGCCGGGAAAGCAATGTCAGCTATGAATAAGCAAATGGATCCCGTGAAGCTAGCAAAGGTCATTAGAGAATTTCAGAAGCAGTCTGCACAGATGGATATGACTGAGCTCTCGATCGGTATTTGTAATGAGCCGTCTGGCGCGAACAGGCGAACAGCAAGCGCGGGTCGCGAACGAATTGGCGAATTGGGGCGAATTGACAGGCTAATATACAAGGTGGCGCGTTTAAGATCACAAAAATGCCTGGTGGCTCGATTGGCAACGACACTCGTCTAG

Protein sequence

MSYSFLQTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMTELSIGICNEPSGANRRTASAGRERIGELGRIDRLIYKVARLRSQKCLVARLATTLV
Homology
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BLAST of Sed0025109 vs. NCBI nr
Match: XP_022959704.1 (vacuolar protein sorting-associated protein 2 homolog 3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 138.3 bits (347), Expect = 5.4e-29
Identity = 76/84 (90.48%), Postives = 78/84 (92.86%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAGLKSAGKAMS MNK
Sbjct: 106 EAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSVMNK 165

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT 91
           QMDP K AKVIREFQKQSAQMDMT
Sbjct: 166 QMDPAKQAKVIREFQKQSAQMDMT 189

[Close]
BLAST of Sed0025109 vs. NCBI nr
Match: KAG7025452.1 (Vacuolar protein sorting-associated protein 2-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138.3 bits (347), Expect = 5.4e-29
Identity = 76/84 (90.48%), Postives = 78/84 (92.86%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAGLKSAGKAMS MNK
Sbjct: 22  EAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSVMNK 81

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT 91
           QMDP K AKVIREFQKQSAQMDMT
Sbjct: 82  QMDPAKQAKVIREFQKQSAQMDMT 105

[Close]
BLAST of Sed0025109 vs. NCBI nr
Match: XP_022959705.1 (vacuolar protein sorting-associated protein 2 homolog 3-like isoform X2 [Cucurbita moschata] >XP_022959706.1 vacuolar protein sorting-associated protein 2 homolog 3-like isoform X2 [Cucurbita moschata] >KAG6593045.1 Vacuolar protein sorting-associated protein 2-like 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 138.3 bits (347), Expect = 5.4e-29
Identity = 76/84 (90.48%), Postives = 78/84 (92.86%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAGLKSAGKAMS MNK
Sbjct: 55  EAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSVMNK 114

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT 91
           QMDP K AKVIREFQKQSAQMDMT
Sbjct: 115 QMDPAKQAKVIREFQKQSAQMDMT 138

[Close]
BLAST of Sed0025109 vs. NCBI nr
Match: XP_023513488.1 (vacuolar protein sorting-associated protein 2 homolog 3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.5 bits (345), Expect = 9.2e-29
Identity = 75/84 (89.29%), Postives = 78/84 (92.86%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAG+KSAGKAMS MNK
Sbjct: 106 EAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQTSVAAGMKSAGKAMSVMNK 165

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT 91
           QMDP K AKVIREFQKQSAQMDMT
Sbjct: 166 QMDPAKQAKVIREFQKQSAQMDMT 189

[Close]
BLAST of Sed0025109 vs. NCBI nr
Match: XP_023513489.1 (vacuolar protein sorting-associated protein 2 homolog 3-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023513490.1 vacuolar protein sorting-associated protein 2 homolog 3-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.5 bits (345), Expect = 9.2e-29
Identity = 75/84 (89.29%), Postives = 78/84 (92.86%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAG+KSAGKAMS MNK
Sbjct: 55  EAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQTSVAAGMKSAGKAMSVMNK 114

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT 91
           QMDP K AKVIREFQKQSAQMDMT
Sbjct: 115 QMDPAKQAKVIREFQKQSAQMDMT 138

[Close]
BLAST of Sed0025109 vs. ExPASy Swiss-Prot
Match: Q941D5 (Vacuolar protein sorting-associated protein 2 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=VPS2.3 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27
Identity = 69/82 (84.15%), Postives = 74/82 (90.24%), Query Frame = 0 

