Sed0023025 (gene) Chayote v1

Overview


Name	Sed0023025
Type	gene
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S25
Location	LG01: 25179713 .. 25182037 (-)
RNA-Seq Expression	Sed0023025
Synteny	Sed0023025

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATTCTGTTGGTACTATATATACTCCCCCCTCCGACCTGAACACTTCTTCGTTCCAGCCGAAACCTCTGCTACGCCTTCTCTGAAAACCCTAGAAATCAGATTTCATGGTGAGTTACTATGAGTTTTCATTCGATGCGATTTTGACGTAGTGCTTCAACTTGCTGTGGCATTTGATTTGATATTTTCTTTGAATCATAGGCGCCGAAGAAGGAGAAAGCTCCCCCACCGTCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAACAGAAGAAGAAGGTGAGGCTTCTAACAGTGTTCAATGCTGTCTATAGGCAAGCTTTTTCTCTTTATTTTCTGAGGCATGCAATCTCTTGTTTCAAATGATTTTTTATTTGCCAAGATCTTCGATTGGAAGGCAATAAATTAGAGTCTCTGATGCGCTTCTAAATTTTCTGTAGCGTTTTCAGCGCTGTACGTTGCCGATAGTAATTTTTGGGACATGAGATTCTGGCATTTGCTTCTTATATGATGCTTTTGCATTCAGATTTTCCCACATTTTGATTTTTCATTTTTTTTACTCTTTGATCTCCAGACGTAAATTCAACAGTTTGTTTTGAAATATTTGATCATTTGTTATAGTTGGAAGAAGAATAGTAACGAATTGTATTATATTTTGGCTTTGTGGGGTTTACAATTATCTATTTTGTAATTTGAATTCATACATTGTGTAGGTTATACTTCTTCATCTTCACTGTATACAGTTAACAATATTAATTTAGGTGTTAGATTATTGGCCAAATAGAAACTGACTTTATATTTAATTATGTGATGATTGGATGATATAAACCCTATAGCGATGATTAGACTCTGGCTGAAGGTCCTAAAATGCAATGAGATGTTTGAAAATTGTGGAATAGGATAATCTGTAACCATAGCAAGCATCCTTTTGGGGTATATGTGGATGAAATGTCATCTGACTTTCTACTTGTTTTGTTATCTGACTAATTGTTATCACATGGTTTGTAGAAATGGAGCAAAGGTAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAGGCAACTTATGATAAGCTTCTTTCCGAGGCTCCCAAGTACAAGCTAATCACTCCTTCAATCCTTTCTGATAGGATGAGGGTATGACTTTTCAGCCTTTTATCCATCCATGGTTATACACTTAACTGCATTTTCCTTATTTCTAAGACTCAGAGTGTATTGTGAAAATATTACACTCAACCTTACCAAGTTTGGGATAATATCTAGACAAATGCAATGGTGATTTCCTGGTTTCTTCTTGTCAAGCCAACTGAACCCATATTTTTTAGTTTTGGTTGATAAAGCCCCATTCTAACCATTTGATTTTTTGTTTTTAAAATTAAAGTTTATATTTATTTAAATTTTCTATCTTGTGTTCCATCTATCAAATTCAAGTATGTTTCCTCAAGTAAACACTTATGTTAGTTACTTTTTTTTGTTTTCAAATTTTGGTTTAGTTATTAAAAGTATGGTAGAGTAGTTGTTGTAAGAGGCTTAGATTTAAAAAATGAAAAATTAAAAACCAAATTCAATCTACACTTTTAACCATGTAGAACTCCTGTGTGGTATTTATTATTGTGTTATCTGGCATATTCAGATCAATGGGTCACTTGCACGAAGAGCAATCAAGGATTTGATGGCACGTGGTTCAATCAGGATGATTTCTGCCCATTCCAGTCAGCAGATCTACACAAGAGCAACCAACACCTAGACGTGAAGTGATGTTTTTCCATTTTACGATTGAGTATTGTTCAATGATGAGATTAGATTTTTTGGTGTCTTAATTGCCGGATCATTTCTAAATGTGATGTGTTTTTAGTTTGTTAATGTCATTCAGGATCTCCTCAATCTCATGGCTGCTATGATATTTTTGGTTGAAATGTCATTTTGGTACTTGAGTTATTGGTAAGTCAAGATTTTTTGTAGTTATAATCATAATTGATTTTTAACTTGAGAGGCACTGGTGGGACAAGTTCCAACGGACATAACACTGGATCTATTTGGGGTTGAAGATGATCTTGTTGAGGTTTGTTACAATCTTACCTGCGAGGAATAATTGGGTTGGGAAGAGGCTTTTTCCATGGAATCTAGTTTGTGGTTTGCGTCCATGTGTTTACTTGGTCTAGCAGAGGAAGTTAAACTGGACTGATAGATAGTTGGACCAAGTCCGTTTGAGTGAATCAAGCCATCAGTTTGACTAGTCTGGTTTCGTTATGGGGTCGAACCAGTTAATCTCTCGATCCACTTTTCATCCTTAGGATTCATCTAACACATTCTATCTGTTA

mRNA sequence

GAAAATTCTGTTGGTACTATATATACTCCCCCCTCCGACCTGAACACTTCTTCGTTCCAGCCGAAACCTCTGCTACGCCTTCTCTGAAAACCCTAGAAATCAGATTTCATGGCGCCGAAGAAGGAGAAAGCTCCCCCACCGTCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAACAGAAGAAGAAGAAATGGAGCAAAGGTAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAGGCAACTTATGATAAGCTTCTTTCCGAGGCTCCCAAGTACAAGCTAATCACTCCTTCAATCCTTTCTGATAGGATGAGGATCAATGGGTCACTTGCACGAAGAGCAATCAAGGATTTGATGGCACGTGGTTCAATCAGGATGATTTCTGCCCATTCCAGTCAGCAGATCTACACAAGAGCAACCAACACCTAGACGTGAAGTGATGTTTTTCCATTTTACGATTGAGTATTGTTCAATGATGAGATTAGATTTTTTGGTGTCTTAATTGCCGGATCATTTCTAAATGTGATGTGTTTTTAGTTTGTTAATGTCATTCAGGATCTCCTCAATCTCATGGCTGCTATGATATTTTTGGTTGAAATGTCATTTTGGTACTTGAGTTATTGGTAAGTCAAGATTTTTTGTAGTTATAATCATAATTGATTTTTAACTTGAGAGGCACTGGTGGGACAAGTTCCAACGGACATAACACTGGATCTATTTGGGGTTGAAGATGATCTTGTTGAGGTTTGTTACAATCTTACCTGCGAGGAATAATTGGGTTGGGAAGAGGCTTTTTCCATGGAATCTAGTTTGTGGTTTGCGTCCATGTGTTTACTTGGTCTAGCAGAGGAAGTTAAACTGGACTGATAGATAGTTGGACCAAGTCCGTTTGAGTGAATCAAGCCATCAGTTTGACTAGTCTGGTTTCGTTATGGGGTCGAACCAGTTAATCTCTCGATCCACTTTTCATCCTTAGGATTCATCTAACACATTCTATCTGTTA

Coding sequence (CDS)

ATGGCGCCGAAGAAGGAGAAAGCTCCCCCACCGTCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAACAGAAGAAGAAGAAATGGAGCAAAGGTAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAGGCAACTTATGATAAGCTTCTTTCCGAGGCTCCCAAGTACAAGCTAATCACTCCTTCAATCCTTTCTGATAGGATGAGGATCAATGGGTCACTTGCACGAAGAGCAATCAAGGATTTGATGGCACGTGGTTCAATCAGGATGATTTCTGCCCATTCCAGTCAGCAGATCTACACAAGAGCAACCAACACCTAG

Protein sequence

MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT

Homology

[Close]

BLAST of Sed0023025 vs. NCBI nr
Match: KAB1225403.1 (40S ribosomal protein S25 [Morella rubra])

HSP 1 Score: 198.7 bits (504), Expect = 2.5e-47
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPS+LSDR+RINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  ITPSVLSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. NCBI nr
Match: XP_015901074.2 (40S ribosomal protein S25-like [Ziziphus jujuba])

HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL
Sbjct: 42  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 101

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLARRAIKDLMARGSIRMISAH+SQQIYTRATNT
Sbjct: 102 ITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 149

[Close]

BLAST of Sed0023025 vs. NCBI nr
Match: XP_040991539.1 (40S ribosomal protein S25 [Juglans microcarpa x Juglans regia] >XP_042957466.1 40S ribosomal protein S25 [Carya illinoinensis] >KAG2672406.1 hypothetical protein I3760_13G039200 [Carya illinoinensis] >KAG6630729.1 hypothetical protein CIPAW_13G039800 [Carya illinoinensis] >KAG6680403.1 hypothetical protein I3842_13G040100 [Carya illinoinensis])

HSP 1 Score: 197.2 bits (500), Expect = 7.2e-47
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDR+RI+GSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRLRISGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. NCBI nr
Match: XP_030489106.1 (40S ribosomal protein S25-2 [Cannabis sativa] >KAF4367924.1 hypothetical protein F8388_002535 [Cannabis sativa] >KAF4401252.1 hypothetical protein G4B88_014093 [Cannabis sativa])

HSP 1 Score: 196.8 bits (499), Expect = 9.5e-47
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLARRAIKDLMARG IRMISAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGLIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. NCBI nr
Match: ABK21138.1 (unknown [Picea sitchensis] >ABK21473.1 unknown [Picea sitchensis] >ABK24990.1 unknown [Picea sitchensis] >ABK25512.1 unknown [Picea sitchensis] >ABK26827.1 unknown [Picea sitchensis])

HSP 1 Score: 196.8 bits (499), Expect = 9.5e-47
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLAR+AIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARKAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. ExPASy Swiss-Prot
Match: Q9T029 (40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 9.8e-47
Identity = 98/108 (90.74%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLL+EAPK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDRMRINGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. ExPASy Swiss-Prot
Match: Q9SIK2 (40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.3e-46
Identity = 98/108 (90.74%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDRMRINGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. ExPASy Swiss-Prot
Match: P46301 (40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-46
Identity = 97/108 (89.81%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD++TYDKLLSEAPKYKL
Sbjct: 1   MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPS+LSDR+RI+GSLAR+AI+DLMARGSIRM+SAH+SQQIYTRATNT
Sbjct: 61  ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. ExPASy Swiss-Prot
Match: Q8GYL5 (40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 2.9e-46
Identity = 97/107 (90.65%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATN 108
           ITPSILSDR+RINGSLARRAI++LMA+G+IRM+SAHSSQQIYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]

BLAST of Sed0023025 vs. ExPASy Swiss-Prot
Match: Q9SIW5 (40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3)

HSP 1 Score: 178.7 bits (452), Expect = 3.5e-44
Identity = 93/106 (87.74%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKL+SEAPK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRAT 107
           ITPSILSDR+RINGSLAR+AI+DLM +G+IRM+S HSSQQI TRAT
Sbjct: 61  ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106

[Close]

BLAST of Sed0023025 vs. ExPASy TrEMBL
Match: A0A6A1WKZ3 (40S ribosomal protein S25 OS=Morella rubra OX=262757 GN=CJ030_MR1G019285 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPS+LSDR+RINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  ITPSVLSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. ExPASy TrEMBL
Match: A0A6P4BPI4 (40S ribosomal protein S25 OS=Ziziphus jujuba OX=326968 GN=LOC107434163 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.1e-47
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL
Sbjct: 42  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 101

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLARRAIKDLMARGSIRMISAH+SQQIYTRATNT
Sbjct: 102 ITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 149

[Close]

BLAST of Sed0023025 vs. ExPASy TrEMBL
Match: A0A7J6I112 (40S ribosomal protein S25 OS=Cannabis sativa OX=3483 GN=F8388_002535 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.6e-47
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLARRAIKDLMARG IRMISAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGLIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. ExPASy TrEMBL
Match: A9NKH7 (40S ribosomal protein S25 OS=Picea sitchensis OX=3332 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.6e-47
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLAR+AIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARKAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. ExPASy TrEMBL
Match: A0A803QUQ2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.6e-47
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLARRAIKDLMARG IRMISAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGLIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. TAIR 10
Match: AT4G39200.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 187.2 bits (474), Expect = 7.0e-48
Identity = 98/108 (90.74%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLL+EAPK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDRMRINGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. TAIR 10
Match: AT2G21580.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 186.8 bits (473), Expect = 9.1e-48
Identity = 98/108 (90.74%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDRMRINGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]

BLAST of Sed0023025 vs. TAIR 10
Match: AT4G34555.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 185.7 bits (470), Expect = 2.0e-47
Identity = 97/107 (90.65%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATN 108
           ITPSILSDR+RINGSLARRAI++LMA+G+IRM+SAHSSQQIYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]

BLAST of Sed0023025 vs. TAIR 10
Match: AT4G39200.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 181.4 bits (459), Expect = 3.8e-46
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKK+K PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQATYDKLL+EAPK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDRMRINGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 107

[Close]

BLAST of Sed0023025 vs. TAIR 10
Match: AT2G21580.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 181.0 bits (458), Expect = 5.0e-46
Identity = 97/108 (89.81%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
           MAPKK+K PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           ITPSILSDRMRINGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 107

The following BLAST results are available for this feature:

BLAST of Sed0023025 vs. NCBI nr


Match Name	E-value	Identity	Description
KAB1225403.1	2.5e-47	98.15	40S ribosomal protein S25 [Morella rubra]	[more]
XP_015901074.2	4.2e-47	98.15	40S ribosomal protein S25-like [Ziziphus jujuba]	[more]
XP_040991539.1	7.2e-47	98.15	40S ribosomal protein S25 [Juglans microcarpa x Juglans regia] >XP_042957466.1 4...	[more]
XP_030489106.1	9.5e-47	98.15	40S ribosomal protein S25-2 [Cannabis sativa] >KAF4367924.1 hypothetical protein...	[more]
ABK21138.1	9.5e-47	97.22	unknown [Picea sitchensis] >ABK21473.1 unknown [Picea sitchensis] >ABK24990.1 un...	[more]

BLAST of Sed0023025 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T029	9.8e-47	90.74	40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1	[more]
Q9SIK2	1.3e-46	90.74	40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1	[more]
P46301	1.7e-46	89.81	40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1	[more]
Q8GYL5	2.9e-46	90.65	40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2	[more]
Q9SIW5	3.5e-44	87.74	40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3	[more]

BLAST of Sed0023025 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A1WKZ3	1.2e-47	98.15	40S ribosomal protein S25 OS=Morella rubra OX=262757 GN=CJ030_MR1G019285 PE=3 SV...	[more]
A0A6P4BPI4	2.1e-47	98.15	40S ribosomal protein S25 OS=Ziziphus jujuba OX=326968 GN=LOC107434163 PE=3 SV=1	[more]
A0A7J6I112	4.6e-47	98.15	40S ribosomal protein S25 OS=Cannabis sativa OX=3483 GN=F8388_002535 PE=3 SV=1	[more]
A9NKH7	4.6e-47	97.22	40S ribosomal protein S25 OS=Picea sitchensis OX=3332 PE=2 SV=1	[more]
A0A803QUQ2	4.6e-47	98.15	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Sed0023025 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39200.1	7.0e-48	90.74	Ribosomal protein S25 family protein	[more]
AT2G21580.1	9.1e-48	90.74	Ribosomal protein S25 family protein	[more]
AT4G34555.1	2.0e-47	90.65	Ribosomal protein S25 family protein	[more]
AT4G39200.2	3.8e-46	89.81	Ribosomal protein S25 family protein	[more]
AT2G21580.2	5.0e-46	89.81	Ribosomal protein S25 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.63.20		coord: 21..108 e-value: 1.1E-41 score: 142.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR12850:SF31	BNAA04G12260D PROTEIN	coord: 2..108
IPR004977	Ribosomal protein S25	PFAM	PF03297	Ribosomal_S25	coord: 7..105 e-value: 5.4E-42 score: 142.1
IPR004977	Ribosomal protein S25	PANTHER	PTHR12850	40S RIBOSOMAL PROTEIN S25	coord: 2..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023025.1	Sed0023025.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome