Sed0022473 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCCTCAAAGATTTGTTTCTGTATTCCTCGCCATAAAAATAGCGAAAAAGCTAATGGAGGATCAGAAAAATCTTCTAAATCCAAGCGTTCCTGCCGAAAATCTCGCCATGGTGCAAAAGAAGGTAAGCATTCCTCTAGTAGTGATGGTAGTGGACATGGAAACACTGGTGATGCAAATGAAAGTAGTGCCCCCGCGGTGGCTGCTGTCGCGGTCGCGGCAGTGGCTGTGGATGCATCTGAAGATGATGGTGGCAGCGCCCATGGCCACCACAGCCATGGCGTTGAGGGAGGCAGCGGAGGTGGTGGCGGAGATTAG ATGGAGTCCTCAAAGATTTGTTTCTGTATTCCTCGCCATAAAAATAGCGAAAAAGCTAATGGAGGATCAGAAAAATCTTCTAAATCCAAGCGTTCCTGCCGAAAATCTCGCCATGGTGCAAAAGAAGGTAAGCATTCCTCTAGTAGTGATGGTAGTGGACATGGAAACACTGGTGATGCAAATGAAAGTAGTGCCCCCGCGGTGGCTGCTGTCGCGGTCGCGGCAGTGGCTGTGGATGCATCTGAAGATGATGGTGGCAGCGCCCATGGCCACCACAGCCATGGCGTTGAGGGAGGCAGCGGAGGTGGTGGCGGAGATTAG ATGGAGTCCTCAAAGATTTGTTTCTGTATTCCTCGCCATAAAAATAGCGAAAAAGCTAATGGAGGATCAGAAAAATCTTCTAAATCCAAGCGTTCCTGCCGAAAATCTCGCCATGGTGCAAAAGAAGGTAAGCATTCCTCTAGTAGTGATGGTAGTGGACATGGAAACACTGGTGATGCAAATGAAAGTAGTGCCCCCGCGGTGGCTGCTGTCGCGGTCGCGGCAGTGGCTGTGGATGCATCTGAAGATGATGGTGGCAGCGCCCATGGCCACCACAGCCATGGCGTTGAGGGAGGCAGCGGAGGTGGTGGCGGAGATTAG MESSKICFCIPRHKNSEKANGGSEKSSKSKRSCRKSRHGAKEGKHSSSSDGSGHGNTGDANESSAPAVAAVAVAAVAVDASEDDGGSAHGHHSHGVEGGSGGGGGD Homology
BLAST of Sed0022473 vs. NCBI nr
Match: KAG6605437.1 (hypothetical protein SDJN03_02754, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 120.9 bits (302), Expect = 6.5e-24 Identity = 85/109 (77.98%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Sed0022473 vs. NCBI nr
Match: KAG7035385.1 (hypothetical protein SDJN02_02181 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 120.9 bits (302), Expect = 6.5e-24 Identity = 85/109 (77.98%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Sed0022473 vs. NCBI nr
Match: TYK15390.1 (tropomyosin [Cucumis melo var. makuwa]) HSP 1 Score: 120.6 bits (301), Expect = 8.4e-24 Identity = 77/104 (74.04%), Postives = 84/104 (80.77%), Query Frame = 0
BLAST of Sed0022473 vs. NCBI nr
Match: KAA0061866.1 (tropomyosin [Cucumis melo var. makuwa]) HSP 1 Score: 120.6 bits (301), Expect = 8.4e-24 Identity = 77/104 (74.04%), Postives = 84/104 (80.77%), Query Frame = 0
BLAST of Sed0022473 vs. NCBI nr
Match: KAG7010529.1 (hypothetical protein SDJN02_27323, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 112.5 bits (280), Expect = 2.3e-21 Identity = 79/106 (74.53%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of Sed0022473 vs. ExPASy TrEMBL
Match: A0A5D3CVK1 (Tropomyosin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00300 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.1e-24 Identity = 77/104 (74.04%), Postives = 84/104 (80.77%), Query Frame = 0
BLAST of Sed0022473 vs. ExPASy TrEMBL
Match: A0A5A7V5U9 (Tropomyosin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001080 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.1e-24 Identity = 77/104 (74.04%), Postives = 84/104 (80.77%), Query Frame = 0
BLAST of Sed0022473 vs. ExPASy TrEMBL
Match: A0A0A0KFD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188150 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.2e-20 Identity = 72/102 (70.59%), Postives = 79/102 (77.45%), Query Frame = 0
BLAST of Sed0022473 vs. ExPASy TrEMBL
Match: A0A6J1D515 (circumsporozoite protein-like OS=Momordica charantia OX=3673 GN=LOC111017006 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.5e-18 Identity = 70/112 (62.50%), Postives = 77/112 (68.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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