Sed0023913 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTCTCCATGAATCTGTCCAAGATGAGCTTTGATTTGTGAGTGTTTATGATTCTGGAAGTAAGAACAACTTCAGTTGTGCTAACAGATTTTAAACAGTAGTTACTCTAATGGAAAGGATCTTTTGACTTTGTTTGCAGCTTTTCTATTTGATTATGGAAATTGTTTTGAGAACTATGATTGAATAACTTGAAAAGAAATCTAGGATTTTGGAAGCGTTATTAGCTGTCCAAAGGAGTTTCAGGCAACTTTCAGGAGAATTTTTATCCAAATTAATAGAAGTAATGTGCTGAAAAACACAGTCATCTAAATATATAGGATCGTTTTTGTTCTAAAAATGTAGAATCTGCATTTTCTTTTTATTTATTGCTTGTTTATTACTTGGGTATTGAAGAACATACTGGGCCAACCCACTGATCTTTGAAGAGGTTCCACACCCTCAAAACCAGATCAGAGAGACGCGGTTTTAGATTCTTGAATTTTTCTCTTGAGGGCACGAACATGAACCCTAAGGGTATGTTTGGGGAGCGTTTATGCAAACGTGGTTTGAGTTATCTAAGCACGGCTAGAACCTCGCAAACCCCACGGGGAAGATTGGAAGAATGTTTTATCAGATAAATGATTTTTGGTGTTTGTTGTATATATGGTTAGAGTAAGTGTAATATAACACTCTTTATTACAATAACATGTACCATAAACACCGATTCTTATAACTTTTGCATCTTAAATACTGATTATTATAATTTTTGTACTATAAATATTGTTTATAATGTTAATACAATTTGCACTTCAAACACAATTTTTCCACAACTTCTAGTATAATAATACGGGGTTAAAATACACTTTATCATAATTTACTTATAATAACTCTATTGTGTTTCAATCACATCCTAAACTTTAGAGAATATTTACAAATGTCACAAGTCCTAAACTCCATCCATAGCAATCATTGGGTAGGAAGGCCACTTCAAAAAAAACAAACAAATTGGGAACAGCCTCTTAGATTTCCTCCTACCTTTTCCACTTTAGCCAAGGAGAATTACAAGTGCATCCAAGAAAAAAAAGGGTTGTAATGTGTTGTAGTAGAATCTTGTGCCTTTTATGGTTGTGCAATGATGAATGATTTATGAGTAGCTTTTATGGAGGTTGTGCTGAAAAAACCCTAAACCAAAATGTGATAATGATGATGAGAGAGAATGTTGAATTGGTTAGTGTGAAATGATATCAATTATCTGACTATGGCTCACATGGCGATGAGACATTGCTGTGTGAGAGCAGCAGAAAGGTCCCATTTTAACCCACAGACAAATTGCAAGAGTAACTTTATGTTCTTTTGGTGCTATTCTTATTTTCCATGGCTCAGCCAACCTTTTGCTGGATCCCTCACTTCATTGCCTGTAGATGCTTATGCTTGGAGGAGATTTCAGGTAAATTTCTTTTCATTCTTCTTTCTTACATACTATACATTCAATAGTTTAGAGGGTGCAGCTAGCCTATAATGTGGTGACCACATCAAATAATTTTCAGTAAATGGGGACCCTACTCTCCTTCGTACTGTGCTCGCCTGCCCCGTAATTCACGGGGCGAGTTTGAACTATGCAGGAAGAAGAAGAAAGGAAGCGTGAGCGTCGAGAAAGGAAGAAAGAAAAGAAGGTTAGTACTATGATCTCACCATTTCGGTTTCGTCATGTCATTGAAGGAGAGGATCATATTTACGCCTTTGTTTTCCTCTTGTGTAGAAAGAGAAGGCTGTAGAAGAAGAGCCTGAAGTGGATCCCGACATTGCAGCAATGATGGGATTTGGGGGCTTTCGTTCATCCAAGAAGTGACCATTACAGATTCATCTTCTTCAACTTGAGGTTTGAGCTCTGCCCTTGTGATCCTTGTGGAGTTATTTATTATGAACTGATGCACGAGGGGTCTAAACGTGGGCTTCCCGGCCTCTAATAAGACTGTTTGTTGTATGGATTGAATATTTCAGTATGACCAACGAAGAATTGGTCAAGCTTAGCATGTCACGACCTTACTCGAACAAGATTTTTTCTGAATTTGTATAATTGTATTCTTAAGTTCTTTAGGGGGGTTTATCATGTTTTTTTATGTCATATATTTAATTCATATGCTATACCATGTTTTTTCATGTCTGTGTTCGGATCGGATCATCTTACACATGCATCGACAATTCTCACAAAACAATTGGATGAAATTGGATAATCCTATTATATGGTGAGGATTCAAAGGATCACATCTTTAACCTGTGTGTTTGGGCAGAAGCCTTTTGGAGTTATGTATGTGGTTTTTTTTTAATGGTCCCTTGTTAGGCTAAAAGATCTTCCAACTCTTCTTTGCTGTGTGTGATTCAGGGACACCCCAAAAGAGACTTTGTGGCTAAATTTTGTTTAATCTTTGTTTTGGAAGTGGTGGTTGGAATGAAACAATAGGATCTTCAACACCAAGCATCTTTTTGCATCATGATCTCATGGGATCCACCATTCAGACAAACAGAGTTGTATTTGAGTCATCATCTCCCCTTTTTTGTATTTATCACTTATCTTTTCTTTTCTCTCATTGGCATCATCTTCTATAAGATAATATGATCTTTTGTACTATTTTCACAAATCAATGAAGAAAATTATATGGTTGTCAAGAAAATTCGCA TTTTTCTCCATGAATCTGTCCAAGATGAGCTTTGATTTGTGAGTGTTTATGATTCTGGAAGTAAGAACAACTTCAGTTGTGCTAACAGATTTTAAACAGTAGTTACTCTAATGGAAAGGATCTTTTGACTTTGTTTGCAGCTTTTCTATTTGATTATGGAAATTGTTTTGAGAACTATGATTGAATAACTTGAAAAGAAATCTAGGATTTTGGAAGCGTTATTAGCTGTCCAAAGGAGTTTCAGGCAACTTTCAGGAGAATTTTTATCCAAATTAATAGAAGTAATGTGCTGAAAAACACAGTCATCTAAATATATAGGATCGTTTTTGTTCTAAAAATGTAGAATCTGCATTTTCTTTTTATTTATTGCTTGTTTATTACTTGGGTATTGAAGAACATACTGGGCCAACCCACTGATCTTTGAAGAGGTTCCACACCCTCAAAACCAGATCAGAGAGACGCGGTTTTAGATTCTTGAATTTTTCTCTTGAGGGCACGAACATGAACCCTAAGGGTATGTTTGGGGAGCGTTTATGCAAACGTGGTTTGAGTTATCTAAGCACGGCTAGAACCTCGCAAACCCCACGGGGAAGATTGGAAGAATGTTTTATCAGATAAATGATTTTTGGTGTTTGTTGTATATATGGTTAGAGTAAGTGTAATATAACACTCTTTATTACAATAACATGTACCATAAACACCGATTCTTATAACTTTTGCATCTTAAATACTGATTATTATAATTTTTGTACTATAAATATTGTTTATAATGTTAATACAATTTGCACTTCAAACACAATTTTTCCACAACTTCTAGTATAATAATACGGGGTTAAAATACACTTTATCATAATTTACTTATAATAACTCTATTGTGTTTCAATCACATCCTAAACTTTAGAGAATATTTACAAATGTCACAAGTCCTAAACTCCATCCATAGCAATCATTGGGTAGGAAGGCCACTTCAAAAAAAACAAACAAATTGGGAACAGCCTCTTAGATTTCCTCCTACCTTTTCCACTTTAGCCAAGGAGAATTACAAGTGCATCCAAGAAAAAAAAGGGTTGTAATGTGTTGTAGTAGAATCTTGTGCCTTTTATGGTTGTGCAATGATGAATGATTTATGAGTAGCTTTTATGGAGGTTGTGCTGAAAAAACCCTAAACCAAAATGTGATAATGATGATGAGAGAGAATGTTGAATTGGTTAGTGTGAAATGATATCAATTATCTGACTATGGCTCACATGGCGATGAGACATTGCTGTGTGAGAGCAGCAGAAAGGTCCCATTTTAACCCACAGACAAATTGCAAGAGTAACTTTATGTTCTTTTGGTGCTATTCTTATTTTCCATGGCTCAGCCAACCTTTTGCTGGATCCCTCACTTCATTGCCTGTAGATGCTTATGCTTGGAGGAGATTTCAGGAAGAAGAAGAAAGGAAGCGTGAGCGTCGAGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGTAGAAGAAGAGCCTGAAGTGGATCCCGACATTGCAGCAATGATGGGATTTGGGGGCTTTCGTTCATCCAAGAAGTGACCATTACAGATTCATCTTCTTCAACTTGAGGTTTGAGCTCTGCCCTTGTGATCCTTGTGGAGTTATTTATTATGAACTGATGCACGAGGGGTCTAAACGTGGGCTTCCCGGCCTCTAATAAGACTGTTTGTTGTATGGATTGAATATTTCAGTATGACCAACGAAGAATTGGTCAAGCTTAGCATGTCACGACCTTACTCGAACAAGATTTTTTCTGAATTTGTATAATTGTATTCTTAAGTTCTTTAGGGGGGTTTATCATGTTTTTTTATGTCATATATTTAATTCATATGCTATACCATGTTTTTTCATGTCTGTGTTCGGATCGGATCATCTTACACATGCATCGACAATTCTCACAAAACAATTGGATGAAATTGGATAATCCTATTATATGGGACACCCCAAAAGAGACTTTGTGGCTAAATTTTGTTTAATCTTTGTTTTGGAAGTGGTGGTTGGAATGAAACAATAGGATCTTCAACACCAAGCATCTTTTTGCATCATGATCTCATGGGATCCACCATTCAGACAAACAGAGTTGTATTTGAGTCATCATCTCCCCTTTTTTGTATTTATCACTTATCTTTTCTTTTCTCTCATTGGCATCATCTTCTATAAGATAATATGATCTTTTGTACTATTTTCACAAATCAATGAAGAAAATTATATGGTTGTCAAGAAAATTCGCA ATGGCTCACATGGCGATGAGACATTGCTGTGTGAGAGCAGCAGAAAGGTCCCATTTTAACCCACAGACAAATTGCAAGAGTAACTTTATGTTCTTTTGGTGCTATTCTTATTTTCCATGGCTCAGCCAACCTTTTGCTGGATCCCTCACTTCATTGCCTGTAGATGCTTATGCTTGGAGGAGATTTCAGGAAGAAGAAGAAAGGAAGCGTGAGCGTCGAGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGTAGAAGAAGAGCCTGAAGTGGATCCCGACATTGCAGCAATGATGGGATTTGGGGGCTTTCGTTCATCCAAGAAGTGA MAHMAMRHCCVRAAERSHFNPQTNCKSNFMFFWCYSYFPWLSQPFAGSLTSLPVDAYAWRRFQEEEERKRERRERKKEKKKEKAVEEEPEVDPDIAAMMGFGGFRSSKK Homology
BLAST of Sed0023913 vs. NCBI nr
Match: RVW39177.1 (Zinc finger matrin-type protein 2 [Vitis vinifera]) HSP 1 Score: 87.4 bits (215), Expect = 8.2e-14 Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of Sed0023913 vs. NCBI nr
Match: RVW97943.1 (Zinc finger matrin-type protein 2 [Vitis vinifera]) HSP 1 Score: 87.4 bits (215), Expect = 8.2e-14 Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of Sed0023913 vs. NCBI nr
Match: XP_002282596.2 (PREDICTED: zinc finger matrin-type protein 2 isoform X1 [Vitis vinifera] >CBI39578.3 unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 87.4 bits (215), Expect = 8.2e-14 Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of Sed0023913 vs. NCBI nr
Match: TYJ96481.1 (zinc finger matrin-type protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 85.5 bits (210), Expect = 3.1e-13 Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of Sed0023913 vs. NCBI nr
Match: XP_011648855.1 (zinc finger matrin-type protein 2 [Cucumis sativus] >XP_011648858.1 zinc finger matrin-type protein 2 [Cucumis sativus] >XP_031737170.1 zinc finger matrin-type protein 2 [Cucumis sativus] >KGN60986.1 hypothetical protein Csa_021129 [Cucumis sativus]) HSP 1 Score: 85.5 bits (210), Expect = 3.1e-13 Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of Sed0023913 vs. ExPASy TrEMBL
Match: A0A438DUK2 (Zinc finger matrin-type protein 2 OS=Vitis vinifera OX=29760 GN=Zmat2_1 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.9e-14 Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of Sed0023913 vs. ExPASy TrEMBL
Match: A0A438IMM2 (Zinc finger matrin-type protein 2 OS=Vitis vinifera OX=29760 GN=Zmat2_0 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.9e-14 Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of Sed0023913 vs. ExPASy TrEMBL
Match: D7UA14 (U1-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_14s0060g01370 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.9e-14 Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of Sed0023913 vs. ExPASy TrEMBL
Match: A0A1S3BWZ9 (zinc finger matrin-type protein 2 OS=Cucumis melo OX=3656 GN=LOC103494358 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.5e-13 Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of Sed0023913 vs. ExPASy TrEMBL
Match: A0A5D3BCY1 (Zinc finger matrin-type protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001260 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.5e-13 Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of Sed0023913 vs. TAIR 10
Match: AT3G05760.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 70.5 bits (171), Expect = 9.6e-13 Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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