Sed0022222 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTTGCAAAACCAAAACCTACCAGCAAAGGCCGAAGATGTCTAGACAACAGCTGAGCCTAATCTTTAGAAACCACGACCACAACGGCGACGGCCGCCTCAATGCCACCGAGCTCACAGAAGCCTTTCGTTACATTGGTGCTCTTCTGCCACCGTTGAGAGCTCGCCATGCTCTTCTATACACTGATTCTGATAGAGATGGATACATCGACGAAAAGGATTTTGAATCTCTCCTCAGATATGCCGAGAAACGAGAATATACCATCATTTGA ATGCCTTGCAAAACCAAAACCTACCAGCAAAGGCCGAAGATGTCTAGACAACAGCTGAGCCTAATCTTTAGAAACCACGACCACAACGGCGACGGCCGCCTCAATGCCACCGAGCTCACAGAAGCCTTTCGTTACATTGGTGCTCTTCTGCCACCGTTGAGAGCTCGCCATGCTCTTCTATACACTGATTCTGATAGAGATGGATACATCGACGAAAAGGATTTTGAATCTCTCCTCAGATATGCCGAGAAACGAGAATATACCATCATTTGA ATGCCTTGCAAAACCAAAACCTACCAGCAAAGGCCGAAGATGTCTAGACAACAGCTGAGCCTAATCTTTAGAAACCACGACCACAACGGCGACGGCCGCCTCAATGCCACCGAGCTCACAGAAGCCTTTCGTTACATTGGTGCTCTTCTGCCACCGTTGAGAGCTCGCCATGCTCTTCTATACACTGATTCTGATAGAGATGGATACATCGACGAAAAGGATTTTGAATCTCTCCTCAGATATGCCGAGAAACGAGAATATACCATCATTTGA MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII Homology
BLAST of Sed0022222 vs. NCBI nr
Match: KAG6600744.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144.4 bits (363), Expect = 4.6e-31 Identity = 68/90 (75.56%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of Sed0022222 vs. NCBI nr
Match: KAG6600743.1 (Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031384.1 Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 143.7 bits (361), Expect = 7.9e-31 Identity = 68/90 (75.56%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of Sed0022222 vs. NCBI nr
Match: KAG6608481.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037808.1 putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 135.6 bits (340), Expect = 2.2e-28 Identity = 66/90 (73.33%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of Sed0022222 vs. NCBI nr
Match: KAG7024248.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 134.4 bits (337), Expect = 4.8e-28 Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Sed0022222 vs. NCBI nr
Match: KAG6591370.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 131.7 bits (330), Expect = 3.1e-27 Identity = 64/88 (72.73%), Postives = 74/88 (84.09%), Query Frame = 0
BLAST of Sed0022222 vs. ExPASy Swiss-Prot
Match: Q0DJV6 (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 2.2e-07 Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0
BLAST of Sed0022222 vs. ExPASy Swiss-Prot
Match: Q6L4D4 (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 GN=CML15 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 5.9e-05 Identity = 23/68 (33.82%), Postives = 34/68 (50.00%), Query Frame = 0
BLAST of Sed0022222 vs. ExPASy Swiss-Prot
Match: Q39419 (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 5.9e-05 Identity = 21/54 (38.89%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of Sed0022222 vs. ExPASy Swiss-Prot
Match: Q9LE22 (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 7.7e-05 Identity = 22/64 (34.38%), Postives = 34/64 (53.12%), Query Frame = 0
BLAST of Sed0022222 vs. ExPASy Swiss-Prot
Match: O81701 (Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.0e-04 Identity = 21/59 (35.59%), Postives = 38/59 (64.41%), Query Frame = 0
BLAST of Sed0022222 vs. ExPASy TrEMBL
Match: A0A0A0KZR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.4e-27 Identity = 64/90 (71.11%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of Sed0022222 vs. ExPASy TrEMBL
Match: A0A5A7VDB9 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003480 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.7e-27 Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of Sed0022222 vs. ExPASy TrEMBL
Match: A5AWP8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_023174 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.8e-13 Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of Sed0022222 vs. ExPASy TrEMBL
Match: A0A438DYH7 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_081444 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 4.0e-12 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 0
BLAST of Sed0022222 vs. ExPASy TrEMBL
Match: A0A803LVB7 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.3e-10 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of Sed0022222 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 47.8 bits (112), Expect = 5.5e-06 Identity = 22/64 (34.38%), Postives = 34/64 (53.12%), Query Frame = 0
BLAST of Sed0022222 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 47.8 bits (112), Expect = 5.5e-06 Identity = 22/64 (34.38%), Postives = 34/64 (53.12%), Query Frame = 0
BLAST of Sed0022222 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family ) HSP 1 Score: 46.2 bits (108), Expect = 1.6e-05 Identity = 22/65 (33.85%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of Sed0022222 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 ) HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05 Identity = 22/70 (31.43%), Postives = 40/70 (57.14%), Query Frame = 0
BLAST of Sed0022222 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 ) HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05 Identity = 22/70 (31.43%), Postives = 40/70 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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