Query: 9   ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQM 68
           ATKILA QLIRLRQQIANLQGS AQMRGIATHTQAMHA TSVAAG++ A KAM+AM+K M
Sbjct: 57  ATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNM 116

Query: 69  DPVKLAKVIREFQKQSAQMDMT 91
           DP K AKV+REFQKQSAQMDMT
Sbjct: 117 DPAKQAKVMREFQKQSAQMDMT 138

[Close]
BLAST of Sed0025109 vs. ExPASy Swiss-Prot
Match: Q0WTY4 (Vacuolar protein sorting-associated protein 2 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS2.2 PE=1 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 4.2e-24
Identity = 59/84 (70.24%), Postives = 72/84 (85.71%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQI NLQGS AQ+RG+ THTQA++A TS+++G+K A KAM AMNK
Sbjct: 55  EAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNK 114

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT 91
           QM P K AKVI++FQKQSAQ+DMT
Sbjct: 115 QMAPTKQAKVIKDFQKQSAQLDMT 138

[Close]
BLAST of Sed0025109 vs. ExPASy Swiss-Prot
Match: Q6NXD2 (Charged multivesicular body protein 2b OS=Danio rerio OX=7955 GN=chmp2b PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.2e-08
Identity = 31/83 (37.35%), Postives = 55/83 (66.27%), Query Frame = 0 

Query: 9   ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQM 68
           A K+LA QL+++R+Q        +++  ++T T+ M++Q  +A  + +  K M A+NK+M
Sbjct: 57  ACKVLAKQLVQVRKQKTRTYAVSSKVTSMSTQTKLMNSQMKMAGAMATTTKTMQAVNKKM 116

Query: 69  DPVKLAKVIREFQKQSAQMDMTE 92
           DP K  + ++ FQK++A+MDMTE
Sbjct: 117 DPKKTMQTLQNFQKETAKMDMTE 139

[Close]
BLAST of Sed0025109 vs. ExPASy Swiss-Prot
Match: Q7SYR0 (Charged multivesicular body protein 2b-A OS=Xenopus laevis OX=8355 GN=chmp2b-a PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 30/83 (36.14%), Postives = 53/83 (63.86%), Query Frame = 0 

Query: 9   ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQM 68
           A K+LA QL++LR+Q        +++  ++T T+ M +Q  +A  + +  K M A+NK+M
Sbjct: 57  ACKVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAVNKKM 116

Query: 69  DPVKLAKVIREFQKQSAQMDMTE 92
           DP K  + ++ FQK++ +M+MTE
Sbjct: 117 DPQKTLQTMQNFQKENMKMEMTE 139

[Close]
BLAST of Sed0025109 vs. ExPASy Swiss-Prot
Match: Q5F3A2 (Charged multivesicular body protein 2b OS=Gallus gallus OX=9031 GN=CHMP2B PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 30/83 (36.14%), Postives = 54/83 (65.06%), Query Frame = 0 

Query: 9   ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQM 68
           A K+LA QL++LR+Q        +++  ++T T+ M++Q  +A  + +  K M A+NK+M
Sbjct: 57  ACKVLAKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKM 116

Query: 69  DPVKLAKVIREFQKQSAQMDMTE 92
           DP K  + ++ FQK++ +M+MTE
Sbjct: 117 DPQKTLQTMQNFQKENMKMEMTE 139

[Close]
BLAST of Sed0025109 vs. ExPASy TrEMBL
Match: A0A6J1H5L9 (vacuolar protein sorting-associated protein 2 homolog 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460698 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.6e-29
Identity = 76/84 (90.48%), Postives = 78/84 (92.86%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAGLKSAGKAMS MNK
Sbjct: 55  EAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSVMNK 114

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT 91
           QMDP K AKVIREFQKQSAQMDMT
Sbjct: 115 QMDPAKQAKVIREFQKQSAQMDMT 138

[Close]
BLAST of Sed0025109 vs. ExPASy TrEMBL
Match: A0A6J1H8V7 (vacuolar protein sorting-associated protein 2 homolog 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460698 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.6e-29
Identity = 76/84 (90.48%), Postives = 78/84 (92.86%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAGLKSAGKAMS MNK
Sbjct: 106 EAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSVMNK 165

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT 91
           QMDP K AKVIREFQKQSAQMDMT
Sbjct: 166 QMDPAKQAKVIREFQKQSAQMDMT 189

[Close]
BLAST of Sed0025109 vs. ExPASy TrEMBL
Match: A0A6J1KXA1 (vacuolar protein sorting-associated protein 2 homolog 3-like OS=Cucurbita maxima OX=3661 GN=LOC111497975 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.5e-29
Identity = 75/84 (89.29%), Postives = 78/84 (92.86%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAG+KSAGKAMS MNK
Sbjct: 55  EAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQTSVAAGMKSAGKAMSVMNK 114

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT 91
           QMDP K AKVIREFQKQSAQMDMT
Sbjct: 115 QMDPAKQAKVIREFQKQSAQMDMT 138

[Close]
BLAST of Sed0025109 vs. ExPASy TrEMBL
Match: A0A0A0K5C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372290 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 5.8e-29
Identity = 90/158 (56.96%), Postives = 104/158 (65.82%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAG+KSA KAMSAMNK
Sbjct: 55  EAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQTSVAAGMKSASKAMSAMNK 114

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT------------------------------ELSIGI 126
           QM+PVK AKVIREFQKQSAQMDMT                              E+ + +
Sbjct: 115 QMNPVKQAKVIREFQKQSAQMDMTTEMISDAIDDALDDDEAEEETEDLTNQVLDEIGVDV 174

Query: 127 CNEPSGANR-RTASAGRERIGELGRIDRLIYKVARLRS 134
            ++ S A + R AS   E +G  G ID L  ++A LR+
Sbjct: 175 ASQLSTAPKGRIASKNTEGVGSSG-IDELEKRLAALRN 211

[Close]
BLAST of Sed0025109 vs. ExPASy TrEMBL
Match: A0A5D3D2N2 (Vacuolar protein sorting-associated protein 2-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002370 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 9.9e-29
Identity = 75/84 (89.29%), Postives = 79/84 (94.05%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAG+KSA KAMSAMNK
Sbjct: 61  EAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQTSVAAGMKSASKAMSAMNK 120

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT 91
           QM+PVK AKVIREFQKQSAQMDMT
Sbjct: 121 QMNPVKQAKVIREFQKQSAQMDMT 144

[Close]
BLAST of Sed0025109 vs. TAIR 10
Match: AT1G03950.1 (vacuolar protein sorting-associated protein 2.3 )

HSP 1 Score: 124.4 bits (311), Expect = 7.5e-29
Identity = 69/82 (84.15%), Postives = 74/82 (90.24%), Query Frame = 0 

Query: 9   ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQM 68
           ATKILA QLIRLRQQIANLQGS AQMRGIATHTQAMHA TSVAAG++ A KAM+AM+K M
Sbjct: 57  ATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNM 116

Query: 69  DPVKLAKVIREFQKQSAQMDMT 91
           DP K AKV+REFQKQSAQMDMT
Sbjct: 117 DPAKQAKVMREFQKQSAQMDMT 138

[Close]
BLAST of Sed0025109 vs. TAIR 10
Match: AT5G44560.1 (SNF7 family protein )

HSP 1 Score: 112.5 bits (280), Expect = 3.0e-25
Identity = 59/84 (70.24%), Postives = 72/84 (85.71%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQI NLQGS AQ+RG+ THTQA++A TS+++G+K A KAM AMNK
Sbjct: 55  EAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNK 114

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT 91
           QM P K AKVI++FQKQSAQ+DMT
Sbjct: 115 QMAPTKQAKVIKDFQKQSAQLDMT 138

[Close]
BLAST of Sed0025109 vs. TAIR 10
Match: AT5G44560.2 (SNF7 family protein )

HSP 1 Score: 112.5 bits (280), Expect = 3.0e-25
Identity = 59/84 (70.24%), Postives = 72/84 (85.71%), Query Frame = 0 

Query: 7   QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNK 66
           + ATKILA QL+RLRQQI NLQGS AQ+RG+ THTQA++A TS+++G+K A KAM AMNK
Sbjct: 35  EAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNK 94

Query: 67  QMDPVKLAKVIREFQKQSAQMDMT 91
           QM P K AKVI++FQKQSAQ+DMT
Sbjct: 95  QMAPTKQAKVIKDFQKQSAQLDMT 118

[Close]
BLAST of Sed0025109 vs. TAIR 10
Match: AT2G06530.1 (SNF7 family protein )

HSP 1 Score: 52.0 bits (123), Expect = 4.7e-07
Identity = 28/87 (32.18%), Postives = 51/87 (58.62%), Query Frame = 0 

Query: 9   ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQM 68
           A K++A  LIR R QI       +Q++G++   Q + +  ++   +K   KAM  MN+QM
Sbjct: 59  AVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQM 118

Query: 69  DPVKLAKVIREFQKQSAQMDMTELSIG 96
           +   L K+++EF++Q+ +M+M    +G
Sbjct: 119 NLPSLQKIMQEFERQNEKMEMVSEVMG 145

The following BLAST results are available for this feature:
BLAST of Sed0025109 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022959704.15.4e-2990.48vacuolar protein sorting-associated protein 2 homolog 3-like isoform X1 [Cucurbi... [more]
KAG7025452.15.4e-2990.48Vacuolar protein sorting-associated protein 2-like 3, partial [Cucurbita argyros... [more]
XP_022959705.15.4e-2990.48vacuolar protein sorting-associated protein 2 homolog 3-like isoform X2 [Cucurbi... [more]
XP_023513488.19.2e-2989.29vacuolar protein sorting-associated protein 2 homolog 3-like isoform X1 [Cucurbi... [more]
XP_023513489.19.2e-2989.29vacuolar protein sorting-associated protein 2 homolog 3-like isoform X2 [Cucurbi... [more]
BLAST of Sed0025109 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q941D51.1e-2784.15Vacuolar protein sorting-associated protein 2 homolog 3 OS=Arabidopsis thaliana ... [more]
Q0WTY44.2e-2470.24Vacuolar protein sorting-associated protein 2 homolog 2 OS=Arabidopsis thaliana ... [more]
Q6NXD23.2e-0837.35Charged multivesicular body protein 2b OS=Danio rerio OX=7955 GN=chmp2b PE=2 SV=... [more]
Q7SYR01.2e-0736.14Charged multivesicular body protein 2b-A OS=Xenopus laevis OX=8355 GN=chmp2b-a P... [more]
Q5F3A21.2e-0736.14Charged multivesicular body protein 2b OS=Gallus gallus OX=9031 GN=CHMP2B PE=2 S... [more]
BLAST of Sed0025109 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H5L92.6e-2990.48vacuolar protein sorting-associated protein 2 homolog 3-like isoform X2 OS=Cucur... [more]
A0A6J1H8V72.6e-2990.48vacuolar protein sorting-associated protein 2 homolog 3-like isoform X1 OS=Cucur... [more]
A0A6J1KXA14.5e-2989.29vacuolar protein sorting-associated protein 2 homolog 3-like OS=Cucurbita maxima... [more]
A0A0A0K5C05.8e-2956.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372290 PE=4 SV=1[more]
A0A5D3D2N29.9e-2989.29Vacuolar protein sorting-associated protein 2-like protein 3 OS=Cucumis melo var... [more]
BLAST of Sed0025109 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G03950.17.5e-2984.15vacuolar protein sorting-associated protein 2.3 [more]
AT5G44560.13.0e-2570.24SNF7 family protein [more]
AT5G44560.23.0e-2570.24SNF7 family protein [more]
AT2G06530.14.7e-0732.18SNF7 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.1230coord: 6..95
e-value: 1.7E-22
score: 82.0
NoneNo IPR availablePANTHERPTHR10476:SF45BNAANNG10150D PROTEINcoord: 6..90
NoneNo IPR availablePANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 6..90
IPR005024Snf7 familyPFAMPF03357Snf7coord: 9..92
e-value: 3.9E-17
score: 62.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0025109.1Sed0025109.1mRNA
Sed0025109.2Sed0025109.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007034 vacuolar transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005768 endosome
cellular_component GO:0016021 integral component of membrane