Sed0021808 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCAAATAATCACATGATCTTATCATTCGACCATCAATTTCATTATAAATTAATTTCCTTCTAATTTTTCCTCAACCCACCAAAAGATTTCCACTCTGTTTTTCAAATCTTTTGTAATTTTGTCCAATTCGTTCGATTTTTCCACTGATTTTTCATGGGGAATTACATTTCTTGTACGCTTTCGACTCCAATTAGCGGCAGAGGTTCGAATTCTTCGACGACTGCGACGGTGATCTTTCCGAGCGGCGAGATTCGGAAATTTCACGAACCGGTAAACGCGGCGGAGCTGATGTTGGAGATGCCCAATTTCTTCGTTGCAAATTCTCAATCGGTTCATGTTGGCCGGAGATTTTCGGCTCTGACGGCGGACGAGGATCTGGAAATGGGGAATTCGTACGTCATGTTTCCGATGAAGAAGGTGAATTCCGTGGTGTCGGCGGCGGATATGGGGGCGTTGTTCCTCGCCGCCGAGCGGGTCGCCGGCGGGAAGAGGCGGCGGATCGTCGGCGGTGGGGAATCGGATGTTGGTGTTTGGCCGGCGGTGGAAGCCGAGGAGAAGTTGAAATTGGATGTGGAGGAGTTTTCGGCGGCGCCGGAGTTGGCTCATCGGCGGTCGATGTGTAGGTCGAGGAAGCCGTTGTTGGAAACTATAGTTGAAGAGCCGATATGTTTAAGATAATTTTGGGGAAAGTGGAGAATTGGGGGATTAATTTGAAAGTATTTGAATTGTTTTTTTTTTGTTTGGATTTGGGGGTTTTTCTTTTTGATAATTAGTAAAAGGAAAACCTATTGGTTCATTGATTAGGATCATGGAAAGATTAGTTGATTGATGTTAGACTTTTGGAATTTTTCTATTCTGTTTGAAGAATGGCAAGATTTGTATAGTTATGTCTAATACTTCACTCTATATAATTTTTTTGTTAATTGTGTAAATATGTATGATACTTCGCCCAATATTAAAC TTTTCAAATAATCACATGATCTTATCATTCGACCATCAATTTCATTATAAATTAATTTCCTTCTAATTTTTCCTCAACCCACCAAAAGATTTCCACTCTGTTTTTCAAATCTTTTGTAATTTTGTCCAATTCGTTCGATTTTTCCACTGATTTTTCATGGGGAATTACATTTCTTGTACGCTTTCGACTCCAATTAGCGGCAGAGGTTCGAATTCTTCGACGACTGCGACGGTGATCTTTCCGAGCGGCGAGATTCGGAAATTTCACGAACCGGTAAACGCGGCGGAGCTGATGTTGGAGATGCCCAATTTCTTCGTTGCAAATTCTCAATCGGTTCATGTTGGCCGGAGATTTTCGGCTCTGACGGCGGACGAGGATCTGGAAATGGGGAATTCGTACGTCATGTTTCCGATGAAGAAGGTGAATTCCGTGGTGTCGGCGGCGGATATGGGGGCGTTGTTCCTCGCCGCCGAGCGGGTCGCCGGCGGGAAGAGGCGGCGGATCGTCGGCGGTGGGGAATCGGATGTTGGTGTTTGGCCGGCGGTGGAAGCCGAGGAGAAGTTGAAATTGGATGTGGAGGAGTTTTCGGCGGCGCCGGAGTTGGCTCATCGGCGGTCGATGTGTAGGTCGAGGAAGCCGTTGTTGGAAACTATAGTTGAAGAGCCGATATGTTTAAGATAATTTTGGGGAAAGTGGAGAATTGGGGGATTAATTTGAAAGTATTTGAATTGTTTTTTTTTTGTTTGGATTTGGGGGTTTTTCTTTTTGATAATTAGTAAAAGGAAAACCTATTGGTTCATTGATTAGGATCATGGAAAGATTAGTTGATTGATGTTAGACTTTTGGAATTTTTCTATTCTGTTTGAAGAATGGCAAGATTTGTATAGTTATGTCTAATACTTCACTCTATATAATTTTTTTGTTAATTGTGTAAATATGTATGATACTTCGCCCAATATTAAAC ATGGGGAATTACATTTCTTGTACGCTTTCGACTCCAATTAGCGGCAGAGGTTCGAATTCTTCGACGACTGCGACGGTGATCTTTCCGAGCGGCGAGATTCGGAAATTTCACGAACCGGTAAACGCGGCGGAGCTGATGTTGGAGATGCCCAATTTCTTCGTTGCAAATTCTCAATCGGTTCATGTTGGCCGGAGATTTTCGGCTCTGACGGCGGACGAGGATCTGGAAATGGGGAATTCGTACGTCATGTTTCCGATGAAGAAGGTGAATTCCGTGGTGTCGGCGGCGGATATGGGGGCGTTGTTCCTCGCCGCCGAGCGGGTCGCCGGCGGGAAGAGGCGGCGGATCGTCGGCGGTGGGGAATCGGATGTTGGTGTTTGGCCGGCGGTGGAAGCCGAGGAGAAGTTGAAATTGGATGTGGAGGAGTTTTCGGCGGCGCCGGAGTTGGCTCATCGGCGGTCGATGTGTAGGTCGAGGAAGCCGTTGTTGGAAACTATAGTTGAAGAGCCGATATGTTTAAGATAA MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGALFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEEKLKLDVEEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR Homology
BLAST of Sed0021808 vs. NCBI nr
Match: XP_038876498.1 (uncharacterized protein LOC120068930 [Benincasa hispida]) HSP 1 Score: 268.5 bits (685), Expect = 4.1e-68 Identity = 143/184 (77.72%), Postives = 155/184 (84.24%), Query Frame = 0
BLAST of Sed0021808 vs. NCBI nr
Match: XP_011656216.1 (uncharacterized protein LOC105435675 [Cucumis sativus] >KGN51040.1 hypothetical protein Csa_008425 [Cucumis sativus]) HSP 1 Score: 258.8 bits (660), Expect = 3.3e-65 Identity = 138/186 (74.19%), Postives = 150/186 (80.65%), Query Frame = 0
BLAST of Sed0021808 vs. NCBI nr
Match: KAG6579026.1 (hypothetical protein SDJN03_23474, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 258.1 bits (658), Expect = 5.6e-65 Identity = 135/177 (76.27%), Postives = 151/177 (85.31%), Query Frame = 0
BLAST of Sed0021808 vs. NCBI nr
Match: XP_023550655.1 (uncharacterized protein LOC111808736 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 258.1 bits (658), Expect = 5.6e-65 Identity = 136/177 (76.84%), Postives = 151/177 (85.31%), Query Frame = 0
BLAST of Sed0021808 vs. NCBI nr
Match: XP_022939318.1 (uncharacterized protein LOC111445271 [Cucurbita moschata]) HSP 1 Score: 258.1 bits (658), Expect = 5.6e-65 Identity = 136/177 (76.84%), Postives = 150/177 (84.75%), Query Frame = 0
BLAST of Sed0021808 vs. ExPASy TrEMBL
Match: A0A0A0KN52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G416270 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 1.6e-65 Identity = 138/186 (74.19%), Postives = 150/186 (80.65%), Query Frame = 0
BLAST of Sed0021808 vs. ExPASy TrEMBL
Match: A0A6J1FLB6 (uncharacterized protein LOC111445271 OS=Cucurbita moschata OX=3662 GN=LOC111445271 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 2.7e-65 Identity = 136/177 (76.84%), Postives = 150/177 (84.75%), Query Frame = 0
BLAST of Sed0021808 vs. ExPASy TrEMBL
Match: A0A6J1K1K1 (uncharacterized protein LOC111489803 OS=Cucurbita maxima OX=3661 GN=LOC111489803 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 3.9e-64 Identity = 134/177 (75.71%), Postives = 149/177 (84.18%), Query Frame = 0
BLAST of Sed0021808 vs. ExPASy TrEMBL
Match: A0A6J1JT13 (uncharacterized protein LOC111487586 OS=Cucurbita maxima OX=3661 GN=LOC111487586 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 6.6e-64 Identity = 135/177 (76.27%), Postives = 148/177 (83.62%), Query Frame = 0
BLAST of Sed0021808 vs. ExPASy TrEMBL
Match: A0A6J1H4S2 (uncharacterized protein LOC111460504 OS=Cucurbita moschata OX=3662 GN=LOC111460504 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 1.1e-63 Identity = 135/177 (76.27%), Postives = 147/177 (83.05%), Query Frame = 0
BLAST of Sed0021808 vs. TAIR 10
Match: AT5G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 125.2 bits (313), Expect = 5.2e-29 Identity = 79/191 (41.36%), Postives = 112/191 (58.64%), Query Frame = 0
BLAST of Sed0021808 vs. TAIR 10
Match: AT3G03280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27 Identity = 75/177 (42.37%), Postives = 106/177 (59.89%), Query Frame = 0
BLAST of Sed0021808 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07 Identity = 35/129 (27.13%), Postives = 56/129 (43.41%), Query Frame = 0
BLAST of Sed0021808 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06 Identity = 25/88 (28.41%), Postives = 44/88 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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