Sed0024235 (gene) Chayote v1

Overview


Name	Sed0024235
Type	gene
Organism	Sechium edule (Chayote v1)
Description	glucose-induced degradation protein 8 homolog
Location	LG08: 36396846 .. 36400332 (+)
RNA-Seq Expression	Sed0024235
Synteny	Sed0024235

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAGCGAGGTCCGGAAAAGACCCGTTGAGCCCAAGACCCGAATCGAATAACACGAAGAAGTTTGATTTCCCGATTGACGCATTTTCGATAGAAAACGTTGCAATCCACTGCGATCAGCAAAGAATCTCGGTTCATATCTTCTGAGAGTAATTTACGCTTCCAAGGTACAATTTTCAGTCATTTTTCTGGAATTTGAAATTGCCGGATTTATTGTGAATTTCCGACTGCTCAATTCGTTCCCCTCTCTAAATTTAGTAGAATTAGGTTTCATTCTTTAATCAAATTTGTCGTAATTCTTCCCATTTTTGTCGGATTTTTATTACAGTAATCGGATTTTCTTTCTCTTGTTTTTTTTTAACTTGGATTATTTTAGGTGAGATTTGCGGATTTGTTTGTGTATAATCGATGGGTTTGAATCTGGTAAACTGATGTCATTGTTCTGGATTGTGTTTCATCAATTTGCAGAGTACGAAGCGATGGTATGTGACTTGAAACTCACATTCTTGATTGCATAAGCATACAACATCTTATTGATTCTAATTTAACTTTCTTAAAGGAAAGTGGAATTTGAGTTCACCGCTGAACATAAACTGAGTAATTAGAGTTAGAGGTCTTTCAATTCTGATTAAACATCTCCAAGGGGTGGCTCAGTGGTTGAAGACTTGGACTTTAAGGGTATGCTCTCCTCAAGTTCCCAAGGTTCGAGACCCACTTGTGGCATTACTCTTTCGATATCTCCGATGCCTGGCCTAGGGACGGACGTGCTTATCCTTGTTTCAAAAAAATATCTGATTTAAACATCATAGAGTTGGCCTAGTGGTCAAGAAGGTTTTGAGAAACTAAGAGGTAATCTTCAATCCATGGTGGTCAGCTACATAGAAATTAATTTCCTACGAATTTTCTTGACATCCAAATGTTATATGATCAACCTGTATTTCTCGGGACAATAGTTGAGGTGTGCACAAGTTGGCCTAGAGAGTCATGGGTATTAAAAAAAATTGATGTTATAGTTCATTTCCCCATAATATGCTTTGGCTTTACTCAGGCCACGTCAAAGAAGGTTATTACGAGGGAAGAGTGGGAGAAGAAGCTTAACGACCTAACCATTAGAAAAGAAGACATGAACAAATTGGTAATGAATTTCCTCGTCACTGAAGGGTATGTTGACGCAGCTGAGAAATTTCGGACGGAGTCTGGGGCTGAACGTATCCTTTAATTAATTCAGCAATTAAACTTCTCTTTCCCACCCTCTTTTGTTTATGTGGTGTTCTAGAGATTTGTCTTTTTATTTGATTCTCCTTATGGATATATAGCAGAAATAGATCTTGCAACCATAACGGATAGAATGGCCGTTAAGAAGGCAGTACAATGCGGTAATGTTGAGGACGCAATTGAGAAAGTGAATGATTTGAATCCTGAGGTTTGATTCCTGTACAAACCTATGTTTGCTAGTTAGATTAAATGACCATCAAGAATTTGAGTAACAATAGTATAGAACAAACTATGCCCTGCAGCCTTTGATATGTTTTCTGTGAGCACCTACTGTGGACATGAAAATATTTTATGCTGTTGCTCTCCGTGATGGATATGTTTTTGAATTGATTATGCATTTGGAAATCTGAATGATTTATGCCATGTTAATATGTTATATGTTATAGACCAGAAACCAATCAAAGTTCTTCACATAATTACTGGCTTGCTGCTCTGCCCGCCTTCGTAGTTTTCGTGTTCATCGAACCAAAATCTGGTGTGTACTTATGATATTAGACATTAGCTGTCTCTTTTAGCATCTACTCACGGTATATTGCTCTATGAGTGGATGGTATGGATTTGATTGATTTATTAGGAATTTGTCAATAAGATTTTCTTTTTTTCCTTTCTTTTTGAGGATGTGATTCCACTCCATTTGTGGCTTTAGCATAAGTGGTCTTTTGACTCGCATAAATATGTTTTGAATGGGAAGTTGGAAAATTGTTGGAAATTGTTTGTTTGATGTTCTTTCTCCCATTCTTGTTGTTCTGTATCTGAGCTCAAATCTAAAACAAACTCTTCTTGCAGATATTGGATACAAATCCCCAATTGTTTTTTCATCTACAACAGCAAAGGTTGATAGAACTAATTCGTAATGGAAAAGTAGAAGAAGCTCTTGAATTTGCTCAGGAGGAACTTGCACCAAGGGGAGAAGAAAATGTAATTTATGTGGCTTTTGCTTTCTCTTTGACTATCATCATATTGTAGCTTATGAGTTATGATAGATCAATAAAGTTTATTAATTGTTTTACTTCTACTTGATGACATTTGCCTTATGAACATTTAAAACTCTGGATTTTCCTTTCTCTTCATCGGCTCTCCAAAATAACACTCAAGTTCTTATACTTCTTTCAGCAAAGCTTCTTGGAAGAGTTGGAGAGAACAGTTGCTTTACTTGCTTTCGAAGATGTTTCCAACTGTCCGGTGCGAGACCTTCTAGACATCTCTCAGCGCCTGAAGACAGCGAGTGAAGTTAATGCAGCCATCTTAACAAGTCAGAGCCATGAAAAAGGTTAAGATTGTTGCCCCCCTTTTATATTTGTATGAGTTGATTTAATAGTCAAGAGGGACCGGAAGAATTAAAAAGGTTATGGATTCATTCAATACATAGTGACCACTTACTTAAAGAATTAACATCGTATGGGTGTCATGGTCAACCGAATATTATAGGGTCAAGCAGTTTATTCCATCAAAATACTCGAATGCGCATAAGCTTACTTGGACACTCTAGGACACAAAAAAAACCATTAAAACAGTATTTCTCCGTATTAAAGAAATGCTGCTAGATTCTGGCCTGTGTCCAATGGCATCATGGCATGAGCCTTTGGGGTTAATATTAGTACTAGAACAGAGCACATAGTACATTTTGATCTCAACTCTAGGGGAGACATGACAATATTTAGAGTCAAGTATCAACTAAATATTTCTGACATGCAACCTGATTTAGTGAAGTAGTGACTAACAAACTATGATTTGGCATCGTTTTACAGATCCGAAGCTGCCGAGCTTGCTGAAGATGTTAATGTGGGCCCAGAACCAACTCGATGAGAAAGCAGCTTACCCTCGCATCAATGATTTATCCACAGCAATGCTTGAAGATCCTCCTATCTGATATTATGTCATTTCATAAGGACGTAGGAAGATATTTCTCAACGTATTTGATTGATACATCATGGAAGAAGGAAAAAAAAACTTATCTAGGTTGTGCCTAGAATTATCATTTGTAGTTTCCTCTTTTTCTTTCATCGTCAAATGCTATGTTAGTTGTGTACAAAAGATTGTCAAACATTTTATTTTTCTAGTATTGATTGTGTGAGATATTTGCAAAAAATATCGTTTCGATCATGGTATATTCTTGGACTTTCAAATGTCCAATGTATTTTTTGAAAAATTAATTAGTGATAAGTTTGGTGTTAATTTTAATTCAAATTGTTTCAATAATATTGATAAGGGGAA

mRNA sequence

TGAAGCGAGGTCCGGAAAAGACCCGTTGAGCCCAAGACCCGAATCGAATAACACGAAGAAGTTTGATTTCCCGATTGACGCATTTTCGATAGAAAACGTTGCAATCCACTGCGATCAGCAAAGAATCTCGGTTCATATCTTCTGAGAGTAATTTACGCTTCCAAGGTGAGATTTGCGGATTTGTTTGTGTATAATCGATGGGTTTGAATCTGGTAAACTGATGTCATTGTTCTGGATTGTGTTTCATCAATTTGCAGAGTACGAAGCGATGGCCACGTCAAAGAAGGTTATTACGAGGGAAGAGTGGGAGAAGAAGCTTAACGACCTAACCATTAGAAAAGAAGACATGAACAAATTGGTAATGAATTTCCTCGTCACTGAAGGGTATGTTGACGCAGCTGAGAAATTTCGGACGGAGTCTGGGGCTGAACCAGAAATAGATCTTGCAACCATAACGGATAGAATGGCCGTTAAGAAGGCAGTACAATGCGGTAATGTTGAGGACGCAATTGAGAAAGTGAATGATTTGAATCCTGAGATATTGGATACAAATCCCCAATTGTTTTTTCATCTACAACAGCAAAGGTTGATAGAACTAATTCGTAATGGAAAAGTAGAAGAAGCTCTTGAATTTGCTCAGGAGGAACTTGCACCAAGGGGAGAAGAAAATCAAAGCTTCTTGGAAGAGTTGGAGAGAACAGTTGCTTTACTTGCTTTCGAAGATGTTTCCAACTGTCCGGTGCGAGACCTTCTAGACATCTCTCAGCGCCTGAAGACAGCGAGTGAAGTTAATGCAGCCATCTTAACAAGTCAGAGCCATGAAAAAGATCCGAAGCTGCCGAGCTTGCTGAAGATGTTAATGTGGGCCCAGAACCAACTCGATGAGAAAGCAGCTTACCCTCGCATCAATGATTTATCCACAGCAATGCTTGAAGATCCTCCTATCTGATATTATGTCATTTCATAAGGACGTAGGAAGATATTTCTCAACGTATTTGATTGATACATCATGGAAGAAGGAAAAAAAAACTTATCTAGGTTGTGCCTAGAATTATCATTTGTAGTTTCCTCTTTTTCTTTCATCGTCAAATGCTATGTTAGTTGTGTACAAAAGATTGTCAAACATTTTATTTTTCTAGTATTGATTGTGTGAGATATTTGCAAAAAATATCGTTTCGATCATGGTATATTCTTGGACTTTCAAATGTCCAATGTATTTTTTGAAAAATTAATTAGTGATAAGTTTGGTGTTAATTTTAATTCAAATTGTTTCAATAATATTGATAAGGGGAA

Coding sequence (CDS)

ATGTCATTGTTCTGGATTGTGTTTCATCAATTTGCAGAGTACGAAGCGATGGCCACGTCAAAGAAGGTTATTACGAGGGAAGAGTGGGAGAAGAAGCTTAACGACCTAACCATTAGAAAAGAAGACATGAACAAATTGGTAATGAATTTCCTCGTCACTGAAGGGTATGTTGACGCAGCTGAGAAATTTCGGACGGAGTCTGGGGCTGAACCAGAAATAGATCTTGCAACCATAACGGATAGAATGGCCGTTAAGAAGGCAGTACAATGCGGTAATGTTGAGGACGCAATTGAGAAAGTGAATGATTTGAATCCTGAGATATTGGATACAAATCCCCAATTGTTTTTTCATCTACAACAGCAAAGGTTGATAGAACTAATTCGTAATGGAAAAGTAGAAGAAGCTCTTGAATTTGCTCAGGAGGAACTTGCACCAAGGGGAGAAGAAAATCAAAGCTTCTTGGAAGAGTTGGAGAGAACAGTTGCTTTACTTGCTTTCGAAGATGTTTCCAACTGTCCGGTGCGAGACCTTCTAGACATCTCTCAGCGCCTGAAGACAGCGAGTGAAGTTAATGCAGCCATCTTAACAAGTCAGAGCCATGAAAAAGATCCGAAGCTGCCGAGCTTGCTGAAGATGTTAATGTGGGCCCAGAACCAACTCGATGAGAAAGCAGCTTACCCTCGCATCAATGATTTATCCACAGCAATGCTTGAAGATCCTCCTATCTGA

Protein sequence

MSLFWIVFHQFAEYEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDPPI

Homology

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BLAST of Sed0024235 vs. NCBI nr
Match: XP_022954757.1 (protein GID8 homolog [Cucurbita moschata] >XP_022954758.1 protein GID8 homolog [Cucurbita moschata] >XP_022994456.1 protein GID8 homolog [Cucurbita maxima] >XP_022994457.1 protein GID8 homolog [Cucurbita maxima] >XP_022994458.1 protein GID8 homolog [Cucurbita maxima] >XP_023542747.1 protein GID8 homolog [Cucurbita pepo subsp. pepo] >XP_023542748.1 protein GID8 homolog [Cucurbita pepo subsp. pepo] >KAG7012414.1 Glucose-induced degradation protein 8-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 453.0 bits (1164), Expect = 1.6e-123
Identity = 235/242 (97.11%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MSLFWIVFHQFAEYEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAA 60
           MSLFWIV  QFAE EAMATSKKVITREEWEKKLND+ IRKEDMNKLVMNFLVTEGYVDAA
Sbjct: 1   MSLFWIVIRQFAENEAMATSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDAA 60

Query: 61  EKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           EKFR ESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  EKFRMESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180
           QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI
Sbjct: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQ+QLDEKAAYPRINDLSTAMLEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQDQLDEKAAYPRINDLSTAMLEDP 240

Query: 241 PI 243
           PI
Sbjct: 241 PI 242

[Close]

BLAST of Sed0024235 vs. NCBI nr
Match: XP_004146589.1 (protein GID8 homolog [Cucumis sativus] >XP_008442181.1 PREDICTED: glucose-induced degradation protein 8 homolog isoform X1 [Cucumis melo] >XP_008442188.1 PREDICTED: glucose-induced degradation protein 8 homolog isoform X1 [Cucumis melo] >XP_008442195.1 PREDICTED: glucose-induced degradation protein 8 homolog isoform X1 [Cucumis melo] >XP_011653065.1 protein GID8 homolog [Cucumis sativus] >KGN64642.1 hypothetical protein Csa_013166 [Cucumis sativus])

HSP 1 Score: 452.6 bits (1163), Expect = 2.1e-123
Identity = 234/242 (96.69%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MSLFWIVFHQFAEYEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAA 60
           MSLFWIV  QFAE EAMATSKKVITREEWEKKLND+ IRKEDMNKLVMNFLVTEGYVDAA
Sbjct: 1   MSLFWIVIRQFAENEAMATSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDAA 60

Query: 61  EKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           EKFR ESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  EKFRMESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180
           QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI
Sbjct: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQ+QLDEKAAYPRINDLSTAMLEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQDQLDEKAAYPRINDLSTAMLEDP 240

Query: 241 PI 243
           P+
Sbjct: 241 PV 242

[Close]

BLAST of Sed0024235 vs. NCBI nr
Match: KAA0056956.1 (LisH domain-containing protein/CLTH domain-containing protein [Cucumis melo var. makuwa] >TYK26383.1 LisH domain-containing protein/CLTH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 452.6 bits (1163), Expect = 2.1e-123
Identity = 234/242 (96.69%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MSLFWIVFHQFAEYEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAA 60
           MSLFWIV  QFAE EAMATSKKVITREEWEKKLND+ IRKEDMNKLVMNFLVTEGYVDAA
Sbjct: 81  MSLFWIVIRQFAENEAMATSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDAA 140

Query: 61  EKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           EKFR ESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 141 EKFRMESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 200

Query: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180
           QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI
Sbjct: 201 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 260

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQ+QLDEKAAYPRINDLSTAMLEDP
Sbjct: 261 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQDQLDEKAAYPRINDLSTAMLEDP 320

Query: 241 PI 243
           P+
Sbjct: 321 PV 322

[Close]

BLAST of Sed0024235 vs. NCBI nr
Match: XP_038893683.1 (protein GID8 homolog [Benincasa hispida] >XP_038893684.1 protein GID8 homolog [Benincasa hispida])

HSP 1 Score: 451.4 bits (1160), Expect = 4.8e-123
Identity = 233/242 (96.28%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MSLFWIVFHQFAEYEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAA 60
           MSLFWIV  QFAE EAMATSKKVITREEWEKKLND+ IRKEDMNKLVMNFLVTEGYVDAA
Sbjct: 1   MSLFWIVIRQFAENEAMATSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDAA 60

Query: 61  EKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           EKFR ESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  EKFRMESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180
           QRLIELIRNGKVEEALEFAQEELAPRGEEN+SFLEELERTVALLAFEDVSNCPVRDLLDI
Sbjct: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENESFLEELERTVALLAFEDVSNCPVRDLLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQ+QLDEKAAYPRINDLSTAMLEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQDQLDEKAAYPRINDLSTAMLEDP 240

Query: 241 PI 243
           P+
Sbjct: 241 PV 242

[Close]

BLAST of Sed0024235 vs. NCBI nr
Match: XP_022140081.1 (glucose-induced degradation protein 8 homolog [Momordica charantia])

HSP 1 Score: 447.6 bits (1150), Expect = 6.9e-122
Identity = 232/242 (95.87%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MSLFWIVFHQFAEYEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAA 60
           MSLFWIV  QFAE EAMATSKKVITREEWEKKLND+ IRKEDMNKLVMNFLVTEGYVDAA
Sbjct: 1   MSLFWIVIRQFAENEAMATSKKVITREEWEKKLNDIKIRKEDMNKLVMNFLVTEGYVDAA 60

Query: 61  EKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           EKFR ESGAEPEIDLATITDRMAVK+AVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  EKFRMESGAEPEIDLATITDRMAVKRAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180
           QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI
Sbjct: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQ+QLDEKA YPRINDLSTAMLEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQDQLDEKATYPRINDLSTAMLEDP 240

Query: 241 PI 243
            I
Sbjct: 241 AI 242

[Close]

BLAST of Sed0024235 vs. ExPASy Swiss-Prot
Match: Q84WK5 (Protein GID8 homolog OS=Arabidopsis thaliana OX=3702 GN=GID8 PE=1 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.6e-105
Identity = 201/241 (83.40%), Postives = 216/241 (89.63%), Query Frame = 0


Query: 1   MSLFWIVFHQFAE-YEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDA 60
           MSLF I  +Q  E  E MATSKK+ITREEWEKKLN + +RKEDMN LVMNFLVTEGYV+A
Sbjct: 1   MSLFRIFINQLEEDDEDMATSKKMITREEWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEA 60

Query: 61  AEKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQ 120
           AEKF+ ESG +PEIDLATITDRMAVKKAVQ GNVEDAIEKVNDLNPEILDTNP+LFFHLQ
Sbjct: 61  AEKFQRESGTKPEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQ 120

Query: 121 QQRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLD 180
           QQRLIELIR GK EEALEFAQEELAPRGEENQ+FLEELE+TVALL F+D S CPV++LLD
Sbjct: 121 QQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLD 180

Query: 181 ISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLED 240
           +S RLKTASEVNAAILTSQSHEKDPKLPSLLKML+WAQ QLDEKA YP INDLST  LED
Sbjct: 181 LSHRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLED 240

[Close]

BLAST of Sed0024235 vs. ExPASy Swiss-Prot
Match: Q54X16 (Glucose-induced degradation protein 8 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0279265 PE=3 SV=2)

HSP 1 Score: 276.2 bits (705), Expect = 3.6e-73
Identity = 137/218 (62.84%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 21  KKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGAEPEIDLATITD 80
           KKVI+  EW+ KL ++ I K D+NKLVMN+LV EGY +AA KF+ ES  +  +DLA+I D
Sbjct: 11  KKVISTSEWDDKLAEVNISKSDLNKLVMNYLVIEGYQEAAAKFQEESSTQTTVDLASIAD 70

Query: 81  RMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEALEFAQ 140
           RMA++ A+QCG+VE  IE VNDLNPEILDTNPQL+FHLQQQ+LIELIR G   EAL+FAQ
Sbjct: 71  RMAIRSAIQCGDVEKGIEIVNDLNPEILDTNPQLYFHLQQQKLIELIRKGMTAEALKFAQ 130

Query: 141 EELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDISQRLKTASEVNAAILTSQSH 200
           +ELAP+GEEN  FLEELE+T++LL FED +  P+  LLD SQR KTA E+N+AIL SQS 
Sbjct: 131 DELAPQGEENNKFLEELEKTISLLVFEDTAKSPLSSLLDHSQRQKTAGELNSAILLSQSQ 190

Query: 201 EKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLE 239
           +KDPKLP++LK+L WAQ QLD K  YP+I +  T   E
Sbjct: 191 DKDPKLPTILKLLKWAQTQLDSKCIYPKITNTVTGEYE 228

[Close]

BLAST of Sed0024235 vs. ExPASy Swiss-Prot
Match: Q32L52 (Glucose-induced degradation protein 8 homolog OS=Bos taurus OX=9913 GN=GID8 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 9.2e-61
Identity = 115/218 (52.75%), Postives = 166/218 (76.15%), Query Frame = 0


Query: 24  ITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGAEPEIDLATITDRMA 83
           IT++EW +KLN+L +++ DMN+L+MN+LVTEG+ +AAEKFR ESG EP +DL T+ +R+ 
Sbjct: 10  ITKDEWMEKLNNLHVQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVDLETLDERIK 69

Query: 84  VKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEALEFAQEEL 143
           +++ +  G +++AI  +N L+PE+LDTN  L+FHLQQQ LIELIR  + E ALEFAQ +L
Sbjct: 70  IREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQL 129

Query: 144 APRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDISQRLKTASEVNAAILTSQSHEKD 203
           A +GEE++  L E+ERT+ALLAF++  + P  DLL++ QR K  SEVN A+L  ++ E  
Sbjct: 130 AEQGEESRECLTEMERTLALLAFDNPEDSPFGDLLNMMQRQKVWSEVNQAVLDYENREST 189

Query: 204 PKLPSLLKMLMWAQNQLDE-KAAYPRINDLSTAMLEDP 241
           PKL  LLK+L+WAQN+LD+ K  YP++ DLS  ++E+P
Sbjct: 190 PKLAKLLKLLLWAQNELDQKKVKYPKMTDLSKGVIEEP 227

[Close]

BLAST of Sed0024235 vs. ExPASy Swiss-Prot
Match: Q5ZKQ7 (Glucose-induced degradation protein 8 homolog OS=Gallus gallus OX=9031 GN=GID8 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-60
Identity = 116/218 (53.21%), Postives = 164/218 (75.23%), Query Frame = 0


Query: 24  ITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGAEPEIDLATITDRMA 83
           IT++EW +KLN+L I++ DMN+L+MN+LVTEG+ +AAEKFR ESG EP +DL T+ +R+ 
Sbjct: 10  ITKDEWMEKLNNLHIQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVDLETLDERIK 69

Query: 84  VKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEALEFAQEEL 143
           +++ +  G +++AI  +N L+PE+LDTN  L+FHLQQQ LIELIR  + E ALEFAQ +L
Sbjct: 70  IREMILKGQIQEAISLINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQL 129

Query: 144 APRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDISQRLKTASEVNAAILTSQSHEKD 203
           A +GEE++  L E+ERT+ALLAF++    P  DLL++ QR K  SEVN A+L  ++ E  
Sbjct: 130 AEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYENREST 189

Query: 204 PKLPSLLKMLMWAQNQLDE-KAAYPRINDLSTAMLEDP 241
           PKL  LLK+L+WAQN+LD+ K  YP++ DLS   +E+P
Sbjct: 190 PKLAKLLKLLLWAQNELDQKKVKYPKMTDLSKGTIEEP 227

[Close]

BLAST of Sed0024235 vs. ExPASy Swiss-Prot
Match: Q9D7M1 (Glucose-induced degradation protein 8 homolog OS=Mus musculus OX=10090 GN=Gid8 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.7e-60
Identity = 115/218 (52.75%), Postives = 163/218 (74.77%), Query Frame = 0


Query: 24  ITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGAEPEIDLATITDRMA 83
           IT++EW +KLN+L +++ DMN+L+MN+LVTEG+ +AAEKFR ESG EP +DL T+ +R+ 
Sbjct: 10  ITKDEWMEKLNNLHVQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVDLETLDERIK 69

Query: 84  VKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEALEFAQEEL 143
           +++ +  G +++AI  +N L+PE+LDTN  L+FHLQQQ LIELIR  + E ALEFAQ +L
Sbjct: 70  IREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQL 129

Query: 144 APRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDISQRLKTASEVNAAILTSQSHEKD 203
           A +GEE++  L E+ERT+ALLAF+     P  DLL + QR K  SEVN A+L  ++ E  
Sbjct: 130 AEQGEESRECLTEMERTLALLAFDSPEESPFGDLLHMMQRQKVWSEVNQAVLDYENREST 189

Query: 204 PKLPSLLKMLMWAQNQLDE-KAAYPRINDLSTAMLEDP 241
           PKL  LLK+L+WAQN+LD+ K  YP++ DLS  ++E+P
Sbjct: 190 PKLAKLLKLLLWAQNELDQKKVKYPKMTDLSKGVIEEP 227

[Close]

BLAST of Sed0024235 vs. ExPASy TrEMBL
Match: A0A6J1JZ68 (protein GID8 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490172 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.9e-124
Identity = 235/242 (97.11%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MSLFWIVFHQFAEYEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAA 60
           MSLFWIV  QFAE EAMATSKKVITREEWEKKLND+ IRKEDMNKLVMNFLVTEGYVDAA
Sbjct: 1   MSLFWIVIRQFAENEAMATSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDAA 60

Query: 61  EKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           EKFR ESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  EKFRMESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180
           QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI
Sbjct: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQ+QLDEKAAYPRINDLSTAMLEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQDQLDEKAAYPRINDLSTAMLEDP 240

Query: 241 PI 243
           PI
Sbjct: 241 PI 242

[Close]

BLAST of Sed0024235 vs. ExPASy TrEMBL
Match: A0A6J1GS04 (protein GID8 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456915 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.9e-124
Identity = 235/242 (97.11%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MSLFWIVFHQFAEYEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAA 60
           MSLFWIV  QFAE EAMATSKKVITREEWEKKLND+ IRKEDMNKLVMNFLVTEGYVDAA
Sbjct: 1   MSLFWIVIRQFAENEAMATSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDAA 60

Query: 61  EKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           EKFR ESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  EKFRMESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180
           QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI
Sbjct: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQ+QLDEKAAYPRINDLSTAMLEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQDQLDEKAAYPRINDLSTAMLEDP 240

Query: 241 PI 243
           PI
Sbjct: 241 PI 242

[Close]

BLAST of Sed0024235 vs. ExPASy TrEMBL
Match: A0A1S3B548 (glucose-induced degradation protein 8 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486111 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.0e-123
Identity = 234/242 (96.69%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MSLFWIVFHQFAEYEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAA 60
           MSLFWIV  QFAE EAMATSKKVITREEWEKKLND+ IRKEDMNKLVMNFLVTEGYVDAA
Sbjct: 1   MSLFWIVIRQFAENEAMATSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDAA 60

Query: 61  EKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           EKFR ESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  EKFRMESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180
           QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI
Sbjct: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQ+QLDEKAAYPRINDLSTAMLEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQDQLDEKAAYPRINDLSTAMLEDP 240

Query: 241 PI 243
           P+
Sbjct: 241 PV 242

[Close]

BLAST of Sed0024235 vs. ExPASy TrEMBL
Match: A0A5A7URR5 (LisH domain-containing protein/CLTH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00450 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.0e-123
Identity = 234/242 (96.69%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MSLFWIVFHQFAEYEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAA 60
           MSLFWIV  QFAE EAMATSKKVITREEWEKKLND+ IRKEDMNKLVMNFLVTEGYVDAA
Sbjct: 81  MSLFWIVIRQFAENEAMATSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDAA 140

Query: 61  EKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           EKFR ESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 141 EKFRMESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 200

Query: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180
           QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI
Sbjct: 201 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 260

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQ+QLDEKAAYPRINDLSTAMLEDP
Sbjct: 261 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQDQLDEKAAYPRINDLSTAMLEDP 320

Query: 241 PI 243
           P+
Sbjct: 321 PV 322

[Close]

BLAST of Sed0024235 vs. ExPASy TrEMBL
Match: A0A0A0LV19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073020 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.0e-123
Identity = 234/242 (96.69%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MSLFWIVFHQFAEYEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAA 60
           MSLFWIV  QFAE EAMATSKKVITREEWEKKLND+ IRKEDMNKLVMNFLVTEGYVDAA
Sbjct: 1   MSLFWIVIRQFAENEAMATSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDAA 60

Query: 61  EKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           EKFR ESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  EKFRMESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180
           QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI
Sbjct: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQ+QLDEKAAYPRINDLSTAMLEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQDQLDEKAAYPRINDLSTAMLEDP 240

Query: 241 PI 243
           P+
Sbjct: 241 PV 242

[Close]

BLAST of Sed0024235 vs. TAIR 10
Match: AT1G61150.1 (LisH and RanBPM domains containing protein )

HSP 1 Score: 383.6 bits (984), Expect = 1.1e-106
Identity = 201/241 (83.40%), Postives = 216/241 (89.63%), Query Frame = 0


Query: 1   MSLFWIVFHQFAE-YEAMATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDA 60
           MSLF I  +Q  E  E MATSKK+ITREEWEKKLN + +RKEDMN LVMNFLVTEGYV+A
Sbjct: 1   MSLFRIFINQLEEDDEDMATSKKMITREEWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEA 60

Query: 61  AEKFRTESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQ 120
           AEKF+ ESG +PEIDLATITDRMAVKKAVQ GNVEDAIEKVNDLNPEILDTNP+LFFHLQ
Sbjct: 61  AEKFQRESGTKPEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQ 120

Query: 121 QQRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLD 180
           QQRLIELIR GK EEALEFAQEELAPRGEENQ+FLEELE+TVALL F+D S CPV++LLD
Sbjct: 121 QQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLD 180

Query: 181 ISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLED 240
           +S RLKTASEVNAAILTSQSHEKDPKLPSLLKML+WAQ QLDEKA YP INDLST  LED
Sbjct: 181 LSHRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLED 240

[Close]

BLAST of Sed0024235 vs. TAIR 10
Match: AT1G61150.2 (LisH and RanBPM domains containing protein )

HSP 1 Score: 378.6 bits (971), Expect = 3.7e-105
Identity = 193/224 (86.16%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 17  MATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGAEPEIDLA 76
           MATSKK+ITREEWEKKLN + +RKEDMN LVMNFLVTEGYV+AAEKF+ ESG +PEIDLA
Sbjct: 1   MATSKKMITREEWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEIDLA 60

Query: 77  TITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEAL 136
           TITDRMAVKKAVQ GNVEDAIEKVNDLNPEILDTNP+LFFHLQQQRLIELIR GK EEAL
Sbjct: 61  TITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEAL 120

Query: 137 EFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDISQRLKTASEVNAAILT 196
           EFAQEELAPRGEENQ+FLEELE+TVALL F+D S CPV++LLD+S RLKTASEVNAAILT
Sbjct: 121 EFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILT 180

Query: 197 SQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 241
           SQSHEKDPKLPSLLKML+WAQ QLDEKA YP INDLST  LEDP
Sbjct: 181 SQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLEDP 224

[Close]

BLAST of Sed0024235 vs. TAIR 10
Match: AT1G61150.4 (LisH and RanBPM domains containing protein )

HSP 1 Score: 378.6 bits (971), Expect = 3.7e-105
Identity = 193/224 (86.16%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 17  MATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGAEPEIDLA 76
           MATSKK+ITREEWEKKLN + +RKEDMN LVMNFLVTEGYV+AAEKF+ ESG +PEIDLA
Sbjct: 1   MATSKKMITREEWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEIDLA 60

Query: 77  TITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEAL 136
           TITDRMAVKKAVQ GNVEDAIEKVNDLNPEILDTNP+LFFHLQQQRLIELIR GK EEAL
Sbjct: 61  TITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEAL 120

Query: 137 EFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDISQRLKTASEVNAAILT 196
           EFAQEELAPRGEENQ+FLEELE+TVALL F+D S CPV++LLD+S RLKTASEVNAAILT
Sbjct: 121 EFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILT 180

Query: 197 SQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 241
           SQSHEKDPKLPSLLKML+WAQ QLDEKA YP INDLST  LEDP
Sbjct: 181 SQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLEDP 224

[Close]

BLAST of Sed0024235 vs. TAIR 10
Match: AT1G61150.6 (LisH and RanBPM domains containing protein )

HSP 1 Score: 378.6 bits (971), Expect = 3.7e-105
Identity = 193/224 (86.16%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 17  MATSKKVITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGAEPEIDLA 76
           MATSKK+ITREEWEKKLN + +RKEDMN LVMNFLVTEGYV+AAEKF+ ESG +PEIDLA
Sbjct: 1   MATSKKMITREEWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEIDLA 60

Query: 77  TITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEAL 136
           TITDRMAVKKAVQ GNVEDAIEKVNDLNPEILDTNP+LFFHLQQQRLIELIR GK EEAL
Sbjct: 61  TITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEAL 120

Query: 137 EFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDISQRLKTASEVNAAILT 196
           EFAQEELAPRGEENQ+FLEELE+TVALL F+D S CPV++LLD+S RLKTASEVNAAILT
Sbjct: 121 EFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILT 180

Query: 197 SQSHEKDPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 241
           SQSHEKDPKLPSLLKML+WAQ QLDEKA YP INDLST  LEDP
Sbjct: 181 SQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLEDP 224

[Close]

BLAST of Sed0024235 vs. TAIR 10
Match: AT1G61150.5 (LisH and RanBPM domains containing protein )

HSP 1 Score: 367.9 bits (943), Expect = 6.5e-102
Identity = 187/218 (85.78%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 23  VITREEWEKKLNDLTIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGAEPEIDLATITDRM 82
           +ITREEWEKKLN + +RKEDMN LVMNFLVTEGYV+AAEKF+ ESG +PEIDLATITDRM
Sbjct: 1   MITREEWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEIDLATITDRM 60

Query: 83  AVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEALEFAQEE 142
           AVKKAVQ GNVEDAIEKVNDLNPEILDTNP+LFFHLQQQRLIELIR GK EEALEFAQEE
Sbjct: 61  AVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEE 120

Query: 143 LAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDISQRLKTASEVNAAILTSQSHEK 202
           LAPRGEENQ+FLEELE+TVALL F+D S CPV++LLD+S RLKTASEVNAAILTSQSHEK
Sbjct: 121 LAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEK 180

Query: 203 DPKLPSLLKMLMWAQNQLDEKAAYPRINDLSTAMLEDP 241
           DPKLPSLLKML+WAQ QLDEKA YP INDLST  LEDP
Sbjct: 181 DPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLEDP 218

The following BLAST results are available for this feature:

BLAST of Sed0024235 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954757.1	1.6e-123	97.11	protein GID8 homolog [Cucurbita moschata] >XP_022954758.1 protein GID8 homolog [...	[more]
XP_004146589.1	2.1e-123	96.69	protein GID8 homolog [Cucumis sativus] >XP_008442181.1 PREDICTED: glucose-induce...	[more]
KAA0056956.1	2.1e-123	96.69	LisH domain-containing protein/CLTH domain-containing protein [Cucumis melo var....	[more]
XP_038893683.1	4.8e-123	96.28	protein GID8 homolog [Benincasa hispida] >XP_038893684.1 protein GID8 homolog [B...	[more]
XP_022140081.1	6.9e-122	95.87	glucose-induced degradation protein 8 homolog [Momordica charantia]	[more]

BLAST of Sed0024235 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WK5	1.6e-105	83.40	Protein GID8 homolog OS=Arabidopsis thaliana OX=3702 GN=GID8 PE=1 SV=1	[more]
Q54X16	3.6e-73	62.84	Glucose-induced degradation protein 8 homolog OS=Dictyostelium discoideum OX=446...	[more]
Q32L52	9.2e-61	52.75	Glucose-induced degradation protein 8 homolog OS=Bos taurus OX=9913 GN=GID8 PE=2...	[more]
Q5ZKQ7	1.2e-60	53.21	Glucose-induced degradation protein 8 homolog OS=Gallus gallus OX=9031 GN=GID8 P...	[more]
Q9D7M1	2.7e-60	52.75	Glucose-induced degradation protein 8 homolog OS=Mus musculus OX=10090 GN=Gid8 P...	[more]

BLAST of Sed0024235 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZ68	7.9e-124	97.11	protein GID8 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490172 PE=4 SV=1	[more]
A0A6J1GS04	7.9e-124	97.11	protein GID8 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456915 PE=4 SV=1	[more]
A0A1S3B548	1.0e-123	96.69	glucose-induced degradation protein 8 homolog isoform X1 OS=Cucumis melo OX=3656...	[more]
A0A5A7URR5	1.0e-123	96.69	LisH domain-containing protein/CLTH domain-containing protein OS=Cucumis melo va...	[more]
A0A0A0LV19	1.0e-123	96.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073020 PE=4 SV=1	[more]

BLAST of Sed0024235 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61150.1	1.1e-106	83.40	LisH and RanBPM domains containing protein	[more]
AT1G61150.2	3.7e-105	86.16	LisH and RanBPM domains containing protein	[more]
AT1G61150.4	3.7e-105	86.16	LisH and RanBPM domains containing protein	[more]
AT1G61150.6	3.7e-105	86.16	LisH and RanBPM domains containing protein	[more]
AT1G61150.5	6.5e-102	85.78	LisH and RanBPM domains containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 53..73
None	No IPR available	PANTHER	PTHR12864:SF61	GLUCOSE-INDUCED DEGRADATION PROTEIN 8 HOMOLOG	coord: 38..268
None	No IPR available	PANTHER	PTHR12864	RAN BINDING PROTEIN 9-RELATED	coord: 38..268
IPR013144	CRA domain	SMART	SM00757	toby_final6	coord: 157..253 e-value: 2.1E-31 score: 120.3
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 66..98 e-value: 5.3E-7 score: 39.3
IPR006594	LIS1 homology motif	PFAM	PF08513	LisH	coord: 68..94 e-value: 2.1E-8 score: 33.8
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 66..98 score: 11.017302
IPR006595	CTLH, C-terminal LisH motif	SMART	SM00668	ctlh	coord: 104..161 e-value: 9.4E-18 score: 75.0
IPR006595	CTLH, C-terminal LisH motif	PROSITE	PS50897	CTLH	coord: 104..161 score: 14.941746
IPR024964	CTLH/CRA C-terminal to LisH motif domain	PFAM	PF10607	CLTH	coord: 105..247 e-value: 2.8E-36 score: 124.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024235.1	Sed0024235.1	mRNA
Sed0024235.2	Sed0024235.2	mRNA
Sed0024235.3	Sed0024235.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding