Sed0021463 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTGCTGTGGTGGAAACTGTGGGTGCGGCTCCGCCTGCCAGTGCGGAAGCGGCTGTGGAGGGTGAGAAATCGCTAATCATTTATTCGTGTTTATGCGGGAAATGATTTCTTTCCATTTCGTTTTCATTTCTGTACCTAGATCGGTTTTGATTATCAAATTCTGAAAATGTGAAGAGAAAATTTTATTTGATTTCGGTTACAGAGGATATATATATATATATATAATCGCTTTGATCGGATTAATATTTGATTTGCAGATGCAAGATGTTCCCTGATGAGATCAACTTCTCAGCTGACTCCACCGCTGCCATCCACACCTTCCTTCTCGGTCTTGCTCCTCACAACATGATGTAACTTTCTCAAATTACCCTAAATTCTTTTCTTTCAAATCTCCTCCTTAATTAACCTAAATTCTATTCTCCTCTTCTCACAAAATAATTCTATTTTAAACCATCCGAACTCATTAATATATTTTATGCCAAATTATAAGTTTGGTCCAACAAAATTAGAGTTTAGTCTATGATTTTAAAGACTAGAATTTATTTAATTTGATCTTTATAATTTGATCATAGTCCTTCTAATCGTTTGCAGATTAAGTACATGGAGGTTGGTTATTCATGTATTAATGATTGTAATGTGAGTTAAGCCATTGATTGGACAAAAAAAAAATTACAATGATTAGATAGATAAAAACTAATATTTAAATTTTATGAAACAATAGAAAAAAAGAAAGAGACTAAATTCTAACTTTCTTACGAATATAATAACCAAATTTATAATTTACTATGCATTTTAATAGCCTATTATTATATATTATAAAAAAGTACCAGATAATATTCCTTACTATGACTTTATATTTGTTAATTTATTTAATTGCTATTTTAGAAAAATAACTATATTTCACTCATTTCTTTTAAAATATCATATTTTTATTTACTTTGTGATTTAACAAGTCTCTTAAATTTTTCTTGTTTCCCTTCAACTAACAGTAGTTTTTCATATCAGATCCTTTGAGGTTGCAGAGATGGGAGCCGAGAGCGGCTGCAAATGTGGCGACAATTGCACCTGCGATCCTTGCAACTGCAAATGA ATGTCGTGCTGTGGTGGAAACTGTGGGTGCGGCTCCGCCTGCCAGTGCGGAAGCGGCTGTGGAGGATGCAAGATGTTCCCTGATGAGATCAACTTCTCAGCTGACTCCACCGCTGCCATCCACACCTTCCTTCTCGGTCTTGCTCCTCACAACATGATATCCTTTGAGGTTGCAGAGATGGGAGCCGAGAGCGGCTGCAAATGTGGCGACAATTGCACCTGCGATCCTTGCAACTGCAAATGA ATGTCGTGCTGTGGTGGAAACTGTGGGTGCGGCTCCGCCTGCCAGTGCGGAAGCGGCTGTGGAGGATGCAAGATGTTCCCTGATGAGATCAACTTCTCAGCTGACTCCACCGCTGCCATCCACACCTTCCTTCTCGGTCTTGCTCCTCACAACATGATATCCTTTGAGGTTGCAGAGATGGGAGCCGAGAGCGGCTGCAAATGTGGCGACAATTGCACCTGCGATCCTTGCAACTGCAAATGA MSCCGGNCGCGSACQCGSGCGGCKMFPDEINFSADSTAAIHTFLLGLAPHNMISFEVAEMGAESGCKCGDNCTCDPCNCK Homology
BLAST of Sed0021463 vs. NCBI nr
Match: BAD26571.1 (type-2 metallothionein [Citrullus lanatus]) HSP 1 Score: 135.2 bits (339), Expect = 2.5e-28 Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of Sed0021463 vs. NCBI nr
Match: KAG6596409.1 (Metallothionein-like protein type 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027952.1 Metallothionein-like protein type 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 134.8 bits (338), Expect = 3.3e-28 Identity = 64/80 (80.00%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Sed0021463 vs. NCBI nr
Match: XP_022949247.1 (metallothionein-like protein type 2 [Cucurbita moschata] >XP_022971579.1 metallothionein-like protein type 2 [Cucurbita maxima] >XP_023538679.1 metallothionein-like protein type 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 134.0 bits (336), Expect = 5.6e-28 Identity = 64/80 (80.00%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Sed0021463 vs. NCBI nr
Match: WP_197429621.1 (hypothetical protein, partial [Myroides odoratus]) HSP 1 Score: 134.0 bits (336), Expect = 5.6e-28 Identity = 63/80 (78.75%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of Sed0021463 vs. NCBI nr
Match: XP_038906044.1 (metallothionein-like protein type 2 [Benincasa hispida]) HSP 1 Score: 132.1 bits (331), Expect = 2.1e-27 Identity = 63/80 (78.75%), Postives = 71/80 (88.75%), Query Frame = 0
BLAST of Sed0021463 vs. ExPASy Swiss-Prot
Match: P94029 (Metallothionein-like protein 2A OS=Oryza sativa subsp. japonica OX=39947 GN=MT2A PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.1e-21 Identity = 48/84 (57.14%), Postives = 58/84 (69.05%), Query Frame = 0
BLAST of Sed0021463 vs. ExPASy Swiss-Prot
Match: P30564 (Metallothionein-like protein type 2 OS=Ricinus communis OX=3988 GN=MTI PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 2.0e-20 Identity = 50/84 (59.52%), Postives = 59/84 (70.24%), Query Frame = 0
BLAST of Sed0021463 vs. ExPASy Swiss-Prot
Match: Q41657 (Metallothionein-like protein type 2 OS=Vicia faba OX=3906 GN=MTI PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 7.6e-20 Identity = 47/81 (58.02%), Postives = 62/81 (76.54%), Query Frame = 0
BLAST of Sed0021463 vs. ExPASy Swiss-Prot
Match: Q19LA2 (Metallothionein type 2b OS=Colocasia esculenta OX=4460 PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 9.9e-20 Identity = 50/87 (57.47%), Postives = 58/87 (66.67%), Query Frame = 0
BLAST of Sed0021463 vs. ExPASy Swiss-Prot
Match: Q39459 (Metallothionein-like protein 2 OS=Cicer arietinum OX=3827 PE=3 SV=2) HSP 1 Score: 97.1 bits (240), Expect = 9.9e-20 Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 0
BLAST of Sed0021463 vs. ExPASy TrEMBL
Match: Q6I674 (Type-2 metallothionein OS=Citrullus lanatus OX=3654 GN=CLMT2 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.2e-28 Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of Sed0021463 vs. ExPASy TrEMBL
Match: A0A6J1I8Z4 (metallothionein-like protein type 2 OS=Cucurbita maxima OX=3661 GN=LOC111470252 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.7e-28 Identity = 64/80 (80.00%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Sed0021463 vs. ExPASy TrEMBL
Match: A0A6J1GBI9 (metallothionein-like protein type 2 OS=Cucurbita moschata OX=3662 GN=LOC111452655 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.7e-28 Identity = 64/80 (80.00%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Sed0021463 vs. ExPASy TrEMBL
Match: A0A6J1F8X2 (metallothionein-like protein type 2 B OS=Cucurbita moschata OX=3662 GN=LOC111441898 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.7e-27 Identity = 62/80 (77.50%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of Sed0021463 vs. ExPASy TrEMBL
Match: A0A6J1J2S1 (metallothionein-like protein type 2 B OS=Cucurbita maxima OX=3661 GN=LOC111482153 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 8.7e-27 Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 0
BLAST of Sed0021463 vs. TAIR 10
Match: AT3G09390.1 (metallothionein 2A ) HSP 1 Score: 95.1 bits (235), Expect = 2.7e-20 Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of Sed0021463 vs. TAIR 10
Match: AT5G02380.1 (metallothionein 2B ) HSP 1 Score: 84.7 bits (208), Expect = 3.6e-17 Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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