Sed0023398 (gene) Chayote v1

Overview


Name	Sed0023398
Type	gene
Organism	Sechium edule (Chayote v1)
Description	squamosa promoter-binding-like protein 13A
Location	LG01: 11301901 .. 11304042 (+)
RNA-Seq Expression	Sed0023398
Synteny	Sed0023398

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGTTTTCTATTTCTCTCTCCTCTTGAATGCTTTTAAACCAGACCAACAATGACATCTTACTGATAGGTATGTTTTAGCCTACCCCTAGCCTAGCCTAGCATGTGATTGGGTAAGTGTGTGTGTTAAGTCTTAACCAACAAGCTCCTTTATTTATTTATTATTTGTTTTTAATTTTATTTTTGCCCCCTCTTCACAATCTACTTTATTGGATTTAATGGAATCTATGTCAGTGAATGAACTGGAAAGAACAAACCAATCCACTTCTGCTGCACCAGTTTGGGACACAACCCCCCTCTTATCTCTCATTCATTTCTCTCCCCTCATTTTACCCCTTTCCCATTTCCAATCTTCTTGGAAGAAAGACAAATTTACCCCTCTCCCCATTTTGAGTTGCACCCAAATGGCTTCTGGATCATCAAAGAGAGCTAGAGGAGCCAACAATGGTGGAAATCAGCCAGTTTGTTGCCTTGTGGATGGCTGCAATTCAGATCTAAGCAACTGTAGAGATTACCATAGGCGCCATAAGGTTTGTGAGCTCCATTCCAAGACTCCTCAAGTTTCCATTGCTGGCCTGAAACAGAGGTTCTGCCAACAGTGTAGCAGGTATAACTTTAATTTGTTCTCTGTCAGCTACTTTTGGTCACTACCCATTATTTTATTCTTCAAGTAAAGCTCCTAGGATTGAACATTTTTATGCTTTGTGTAAACCAATCAGCTGAGATTGAAATGGAACTTCTGAAGAAGTTTCCCCTTTTTCCCTCTGTTTTTGGGTCTTTTCATGAGAAGAAAGTTCTCTGTTCTTGGCTCTTACACCAGGTTAAAAGTTCAATCAAAGACCCAATTTTGCTGAATTTTATGAACCCATTTTAGAGTTTACTCCAAGATTGGATTTTTCTTTATCTTTTAAGTACTAGGCATTATTGAATTCTACTCTGCTTTTTTTTTTCTTTTTCCCATAGGTTTCATTCACTTGAGGAATTTGATGAAGGAAAAAGAAGCTGCCGGAAAAGACTCGACGGCCACAACCGCCGCCGGAGAAAGCCTCAAACTGATCTTTTACCTAGATCCGGTGGCCCTTTCTCTTATCATCAAGGTTAAATTTAATCCTAGAGATTTTCATAAGAAATGGAAAATTTTACATCTTTTTAGGGTATTGTTTACATAATAAAAGTCAAAATATCCCACAAATGAGACCATATAAGAGGGTACACTACTACATAAAGAAGAAAATACTGATTTTCAGGATGAAATTCTTGATCTTGAAGTTAAATTATAATACGAACAATCAAACTAGCTAAAAGTCATTTTTTTAGCTATAAATTTTCATAAGAAATGGCAAATTTTGCATCTTTTTGTTGGGTTTTTAAATGTCAATGTGTTTGTTTTTTTTTTCTTTTTTTATGAAGGTGCTCACTTGTTGCCATATACAAGCTCGCAAGTTTTCCCATCAACCACCGTGAGCAGCCACAGCTGGTCCTCCGCCGTGAGCGACGGAGGAGGAGATATCGCCGCCGTTCACTGCCGGAACCAACAGCTAAATTTCCTCGAAGAACAGAGCCTTTTTGTGGACCACAGCAACTACAAATCGGCGCAACCACTGGCTTTCTTGCACAGCGGCCCGACAACCTGTCAGCCCCTTCTCCGTTCCATCAATACACTGTCAGAAAACGGCCGCGGTGGCTGCTCCGGCGGCGGCGGAGGAGAAAGCAACAAGATGATTTTTAGTGAATCAGATTGTGCTCTCTCTCTTCTGTCATCACCACAGCCGCCGCAAGCCGCCGTTTCCCTGCTGCCGCCGTTTAGGCACCACCATAACGGTAACGGTTTTGAGCATTCTGATTGTTCTTCTGGTCGGATTCCACATGATACTCACGGCGGCGCCGTTAATTTCACCGGAATGTTTGGAATTGGCTCCGACGAGGCTGGAAATCAATCCCCTTCTACTCTTCCATTTCACTGGGAGTAGAAACCTTAAATCGAATTAAAATCGAAATTGTGGTCTGAATTTTCAGCATTTTAATTTTGTTGATTTTTATTTGATTAACAATAATTTTTATTTGCATGATCGTCATTCTATCTTGCGAGAAGACTATTTTGAATTTGCAGGTCGTCTCAATTTTTTAATATAAACTGTGACCG

mRNA sequence

CTCTGTTTTCTATTTCTCTCTCCTCTTGAATGCTTTTAAACCAGACCAACAATGACATCTTACTGATAGGTATGTTTTAGCCTACCCCTAGCCTAGCCTAGCATGTGATTGGGTAAGTGTGTGTGTTAAGTCTTAACCAACAAGCTCCTTTATTTATTTATTATTTGTTTTTAATTTTATTTTTGCCCCCTCTTCACAATCTACTTTATTGGATTTAATGGAATCTATGTCAGTGAATGAACTGGAAAGAACAAACCAATCCACTTCTGCTGCACCAGTTTGGGACACAACCCCCCTCTTATCTCTCATTCATTTCTCTCCCCTCATTTTACCCCTTTCCCATTTCCAATCTTCTTGGAAGAAAGACAAATTTACCCCTCTCCCCATTTTGAGTTGCACCCAAATGGCTTCTGGATCATCAAAGAGAGCTAGAGGAGCCAACAATGGTGGAAATCAGCCAGTTTGTTGCCTTGTGGATGGCTGCAATTCAGATCTAAGCAACTGTAGAGATTACCATAGGCGCCATAAGGTTTGTGAGCTCCATTCCAAGACTCCTCAAGTTTCCATTGCTGGCCTGAAACAGAGGTTCTGCCAACAGTGTAGCAGGTTTCATTCACTTGAGGAATTTGATGAAGGAAAAAGAAGCTGCCGGAAAAGACTCGACGGCCACAACCGCCGCCGGAGAAAGCCTCAAACTGATCTTTTACCTAGATCCGGTGGCCCTTTCTCTTATCATCAAGGTGCTCACTTGTTGCCATATACAAGCTCGCAAGTTTTCCCATCAACCACCGTGAGCAGCCACAGCTGGTCCTCCGCCGTGAGCGACGGAGGAGGAGATATCGCCGCCGTTCACTGCCGGAACCAACAGCTAAATTTCCTCGAAGAACAGAGCCTTTTTGTGGACCACAGCAACTACAAATCGGCGCAACCACTGGCTTTCTTGCACAGCGGCCCGACAACCTGTCAGCCCCTTCTCCGTTCCATCAATACACTGTCAGAAAACGGCCGCGGTGGCTGCTCCGGCGGCGGCGGAGGAGAAAGCAACAAGATGATTTTTAGTGAATCAGATTGTGCTCTCTCTCTTCTGTCATCACCACAGCCGCCGCAAGCCGCCGTTTCCCTGCTGCCGCCGTTTAGGCACCACCATAACGGTAACGGTTTTGAGCATTCTGATTGTTCTTCTGGTCGGATTCCACATGATACTCACGGCGGCGCCGTTAATTTCACCGGAATGTTTGGAATTGGCTCCGACGAGGCTGGAAATCAATCCCCTTCTACTCTTCCATTTCACTGGGAGTAGAAACCTTAAATCGAATTAAAATCGAAATTGTGGTCTGAATTTTCAGCATTTTAATTTTGTTGATTTTTATTTGATTAACAATAATTTTTATTTGCATGATCGTCATTCTATCTTGCGAGAAGACTATTTTGAATTTGCAGGTCGTCTCAATTTTTTAATATAAACTGTGACCG

Coding sequence (CDS)

ATGGAATCTATGTCAGTGAATGAACTGGAAAGAACAAACCAATCCACTTCTGCTGCACCAGTTTGGGACACAACCCCCCTCTTATCTCTCATTCATTTCTCTCCCCTCATTTTACCCCTTTCCCATTTCCAATCTTCTTGGAAGAAAGACAAATTTACCCCTCTCCCCATTTTGAGTTGCACCCAAATGGCTTCTGGATCATCAAAGAGAGCTAGAGGAGCCAACAATGGTGGAAATCAGCCAGTTTGTTGCCTTGTGGATGGCTGCAATTCAGATCTAAGCAACTGTAGAGATTACCATAGGCGCCATAAGGTTTGTGAGCTCCATTCCAAGACTCCTCAAGTTTCCATTGCTGGCCTGAAACAGAGGTTCTGCCAACAGTGTAGCAGGTTTCATTCACTTGAGGAATTTGATGAAGGAAAAAGAAGCTGCCGGAAAAGACTCGACGGCCACAACCGCCGCCGGAGAAAGCCTCAAACTGATCTTTTACCTAGATCCGGTGGCCCTTTCTCTTATCATCAAGGTGCTCACTTGTTGCCATATACAAGCTCGCAAGTTTTCCCATCAACCACCGTGAGCAGCCACAGCTGGTCCTCCGCCGTGAGCGACGGAGGAGGAGATATCGCCGCCGTTCACTGCCGGAACCAACAGCTAAATTTCCTCGAAGAACAGAGCCTTTTTGTGGACCACAGCAACTACAAATCGGCGCAACCACTGGCTTTCTTGCACAGCGGCCCGACAACCTGTCAGCCCCTTCTCCGTTCCATCAATACACTGTCAGAAAACGGCCGCGGTGGCTGCTCCGGCGGCGGCGGAGGAGAAAGCAACAAGATGATTTTTAGTGAATCAGATTGTGCTCTCTCTCTTCTGTCATCACCACAGCCGCCGCAAGCCGCCGTTTCCCTGCTGCCGCCGTTTAGGCACCACCATAACGGTAACGGTTTTGAGCATTCTGATTGTTCTTCTGGTCGGATTCCACATGATACTCACGGCGGCGCCGTTAATTTCACCGGAATGTTTGGAATTGGCTCCGACGAGGCTGGAAATCAATCCCCTTCTACTCTTCCATTTCACTGGGAGTAG

Protein sequence

MESMSVNELERTNQSTSAAPVWDTTPLLSLIHFSPLILPLSHFQSSWKKDKFTPLPILSCTQMASGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLPYTSSQVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFVDHSNYKSAQPLAFLHSGPTTCQPLLRSINTLSENGRGGCSGGGGGESNKMIFSESDCALSLLSSPQPPQAAVSLLPPFRHHHNGNGFEHSDCSSGRIPHDTHGGAVNFTGMFGIGSDEAGNQSPSTLPFHWE

Homology

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BLAST of Sed0023398 vs. NCBI nr
Match: XP_022994406.1 (squamosa promoter-binding-like protein 13A [Cucurbita maxima])

HSP 1 Score: 473.0 bits (1216), Expect = 2.3e-129
Identity = 264/411 (64.23%), Postives = 292/411 (71.05%), Query Frame = 0


Query: 1   MESMSVNELERTNQSTSAAPVWD---------TTPLLSLIHFSPL--ILPLSHFQSSWKK 60
           MESMSVNE+ERTNQ TSA  VW+         + P +  + F P+   L  S FQSSW K
Sbjct: 1   MESMSVNEVERTNQFTSATLVWEHLLSLHSAPSFPSIFTLFFPPISTFLGTSKFQSSW-K 60

Query: 61  DKFTPLPILSCTQMASGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELH 120
             F    +       SGSSKRARGANN G+QPV CLVDGCNSDLSNCRDYHRRHKVCELH
Sbjct: 61  TVFAETEVEKMASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELH 120

Query: 121 SKTPQVSIAGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGP 180
           SKTPQV+I GLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS GP
Sbjct: 121 SKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGP 180

Query: 181 FSYHQGAHLLPYTSSQVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFVD 240
           FSYHQG+HLLPYT +QV+PSTTVSSH WSS      G+ A +H R+QQLNFLE+QSLFV+
Sbjct: 181 FSYHQGSHLLPYTRAQVYPSTTVSSHGWSST-----GETAGLH-RDQQLNFLEKQSLFVE 240

Query: 241 HS----NYKSAQPLAFLHSGP-TTCQPLLRSINTLSENGRGGCSGGGGGESNKMIF---- 300
            S    NYK+AQ LAF+H GP TTCQPLLRS+NTLSENG G   GGGGGE NKMI+    
Sbjct: 241 QSHHSNNYKTAQTLAFMHGGPTTTCQPLLRSMNTLSENGGG---GGGGGERNKMIYDRFR 300

Query: 301 ---SESDCALSLLSS--------PQPPQ--------------------AAVSLLPPFRHH 360
              SESDCALSLLSS        PQP Q                    AAVSLL P  HH
Sbjct: 301 IGVSESDCALSLLSSPQAQTDHQPQPQQAESGSSGHLDLSRIEQHQRSAAVSLLQPLSHH 360

[Close]

BLAST of Sed0023398 vs. NCBI nr
Match: XP_023542691.1 (squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 462.2 bits (1188), Expect = 4.0e-126
Identity = 265/423 (62.65%), Postives = 292/423 (69.03%), Query Frame = 0


Query: 1   MESMSVNELERTNQSTSAAPVWD---------TTPLLSLIHFSPL--ILPLSHFQSSWKK 60
           MESMSVNE+ERTNQ TSA  VW+         + P +  + F P+   L  S FQSSW  
Sbjct: 1   MESMSVNEVERTNQFTSATLVWEHLLSLHSAPSFPFIFTLFFPPISTFLGTSKFQSSW-N 60

Query: 61  DKFTPLPILSCTQMASGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELH 120
             F    +       SGSSKRARGANN G+QPV CLVDGCNSDLSNCRDYHRRHKVCELH
Sbjct: 61  TVFAETEVEKMASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELH 120

Query: 121 SKTPQVSIAGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGP 180
           SKTPQV+I GLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS GP
Sbjct: 121 SKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGP 180

Query: 181 FSYHQGAHLLPYTSSQVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFV- 240
           FSYHQG+HLLPYTS+QV+PSTTVSSH WSS      G+ AA+H R+QQLNFLE+QSLFV 
Sbjct: 181 FSYHQGSHLLPYTSAQVYPSTTVSSHGWSST-----GETAALH-RDQQLNFLEKQSLFVE 240

Query: 241 --DHS-NYKSAQPLAFLHSGP-TTCQPLLRSINTLSENGRGGCSGGGGGESNKMIF---- 300
             DHS NYK+AQ LAF+H GP TTCQ LLRS+NTLSENG     GGGGGE NKMI+    
Sbjct: 241 QSDHSNNYKTAQTLAFMHGGPTTTCQHLLRSMNTLSENG----GGGGGGERNKMIYDRFR 300

Query: 301 ---SESDCALSLLSS--------------PQPPQ--------------------AAVSLL 360
              SESDCALSLLSS              PQP Q                    AAVSLL
Sbjct: 301 IGVSESDCALSLLSSPQAQTDHQPQQQPQPQPQQAESGSSGHLDLSRIEQHQRSAAVSLL 360

[Close]

BLAST of Sed0023398 vs. NCBI nr
Match: XP_022955214.1 (squamosa promoter-binding-like protein 13A [Cucurbita moschata])

HSP 1 Score: 434.5 bits (1116), Expect = 9.0e-118
Identity = 247/379 (65.17%), Postives = 269/379 (70.98%), Query Frame = 0


Query: 30  LIHFSPLI---LPLSHFQSSWKKDKFTPLPILSCTQMASGSSKRARGANNGGNQPVCCLV 89
           L+  SP I   L  S  QSSW    F    +       SGSSKRARGANN G+QPV CLV
Sbjct: 32  LLSSSPPISTFLGTSKCQSSW-NTVFAETEVEKMASSTSGSSKRARGANNAGSQPVSCLV 91

Query: 90  DGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRFCQQCSRFHSLEEFDEGKRSCRK 149
           DGCNSDLSNCRDYHRRHKVCELHSKTPQV+I GLKQRFCQQCSRFHSLEEFDEGKRSCRK
Sbjct: 92  DGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRK 151

Query: 150 RLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLPYTSSQVFPSTTVSSHSWSSAVSDGGG 209
           RLDGHNRRRRKPQTDLLPRS GPFSYHQG+HLL YTS+QV+PSTTVSSH WSS      G
Sbjct: 152 RLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLLAYTSAQVYPSTTVSSHGWSST-----G 211

Query: 210 DIAAVHCRNQQLNFLEEQSLFV---DHS-NYKSAQPLAFLHSGP-TTCQPLLRSINTLSE 269
           + AA+H R+QQLNFLE+QSLFV   DHS NYK+AQ LAF+H GP TTCQPLLRS+NTLSE
Sbjct: 212 ETAALH-RDQQLNFLEKQSLFVEQSDHSNNYKTAQTLAFMHGGPTTTCQPLLRSMNTLSE 271

Query: 270 NGRGGCSGGGGGESNKMIF-------SESDCALSLLSS------------PQPPQ----- 329
           NG G   GGGGGE NKMI+       SESDCALSLLSS            PQP Q     
Sbjct: 272 NGGG---GGGGGERNKMIYDRFRIGVSESDCALSLLSSPQAQTDHQPQQQPQPQQAESGS 331

Query: 330 ---------------AAVSLLPPFRHHHNG-NGFEHSDCSSGRIPHDTHGGAVNFTGMFG 361
                          AAVSLL P  HHH+  N +E+SD        D HGGA+NF G+FG
Sbjct: 332 SGHLDLGRIEQHQRSAAVSLLQPLNHHHHSHNSYENSD-------SDNHGGALNFPGIFG 391

[Close]

BLAST of Sed0023398 vs. NCBI nr
Match: KAG6573138.1 (Squamosa promoter-binding-like protein 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 432.6 bits (1111), Expect = 3.4e-117
Identity = 237/341 (69.50%), Postives = 257/341 (75.37%), Query Frame = 0


Query: 65  SGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRF 124
           SGSSKRARGANN G+QPV CLVDGCNSDLSNCRDYHRRHKVCELHSKTPQV+I GLKQRF
Sbjct: 6   SGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGGLKQRF 65

Query: 125 CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLPYTSS 184
           CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS GPFSYHQG+HLLPYTS+
Sbjct: 66  CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLLPYTSA 125

Query: 185 QVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFV---DHS-NYKSAQPLA 244
           QV+PSTTVSSH WSS      G+ AA+H R+QQLNFLE+QSLFV   DHS NYK+AQ LA
Sbjct: 126 QVYPSTTVSSHGWSST-----GETAALH-RDQQLNFLEKQSLFVEQSDHSNNYKTAQTLA 185

Query: 245 FLHSGP-TTCQPLLRSINTLSENGRGGCSGGGGGESNKMIF-------SESDCALSLLSS 304
           F+H GP TTCQPLLRS+NTLSENG     GGGGGE NKMI+       SESDCALSLLSS
Sbjct: 186 FMHGGPTTTCQPLLRSMNTLSENG-----GGGGGERNKMIYDRFRIGVSESDCALSLLSS 245

Query: 305 ------------PQPPQ--------------------AAVSLLPPFRHHHNG-NGFEHSD 361
                       PQP Q                    AAVSLL P  HHH+  N +E+SD
Sbjct: 246 PQAQTDHQPQQQPQPQQAESGSSGHLDLGRIEQHQRSAAVSLLQPLNHHHHSHNSYENSD 305

[Close]

BLAST of Sed0023398 vs. NCBI nr
Match: XP_038893774.1 (squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038893775.1 squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038893776.1 squamosa promoter-binding-like protein 13A [Benincasa hispida])

HSP 1 Score: 426.4 bits (1095), Expect = 2.4e-115
Identity = 225/329 (68.39%), Postives = 247/329 (75.08%), Query Frame = 0


Query: 65  SGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRF 124
           SGSSKRARG +NG  QPV CLVDGCNSDLSNCRDYHRRHKVCELHSKTPQV+I+GLKQRF
Sbjct: 6   SGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTISGLKQRF 65

Query: 125 CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLPYTSS 184
           CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTD LPRS G FSYHQG  LLP+TSS
Sbjct: 66  CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDPLPRSAGSFSYHQGPQLLPFTSS 125

Query: 185 QVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFVD------HSNYKSAQP 244
           QVFPSTTVSSH WSS VSDG  D A  H RN QLNFLE+QSLFV+      ++NYK++QP
Sbjct: 126 QVFPSTTVSSHGWSSGVSDGATDPAVHHNRNPQLNFLEKQSLFVEASDQSSNNNYKASQP 185

Query: 245 LAFLHSGPTTCQPLLRSINTLSENGRGGCSGGGGGESNKMIF-------SESDCALSLLS 304
           L FLH GPTTCQPLLR+INTL +N      G GG E NKMI+       SESDCALSLLS
Sbjct: 186 LGFLHGGPTTCQPLLRTINTLPDN------GDGGSERNKMIYDRFKIGVSESDCALSLLS 245

Query: 305 SPQPP-----------QAAVSLLPPFRHHHNGNGFEHSDCSSGRIPHDTH---------G 361
           SPQ               A+S+L P  H    N F+ SD SSG+IP+D H          
Sbjct: 246 SPQTQIQSDHQLQQQRNVAISMLHPLTH---PNTFDTSDSSSGQIPNDIHHHHPPPPPPH 305

[Close]

BLAST of Sed0023398 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.2e-49
Identity = 128/301 (42.52%), Postives = 163/301 (54.15%), Query Frame = 0


Query: 65  SGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRF 124
           S SSKR RG   G NQ   CLVDGC+SD SNCR+YH+RHKVC++HSKTP V+I G KQRF
Sbjct: 82  SSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRF 141

Query: 125 CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLPYT-S 184
           CQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R    F+  QG+ LL ++  
Sbjct: 142 CQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGG 201

Query: 185 SQVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFVDHSNYKSAQPLAFLH 244
           S VFP+T+V + SW       G  + +V       ++ + QS  V  S  K+      + 
Sbjct: 202 SHVFPTTSVLNPSW-------GNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFP-IS 261

Query: 245 SGPTTCQPLLRSINTLSENGRGGCSGGGGGESNKMIFSESDCALSLLSSPQPPQAAVSLL 304
           S P + + + +    L E      +     E       +SDCALSLLSS       + L 
Sbjct: 262 SSPNSTRSIAKQFPFLQEEESSRTA--SLCERMTSCIHDSDCALSLLSSSSSSVPHL-LQ 321

Query: 305 PPFRHHHNGNGFEHSDCSSGRIPHDTHG-GAVNFTGMFGIGSDEAGNQS---PSTLPFHW 361
           PP               S   +    +G G          GS  +GN++   P T PFHW
Sbjct: 322 PPL------------SLSQEAVETVFYGSGLFENASAVSDGSVISGNEAVRLPQTFPFHW 359

[Close]

BLAST of Sed0023398 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.2e-49
Identity = 128/301 (42.52%), Postives = 163/301 (54.15%), Query Frame = 0


Query: 65  SGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRF 124
           S SSKR RG   G NQ   CLVDGC+SD SNCR+YH+RHKVC++HSKTP V+I G KQRF
Sbjct: 82  SSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRF 141

Query: 125 CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLPYT-S 184
           CQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R    F+  QG+ LL ++  
Sbjct: 142 CQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGG 201

Query: 185 SQVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFVDHSNYKSAQPLAFLH 244
           S VFP+T+V + SW       G  + +V       ++ + QS  V  S  K+      + 
Sbjct: 202 SHVFPTTSVLNPSW-------GNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFP-IS 261

Query: 245 SGPTTCQPLLRSINTLSENGRGGCSGGGGGESNKMIFSESDCALSLLSSPQPPQAAVSLL 304
           S P + + + +    L E      +     E       +SDCALSLLSS       + L 
Sbjct: 262 SSPNSTRSIAKQFPFLQEEESSRTA--SLCERMTSCIHDSDCALSLLSSSSSSVPHL-LQ 321

Query: 305 PPFRHHHNGNGFEHSDCSSGRIPHDTHG-GAVNFTGMFGIGSDEAGNQS---PSTLPFHW 361
           PP               S   +    +G G          GS  +GN++   P T PFHW
Sbjct: 322 PPL------------SLSQEAVETVFYGSGLFENASAVSDGSVISGNEAVRLPQTFPFHW 359

[Close]

BLAST of Sed0023398 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.4e-42
Identity = 130/373 (34.85%), Postives = 167/373 (44.77%), Query Frame = 0


Query: 64  ASGSSKRARGANNGGNQPV-CCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQ 123
           +S  +KR RGA   G Q    C VDGC  DLS CRDYHRRHKVCE HSKTP V ++G + 
Sbjct: 97  SSAPAKRPRGAAAAGQQQCPSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSGREM 156

Query: 124 RFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLP-- 183
           RFCQQCSRFH L+EFDE KRSCRKRLDGHNRRRRKPQ D +  S    +  QGA   P  
Sbjct: 157 RFCQQCSRFHLLQEFDEAKRSCRKRLDGHNRRRRKPQPDPM-NSASYLASQQGARFSPFA 216

Query: 184 -------------------YTSSQVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFL 243
                              YT  Q+    +     +  + SDGG          ++  FL
Sbjct: 217 TPRPEASWTGMIKTEESPYYTHHQIPLGISSRQQHFVGSTSDGG----------RRFPFL 276

Query: 244 EEQSLFVDHSNYKSAQPL--AFLHSGPTTCQPLLRSINTLSENGRGGCSGGG-----GGE 303
           +E  +           P+  A   +  + CQPLL+++        GG SGGG     GG 
Sbjct: 277 QEGEISFGTGAGAGGVPMDQAAAAAAASVCQPLLKTVAPPPPPHGGGGSGGGKMFSDGGL 336

Query: 304 SNKMIFSESDCALSLLSSP---------------QPPQAAVSLLPPFRHHHNGNGFEHSD 361
           +  +   +SDCALSLLS+P               QP +      P       G G   S 
Sbjct: 337 TQVL---DSDCALSLLSAPANSTAIDVGGGRVVVQPTEHIPMAQPLISGLQFGGGGGSSA 396

[Close]

BLAST of Sed0023398 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.4e-36
Identity = 104/255 (40.78%), Postives = 134/255 (52.55%), Query Frame = 0


Query: 62  QMASGSSKRARGANNGGNQP---VCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIA 121
           + A+G++KR R A  GG Q      C VDGC +DL  CRDYHRRHKVCE HSKTP V +A
Sbjct: 79  EAAAGAAKRPRPAGPGGQQQQQCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVA 138

Query: 122 GLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHL 181
           G + RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQ D +  S    +  QG   
Sbjct: 139 GREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDTM-ASASFIASQQGTRF 198

Query: 182 LPYTSSQVFPS-------TTVSSHSWSSAVSDG-------------GGDIAAVHCRNQQL 241
            P+   ++  S       T  S +  +  +  G             G    A     ++ 
Sbjct: 199 SPFAHPRLEASWPPGVMKTEESPYHITHQIPLGSSSSSRQQHFVALGAATPAYAKEGRRF 258

Query: 242 NFLEEQSLFVDHSNYKSAQPLAFLHSGPTTCQPLLRSINTLSENGRGGCSGGGGGESNKM 294
            FL+E  +     ++ +   L    + P  CQPLLR+      +G GG          ++
Sbjct: 259 PFLQEGEI-----SFATGVVLEPPAAAP-ACQPLLRTGAPSESSGAGGSKMFSDQGLARV 318

[Close]

BLAST of Sed0023398 vs. ExPASy Swiss-Prot
Match: Q49I57 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.1e-36
Identity = 104/256 (40.62%), Postives = 134/256 (52.34%), Query Frame = 0


Query: 62  QMASGSSKRARGANNGGNQP----VCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSI 121
           + A+G++KR R A  GG Q       C VDGC +DL  CRDYHRRHKVCE HSKTP V +
Sbjct: 79  EAAAGAAKRPRPAGPGGQQQQQQCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVV 138

Query: 122 AGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAH 181
           AG + RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQ D +  S    +  QG  
Sbjct: 139 AGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDTM-ASASFIASQQGTR 198

Query: 182 LLPYTSSQVFPS-------TTVSSHSWSSAVSDG-------------GGDIAAVHCRNQQ 241
             P+   ++  S       T  S +  +  +  G             G    A     ++
Sbjct: 199 FSPFAHPRLEASWPPGVMKTEESPYHITHQIPLGSSSSSRQQHFVALGAATPAYAKEGRR 258

Query: 242 LNFLEEQSLFVDHSNYKSAQPLAFLHSGPTTCQPLLRSINTLSENGRGGCSGGGGGESNK 294
             FL+E  +     ++ +   L    + P  CQPLLR+      +G GG          +
Sbjct: 259 FPFLQEGEI-----SFATGVVLEPPAAAP-ACQPLLRTGAPSESSGAGGSKMFSDQGLAR 318

[Close]

BLAST of Sed0023398 vs. ExPASy TrEMBL
Match: A0A6J1JZ22 (squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111490133 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 1.1e-129
Identity = 264/411 (64.23%), Postives = 292/411 (71.05%), Query Frame = 0


Query: 1   MESMSVNELERTNQSTSAAPVWD---------TTPLLSLIHFSPL--ILPLSHFQSSWKK 60
           MESMSVNE+ERTNQ TSA  VW+         + P +  + F P+   L  S FQSSW K
Sbjct: 1   MESMSVNEVERTNQFTSATLVWEHLLSLHSAPSFPSIFTLFFPPISTFLGTSKFQSSW-K 60

Query: 61  DKFTPLPILSCTQMASGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELH 120
             F    +       SGSSKRARGANN G+QPV CLVDGCNSDLSNCRDYHRRHKVCELH
Sbjct: 61  TVFAETEVEKMASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELH 120

Query: 121 SKTPQVSIAGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGP 180
           SKTPQV+I GLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS GP
Sbjct: 121 SKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGP 180

Query: 181 FSYHQGAHLLPYTSSQVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFVD 240
           FSYHQG+HLLPYT +QV+PSTTVSSH WSS      G+ A +H R+QQLNFLE+QSLFV+
Sbjct: 181 FSYHQGSHLLPYTRAQVYPSTTVSSHGWSST-----GETAGLH-RDQQLNFLEKQSLFVE 240

Query: 241 HS----NYKSAQPLAFLHSGP-TTCQPLLRSINTLSENGRGGCSGGGGGESNKMIF---- 300
            S    NYK+AQ LAF+H GP TTCQPLLRS+NTLSENG G   GGGGGE NKMI+    
Sbjct: 241 QSHHSNNYKTAQTLAFMHGGPTTTCQPLLRSMNTLSENGGG---GGGGGERNKMIYDRFR 300

Query: 301 ---SESDCALSLLSS--------PQPPQ--------------------AAVSLLPPFRHH 360
              SESDCALSLLSS        PQP Q                    AAVSLL P  HH
Sbjct: 301 IGVSESDCALSLLSSPQAQTDHQPQPQQAESGSSGHLDLSRIEQHQRSAAVSLLQPLSHH 360

[Close]

BLAST of Sed0023398 vs. ExPASy TrEMBL
Match: A0A6J1GVH8 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111457246 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 4.3e-118
Identity = 247/379 (65.17%), Postives = 269/379 (70.98%), Query Frame = 0


Query: 30  LIHFSPLI---LPLSHFQSSWKKDKFTPLPILSCTQMASGSSKRARGANNGGNQPVCCLV 89
           L+  SP I   L  S  QSSW    F    +       SGSSKRARGANN G+QPV CLV
Sbjct: 32  LLSSSPPISTFLGTSKCQSSW-NTVFAETEVEKMASSTSGSSKRARGANNAGSQPVSCLV 91

Query: 90  DGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRFCQQCSRFHSLEEFDEGKRSCRK 149
           DGCNSDLSNCRDYHRRHKVCELHSKTPQV+I GLKQRFCQQCSRFHSLEEFDEGKRSCRK
Sbjct: 92  DGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRK 151

Query: 150 RLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLPYTSSQVFPSTTVSSHSWSSAVSDGGG 209
           RLDGHNRRRRKPQTDLLPRS GPFSYHQG+HLL YTS+QV+PSTTVSSH WSS      G
Sbjct: 152 RLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLLAYTSAQVYPSTTVSSHGWSST-----G 211

Query: 210 DIAAVHCRNQQLNFLEEQSLFV---DHS-NYKSAQPLAFLHSGP-TTCQPLLRSINTLSE 269
           + AA+H R+QQLNFLE+QSLFV   DHS NYK+AQ LAF+H GP TTCQPLLRS+NTLSE
Sbjct: 212 ETAALH-RDQQLNFLEKQSLFVEQSDHSNNYKTAQTLAFMHGGPTTTCQPLLRSMNTLSE 271

Query: 270 NGRGGCSGGGGGESNKMIF-------SESDCALSLLSS------------PQPPQ----- 329
           NG G   GGGGGE NKMI+       SESDCALSLLSS            PQP Q     
Sbjct: 272 NGGG---GGGGGERNKMIYDRFRIGVSESDCALSLLSSPQAQTDHQPQQQPQPQQAESGS 331

Query: 330 ---------------AAVSLLPPFRHHHNG-NGFEHSDCSSGRIPHDTHGGAVNFTGMFG 361
                          AAVSLL P  HHH+  N +E+SD        D HGGA+NF G+FG
Sbjct: 332 SGHLDLGRIEQHQRSAAVSLLQPLNHHHHSHNSYENSD-------SDNHGGALNFPGIFG 391

[Close]

BLAST of Sed0023398 vs. ExPASy TrEMBL
Match: A0A6J1KPQ7 (squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111495386 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 2.0e-110
Identity = 220/325 (67.69%), Postives = 241/325 (74.15%), Query Frame = 0


Query: 65  SGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRF 124
           SGSSKRARGA++G  QPV CLVDGCNSDLSNCRDYHRRHKVCELHSKTPQV+IAGL QRF
Sbjct: 6   SGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQRF 65

Query: 125 CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLPYTSS 184
           CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS G FSYHQGAHLLP+TSS
Sbjct: 66  CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHFSYHQGAHLLPFTSS 125

Query: 185 QVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFVDHSNYKSAQPLAFLHS 244
           QVFP TT+SSH WSSA     GD +  H +N +LNFLE+Q LFV+ S+YK+AQPL FLH 
Sbjct: 126 QVFPPTTLSSHGWSSA-----GDPSVFHNQNHELNFLEKQRLFVEPSSYKAAQPLGFLHG 185

Query: 245 GPTTCQPLLRSINTLSENGRGGCSGGGGGESNKMIF-------SESDCALSLLSSPQPP- 304
           GPTTC+PLLRSINTLSEN         GGE NKM++       SESDCALSLLSS Q   
Sbjct: 186 GPTTCRPLLRSINTLSEN--------SGGERNKMVYYKFRVGVSESDCALSLLSSSQQAA 245

Query: 305 --------------------QAAVSLLPPFRHHHNG-NGFEHSDCSSGRIPHDTHGGAVN 361
                                AA+SLL P  HHH+  + FE S+ SS       H GAVN
Sbjct: 246 ESGSSGHLGLSRIEQEQQQRSAAISLLQPLSHHHHKLDSFETSESSS------VH-GAVN 305

[Close]

BLAST of Sed0023398 vs. ExPASy TrEMBL
Match: A0A6J1EAD8 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111431335 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 2.6e-110
Identity = 220/326 (67.48%), Postives = 242/326 (74.23%), Query Frame = 0


Query: 65  SGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRF 124
           SGSSKRARGA++G  QPV CLVDGCNSDLSNCRDYHRRHKVCELHSKTPQV+IAGL QRF
Sbjct: 6   SGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQRF 65

Query: 125 CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLPYTSS 184
           CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS G  SYHQGAHLLP+TSS
Sbjct: 66  CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLLPFTSS 125

Query: 185 QVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFVDHSNYKSAQPLAFLHS 244
           QVFP TT+SSH WSSA     GD +  H +NQ+LNFLE+Q LFV+ S+YK+AQPL FLH 
Sbjct: 126 QVFPPTTLSSHGWSSA-----GDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 185

Query: 245 GPTTCQPLLRSINTLSENGRGGCSGGGGGESNKMIF-------SESDCALSLLSSPQPP- 304
           GPTTC+PLLRSINTLSEN         GGE NKM++       SESDCALSLLSS Q   
Sbjct: 186 GPTTCRPLLRSINTLSEN--------TGGERNKMVYYRFRVGVSESDCALSLLSSSQQAA 245

Query: 305 --------------------QAAVSLLPPFRHHHNG--NGFEHSDCSSGRIPHDTHGGAV 361
                                AA+SLL P  HHH+   + FE+S+ SS       H GAV
Sbjct: 246 DSGSSGHLGLSRIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSS------VH-GAV 305

[Close]

BLAST of Sed0023398 vs. ExPASy TrEMBL
Match: A0A0A0LWQ4 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051590 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 3.2e-97
Identity = 205/334 (61.38%), Postives = 226/334 (67.66%), Query Frame = 0


Query: 65  SGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRF 124
           SGSSKRARG +NG  QPV CLVDGCNSDLSNCRDYHRRHKVCELHSKTPQV+IAGLKQRF
Sbjct: 6   SGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLKQRF 65

Query: 125 CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS-GGPFSYHQGAHLLPYTS 184
           CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS  GPFSYHQG  LLP+TS
Sbjct: 66  CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPQLLPFTS 125

Query: 185 SQVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLE-EQSLFVDHS-------NYKS 244
           SQVFPSTTVSSH WSS  SD   D    H RN QLNF+E +QSLFV+ S       NYK+
Sbjct: 126 SQVFPSTTVSSHGWSSGGSDNATDSGVHHNRNPQLNFVEKQQSLFVETSDQTNSINNYKA 185

Query: 245 AQPLAFLHSGPTTCQPLLRSINTLSENGRGGCSGGGGGESNKMIF-------SESDCALS 304
           + PL  +H                         GGGG E NKMI+       +ESDCALS
Sbjct: 186 SPPLGLMH-------------------------GGGGSERNKMIYDRFRIGINESDCALS 245

Query: 305 LLSSP--------QPPQ---AAVSLLPPFRHHHNGNGFEHSDCSSGRIPHDTH------- 361
           LLSSP        QP Q   A++SLL P  H +  +    +  SS +I +DTH       
Sbjct: 246 LLSSPQTQIQSDHQPQQQRNASISLLHPLTHQNAFDNSSDTSSSSVQISNDTHHHHHHHP 305

[Close]

BLAST of Sed0023398 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 195.7 bits (496), Expect = 6.5e-50
Identity = 128/301 (42.52%), Postives = 163/301 (54.15%), Query Frame = 0


Query: 65  SGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRF 124
           S SSKR RG   G NQ   CLVDGC+SD SNCR+YH+RHKVC++HSKTP V+I G KQRF
Sbjct: 82  SSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRF 141

Query: 125 CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLPYT-S 184
           CQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R    F+  QG+ LL ++  
Sbjct: 142 CQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGG 201

Query: 185 SQVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFVDHSNYKSAQPLAFLH 244
           S VFP+T+V + SW       G  + +V       ++ + QS  V  S  K+      + 
Sbjct: 202 SHVFPTTSVLNPSW-------GNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFP-IS 261

Query: 245 SGPTTCQPLLRSINTLSENGRGGCSGGGGGESNKMIFSESDCALSLLSSPQPPQAAVSLL 304
           S P + + + +    L E      +     E       +SDCALSLLSS       + L 
Sbjct: 262 SSPNSTRSIAKQFPFLQEEESSRTA--SLCERMTSCIHDSDCALSLLSSSSSSVPHL-LQ 321

Query: 305 PPFRHHHNGNGFEHSDCSSGRIPHDTHG-GAVNFTGMFGIGSDEAGNQS---PSTLPFHW 361
           PP               S   +    +G G          GS  +GN++   P T PFHW
Sbjct: 322 PPL------------SLSQEAVETVFYGSGLFENASAVSDGSVISGNEAVRLPQTFPFHW 359

[Close]

BLAST of Sed0023398 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 195.7 bits (496), Expect = 6.5e-50
Identity = 128/301 (42.52%), Postives = 163/301 (54.15%), Query Frame = 0


Query: 65  SGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRF 124
           S SSKR RG   G NQ   CLVDGC+SD SNCR+YH+RHKVC++HSKTP V+I G KQRF
Sbjct: 82  SSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRF 141

Query: 125 CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLPYT-S 184
           CQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R    F+  QG+ LL ++  
Sbjct: 142 CQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGG 201

Query: 185 SQVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFVDHSNYKSAQPLAFLH 244
           S VFP+T+V + SW       G  + +V       ++ + QS  V  S  K+      + 
Sbjct: 202 SHVFPTTSVLNPSW-------GNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFP-IS 261

Query: 245 SGPTTCQPLLRSINTLSENGRGGCSGGGGGESNKMIFSESDCALSLLSSPQPPQAAVSLL 304
           S P + + + +    L E      +     E       +SDCALSLLSS       + L 
Sbjct: 262 SSPNSTRSIAKQFPFLQEEESSRTA--SLCERMTSCIHDSDCALSLLSSSSSSVPHL-LQ 321

Query: 305 PPFRHHHNGNGFEHSDCSSGRIPHDTHG-GAVNFTGMFGIGSDEAGNQS---PSTLPFHW 361
           PP               S   +    +G G          GS  +GN++   P T PFHW
Sbjct: 322 PPL------------SLSQEAVETVFYGSGLFENASAVSDGSVISGNEAVRLPQTFPFHW 359

[Close]

BLAST of Sed0023398 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 195.7 bits (496), Expect = 6.5e-50
Identity = 128/301 (42.52%), Postives = 163/301 (54.15%), Query Frame = 0


Query: 65  SGSSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRF 124
           S SSKR RG   G NQ   CLVDGC+SD SNCR+YH+RHKVC++HSKTP V+I G KQRF
Sbjct: 82  SSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRF 141

Query: 125 CQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGPFSYHQGAHLLPYT-S 184
           CQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R    F+  QG+ LL ++  
Sbjct: 142 CQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGG 201

Query: 185 SQVFPSTTVSSHSWSSAVSDGGGDIAAVHCRNQQLNFLEEQSLFVDHSNYKSAQPLAFLH 244
           S VFP+T+V + SW       G  + +V       ++ + QS  V  S  K+      + 
Sbjct: 202 SHVFPTTSVLNPSW-------GNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFP-IS 261

Query: 245 SGPTTCQPLLRSINTLSENGRGGCSGGGGGESNKMIFSESDCALSLLSSPQPPQAAVSLL 304
           S P + + + +    L E      +     E       +SDCALSLLSS       + L 
Sbjct: 262 SSPNSTRSIAKQFPFLQEEESSRTA--SLCERMTSCIHDSDCALSLLSSSSSSVPHL-LQ 321

Query: 305 PPFRHHHNGNGFEHSDCSSGRIPHDTHG-GAVNFTGMFGIGSDEAGNQS---PSTLPFHW 361
           PP               S   +    +G G          GS  +GN++   P T PFHW
Sbjct: 322 PPL------------SLSQEAVETVFYGSGLFENASAVSDGSVISGNEAVRLPQTFPFHW 359

[Close]

BLAST of Sed0023398 vs. TAIR 10
Match: AT3G60030.1 (squamosa promoter-binding protein-like 12 )

HSP 1 Score: 128.6 bits (322), Expect = 9.8e-30
Identity = 58/90 (64.44%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 77  GGNQP---VCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRFCQQCSRFHS 136
           GG  P   +CC VD C +DLS  +DYHRRHKVCE+HSK     + G+ QRFCQQCSRFH 
Sbjct: 117 GGGIPSRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHV 176

Query: 137 LEEFDEGKRSCRKRLDGHNRRRRKPQTDLL 164
           LEEFDEGKRSCR+RL GHN+RRRK   D +
Sbjct: 177 LEEFDEGKRSCRRRLAGHNKRRRKANPDTI 206

[Close]

BLAST of Sed0023398 vs. TAIR 10
Match: AT1G76580.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-29
Identity = 61/97 (62.89%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 67  SSKRARGANNGGNQPVCCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVSIAGLKQRFCQ 126
           S     G   GGN P  C VD C  DLS  +DYHRRHKVCE+HSK  +  +    QRFCQ
Sbjct: 66  SGSPGSGGGGGGNYPK-CQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQ 125

Query: 127 QCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLL 164
           QCSRFH L EFDEGKRSCR+RLDGHNRRRRK Q D +
Sbjct: 126 QCSRFHLLSEFDEGKRSCRRRLDGHNRRRRKTQPDAI 161

The following BLAST results are available for this feature:

BLAST of Sed0023398 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022994406.1	2.3e-129	64.23	squamosa promoter-binding-like protein 13A [Cucurbita maxima]	[more]
XP_023542691.1	4.0e-126	62.65	squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo]	[more]
XP_022955214.1	9.0e-118	65.17	squamosa promoter-binding-like protein 13A [Cucurbita moschata]	[more]
KAG6573138.1	3.4e-117	69.50	Squamosa promoter-binding-like protein 16, partial [Cucurbita argyrosperma subsp...	[more]
XP_038893774.1	2.4e-115	68.39	squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038893775.1 s...	[more]

BLAST of Sed0023398 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DI20	9.2e-49	42.52	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	9.2e-49	42.52	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
Q6YZE8	6.4e-42	34.85	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q49I55	2.4e-36	40.78	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]
Q49I57	3.1e-36	40.63	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1	[more]

BLAST of Sed0023398 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZ22	1.1e-129	64.23	squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GVH8	4.3e-118	65.17	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KPQ7	2.0e-110	67.69	squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1EAD8	2.6e-110	67.48	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0LWQ4	3.2e-97	61.38	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051590 PE...	[more]

BLAST of Sed0023398 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	6.5e-50	42.52	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	6.5e-50	42.52	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	6.5e-50	42.52	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT3G60030.1	9.8e-30	64.44	squamosa promoter-binding protein-like 12	[more]
AT1G76580.1	1.3e-29	62.89	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 74..145 e-value: 2.5E-35 score: 122.4
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 82..163
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 84..157 e-value: 1.1E-30 score: 105.7
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 81..158 score: 32.077293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..360
None	No IPR available	PANTHER	PTHR31251:SF144	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1	coord: 61..360
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 61..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023398.1	Sed0023398.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding