Sed0022222 (gene) Chayote v1

Overview


Name	Sed0022222
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Calcium-binding EF-hand family protein
Location	LG13: 14577969 .. 14578241 (-)
RNA-Seq Expression	Sed0022222
Synteny	Sed0022222

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTGCAAAACCAAAACCTACCAGCAAAGGCCGAAGATGTCTAGACAACAGCTGAGCCTAATCTTTAGAAACCACGACCACAACGGCGACGGCCGCCTCAATGCCACCGAGCTCACAGAAGCCTTTCGTTACATTGGTGCTCTTCTGCCACCGTTGAGAGCTCGCCATGCTCTTCTATACACTGATTCTGATAGAGATGGATACATCGACGAAAAGGATTTTGAATCTCTCCTCAGATATGCCGAGAAACGAGAATATACCATCATTTGA

mRNA sequence

ATGCCTTGCAAAACCAAAACCTACCAGCAAAGGCCGAAGATGTCTAGACAACAGCTGAGCCTAATCTTTAGAAACCACGACCACAACGGCGACGGCCGCCTCAATGCCACCGAGCTCACAGAAGCCTTTCGTTACATTGGTGCTCTTCTGCCACCGTTGAGAGCTCGCCATGCTCTTCTATACACTGATTCTGATAGAGATGGATACATCGACGAAAAGGATTTTGAATCTCTCCTCAGATATGCCGAGAAACGAGAATATACCATCATTTGA

Coding sequence (CDS)

ATGCCTTGCAAAACCAAAACCTACCAGCAAAGGCCGAAGATGTCTAGACAACAGCTGAGCCTAATCTTTAGAAACCACGACCACAACGGCGACGGCCGCCTCAATGCCACCGAGCTCACAGAAGCCTTTCGTTACATTGGTGCTCTTCTGCCACCGTTGAGAGCTCGCCATGCTCTTCTATACACTGATTCTGATAGAGATGGATACATCGACGAAAAGGATTTTGAATCTCTCCTCAGATATGCCGAGAAACGAGAATATACCATCATTTGA

Protein sequence

MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII

Homology

[Close]

BLAST of Sed0022222 vs. NCBI nr
Match: KAG6600744.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.4 bits (363), Expect = 4.6e-31
Identity = 68/90 (75.56%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 1  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALL 60
          MP KTKTY  RP++SR+QL LIFRNHD NGDGRL++ ELT+AF YIGALLP  RA HALL
Sbjct: 1  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALL 60

Query: 61 YTDSDRDGYIDEKDFESLLRYAEKREYTII 91
          YTDSDRDG+IDEKDFE L+ YAEKR+YT+I
Sbjct: 61 YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI 90

[Close]

BLAST of Sed0022222 vs. NCBI nr
Match: KAG6600743.1 (Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031384.1 Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.7 bits (361), Expect = 7.9e-31
Identity = 68/90 (75.56%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 1  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALL 60
          MP KTK Y QRPK+SRQQL +IFRNHD +GDGRL++ ELT+AF YIGALLP  RA HALL
Sbjct: 1  MPRKTKMYHQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALL 60

Query: 61 YTDSDRDGYIDEKDFESLLRYAEKREYTII 91
          YTDSDRDG+IDEKDFE L+ YAEKR+YT+I
Sbjct: 61 YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI 90

[Close]

BLAST of Sed0022222 vs. NCBI nr
Match: KAG6608481.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037808.1 putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 135.6 bits (340), Expect = 2.2e-28
Identity = 66/90 (73.33%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 1  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALL 60
          M  K K  Q RPK+SR+QLS+IFRNHD +GDGRL+ATELTEAFRYIGA LP  RA HAL 
Sbjct: 1  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALR 60

Query: 61 YTDSDRDGYIDEKDFESLLRYAEKREYTII 91
          YTDSDRDG+I EKDFESL+ Y EKR YTI+
Sbjct: 61 YTDSDRDGFIGEKDFESLVNYTEKRHYTIV 90

[Close]

BLAST of Sed0022222 vs. NCBI nr
Match: KAG7024248.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134.4 bits (337), Expect = 4.8e-28
Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 1  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALL 60
          M  K+KTYQ RPK+SR+QLS+IFRNHD +GDGRL+ TELT AFRYIGA LP  RA HALL
Sbjct: 1  MARKSKTYQPRPKLSREQLSVIFRNHDGDGDGRLSTTELTAAFRYIGAFLPSYRALHALL 60

Query: 61 YTDSDRDGYIDEKDFESLLRYAEKREYTII 91
          +TDSD DG+I EKDFE L+ YAEKR+YT+I
Sbjct: 61 HTDSDGDGFIGEKDFELLVNYAEKRKYTVI 90

[Close]

BLAST of Sed0022222 vs. NCBI nr
Match: KAG6591370.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 131.7 bits (330), Expect = 3.1e-27
Identity = 64/88 (72.73%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 1  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALL 60
          M  K+KTYQ RPK+SR+QLS+IFRNHD +GDGRL+ TELT AFRYIGA LP  RA HALL
Sbjct: 1  MARKSKTYQPRPKLSREQLSVIFRNHDGDGDGRLSTTELTAAFRYIGAFLPSYRALHALL 60

Query: 61 YTDSDRDGYIDEKDFESLLRYAEKREYT 89
          +TDSD DG+I EKDFE L+ YAEKR+YT
Sbjct: 61 HTDSDGDGFIGEKDFELLVNYAEKRKYT 88

[Close]

BLAST of Sed0022222 vs. ExPASy Swiss-Prot
Match: Q0DJV6 (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.2e-07
Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 14 MSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEK 73
          M   +L  +FR +D NGDG+++A EL    R +GA L P   R  +   DSDRDG++D  
Sbjct: 1  MPMAELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLS 60

Query: 74 DF 76
          +F
Sbjct: 61 EF 62

[Close]

BLAST of Sed0022222 vs. ExPASy Swiss-Prot
Match: Q6L4D4 (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 GN=CML15 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 5.9e-05
Identity = 23/68 (33.82%), Postives = 34/68 (50.00%), Query Frame = 0


Query: 11  RPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYI 70
           RP  +  +   +FR  D NGDGR++  EL   FR +G  +        +   DSD DGYI
Sbjct: 48  RPPAAEDETERVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYI 107

Query: 71  DEKDFESL 79
              +F ++
Sbjct: 108 SLGEFAAI 115

[Close]

BLAST of Sed0022222 vs. ExPASy Swiss-Prot
Match: Q39419 (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 5.9e-05
Identity = 21/54 (38.89%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 22 IFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDF 76
          IF+  D NGDG+++A EL EA + +G++ P    +H +   D+D DG+I  ++F
Sbjct: 15 IFKRFDANGDGKISAAELGEALKTLGSITPD-EVKHMMAEIDTDGDGFISFQEF 67

[Close]

BLAST of Sed0022222 vs. ExPASy Swiss-Prot
Match: Q9LE22 (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 7.7e-05
Identity = 22/64 (34.38%), Postives = 34/64 (53.12%), Query Frame = 0


Query: 17 QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFE 76
          ++L  +F   D NGDG+++  EL   F+ +G           L   D+DRDGYI+  +F 
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 77 SLLR 81
          +L R
Sbjct: 82 TLCR 85

[Close]

BLAST of Sed0022222 vs. ExPASy Swiss-Prot
Match: O81701 (Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.0e-04
Identity = 21/59 (35.59%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 22 IFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLR 81
          IF+  D NGDG+++A+EL +A + +G++ P    +H +   D+D DG+I  ++F +  R
Sbjct: 15 IFKCFDANGDGKISASELGDALKTLGSVTPD-EVKHMMAEIDTDGDGFISFQEFTNFAR 72

[Close]

BLAST of Sed0022222 vs. ExPASy TrEMBL
Match: A0A0A0KZR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.4e-27
Identity = 64/90 (71.11%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 1  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALL 60
          M  K+K Y  R K+SR+QL LIFRNHD + DGRL+ TELTEAFRYIGA LP  RARHALL
Sbjct: 1  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALL 60

Query: 61 YTDSDRDGYIDEKDFESLLRYAEKREYTII 91
          + DSDRDG+I EKDFESL+ YAE+R+YTII
Sbjct: 61 HADSDRDGFIGEKDFESLVNYAEQRQYTII 90

[Close]

BLAST of Sed0022222 vs. ExPASy TrEMBL
Match: A0A5A7VDB9 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003480 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.7e-27
Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 1  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALL 60
          M  ++KTY  R ++SR+QL LIFRNHD + DGRL+ TELTEAFRYIGA LPP RARHAL 
Sbjct: 1  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALF 60

Query: 61 YTDSDRDGYIDEKDFESLLRYAEKREYTII 91
          + DSDRDG+I EKDFE L+ YAE+R+YT+I
Sbjct: 61 HADSDRDGFISEKDFELLVNYAEQRQYTVI 90

[Close]

BLAST of Sed0022222 vs. ExPASy TrEMBL
Match: A5AWP8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_023174 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.8e-13
Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 6  KTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSD 65
          KT   +  +  QQL  IF+ HD NGDG+LN  EL +AF+++GAL+P  RA  AL + D+D
Sbjct: 7  KTIPSKSPLPEQQLKKIFKQHDTNGDGQLNKAELKQAFQHLGALIPGWRAHRALHHADTD 66

Query: 66 RDGYIDEKDFESLLRYAEKREYTI 90
           DG I EK+ + L+ YA K  YTI
Sbjct: 67 GDGCISEKEMKDLVEYAAKFGYTI 90

[Close]

BLAST of Sed0022222 vs. ExPASy TrEMBL
Match: A0A438DYH7 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_081444 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.0e-12
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 6  KTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSD 65
          KT   +  +  QQL  IF+ HD NGDG+LN  EL +AF+++GAL+P  RA  AL + D+D
Sbjct: 7  KTIPSKSPLPEQQLKKIFKQHDTNGDGQLNKAELKQAFQHLGALIPGWRAHRALHHADTD 66

Query: 66 RDGYIDEKDFESLLRYAEKREY 88
           DG I EK+ + L+ YA K  Y
Sbjct: 67 GDGCISEKEMKDLVEYAAKFGY 88

[Close]

BLAST of Sed0022222 vs. ExPASy TrEMBL
Match: A0A803LVB7 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-10
Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 3  CKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYT 62
          C  K+ +++ ++S  QL  IF+ HD NGDG L+  EL EAFR +GA +P  RA +A+ YT
Sbjct: 14 CMAKS-KKKSRLSEDQLRRIFKAHDKNGDGCLDKEELKEAFRALGARVPGYRADYAIHYT 73

Query: 63 DSDRDGYIDEKDFESLLRYAEKREYTI 90
          D D DG I+E + + L+ YA +  YT+
Sbjct: 74 DIDLDGVINENEIDHLVSYAIQFGYTL 99

[Close]

BLAST of Sed0022222 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 47.8 bits (112), Expect = 5.5e-06
Identity = 22/64 (34.38%), Postives = 34/64 (53.12%), Query Frame = 0


Query: 17 QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFE 76
          ++L  +F   D NGDG+++  EL   F+ +G           L   D+DRDGYI+  +F 
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 77 SLLR 81
          +L R
Sbjct: 82 TLCR 85

[Close]

BLAST of Sed0022222 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 47.8 bits (112), Expect = 5.5e-06
Identity = 22/64 (34.38%), Postives = 34/64 (53.12%), Query Frame = 0


Query: 17 QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFE 76
          ++L  +F   D NGDG+++  EL   F+ +G           L   D+DRDGYI+  +F 
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 77 SLLR 81
          +L R
Sbjct: 82 TLCR 85

[Close]

BLAST of Sed0022222 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family )

HSP 1 Score: 46.2 bits (108), Expect = 1.6e-05
Identity = 22/65 (33.85%), Postives = 36/65 (55.38%), Query Frame = 0


Query: 14 MSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEK 73
          M R +LS +F+  D NGDG++   EL + F+ +G ++P       +   D + DG +D  
Sbjct: 1  MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDID 60

Query: 74 DFESL 79
          +F SL
Sbjct: 61 EFGSL 65

[Close]

BLAST of Sed0022222 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 )

HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05
Identity = 22/70 (31.43%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 17  QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFE 76
           ++L  +F   D N DGR++  EL ++F  +G  L    A  A+  +D+D DG +D ++F 
Sbjct: 42  RELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFS 101

Query: 77  SLLRYAEKRE 87
            L++  ++ E
Sbjct: 102 QLIKVDDEEE 111

[Close]

BLAST of Sed0022222 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 )

HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05
Identity = 22/70 (31.43%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 17  QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFE 76
           ++L  +F   D N DGR++  EL ++F  +G  L    A  A+  +D+D DG +D ++F 
Sbjct: 42  RELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFS 101

Query: 77  SLLRYAEKRE 87
            L++  ++ E
Sbjct: 102 QLIKVDDEEE 111

The following BLAST results are available for this feature:

BLAST of Sed0022222 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600744.1	4.6e-31	75.56	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6600743.1	7.9e-31	75.56	Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
KAG6608481.1	2.2e-28	73.33	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037808.1...	[more]
KAG7024248.1	4.8e-28	72.22	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6591370.1	3.1e-27	72.73	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0022222 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0DJV6	2.2e-07	41.94	Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q6L4D4	5.9e-05	33.82	Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q39419	5.9e-05	38.89	Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1	[more]
Q9LE22	7.7e-05	34.38	Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 ...	[more]
O81701	1.0e-04	35.59	Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1	[more]

BLAST of Sed0022222 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZR6	3.4e-27	71.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1	[more]
A0A5A7VDB9	5.7e-27	67.78	Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A5AWP8	2.8e-13	48.81	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_023174 PE=4 SV=1	[more]
A0A438DYH7	4.0e-12	47.56	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_081444 PE=4 SV=1	[more]
A0A803LVB7	1.3e-10	44.83	Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	[more]

BLAST of Sed0022222 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18210.1	5.5e-06	34.38	Calcium-binding EF-hand family protein	[more]
AT1G18210.2	5.5e-06	34.38	Calcium-binding EF-hand family protein	[more]
AT4G12860.1	1.6e-05	33.85	EF hand calcium-binding protein family	[more]
AT1G76650.1	3.6e-05	31.43	calmodulin-like 38	[more]
AT1G76650.3	3.6e-05	31.43	calmodulin-like 38	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 2..88 e-value: 1.3E-11 score: 46.3
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 63..75
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 27..39
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 14..49 score: 11.472807
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 50..85 score: 8.460104
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 15..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022222.1	Sed0022222.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding