Sed0022832 (gene) Chayote v1

Overview


Name	Sed0022832
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor ERF110-like
Location	LG01: 617671 .. 618448 (+)
RNA-Seq Expression	Sed0022832
Synteny	Sed0022832

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGTGTATTATTATTAATTAGTCCAAAGGTGGCGAATTGTAACGACGAAAGTAGAGACCAAAACGAATGGCTTCATGATTATCATCATCCGACCATGTTTTCTGATCTCAATAGAGACGCAGAAACCTCCGTCATCGTCTCCGCTCTGACCCACGTCGTCGCCGGAACTTCCTCTGCTGGTTCTTCTTCCTATAATTGTCTCAAGAGAGGCCGCCAAGAAGAGGATGATGAGCGTGAACAACAATCCAACTCTAATTCTTATCACTCTTCTGCTGACTTCACTGGTAAAATTGCTTCTTTTATTATTTTCAGTAAACAAAAGTTTGTTGAAATAGTTGAATGTAAAGTTTGTTGATGTATATTGGGAATGCAGAAGAAGGAAGAAACGAGTACGAGGAAAAGGGCGGAGTGACGATGAGTAGAAGAAAATACAGAGGAGTGAGGCAACGGCCGTGGGGGAAATGGGCGGCTGAGATTAGAGATCCCTTCAGAGCCGTTAGGGTTTGGTTAGGCACTTTCCACACCGCCGAAGCCGCCGCCGCCGCCTACGACCAAGCCGCCCTCCGCTTCCGCGGCAACAAGGCCAAACTCAACTTCCCCCAAAACGTCACTCTCCGCCCATCCTCCTCCGCCGCCCTTTCCAATAATAACAACCACCTTTTTTATCAACCAATGCTCGTGGCGTCCTCTCCCGCTGGCGATGGCAGTTTTTCGGTGCCGCAATTGGCGCCGGAGGCTAATGACTATTACTACACCTCACGCACACTGTAGAACGGC

mRNA sequence

GATGTGTATTATTATTAATTAGTCCAAAGGTGGCGAATTGTAACGACGAAAGTAGAGACCAAAACGAATGGCTTCATGATTATCATCATCCGACCATGTTTTCTGATCTCAATAGAGACGCAGAAACCTCCGTCATCGTCTCCGCTCTGACCCACGTCGTCGCCGGAACTTCCTCTGCTGGTTCTTCTTCCTATAATTGTCTCAAGAGAGGCCGCCAAGAAGAGGATGATGAGCGTGAACAACAATCCAACTCTAATTCTTATCACTCTTCTGCTGACTTCACTGAAGAAGGAAGAAACGAGTACGAGGAAAAGGGCGGAGTGACGATGAGTAGAAGAAAATACAGAGGAGTGAGGCAACGGCCGTGGGGGAAATGGGCGGCTGAGATTAGAGATCCCTTCAGAGCCGTTAGGGTTTGGTTAGGCACTTTCCACACCGCCGAAGCCGCCGCCGCCGCCTACGACCAAGCCGCCCTCCGCTTCCGCGGCAACAAGGCCAAACTCAACTTCCCCCAAAACGTCACTCTCCGCCCATCCTCCTCCGCCGCCCTTTCCAATAATAACAACCACCTTTTTTATCAACCAATGCTCGTGGCGTCCTCTCCCGCTGGCGATGGCAGTTTTTCGGTGCCGCAATTGGCGCCGGAGGCTAATGACTATTACTACACCTCACGCACACTGTAGAACGGC

Coding sequence (CDS)

ATGTTTTCTGATCTCAATAGAGACGCAGAAACCTCCGTCATCGTCTCCGCTCTGACCCACGTCGTCGCCGGAACTTCCTCTGCTGGTTCTTCTTCCTATAATTGTCTCAAGAGAGGCCGCCAAGAAGAGGATGATGAGCGTGAACAACAATCCAACTCTAATTCTTATCACTCTTCTGCTGACTTCACTGAAGAAGGAAGAAACGAGTACGAGGAAAAGGGCGGAGTGACGATGAGTAGAAGAAAATACAGAGGAGTGAGGCAACGGCCGTGGGGGAAATGGGCGGCTGAGATTAGAGATCCCTTCAGAGCCGTTAGGGTTTGGTTAGGCACTTTCCACACCGCCGAAGCCGCCGCCGCCGCCTACGACCAAGCCGCCCTCCGCTTCCGCGGCAACAAGGCCAAACTCAACTTCCCCCAAAACGTCACTCTCCGCCCATCCTCCTCCGCCGCCCTTTCCAATAATAACAACCACCTTTTTTATCAACCAATGCTCGTGGCGTCCTCTCCCGCTGGCGATGGCAGTTTTTCGGTGCCGCAATTGGCGCCGGAGGCTAATGACTATTACTACACCTCACGCACACTGTAG

Protein sequence

MFSDLNRDAETSVIVSALTHVVAGTSSAGSSSYNCLKRGRQEEDDEREQQSNSNSYHSSADFTEEGRNEYEEKGGVTMSRRKYRGVRQRPWGKWAAEIRDPFRAVRVWLGTFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPSSSAALSNNNNHLFYQPMLVASSPAGDGSFSVPQLAPEANDYYYTSRTL

Homology

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BLAST of Sed0022832 vs. NCBI nr
Match: XP_038902202.1 (ethylene-responsive transcription factor ERF110-like isoform X1 [Benincasa hispida])

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-44
Identity = 129/239 (53.97%), Postives = 146/239 (61.09%), Query Frame = 0


Query: 2   FSDLNRDAETSVIVSALTHVVA-----------GTSSAGSSSYNCLKRGRQEEDDEREQQ 61
           FS LNRD ETSVIVSALTHVVA           GT SAGSSSYN  KRGRQ   D   Q 
Sbjct: 31  FSSLNRDEETSVIVSALTHVVAGEVSPGSGSSSGTPSAGSSSYNSHKRGRQ---DHEVQH 90

Query: 62  SNSNSYHSSADFTEEGRN------EYEEKG----GVTMSRRKYRGVRQRPWGKWAAEIRD 121
           S S S++S A F E+GRN      EYE +     G    RR+YRGVRQRPWGKWAAEIRD
Sbjct: 91  SLSTSHYSPA-FNEDGRNVVTAIYEYERETKRNIGDEEGRRRYRGVRQRPWGKWAAEIRD 150

Query: 122 PFRAVRVWLGTFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPSSSAALSN------ 181
           PF+AVRVWLGTF TAEAAAAAYD+AALRFRGNKAKLNFP+NV LR S   A +N      
Sbjct: 151 PFKAVRVWLGTFDTAEAAAAAYDEAALRFRGNKAKLNFPENVRLRTSPPPATANQYVVVS 210

Query: 182 -NNNHLFYQPMLVAS--SPA----------------------GDGSFSVPQLAPEANDY 189
            +  +L+ Q  + +S  SP+                      GDG F VPQ  P+ N+Y
Sbjct: 211 ESPVNLYNQTPMSSSMTSPSSSVVGLVSPPSVYGRQWSDDHGGDGGFPVPQWTPDVNEY 265

[Close]

BLAST of Sed0022832 vs. NCBI nr
Match: XP_038902203.1 (ethylene-responsive transcription factor ERF110-like isoform X2 [Benincasa hispida])

HSP 1 Score: 184.5 bits (467), Expect = 8.8e-43
Identity = 127/239 (53.14%), Postives = 144/239 (60.25%), Query Frame = 0


Query: 2   FSDLNRDAETSVIVSALTHVVA-----------GTSSAGSSSYNCLKRGRQEEDDEREQQ 61
           FS LNRD ETSVIVSALTHVVA           GT SAGSSSYN  KRGRQ   D   Q 
Sbjct: 31  FSSLNRDEETSVIVSALTHVVAGEVSPGSGSSSGTPSAGSSSYNSHKRGRQ---DHEVQH 90

Query: 62  SNSNSYHSSADFTEEGRN------EYEEKG----GVTMSRRKYRGVRQRPWGKWAAEIRD 121
           S S S++S A    +GRN      EYE +     G    RR+YRGVRQRPWGKWAAEIRD
Sbjct: 91  SLSTSHYSPA--FNDGRNVVTAIYEYERETKRNIGDEEGRRRYRGVRQRPWGKWAAEIRD 150

Query: 122 PFRAVRVWLGTFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPSSSAALSN------ 181
           PF+AVRVWLGTF TAEAAAAAYD+AALRFRGNKAKLNFP+NV LR S   A +N      
Sbjct: 151 PFKAVRVWLGTFDTAEAAAAAYDEAALRFRGNKAKLNFPENVRLRTSPPPATANQYVVVS 210

Query: 182 -NNNHLFYQPMLVAS--SPA----------------------GDGSFSVPQLAPEANDY 189
            +  +L+ Q  + +S  SP+                      GDG F VPQ  P+ N+Y
Sbjct: 211 ESPVNLYNQTPMSSSMTSPSSSVVGLVSPPSVYGRQWSDDHGGDGGFPVPQWTPDVNEY 264

[Close]

BLAST of Sed0022832 vs. NCBI nr
Match: XP_023513200.1 (ethylene-responsive transcription factor ABR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.7 bits (452), Expect = 4.8e-41
Identity = 121/221 (54.75%), Postives = 132/221 (59.73%), Query Frame = 0


Query: 3   SDLNRDAETSVIVSALTHVVA------------GTSSAGSSSYNCLKRGRQEEDDEREQQ 62
           S L+RD ETSVIVSALTHVVA            GT SAGSSSYN  KRGRQ   D R ++
Sbjct: 31  SGLDRDIETSVIVSALTHVVAGEIPIGGESGGPGTLSAGSSSYNSHKRGRQ---DHRFEE 90

Query: 63  SNSNSYHSSADFTEEGRNEYEEKGGVTMSRRKYRGVRQRPWGKWAAEIRDPFRAVRVWLG 122
              N         E  RN  EE+G     RR+YRGVRQRPWGKWAAEIRDPF+AVRVWLG
Sbjct: 91  KGRNVVGIYEYERETRRNIREEEG-----RRRYRGVRQRPWGKWAAEIRDPFKAVRVWLG 150

Query: 123 TFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPSSSAALSNNNNHLFYQPML----- 182
           TF TAEAAA AYD+AALRFRGNKAKLNFP+NV LR S S A SN    +   PM      
Sbjct: 151 TFDTAEAAARAYDEAALRFRGNKAKLNFPENVRLRSSLSPATSNQYTMVTDSPMTSSMIS 210

Query: 183 --------VASSPA-----------GDGSFSVPQLAPEAND 188
                   + SSP+           GDG F VPQ   E ND
Sbjct: 211 SSSSSAAGLVSSPSVYGSQWGGGYGGDGGFLVPQWPQEVND 243

[Close]

BLAST of Sed0022832 vs. NCBI nr
Match: XP_022971711.1 (ethylene-responsive transcription factor ERF110-like [Cucurbita maxima])

HSP 1 Score: 177.9 bits (450), Expect = 8.2e-41
Identity = 117/222 (52.70%), Postives = 135/222 (60.81%), Query Frame = 0


Query: 2   FSDLNRDAETSVIVSALTHVVA------------GTSSAGSSSYNCLKRGRQEEDDEREQ 61
           FS L+RD ETSVIVSALTHVVA            GT SAGSSS+N  KRGRQ+   E E+
Sbjct: 30  FSGLDRDVETSVIVSALTHVVAGEIPIGGESGGSGTLSAGSSSHNSHKRGRQDHRFEEER 89

Query: 62  QSNSNSYHSSADFTEEGRNEYEEKGGVTMSRRKYRGVRQRPWGKWAAEIRDPFRAVRVWL 121
           ++    Y    ++  E R +  E+ G    RR+YRGVRQRPWGKWAAEIRDPF+AVRVWL
Sbjct: 90  RNVVGIY----EYERETRRDVREEEG----RRRYRGVRQRPWGKWAAEIRDPFKAVRVWL 149

Query: 122 GTFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPSSSAALSNNNNHLFYQPML---- 181
           GTF TAEAAA AYD+AALRFRGNKAKLNFP+NV LR S   A +N    +   PM     
Sbjct: 150 GTFDTAEAAARAYDEAALRFRGNKAKLNFPENVRLRSSPPPATANQYAVVTDSPMTSSMT 209

Query: 182 ---------VASSPA-----------GDGSFSVPQLAPEAND 188
                    + SSP+           GDG F VPQ   E ND
Sbjct: 210 SSASSSAASLVSSPSVYGSQWGSGYGGDGGFLVPQWPQEVND 243

[Close]

BLAST of Sed0022832 vs. NCBI nr
Match: KAG7011146.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 118/222 (53.15%), Postives = 129/222 (58.11%), Query Frame = 0


Query: 2   FSDLNRDAETSVIVSALTHVVA------------GTSSAGSSSYNCLKRGRQEEDDEREQ 61
           FS L+RD ETSVIVSALTHVVA            GT SAGSSSYN  KRGRQ+       
Sbjct: 30  FSGLDRDVETSVIVSALTHVVAGEIPIGGESGGTGTLSAGSSSYNSHKRGRQDH------ 89

Query: 62  QSNSNSYHSSADFTEEGRNEYEEKGGVTMSRRKYRGVRQRPWGKWAAEIRDPFRAVRVWL 121
                       F E  RN  EE+G     RR+YRGVRQRPWGKWAAEIRDPF+AVRVWL
Sbjct: 90  -----------RFEETRRNIREEEG-----RRRYRGVRQRPWGKWAAEIRDPFKAVRVWL 149

Query: 122 GTFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPSSSAALSNNNNHLFYQPML---- 181
           GTF TAEAAA AYD+AALRFRGNKAKLNFP+NV LR S   A +N    +   PM     
Sbjct: 150 GTFDTAEAAARAYDEAALRFRGNKAKLNFPENVRLRTSPPPATANQYAVVTDSPMTSSMT 209

Query: 182 ---------VASSPA-----------GDGSFSVPQLAPEAND 188
                    + SSP+           GDG F VPQ   E ND
Sbjct: 210 SSSSSSAAGLVSSPSVYGSQWGGGYGGDGGFLVPQWPQEVND 229

[Close]

BLAST of Sed0022832 vs. ExPASy Swiss-Prot
Match: Q9FGF8 (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN=ABR1 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.4e-29
Identity = 90/192 (46.88%), Postives = 109/192 (56.77%), Query Frame = 0


Query: 1   MFSDLNRDAETSVIVSALTHVVAGT--------------SSAGSSSYNCLKRGRQEEDDE 60
           + S  +R+ E S IVSALTHVVAG                ++ SSS +  KR R+ E+  
Sbjct: 63  LISGFSREMEMSAIVSALTHVVAGNVPQHQQGGGEGSGEGTSNSSSSSGQKRRREVEEGG 122

Query: 61  REQQSNSNS-----YHSSADFTEEGRN----------EYEEKGGVTMS-----------R 120
            +    +N+     Y S    T + R            YE     T S           R
Sbjct: 123 AKAVKAANTLTVDQYFSGGSSTSKVREASSNMSGPGPTYEYTTTATASSETSSFSGDQPR 182

Query: 121 RKYRGVRQRPWGKWAAEIRDPFRAVRVWLGTFHTAEAAAAAYDQAALRFRGNKAKLNFPQ 152
           R+YRGVRQRPWGKWAAEIRDPF+A RVWLGTF  AE+AA AYD+AALRFRGNKAKLNFP+
Sbjct: 183 RRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPE 242

[Close]

BLAST of Sed0022832 vs. ExPASy Swiss-Prot
Match: Q9LY29 (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 GN=ERF115 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.6e-25
Identity = 68/152 (44.74%), Postives = 92/152 (60.53%), Query Frame = 0


Query: 48  EQQSNSNSYHSSADFTEEGRN----EYEEKGGVTMSRRKYRGVRQRPWGKWAAEIRDPFR 107
           +  S+ N+ H    + ++  N      +++G   + +R YRGVRQRPWGKWAAEIRDP +
Sbjct: 55  QSSSHDNNQHQPVVYNQQDPNPPAPPTQDQG--LLRKRHYRGVRQRPWGKWAAEIRDPQK 114

Query: 108 AVRVWLGTFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPSSSAALS-----NNNNH 167
           A RVWLGTF TAEAAA AYD AAL+F+G+KAKLNFP+   L  ++S         ++NN 
Sbjct: 115 AARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLASNTSTTTGPPNYYSSNNQ 174

Query: 168 LFYQPMLVASSPAGDGSFSVPQLAPEANDYYY 191
           ++Y      S+P  +     PQ  P  N YYY
Sbjct: 175 IYY------SNPQTN-----PQTIPYFNQYYY 193

[Close]

BLAST of Sed0022832 vs. ExPASy Swiss-Prot
Match: Q70II3 (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 8.6e-25
Identity = 75/141 (53.19%), Postives = 86/141 (60.99%), Query Frame = 0


Query: 12  SVIVSALTHVVAGTSSA------GSSSYNCLKRGRQEEDDEREQQSNSNSYHSSADFTEE 71
           S +VSALT VV+  S         SSS    KRG    D      S +    S     E 
Sbjct: 2   SAMVSALTQVVSARSQTEAEGAHSSSSSAGHKRGWLGIDSAPIPSSFARVDSSHNPIEES 61

Query: 72  GRNEYEEKGGVTMSRRKYRGVRQRPWGKWAAEIRDPFRAVRVWLGTFHTAEAAAAAYDQA 131
               + E+      +R+YRGVRQRPWGKWAAEIRDP RA RVWLGTF TAEAAA AYD+A
Sbjct: 62  MSKAFPEE--AREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEA 121

Query: 132 ALRFRGNKAKLNFPQNVTLRP 147
           ALRFRGNKAKLNFP++V + P
Sbjct: 122 ALRFRGNKAKLNFPEDVRILP 140

[Close]

BLAST of Sed0022832 vs. ExPASy Swiss-Prot
Match: Q9FH54 (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.6e-23
Identity = 73/178 (41.01%), Postives = 97/178 (54.49%), Query Frame = 0


Query: 13  VIVSALTHVVAGTSSAGSSSYNCLKRGRQEEDDEREQQSNSNSYHSSADFTEEGRNEYEE 72
           V+VSALT V+    S             +  D+      N  S ++  D  ++    +++
Sbjct: 35  VMVSALTQVIGNQQS-------------KSHDNISSIDDNYPSVYNPQDPNQQVAPTHQD 94

Query: 73  KGGVTMSRRKYRGVRQRPWGKWAAEIRDPFRAVRVWLGTFHTAEAAAAAYDQAALRFRGN 132
           +G   + RR YRGVRQRPWGKWAAEIRDP +A RVWLGTF TAE+AA AYD+AAL+F+G+
Sbjct: 95  QG--DLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGS 154

Query: 133 KAKLNFPQNVTLRPSSSAALSNNNNHLFYQPMLVASSPAGDGSFSVPQLAPEANDYYY 191
           KAKLNFP+ V L  +S+   SN    +                   PQ  P  N YY+
Sbjct: 155 KAKLNFPERVQLGSNSTYYSSNQIPQM------------------EPQSIPNYNQYYH 179

[Close]

BLAST of Sed0022832 vs. ExPASy Swiss-Prot
Match: Q7G1L2 (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-23
Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 0


Query: 14  IVSALTHVVAGTSSAGSSSYNCLKRGRQEEDDEREQQSNSNSYHSSADFTEEGRNEYEEK 73
           +VS LT+VV+G +   +S+   +   R+ E+     Q       + +  T+E       +
Sbjct: 1   MVSMLTNVVSGETEPSASATWTMGHKREREEFSLPPQ----PLITGSAVTKEC------E 60

Query: 74  GGVTMSR-RKYRGVRQRPWGKWAAEIRDPFRAVRVWLGTFHTAEAAAAAYDQAALRFRGN 133
             +++ R +KYRGVRQRPWGKWAAEIRDP +A RVWLGTF TAEAAA AYD AALRFRG+
Sbjct: 61  SSMSLERPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGS 120

Query: 134 KAKLNFPQNV 143
           KAKLNFP+NV
Sbjct: 121 KAKLNFPENV 120

[Close]

BLAST of Sed0022832 vs. ExPASy TrEMBL
Match: A0A6J1I407 (ethylene-responsive transcription factor ERF110-like OS=Cucurbita maxima OX=3661 GN=LOC111470378 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 4.0e-41
Identity = 117/222 (52.70%), Postives = 135/222 (60.81%), Query Frame = 0


Query: 2   FSDLNRDAETSVIVSALTHVVA------------GTSSAGSSSYNCLKRGRQEEDDEREQ 61
           FS L+RD ETSVIVSALTHVVA            GT SAGSSS+N  KRGRQ+   E E+
Sbjct: 30  FSGLDRDVETSVIVSALTHVVAGEIPIGGESGGSGTLSAGSSSHNSHKRGRQDHRFEEER 89

Query: 62  QSNSNSYHSSADFTEEGRNEYEEKGGVTMSRRKYRGVRQRPWGKWAAEIRDPFRAVRVWL 121
           ++    Y    ++  E R +  E+ G    RR+YRGVRQRPWGKWAAEIRDPF+AVRVWL
Sbjct: 90  RNVVGIY----EYERETRRDVREEEG----RRRYRGVRQRPWGKWAAEIRDPFKAVRVWL 149

Query: 122 GTFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPSSSAALSNNNNHLFYQPML---- 181
           GTF TAEAAA AYD+AALRFRGNKAKLNFP+NV LR S   A +N    +   PM     
Sbjct: 150 GTFDTAEAAARAYDEAALRFRGNKAKLNFPENVRLRSSPPPATANQYAVVTDSPMTSSMT 209

Query: 182 ---------VASSPA-----------GDGSFSVPQLAPEAND 188
                    + SSP+           GDG F VPQ   E ND
Sbjct: 210 SSASSSAASLVSSPSVYGSQWGSGYGGDGGFLVPQWPQEVND 243

[Close]

BLAST of Sed0022832 vs. ExPASy TrEMBL
Match: A0A0A0LJY9 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297760 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 8.8e-41
Identity = 125/249 (50.20%), Postives = 144/249 (57.83%), Query Frame = 0


Query: 2   FSDLNRDAETSVIVSALTHVVAG-------------------TSSAGSSSYNCLKRGRQE 61
           FS LNR+ ETSVIVS LT VV G                   T S+ SS  N  KRGRQ+
Sbjct: 34  FSGLNREEETSVIVSTLTQVVVGDQVSPSGGNGGAGVGRTLSTGSSSSSYSNSHKRGRQQ 93

Query: 62  E--DDEREQ--QSNSNSYHSSADFTEEGRN-----EYE-----EKGGVTMSRRKYRGVRQ 121
           +  DD++     S S++ H SA F  +GRN     EYE      +GG    RR+YRGVRQ
Sbjct: 94  DLVDDQQHSLLSSVSDASHYSAAF-NDGRNVVGIYEYERETRRNRGGEEEGRRRYRGVRQ 153

Query: 122 RPWGKWAAEIRDPFRAVRVWLGTFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPSS 181
           RPWGKWAAEIRDPFRAVRVWLGTF TAEAAA AYD+AALRFRGNKAKLNFP+NV LRPS 
Sbjct: 154 RPWGKWAAEIRDPFRAVRVWLGTFDTAEAAAEAYDEAALRFRGNKAKLNFPENVRLRPSP 213

Query: 182 SAALSNNNN---------HLFYQPMLVAS------------SPA-------GDGSFSVPQ 190
           +    NN           +L+ Q  L +S            SP+       GDG FS+PQ
Sbjct: 214 APITPNNQYANVSVSPAINLYDQMSLTSSMTSPPSTTAGLVSPSSWSGGHGGDGGFSLPQ 273

[Close]

BLAST of Sed0022832 vs. ExPASy TrEMBL
Match: A0A5A7TUU0 (Ethylene-responsive transcription factor ERF110-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004440 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 2.6e-40
Identity = 123/248 (49.60%), Postives = 140/248 (56.45%), Query Frame = 0


Query: 2   FSDLNRDAETSVIVSALTHVVAG---------------------TSSAGSSSYNCLKRGR 61
           FS LNR+ ETSVIVSALT VV G                     T S+ SS  N  KRGR
Sbjct: 34  FSGLNREEETSVIVSALTQVVVGDQVSPRGGSGSGGGVGSGTLSTGSSSSSYNNSHKRGR 93

Query: 62  QEEDDEREQ----QSNSNSYHSSADFTEEGRN-----EYEEKG----GVTMSRRKYRGVR 121
           Q++ D+ +Q     S SN+ H S  F  +GRN     EYE +     G    RR+YRGVR
Sbjct: 94  QQDLDDDQQHSLLSSVSNASHYSPTF-NDGRNVVGIYEYEREARRNRGEEEGRRRYRGVR 153

Query: 122 QRPWGKWAAEIRDPFRAVRVWLGTFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPS 181
           QRPWGKWAAEIRDPFRAVRVWLGTF TAEAAA AYD+AALRFRGNKAKLNFP+NV LRPS
Sbjct: 154 QRPWGKWAAEIRDPFRAVRVWLGTFDTAEAAAEAYDEAALRFRGNKAKLNFPENVRLRPS 213

Query: 182 SS-------AALSNNNNHLFYQPMLVASS--------------------PAGDGSFSVPQ 189
            +       A +S +     Y  M + SS                      GDG FSVPQ
Sbjct: 214 PAPTTPNQYAVVSESPAINLYDQMSLTSSMTSPPSTAVGLVSPSSWSGGHGGDGGFSVPQ 273

[Close]

BLAST of Sed0022832 vs. ExPASy TrEMBL
Match: A0A1S3C6M0 (ethylene-responsive transcription factor ERF110-like OS=Cucumis melo OX=3656 GN=LOC103497485 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 2.6e-40
Identity = 123/248 (49.60%), Postives = 140/248 (56.45%), Query Frame = 0


Query: 2   FSDLNRDAETSVIVSALTHVVAG---------------------TSSAGSSSYNCLKRGR 61
           FS LNR+ ETSVIVSALT VV G                     T S+ SS  N  KRGR
Sbjct: 34  FSGLNREEETSVIVSALTQVVVGDQVSPRGGSGSGGGVGSGTLSTGSSSSSYNNSHKRGR 93

Query: 62  QEEDDEREQ----QSNSNSYHSSADFTEEGRN-----EYEEKG----GVTMSRRKYRGVR 121
           Q++ D+ +Q     S SN+ H S  F  +GRN     EYE +     G    RR+YRGVR
Sbjct: 94  QQDLDDDQQHSLLSSVSNASHYSPTF-NDGRNVVGIYEYEREARRNRGEEEGRRRYRGVR 153

Query: 122 QRPWGKWAAEIRDPFRAVRVWLGTFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPS 181
           QRPWGKWAAEIRDPFRAVRVWLGTF TAEAAA AYD+AALRFRGNKAKLNFP+NV LRPS
Sbjct: 154 QRPWGKWAAEIRDPFRAVRVWLGTFDTAEAAAEAYDEAALRFRGNKAKLNFPENVRLRPS 213

Query: 182 SS-------AALSNNNNHLFYQPMLVASS--------------------PAGDGSFSVPQ 189
            +       A +S +     Y  M + SS                      GDG FSVPQ
Sbjct: 214 PAPTTPNQYAVVSESPAINLYDQMSLTSSMTSPPSTAVGLVSPSSWSGGHGGDGGFSVPQ 273

[Close]

BLAST of Sed0022832 vs. ExPASy TrEMBL
Match: A0A6J1EJU1 (ethylene-responsive transcription factor ERF110-like OS=Cucurbita moschata OX=3662 GN=LOC111434970 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.3e-39
Identity = 118/222 (53.15%), Postives = 132/222 (59.46%), Query Frame = 0


Query: 2   FSDLNRDAETSVIVSALTHVVA------------GTSSAGSSSYNCLKRGRQEEDDEREQ 61
           FS L+RD ETSVIVSALTHVVA            GT SA SSS+N  KRGRQ+   E E 
Sbjct: 30  FSGLDRDVETSVIVSALTHVVAGEIPIGGESGKSGTLSACSSSHNSHKRGRQDHRFEEEG 89

Query: 62  QSNSNSYHSSADFTEEGRNEYEEKGGVTMSRRKYRGVRQRPWGKWAAEIRDPFRAVRVWL 121
           ++    Y       E  RN  EE+G     RR+YRGVRQRPWGKWAAEIRDPF+AVRVWL
Sbjct: 90  RNVVGIYEYE---RETRRNIREEEG-----RRRYRGVRQRPWGKWAAEIRDPFKAVRVWL 149

Query: 122 GTFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPSSSAALSNNNNHLFYQPML---- 181
           GTF TAEAAA AYD+AALRFRGNKAKLNFP+NV LR S   A +N    +   PM     
Sbjct: 150 GTFDTAEAAARAYDEAALRFRGNKAKLNFPENVRLRSSPPPATANRYAVVTDSPMTSSMT 209

Query: 182 ---------VASSPA-----------GDGSFSVPQLAPEAND 188
                    + SSP+           GDG F VPQ   E ND
Sbjct: 210 SSSSSSAAGLVSSPSVYGSQWGGGYGGDGGFLVPQWPQEVND 243

[Close]

BLAST of Sed0022832 vs. TAIR 10
Match: AT5G64750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.1e-30
Identity = 90/192 (46.88%), Postives = 109/192 (56.77%), Query Frame = 0


Query: 1   MFSDLNRDAETSVIVSALTHVVAGT--------------SSAGSSSYNCLKRGRQEEDDE 60
           + S  +R+ E S IVSALTHVVAG                ++ SSS +  KR R+ E+  
Sbjct: 63  LISGFSREMEMSAIVSALTHVVAGNVPQHQQGGGEGSGEGTSNSSSSSGQKRRREVEEGG 122

Query: 61  REQQSNSNS-----YHSSADFTEEGRN----------EYEEKGGVTMS-----------R 120
            +    +N+     Y S    T + R            YE     T S           R
Sbjct: 123 AKAVKAANTLTVDQYFSGGSSTSKVREASSNMSGPGPTYEYTTTATASSETSSFSGDQPR 182

Query: 121 RKYRGVRQRPWGKWAAEIRDPFRAVRVWLGTFHTAEAAAAAYDQAALRFRGNKAKLNFPQ 152
           R+YRGVRQRPWGKWAAEIRDPF+A RVWLGTF  AE+AA AYD+AALRFRGNKAKLNFP+
Sbjct: 183 RRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPE 242

[Close]

BLAST of Sed0022832 vs. TAIR 10
Match: AT5G07310.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 4.7e-26
Identity = 68/152 (44.74%), Postives = 92/152 (60.53%), Query Frame = 0


Query: 48  EQQSNSNSYHSSADFTEEGRN----EYEEKGGVTMSRRKYRGVRQRPWGKWAAEIRDPFR 107
           +  S+ N+ H    + ++  N      +++G   + +R YRGVRQRPWGKWAAEIRDP +
Sbjct: 55  QSSSHDNNQHQPVVYNQQDPNPPAPPTQDQG--LLRKRHYRGVRQRPWGKWAAEIRDPQK 114

Query: 108 AVRVWLGTFHTAEAAAAAYDQAALRFRGNKAKLNFPQNVTLRPSSSAALS-----NNNNH 167
           A RVWLGTF TAEAAA AYD AAL+F+G+KAKLNFP+   L  ++S         ++NN 
Sbjct: 115 AARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLASNTSTTTGPPNYYSSNNQ 174

Query: 168 LFYQPMLVASSPAGDGSFSVPQLAPEANDYYY 191
           ++Y      S+P  +     PQ  P  N YYY
Sbjct: 175 IYY------SNPQTN-----PQTIPYFNQYYY 193

[Close]

BLAST of Sed0022832 vs. TAIR 10
Match: AT5G50080.1 (ethylene response factor 110 )

HSP 1 Score: 115.2 bits (287), Expect = 6.1e-26
Identity = 75/141 (53.19%), Postives = 86/141 (60.99%), Query Frame = 0


Query: 12  SVIVSALTHVVAGTSSA------GSSSYNCLKRGRQEEDDEREQQSNSNSYHSSADFTEE 71
           S +VSALT VV+  S         SSS    KRG    D      S +    S     E 
Sbjct: 2   SAMVSALTQVVSARSQTEAEGAHSSSSSAGHKRGWLGIDSAPIPSSFARVDSSHNPIEES 61

Query: 72  GRNEYEEKGGVTMSRRKYRGVRQRPWGKWAAEIRDPFRAVRVWLGTFHTAEAAAAAYDQA 131
               + E+      +R+YRGVRQRPWGKWAAEIRDP RA RVWLGTF TAEAAA AYD+A
Sbjct: 62  MSKAFPEE--AREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEA 121

Query: 132 ALRFRGNKAKLNFPQNVTLRP 147
           ALRFRGNKAKLNFP++V + P
Sbjct: 122 ALRFRGNKAKLNFPEDVRILP 140

[Close]

BLAST of Sed0022832 vs. TAIR 10
Match: AT5G61890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-24
Identity = 73/178 (41.01%), Postives = 97/178 (54.49%), Query Frame = 0


Query: 13  VIVSALTHVVAGTSSAGSSSYNCLKRGRQEEDDEREQQSNSNSYHSSADFTEEGRNEYEE 72
           V+VSALT V+    S             +  D+      N  S ++  D  ++    +++
Sbjct: 35  VMVSALTQVIGNQQS-------------KSHDNISSIDDNYPSVYNPQDPNQQVAPTHQD 94

Query: 73  KGGVTMSRRKYRGVRQRPWGKWAAEIRDPFRAVRVWLGTFHTAEAAAAAYDQAALRFRGN 132
           +G   + RR YRGVRQRPWGKWAAEIRDP +A RVWLGTF TAE+AA AYD+AAL+F+G+
Sbjct: 95  QG--DLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGS 154

Query: 133 KAKLNFPQNVTLRPSSSAALSNNNNHLFYQPMLVASSPAGDGSFSVPQLAPEANDYYY 191
           KAKLNFP+ V L  +S+   SN    +                   PQ  P  N YY+
Sbjct: 155 KAKLNFPERVQLGSNSTYYSSNQIPQM------------------EPQSIPNYNQYYH 179

[Close]

BLAST of Sed0022832 vs. TAIR 10
Match: AT1G43160.1 (related to AP2 6 )

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-24
Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 0


Query: 14  IVSALTHVVAGTSSAGSSSYNCLKRGRQEEDDEREQQSNSNSYHSSADFTEEGRNEYEEK 73
           +VS LT+VV+G +   +S+   +   R+ E+     Q       + +  T+E       +
Sbjct: 1   MVSMLTNVVSGETEPSASATWTMGHKREREEFSLPPQ----PLITGSAVTKEC------E 60

Query: 74  GGVTMSR-RKYRGVRQRPWGKWAAEIRDPFRAVRVWLGTFHTAEAAAAAYDQAALRFRGN 133
             +++ R +KYRGVRQRPWGKWAAEIRDP +A RVWLGTF TAEAAA AYD AALRFRG+
Sbjct: 61  SSMSLERPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGS 120

Query: 134 KAKLNFPQNV 143
           KAKLNFP+NV
Sbjct: 121 KAKLNFPENV 120

The following BLAST results are available for this feature:

BLAST of Sed0022832 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902202.1	1.6e-44	53.97	ethylene-responsive transcription factor ERF110-like isoform X1 [Benincasa hispi...	[more]
XP_038902203.1	8.8e-43	53.14	ethylene-responsive transcription factor ERF110-like isoform X2 [Benincasa hispi...	[more]
XP_023513200.1	4.8e-41	54.75	ethylene-responsive transcription factor ABR1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971711.1	8.2e-41	52.70	ethylene-responsive transcription factor ERF110-like [Cucurbita maxima]	[more]
KAG7011146.1	1.1e-40	53.15	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Sed0022832 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGF8	4.4e-29	46.88	Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LY29	6.6e-25	44.74	Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q70II3	8.6e-25	53.19	Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH54	1.6e-23	41.01	Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q7G1L2	2.1e-23	51.54	Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0022832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I407	4.0e-41	52.70	ethylene-responsive transcription factor ERF110-like OS=Cucurbita maxima OX=3661...	[more]
A0A0A0LJY9	8.8e-41	50.20	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297760 PE=...	[more]
A0A5A7TUU0	2.6e-40	49.60	Ethylene-responsive transcription factor ERF110-like protein OS=Cucumis melo var...	[more]
A0A1S3C6M0	2.6e-40	49.60	ethylene-responsive transcription factor ERF110-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1EJU1	1.3e-39	53.15	ethylene-responsive transcription factor ERF110-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Sed0022832 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64750.1	3.1e-30	46.88	Integrase-type DNA-binding superfamily protein	[more]
AT5G07310.1	4.7e-26	44.74	Integrase-type DNA-binding superfamily protein	[more]
AT5G50080.1	6.1e-26	53.19	ethylene response factor 110	[more]
AT5G61890.1	1.1e-24	41.01	Integrase-type DNA-binding superfamily protein	[more]
AT1G43160.1	1.5e-24	51.54	related to AP2 6	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 83..94 score: 76.67 coord: 121..141 score: 56.02
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 82..145 e-value: 1.2E-33 score: 127.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 82..131 e-value: 5.7E-13 score: 48.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 82..139 score: 24.6581
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 82..139 e-value: 1.45722E-20 score: 78.8527
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 81..141 e-value: 1.6E-26 score: 94.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..75
None	No IPR available	PANTHER	PTHR31190:SF261	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABR1	coord: 1..161
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 1..161
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 82..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022832.1	Sed0022832.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity