Sed0022096 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAAGAAAACCAACACAGTGGTGACATTAATGGGGATTCTCTCATGGACAACAATTTTGCCAACCTTAGTTCCACGCTCGATGGCAGCCGACGATTACAATTCACCTATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCCTTCGACCATGTCTGGATATGGTGAAGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATATAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTCTTCGTCAAATTCATGGGAAAAAGTTGCGCCAAAGCTTTTACTTTTTGGTTTGACTTTCCGGATTTGGAAGTCTTGAAACCTAATCCCATGATGGCATATAAAACTTGTGTTAGAAGACTTGATGCTCCCTCACCTTCGAAATTTTAA ATGACAAAGAAAACCAACACAGTGGTGACATTAATGGGGATTCTCTCATGGACAACAATTTTGCCAACCTTAGTTCCACGCTCGATGGCAGCCGACGATTACAATTCACCTATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCCTTCGACCATGTCTGGATATGGTGAAGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATATAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTCTTCGTCAAATTCATGGGAAAAAGTTGCGCCAAAGCTTTTACTTTTTGGTTTGACTTTCCGGATTTGGAAGTCTTGAAACCTAATCCCATGATGGCATATAAAACTTGTGTTAGAAGACTTGATGCTCCCTCACCTTCGAAATTTTAA ATGACAAAGAAAACCAACACAGTGGTGACATTAATGGGGATTCTCTCATGGACAACAATTTTGCCAACCTTAGTTCCACGCTCGATGGCAGCCGACGATTACAATTCACCTATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCCTTCGACCATGTCTGGATATGGTGAAGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATATAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTCTTCGTCAAATTCATGGGAAAAAGTTGCGCCAAAGCTTTTACTTTTTGGTTTGACTTTCCGGATTTGGAAGTCTTGAAACCTAATCCCATGATGGCATATAAAACTTGTGTTAGAAGACTTGATGCTCCCTCACCTTCGAAATTTTAA MTKKTNTVVTLMGILSWTTILPTLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAKAFTFWFDFPDLEVLKPNPMMAYKTCVRRLDAPSPSKF Homology
BLAST of Sed0022096 vs. NCBI nr
Match: KAA0046835.1 (hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa] >KAA0046840.1 hypothetical protein E6C27_scaffold216G001400 [Cucumis melo var. makuwa] >KAA0065932.1 hypothetical protein E6C27_scaffold10942G00010 [Cucumis melo var. makuwa] >TYK04499.1 hypothetical protein E5676_scaffold409G001130 [Cucumis melo var. makuwa] >TYK14838.1 hypothetical protein E5676_scaffold6575G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 189.1 bits (479), Expect = 2.4e-44 Identity = 83/120 (69.17%), Postives = 95/120 (79.17%), Query Frame = 0
BLAST of Sed0022096 vs. NCBI nr
Match: KAA0046841.1 (hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa] >TYK04493.1 hypothetical protein E5676_scaffold409G001070 [Cucumis melo var. makuwa]) HSP 1 Score: 177.9 bits (450), Expect = 5.6e-41 Identity = 87/135 (64.44%), Postives = 97/135 (71.85%), Query Frame = 0
BLAST of Sed0022096 vs. NCBI nr
Match: KAG6578867.1 (hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 175.3 bits (443), Expect = 3.6e-40 Identity = 83/122 (68.03%), Postives = 90/122 (73.77%), Query Frame = 0
BLAST of Sed0022096 vs. NCBI nr
Match: KAE8646662.1 (hypothetical protein Csa_004797, partial [Cucumis sativus]) HSP 1 Score: 156.8 bits (395), Expect = 1.3e-34 Identity = 72/112 (64.29%), Postives = 87/112 (77.68%), Query Frame = 0
BLAST of Sed0022096 vs. NCBI nr
Match: KAG6575249.1 (hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155.6 bits (392), Expect = 3.0e-34 Identity = 74/130 (56.92%), Postives = 93/130 (71.54%), Query Frame = 0
BLAST of Sed0022096 vs. ExPASy TrEMBL
Match: A0A5D3C280 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001130 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44 Identity = 83/120 (69.17%), Postives = 95/120 (79.17%), Query Frame = 0
BLAST of Sed0022096 vs. ExPASy TrEMBL
Match: A0A5A7TZR1 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001070 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.7e-41 Identity = 87/135 (64.44%), Postives = 97/135 (71.85%), Query Frame = 0
BLAST of Sed0022096 vs. ExPASy TrEMBL
Match: A0A0A0KEB8 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G054340 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 7.9e-41 Identity = 81/131 (61.83%), Postives = 96/131 (73.28%), Query Frame = 0
BLAST of Sed0022096 vs. ExPASy TrEMBL
Match: A0A0A0KQ41 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G381840 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.6e-33 Identity = 70/124 (56.45%), Postives = 87/124 (70.16%), Query Frame = 0
BLAST of Sed0022096 vs. ExPASy TrEMBL
Match: A0A0A0L535 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008300 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.6e-25 Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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