Sed0021178 (gene) Chayote v1

Overview
NameSed0021178
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG03: 1727296 .. 1730753 (+)
RNA-Seq ExpressionSed0021178
SyntenySed0021178
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTCTTCATCTCTTTCTCTGCTTCTCGTTTTTTTTCTTACAAAATCTCTGTATTCAAAGAACGAATGCAGTTCTTCGAAACCTATTTCATCTGCTATTCATCTTCGACGACTCTTTGATAGTAAAAAAGGTATGATTTTTTTTTAATCGTTCCGATACGCAGGTGAATCGTTTCATTTTAACTCTGAAAACGTCCGATTCGGGCGAAAGGCGATTCAAAATTACGATGTGAATCGATTTCTTCACGATTCGTTTCGAATCGTACGTTTTGAATCGCAAAACGCACGTTTTTGATAACCTTGTATATATATACATAAGTGAGTATTCGGGTCTGCTTACACGTACTTCGACTATCTCGTGAGACATATGAATTGACAGTACAACGTTTGGATGCCAAGAAACTCGAGAAAATTAATTCTATGGAAGTGGCTACATAACCTTTTGGTTTCTTAAGGCCCTTTTGACACATGGTGGTTTTGTATCTTTGTAAATTTTGATTGCTTGCTTTTTTTTCTTCTACAGGCTTACTGATTTGGAATGATTACTCCTGGATTGTAAACTTTCTTGTTCTTTTTATATTTAGTTGATTATGAGAGTGCTTATAAATCCATCGCCCACTCTGATTTTATCAAATGACTTGAGTTACCAACATGACTCATGTTACCCGGTTAGTTGTGCACAGAAGCATTTCCATCAATGGGTGAATGCTATTCCAGAATTGAAATCATGTATAGGGGGTAGGATAACGTATGGGTGTAATGTAGTTTCGATGTTATCGATGAGTATTCCACAATTGAGTTGTGCGGTTCCATCGACAAGAGCCCTGGTATTTAGGAATGGTGTTGGGACCCTTTTGAAATGTGAGGAAGATGAGGCAATCGGAATGGTCGTTGATGAAGACGGAATCGAAGAACCCTCTCGGGAGGGGAAATTACCTCCCTGGGGAGACATGGAAAATCGGTATGAGCCTATCTTTCAATCTGAAGATGTAAGCCAGTCCAAAATGTTAGAAGGGGAGGCTTTGGTAAATGACAGCAAGGTACATTTTCTTGAGGAAACTGATGTAGTTATGCTATCAAAGCGTATTCTAATTCTCAGCAGAAAAAATAAAGTCAGAAGTGCATTGGAATTATTCAGGTCCATGCAATTAGCAGGTCTTCTGCCAAGTTTTCATGCTTTAAATTCACTTTTAGCTTGTCTTTTGAGGAATGGGCTACTTGATGATGGTTTAAGAATATTTGAGTTCATGAAGTCAAACAAGTCATCAACAGGGCACAGTTATAGCCTTATGCTCAAAGCAGTTGCAGATACTCATGGATTTCTTTCTGCTCTTGAGATGTTCAAGGCGTGGGAGCGCGAACCCGACTTAAAACAATTCGATGCAATTGTTTATAACACGATGATATCAGTCTGTGGAAAAGAGAATAACTGGATTGAAGCTGAGAGAACGTGGAGACTAATGGAGGCGAATGGCTGCAGTGCAACGCACATAACTTATTCTCTATTGGTGAGCACTTTTGTCCGCAGCAATCAGAACGAGCTTGCAGTTGACATTTATGTAAAGATGGTTCAAAATCATTGTAAACCAGGTAATGATACAATGCAAGCTATCATTGGCGCATCTTCAAAGGAAGGGAAGTGGGATTTTGCTTTAAGAGTCTTTCAAGACATGTTGAAATGTGGATTCCAACCTAATTCCATTGCATTCAATGCCTTGATCAATGCCCTAGGAAAAGCCAAGGAGGTTACTTTAGCATTCAGCATATTCAATGTGATGAAATCTATGGGCCATTCACCTGATGTTTATACATGGAATGCACTACTTGGTGCTCTTTACCATGCAAATCGCTACAACGATGCCATTCATCTCTTTGAGTTTGTGAAAAGAGAGGAGAAAGCTCATTTGAATATACATATTTACAATTCCATTCTAATGTGTTGTTCAAAGCTTGGGTTATGGGACAGGGCTCTCCAAATTTTATGGGAAATGGAAGCTTCTGGTCTCTTAATTTCAGCTTCATCATATAACATTGTTATTGGTGCATGCGAGACGGCTAGGAAGCCCGAAATTGCATTGCAAGTTTATGAACGCATGATTCATCAGAAGCACACTCCTGATACCTTCACTCATTTGTCACTTATCAGATGCTGCATTTGGGGATCTTTATGGGATGAAGTGGAACTACTTATAAATGTAAGTGCTTACCTCTATAACTGGTCCTTTGTCGCTACGATAATTTTGTACTATTCTAAAGAGGGATGGATCTTTCCATATAGACGTTTAATTCAAATATTTCACCGCTGTATGTTTCCTTCCATCTGTGATGGATATATGCCTCCCATGCAAATTCATTCAACGATCATAGTTTATAAGCTTTATTTCCAAGAGCATAGCTTGATGTATAATCCTGTAATCAAGAAGTTATGAGTTTAAATCCCTCATCTCAAATGTTGTTGAATAAAAAAAAGTTTTATATTCAATGACGAGTTAGTAATGTGTCCCTTAGGAGTGGTGCAGTGGAGTGTAGTAGTTGAGCGTTTGAGTTTTGAGGGTGTTCTCCCCTCAAAGTCATAGGTTCGAAGAACCTGAGAGGATAAATTTCTAAGGCGACTTCCAATTTCGCTTTCAGTTTTAATATTTCGGTGTCATAGTCTAGGGACGAGTTAGTGGTGTGTCCTGAGTTTAGAAGAGCAAAACTCCAAGTTCCCAAGCCATAAAAAAAAAAAAAAGAGTTAGGAACATCATTCAAATTCATATAATTAAATTGGAAAAGGATACAACATTATGGTTTCTGAGCACTTTAGATATTTTAGTTGGTTTTTTTTCACCTATGATCTCACTTAACTGCTGTTCATTGATCTACAATTTACCTTGTCCAACCTTTTGCATTGAGAATTATGAAGTTTTGTACCTGATAATTGTTGTTCTGCAGAAGTTTGCACCCGATGTATCTGTGTACAATGCGGTCATACAAGGAACGTGCTTAAGAGGCAAGACTGAGTTAGCGAAAAAGCTTTACATGAAGATGCGCAAAAACGGTATCCAACCCGATGGAAAAACACGAGCTTTGATGCTTCAGAACTTGCCAAAGGATCCTGCTAGACTGAAGAACAGGCTGGCTTCTCGTTTCAAGAAAAGACACAGACATTATCACCACAGGTAACATGACTGTAAAAGTTGGAAAAAGATTAGGTTCCTGTAAATGAAGTATATGTTGTACATGTATTAATGCTAGCTCAAAGTCATTGCTGTATAATAGCTCAGCAGAAGGGCTGGTTTATTGAATCAGTTGGATTATATTCCATTCAGATCCTGTTTTCTTCCTGTCTTTAGTCATCTTAACATATCTCTAAGAGAAGGGGCTTACAAAATTTCTAGGAGTCTGATTAATCCAATCCAAATTGTACTAGTTGCAAGCATTACAATCAAGTCTTTATTTTAAGAATATACACTGCCC

mRNA sequence

GTCTCTTCATCTCTTTCTCTGCTTCTCGTTTTTTTTCTTACAAAATCTCTGTATTCAAAGAACGAATGCAGTTCTTCGAAACCTATTTCATCTGCTATTCATCTTCGACGACTCTTTGATAGTAAAAAAGGCTTACTGATTTGGAATGATTACTCCTGGATTGTAAACTTTCTTGTTCTTTTTATATTTAGTTGATTATGAGAGTGCTTATAAATCCATCGCCCACTCTGATTTTATCAAATGACTTGAGTTACCAACATGACTCATGTTACCCGGTTAGTTGTGCACAGAAGCATTTCCATCAATGGGTGAATGCTATTCCAGAATTGAAATCATGTATAGGGGGTAGGATAACGTATGGGTGTAATGTAGTTTCGATGTTATCGATGAGTATTCCACAATTGAGTTGTGCGGTTCCATCGACAAGAGCCCTGGTATTTAGGAATGGTGTTGGGACCCTTTTGAAATGTGAGGAAGATGAGGCAATCGGAATGGTCGTTGATGAAGACGGAATCGAAGAACCCTCTCGGGAGGGGAAATTACCTCCCTGGGGAGACATGGAAAATCGGTATGAGCCTATCTTTCAATCTGAAGATGTAAGCCAGTCCAAAATGTTAGAAGGGGAGGCTTTGGTAAATGACAGCAAGGTACATTTTCTTGAGGAAACTGATGTAGTTATGCTATCAAAGCGTATTCTAATTCTCAGCAGAAAAAATAAAGTCAGAAGTGCATTGGAATTATTCAGGTCCATGCAATTAGCAGGTCTTCTGCCAAGTTTTCATGCTTTAAATTCACTTTTAGCTTGTCTTTTGAGGAATGGGCTACTTGATGATGGTTTAAGAATATTTGAGTTCATGAAGTCAAACAAGTCATCAACAGGGCACAGTTATAGCCTTATGCTCAAAGCAGTTGCAGATACTCATGGATTTCTTTCTGCTCTTGAGATGTTCAAGGCGTGGGAGCGCGAACCCGACTTAAAACAATTCGATGCAATTGTTTATAACACGATGATATCAGTCTGTGGAAAAGAGAATAACTGGATTGAAGCTGAGAGAACGTGGAGACTAATGGAGGCGAATGGCTGCAGTGCAACGCACATAACTTATTCTCTATTGGTGAGCACTTTTGTCCGCAGCAATCAGAACGAGCTTGCAGTTGACATTTATGTAAAGATGGTTCAAAATCATTGTAAACCAGGTAATGATACAATGCAAGCTATCATTGGCGCATCTTCAAAGGAAGGGAAGTGGGATTTTGCTTTAAGAGTCTTTCAAGACATGTTGAAATGTGGATTCCAACCTAATTCCATTGCATTCAATGCCTTGATCAATGCCCTAGGAAAAGCCAAGGAGGTTACTTTAGCATTCAGCATATTCAATGTGATGAAATCTATGGGCCATTCACCTGATGTTTATACATGGAATGCACTACTTGGTGCTCTTTACCATGCAAATCGCTACAACGATGCCATTCATCTCTTTGAGTTTGTGAAAAGAGAGGAGAAAGCTCATTTGAATATACATATTTACAATTCCATTCTAATGTGTTGTTCAAAGCTTGGGTTATGGGACAGGGCTCTCCAAATTTTATGGGAAATGGAAGCTTCTGGTCTCTTAATTTCAGCTTCATCATATAACATTGTTATTGGTGCATGCGAGACGGCTAGGAAGCCCGAAATTGCATTGCAAGTTTATGAACGCATGATTCATCAGAAGCACACTCCTGATACCTTCACTCATTTGTCACTTATCAGATGCTGCATTTGGGGATCTTTATGGGATGAAGTGGAACTACTTATAAATAAGTTTGCACCCGATGTATCTGTGTACAATGCGGTCATACAAGGAACGTGCTTAAGAGGCAAGACTGAGTTAGCGAAAAAGCTTTACATGAAGATGCGCAAAAACGGTATCCAACCCGATGGAAAAACACGAGCTTTGATGCTTCAGAACTTGCCAAAGGATCCTGCTAGACTGAAGAACAGGCTGGCTTCTCGTTTCAAGAAAAGACACAGACATTATCACCACAGGTAACATGACTGTAAAAGTTGGAAAAAGATTAGGTTCCTGTAAATGAAGTATATGTTGTACATGTATTAATGCTAGCTCAAAGTCATTGCTGTATAATAGCTCAGCAGAAGGGCTGGTTTATTGAATCAGTTGGATTATATTCCATTCAGATCCTGTTTTCTTCCTGTCTTTAGTCATCTTAACATATCTCTAAGAGAAGGGGCTTACAAAATTTCTAGGAGTCTGATTAATCCAATCCAAATTGTACTAGTTGCAAGCATTACAATCAAGTCTTTATTTTAAGAATATACACTGCCC

Coding sequence (CDS)

ATGAGAGTGCTTATAAATCCATCGCCCACTCTGATTTTATCAAATGACTTGAGTTACCAACATGACTCATGTTACCCGGTTAGTTGTGCACAGAAGCATTTCCATCAATGGGTGAATGCTATTCCAGAATTGAAATCATGTATAGGGGGTAGGATAACGTATGGGTGTAATGTAGTTTCGATGTTATCGATGAGTATTCCACAATTGAGTTGTGCGGTTCCATCGACAAGAGCCCTGGTATTTAGGAATGGTGTTGGGACCCTTTTGAAATGTGAGGAAGATGAGGCAATCGGAATGGTCGTTGATGAAGACGGAATCGAAGAACCCTCTCGGGAGGGGAAATTACCTCCCTGGGGAGACATGGAAAATCGGTATGAGCCTATCTTTCAATCTGAAGATGTAAGCCAGTCCAAAATGTTAGAAGGGGAGGCTTTGGTAAATGACAGCAAGGTACATTTTCTTGAGGAAACTGATGTAGTTATGCTATCAAAGCGTATTCTAATTCTCAGCAGAAAAAATAAAGTCAGAAGTGCATTGGAATTATTCAGGTCCATGCAATTAGCAGGTCTTCTGCCAAGTTTTCATGCTTTAAATTCACTTTTAGCTTGTCTTTTGAGGAATGGGCTACTTGATGATGGTTTAAGAATATTTGAGTTCATGAAGTCAAACAAGTCATCAACAGGGCACAGTTATAGCCTTATGCTCAAAGCAGTTGCAGATACTCATGGATTTCTTTCTGCTCTTGAGATGTTCAAGGCGTGGGAGCGCGAACCCGACTTAAAACAATTCGATGCAATTGTTTATAACACGATGATATCAGTCTGTGGAAAAGAGAATAACTGGATTGAAGCTGAGAGAACGTGGAGACTAATGGAGGCGAATGGCTGCAGTGCAACGCACATAACTTATTCTCTATTGGTGAGCACTTTTGTCCGCAGCAATCAGAACGAGCTTGCAGTTGACATTTATGTAAAGATGGTTCAAAATCATTGTAAACCAGGTAATGATACAATGCAAGCTATCATTGGCGCATCTTCAAAGGAAGGGAAGTGGGATTTTGCTTTAAGAGTCTTTCAAGACATGTTGAAATGTGGATTCCAACCTAATTCCATTGCATTCAATGCCTTGATCAATGCCCTAGGAAAAGCCAAGGAGGTTACTTTAGCATTCAGCATATTCAATGTGATGAAATCTATGGGCCATTCACCTGATGTTTATACATGGAATGCACTACTTGGTGCTCTTTACCATGCAAATCGCTACAACGATGCCATTCATCTCTTTGAGTTTGTGAAAAGAGAGGAGAAAGCTCATTTGAATATACATATTTACAATTCCATTCTAATGTGTTGTTCAAAGCTTGGGTTATGGGACAGGGCTCTCCAAATTTTATGGGAAATGGAAGCTTCTGGTCTCTTAATTTCAGCTTCATCATATAACATTGTTATTGGTGCATGCGAGACGGCTAGGAAGCCCGAAATTGCATTGCAAGTTTATGAACGCATGATTCATCAGAAGCACACTCCTGATACCTTCACTCATTTGTCACTTATCAGATGCTGCATTTGGGGATCTTTATGGGATGAAGTGGAACTACTTATAAATAAGTTTGCACCCGATGTATCTGTGTACAATGCGGTCATACAAGGAACGTGCTTAAGAGGCAAGACTGAGTTAGCGAAAAAGCTTTACATGAAGATGCGCAAAAACGGTATCCAACCCGATGGAAAAACACGAGCTTTGATGCTTCAGAACTTGCCAAAGGATCCTGCTAGACTGAAGAACAGGCTGGCTTCTCGTTTCAAGAAAAGACACAGACATTATCACCACAGGTAA

Protein sequence

MRVLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSMLSMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDMENRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVSVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRFKKRHRHYHHR
Homology
BLAST of Sed0021178 vs. NCBI nr
Match: XP_038891011.1 (pentatricopeptide repeat-containing protein At3g29290 [Benincasa hispida] >XP_038891012.1 pentatricopeptide repeat-containing protein At3g29290 [Benincasa hispida])

HSP 1 Score: 994.6 bits (2570), Expect = 3.8e-286
Identity = 499/606 (82.34%), Postives = 532/606 (87.79%), Query Frame = 0

Query: 6   NPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSMLSMS 65
           NPSPTLIL N+  YQHDS YP S  +K     +N  P  KSCI   ITY  N VSML MS
Sbjct: 7   NPSPTLILLNEFHYQHDSYYPFSWTEKRLRPCINVNPVSKSCIRCTITYKGNAVSMLLMS 66

Query: 66  IPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDMENRY 125
            P+L+  V STR + FR  VGTLL C EDEAI +V+DE+G+ E SRE KLPPWGDM ++ 
Sbjct: 67  TPRLNLMVQSTRGMEFRTCVGTLLNCGEDEAIDLVIDEEGVGESSREWKLPPWGDMAHQD 126

Query: 126 EPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELFRSM 185
           EP FQSED +QSK+LEGE L NDSKVHFLEETD VMLSKR+LILSRKNKVRSALELFRS+
Sbjct: 127 EPTFQSEDANQSKILEGEPLENDSKVHFLEETDKVMLSKRLLILSRKNKVRSALELFRSL 186

Query: 186 QLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTHGFL 245
           QLA LLPS HALNSLLACLLR GL DDGLRIFEFMKSN+  TGH+YSL+LKAVA+ HGFL
Sbjct: 187 QLAALLPSLHALNSLLACLLRKGLFDDGLRIFEFMKSNELLTGHTYSLVLKAVANAHGFL 246

Query: 246 SALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHITYSL 305
           SALEMFKAWE + DL QFDA+VYNTMIS+CGK+NNW+EAERTWRLME NGCSATHITY+L
Sbjct: 247 SALEMFKAWEHKYDLTQFDAVVYNTMISICGKDNNWVEAERTWRLMEENGCSATHITYTL 306

Query: 306 LVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCG 365
           LVSTFVR NQNELA+D YVKMVQN  KPGNDTMQAIIGASSKEGKWDFALRVF DMLKCG
Sbjct: 307 LVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQAIIGASSKEGKWDFALRVFHDMLKCG 366

Query: 366 FQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYNDAI 425
            QPNS+AFNALINALG AKEVTLAFSI+NVMKSMGHSPDVYTWNALLGALY ANRYNDAI
Sbjct: 367 LQPNSVAFNALINALGNAKEVTLAFSIYNVMKSMGHSPDVYTWNALLGALYKANRYNDAI 426

Query: 426 HLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIVIGA 485
           HLFEFVKR EKA LNIHIYN+ILM CSKLGLWDRALQILWEMEASGL ISASSYNIVI A
Sbjct: 427 HLFEFVKR-EKAQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLAISASSYNIVITA 486

Query: 486 CETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVSVYN 545
           CE ARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELL+NK APDVSVYN
Sbjct: 487 CEMARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLLNKSAPDVSVYN 546

Query: 546 AVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRFKKRH 605
           AVIQG CLRGKT+LAKKLY KMR+NGIQPDGKTRALMLQNLPKDPARLKNR AS FKKRH
Sbjct: 547 AVIQGMCLRGKTDLAKKLYTKMRENGIQPDGKTRALMLQNLPKDPARLKNRWASGFKKRH 606

Query: 606 RHYHHR 612
           RHYHHR
Sbjct: 607 RHYHHR 611

BLAST of Sed0021178 vs. NCBI nr
Match: XP_008459413.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cucumis melo])

HSP 1 Score: 972.6 bits (2513), Expect = 1.6e-279
Identity = 488/609 (80.13%), Postives = 529/609 (86.86%), Query Frame = 0

Query: 3   VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
           VL N SPTLIL N+ +YQHDS YP     KH  Q +N  P LKSC+   I Y  N VSML
Sbjct: 4   VLGNSSPTLILLNEFNYQHDSYYPFRREDKHLRQCINVNPMLKSCMRCTIMYDGNAVSML 63

Query: 63  SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
            MS P+L+  V S R + FR GVGTLL C EDEAI +V+DE+G+E  SRE KLPPWGDM 
Sbjct: 64  PMSTPRLNLVVQSIRGMQFRTGVGTLLNCGEDEAIELVIDEEGVES-SREWKLPPWGDMT 123

Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
           ++ E  FQSEDV+  K+LEGEAL N+SKVHFLEETD V+LSKRILILSRKNKVRSALELF
Sbjct: 124 HQDEAAFQSEDVNLPKILEGEALENESKVHFLEETDKVLLSKRILILSRKNKVRSALELF 183

Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
           RSMQLAG+LP+ HALNSLLACLLRNGL  DGLRIFEFMK N+ STGH+YSL+LKAVA+ H
Sbjct: 184 RSMQLAGVLPNLHALNSLLACLLRNGLFADGLRIFEFMKLNELSTGHTYSLVLKAVANAH 243

Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
           GFLSALEMFKAWE +  L QFDAIVYNTMIS+CGK+NNW+EAERTWRLME NGC+ATHIT
Sbjct: 244 GFLSALEMFKAWEHKYVLTQFDAIVYNTMISICGKDNNWVEAERTWRLMEKNGCTATHIT 303

Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
           YSLLVSTFVR NQNELA+D YVKMVQ+  KPGNDTMQAIIGASSKEGKWDFAL VFQDML
Sbjct: 304 YSLLVSTFVRCNQNELAIDAYVKMVQSSFKPGNDTMQAIIGASSKEGKWDFALGVFQDML 363

Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
           KCG QPNS++FNALINALGKAKEVTLAFSI+NVMKSMGHSPDVYTWNALLGALY ANRYN
Sbjct: 364 KCGLQPNSVSFNALINALGKAKEVTLAFSIYNVMKSMGHSPDVYTWNALLGALYKANRYN 423

Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIV 482
           DAIHLF FVKREEKA LNIHIYN+ILMCCSKLGLW+RALQILWEME SGLLIS +SYNIV
Sbjct: 424 DAIHLFGFVKREEKAQLNIHIYNTILMCCSKLGLWERALQILWEMEVSGLLISTTSYNIV 483

Query: 483 IGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVS 542
           + ACETARKPEIALQVYERM+HQKHTPDTFTHLSLIRCCIWGSLWDEVELL+NK  PDVS
Sbjct: 484 LTACETARKPEIALQVYERMVHQKHTPDTFTHLSLIRCCIWGSLWDEVELLLNKSGPDVS 543

Query: 543 VYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRFK 602
           VYN VIQG CLRGKT+LAKKLY KMR+N IQ DGKTRALMLQNLPKDPARLKNR AS FK
Sbjct: 544 VYNVVIQGMCLRGKTDLAKKLYTKMRENSIQSDGKTRALMLQNLPKDPARLKNRWASGFK 603

Query: 603 KRHRHYHHR 612
           KR R YHHR
Sbjct: 604 KRRRRYHHR 611

BLAST of Sed0021178 vs. NCBI nr
Match: XP_022990659.1 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cucurbita maxima])

HSP 1 Score: 958.0 bits (2475), Expect = 4.0e-275
Identity = 492/610 (80.66%), Postives = 533/610 (87.38%), Query Frame = 0

Query: 3   VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
           +LIN  PTLILSN+L+YQ  SCYPVSCA KHFH     IPELKSCI  RIT+G NV SM 
Sbjct: 4   LLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----VIPELKSCIRRRITHGGNVASMS 63

Query: 63  SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
           SMSIP+L+  V ST+ L FR        CEEDEAI +VVDE G+EE SRE K PPWG+++
Sbjct: 64  SMSIPRLNFVVRSTKFLEFRT-------CEEDEAISLVVDE-GVEESSREWKSPPWGEVK 123

Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
           N+ EPIFQSEDV+QS++LEGE LV+D KV+FLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 NQDEPIFQSEDVNQSEVLEGEGLVSDRKVYFLEETDEVMLSKRILILSRKNKVRSAMELF 183

Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
           RSM LAGLLPSFHA NSLLACLLRNGL DDGLRIFEFMKSNK STGH+YSL+LKAVADTH
Sbjct: 184 RSMHLAGLLPSFHASNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVADTH 243

Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
           GFLSALEMF+ WE E DLKQFDAIVYN MISVCGKENNW+EAER WRLME NGCSATH+T
Sbjct: 244 GFLSALEMFRTWEHEYDLKQFDAIVYNMMISVCGKENNWVEAERIWRLMEENGCSATHLT 303

Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
           YSLLVST+VR NQNELA+DIYVKMVQN  KP NDTMQAIIGASS+EG+WDFALRVFQ+ML
Sbjct: 304 YSLLVSTYVRCNQNELAIDIYVKMVQNCYKPANDTMQAIIGASSREGRWDFALRVFQEML 363

Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
           KCG +PNS+AFNALINALGKA EVTLAFSI+N MKSMGHSPDVYTW ALLGALY ANRYN
Sbjct: 364 KCGLEPNSVAFNALINALGKANEVTLAFSIYNRMKSMGHSPDVYTWKALLGALYKANRYN 423

Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEME-ASGLLISASSYNI 482
           DAI LFEFVKREEKA LNIHIYN++L+ CSKLGLWDRALQILWEME ASG L+SASSYNI
Sbjct: 424 DAIRLFEFVKREEKAQLNIHIYNTVLLSCSKLGLWDRALQILWEMEAASGCLVSASSYNI 483

Query: 483 VIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDV 542
           VI ACE ARKPEIAL+VYERMIHQK TPDTFT LSLIR CIWGSLWDEVELL++K A D 
Sbjct: 484 VISACEMARKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSKSAHDA 543

Query: 543 SVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRF 602
           SVYNAVIQG CLRGKT+LAKK Y KM + GIQPDGKTRALMLQ LPKD A LKNRLASRF
Sbjct: 544 SVYNAVIQGMCLRGKTDLAKKFYTKMHEIGIQPDGKTRALMLQTLPKDRAGLKNRLASRF 599

Query: 603 KKRHRHYHHR 612
           KKRHRHYHHR
Sbjct: 604 KKRHRHYHHR 599

BLAST of Sed0021178 vs. NCBI nr
Match: XP_022964230.1 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cucurbita moschata])

HSP 1 Score: 956.4 bits (2471), Expect = 1.2e-274
Identity = 493/610 (80.82%), Postives = 533/610 (87.38%), Query Frame = 0

Query: 3   VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
           +LIN  PTLILSN+L+YQ  SCYPVSCA KHFH     IPELKSCI  RIT+G NV SM 
Sbjct: 4   LLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----GIPELKSCIRRRITHGGNVASMS 63

Query: 63  SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
           SMSIP+L+  V ST+AL +R        CEEDEAI +VVDE G+EE SRE K PPWG+++
Sbjct: 64  SMSIPRLNFVVRSTKALEYRT-------CEEDEAIRLVVDE-GVEESSREWKSPPWGEVK 123

Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
           N+ E IFQSEDV+QS+ LEGE LV+D KV+FLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 NQDESIFQSEDVNQSEGLEGEGLVSDRKVYFLEETDEVMLSKRILILSRKNKVRSAMELF 183

Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
           RSM LAGLLPSFHA NSLLACLLRNGL DDGLRIFEFMKSNK STGH+YSL+LKAVADTH
Sbjct: 184 RSMHLAGLLPSFHASNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVADTH 243

Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
           GFLSALEMF+ WE E DLKQFDAIVYNTMISVCGKENNW+EAER WRLMEANGCS TH+T
Sbjct: 244 GFLSALEMFRTWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERIWRLMEANGCSTTHLT 303

Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
           YSLLVS +VR NQNELA+DIYVKMVQN  KP NDTMQAIIGASS+EG+WDFALRVFQDML
Sbjct: 304 YSLLVSMYVRCNQNELAIDIYVKMVQNDLKPANDTMQAIIGASSREGRWDFALRVFQDML 363

Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
           KCG +PNS+AFNALINALGKA EVTLAFSI+N MKSMGHSPDVYTW ALLGALY ANRYN
Sbjct: 364 KCGLEPNSVAFNALINALGKANEVTLAFSIYNRMKSMGHSPDVYTWKALLGALYKANRYN 423

Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEME-ASGLLISASSYNI 482
           DAI LF+FVKREEKA LNIHIYN+IL+ CSKLGLWDRALQILWEME ASG L+SASSYNI
Sbjct: 424 DAIRLFQFVKREEKAQLNIHIYNTILLSCSKLGLWDRALQILWEMEAASGRLVSASSYNI 483

Query: 483 VIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDV 542
           VI ACE A+KPEIAL+VYERMIHQK TPDTFT LSLIR CIWGSLWDEVELL++K A D 
Sbjct: 484 VISACEMAKKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSKSAHDA 543

Query: 543 SVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRF 602
           SVYNAVIQG CLRGKT+LAKKLY KMRK GIQPDGKTRALMLQ LPKD A LKNRLASRF
Sbjct: 544 SVYNAVIQGMCLRGKTDLAKKLYTKMRKIGIQPDGKTRALMLQTLPKDRAGLKNRLASRF 599

Query: 603 KKRHRHYHHR 612
           KKRHRHY HR
Sbjct: 604 KKRHRHYRHR 599

BLAST of Sed0021178 vs. NCBI nr
Match: XP_023525691.1 (pentatricopeptide repeat-containing protein At3g29290 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 955.3 bits (2468), Expect = 2.6e-274
Identity = 491/610 (80.49%), Postives = 532/610 (87.21%), Query Frame = 0

Query: 3   VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
           +LIN  PTLILSN+L+YQ  SCYPVSCA KHFH     IPELKSCI  RIT+G NV SM 
Sbjct: 4   LLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----VIPELKSCIRRRITHGGNVASMS 63

Query: 63  SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
           SMSIP+L+  V ST+AL FR        CEED+AI +VVD DG+EE SRE K PPWG+++
Sbjct: 64  SMSIPRLNFVVRSTKALEFRT-------CEEDDAIRLVVD-DGVEESSREWKSPPWGEVK 123

Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
           N+ EPIFQSEDV+QS++LEGE L +D KV+FLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 NQDEPIFQSEDVNQSEVLEGEGLGSDRKVYFLEETDEVMLSKRILILSRKNKVRSAMELF 183

Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
           RSM LAGLLPSFHA NSLLACLLRNG  DDGLRIFEFMKSNK STGH+YSL+LKAVADTH
Sbjct: 184 RSMHLAGLLPSFHASNSLLACLLRNGPFDDGLRIFEFMKSNKLSTGHTYSLILKAVADTH 243

Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
           GFLSALEMF+ WE E DLKQFDAIVYNTMISVCGKENNW+EAER WRLMEANGCSATH+T
Sbjct: 244 GFLSALEMFRTWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERIWRLMEANGCSATHLT 303

Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
           YSLLVS +VR NQNELA+DIYVKMVQN  KP NDTMQAIIGASS+EG+WDFALRVFQDML
Sbjct: 304 YSLLVSMYVRCNQNELAIDIYVKMVQNDLKPANDTMQAIIGASSREGRWDFALRVFQDML 363

Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
           KCG +PNS+AFN LINALGKA EVTLAFSI+N MK MGHSPDVYTW ALLGALY ANRYN
Sbjct: 364 KCGLEPNSVAFNTLINALGKANEVTLAFSIYNRMKPMGHSPDVYTWKALLGALYKANRYN 423

Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEME-ASGLLISASSYNI 482
           DAI LFEFVKREEKA LNIHIYN+IL+ CSKLGLWDRALQILWEME ASG L+SASSYNI
Sbjct: 424 DAIRLFEFVKREEKAQLNIHIYNTILLSCSKLGLWDRALQILWEMEAASGRLVSASSYNI 483

Query: 483 VIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDV 542
           VI ACE ARKPEIAL+VYERMIHQK TPDTFT LSLIR CIWGSLWDEVELL++K A D 
Sbjct: 484 VISACEMARKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSKSAHDA 543

Query: 543 SVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRF 602
           SVYNA IQG CLRGKT+LAKKLY KMR+ GIQPDGKTRALMLQ LPKD A L+NRLASRF
Sbjct: 544 SVYNAAIQGMCLRGKTDLAKKLYTKMREIGIQPDGKTRALMLQTLPKDRAGLRNRLASRF 599

Query: 603 KKRHRHYHHR 612
           KKRHRHYHHR
Sbjct: 604 KKRHRHYHHR 599

BLAST of Sed0021178 vs. ExPASy Swiss-Prot
Match: Q84J46 (Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana OX=3702 GN=EMB2076 PE=2 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 5.4e-142
Identity = 251/461 (54.45%), Postives = 332/461 (72.02%), Query Frame = 0

Query: 129 FQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELFRSMQLA 188
           F  E+V     LE +   + +++HFLEE +   LSKR+  LSR +KVRSALELF SM+  
Sbjct: 77  FNGENVVCGLELEEKTAGDRNRIHFLEERNEETLSKRLRKLSRLDKVRSALELFDSMRFL 136

Query: 189 GLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTHGFLSAL 248
           GL P+ HA NS L+CLLRNG +     +FEFM+  ++ TGH+YSLMLKAVA+  G  SAL
Sbjct: 137 GLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSLMLKAVAEVKGCESAL 196

Query: 249 EMFKAWEREPDLKQ-FDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHITYSLLV 308
            MF+  EREP  +  FD ++YNT IS+CG+ NN  E ER WR+M+ +G   T ITYSLLV
Sbjct: 197 RMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLV 256

Query: 309 STFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQ 368
           S FVR  ++ELA+D+Y +MV N      D M A+I A +KE KWD AL++FQ MLK G +
Sbjct: 257 SIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMK 316

Query: 369 PNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYNDAIHL 428
           PN +A N LIN+LGKA +V L F +++V+KS+GH PD YTWNALL ALY ANRY D + L
Sbjct: 317 PNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQL 376

Query: 429 FEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIVIGACE 488
           F+ ++ E    LN ++YN+ ++ C KLG W++A+++L+EME SGL +S SSYN+VI ACE
Sbjct: 377 FDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACE 436

Query: 489 TARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVSVYNAV 548
            +RK ++AL VYE M  +   P+TFT+LSL+R CIWGSLWDEVE ++ K  PDVS+YNA 
Sbjct: 437 KSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVSLYNAA 496

Query: 549 IQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPK 589
           I G CLR + + AK+LY+KMR+ G++PDGKTRA+MLQNL K
Sbjct: 497 IHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537

BLAST of Sed0021178 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.9e-33
Identity = 118/428 (27.57%), Postives = 186/428 (43.46%), Query Frame = 0

Query: 166 ILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKS 225
           I +L R+  +   LE+F  M   G+  S  +  +L+    RNG  +  L + + MK+ K 
Sbjct: 148 ISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKI 207

Query: 226 STG-HSYSLMLKAVA----DTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENN 285
           S    +Y+ ++ A A    D  G L      +    +PD+     + YNT++S C     
Sbjct: 208 SPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDI-----VTYNTLLSACAIRGL 267

Query: 286 WIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQA 345
             EAE  +R M   G      TYS LV TF +  + E   D+  +M      P   +   
Sbjct: 268 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 327

Query: 346 IIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMG 405
           ++ A +K G    A+ VF  M   G  PN+  ++ L+N  G++        +F  MKS  
Sbjct: 328 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 387

Query: 406 HSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRA 465
             PD  T+N L+        + + + LF  +  EE    ++  Y  I+  C K GL + A
Sbjct: 388 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMV-EENIEPDMETYEGIIFACGKGGLHEDA 447

Query: 466 LQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRC 525
            +IL  M A+ ++ S+ +Y  VI A   A   E AL  +  M      P   T  SL+  
Sbjct: 448 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 507

Query: 526 CIWGSLWDEVELLINKFAP-----DVSVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPD 584
              G L  E E ++++        +   +NA I+     GK E A K Y+ M K+   PD
Sbjct: 508 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 567

BLAST of Sed0021178 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 9.5e-30
Identity = 107/426 (25.12%), Postives = 193/426 (45.31%), Query Frame = 0

Query: 158 DVVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIF 217
           DV   +  I  L R +++R A+ +   M   GL+P      +++   +  G LD  LRI 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247

Query: 218 EFMKSNKSSTGHSYSLMLKAVADTHGFL------SALEMFKAWEREPDLKQFDAIVYNTM 277
           E M       G S+S +   V   HGF        AL   +    +      D   +NT+
Sbjct: 248 EQM----VEFGCSWSNVSVNVI-VHGFCKEGRVEDALNFIQEMSNQDGFFP-DQYTFNTL 307

Query: 278 ISVCGKENNWIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHC 337
           ++   K  +   A     +M   G      TY+ ++S   +  + + AV++  +M+   C
Sbjct: 308 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 367

Query: 338 KPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFS 397
            P   T   +I    KE + + A  + + +   G  P+   FN+LI  L   +   +A  
Sbjct: 368 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 427

Query: 398 IFNVMKSMGHSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCC 457
           +F  M+S G  PD +T+N L+ +L    + ++A+++ + ++    A  ++  YN+++   
Sbjct: 428 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR-SVITYNTLIDGF 487

Query: 458 SKLGLWDRALQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDT 517
            K      A +I  EME  G+  ++ +YN +I     +R+ E A Q+ ++MI +   PD 
Sbjct: 488 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 547

Query: 518 FTHLSLI-RCCIWGSLWDEVELL----INKFAPDVSVYNAVIQGTCLRGKTELAKKLYMK 573
           +T+ SL+   C  G +    +++     N   PD+  Y  +I G C  G+ E+A KL   
Sbjct: 548 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 606

BLAST of Sed0021178 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-28
Identity = 99/431 (22.97%), Postives = 207/431 (48.03%), Query Frame = 0

Query: 166 ILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNK- 225
           I +L ++ +V SA  +F  +Q  G     ++  SL++    +G   + + +F+ M+ +  
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239

Query: 226 SSTGHSYSLML----KAVADTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENN 285
             T  +Y+++L    K     +   S +E  K+    P     DA  YNT+I+ C + + 
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAP-----DAYTYNTLITCCKRGSL 299

Query: 286 WIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQA 345
             EA + +  M+A G S   +TY+ L+  + +S++ + A+ +  +MV N   P   T  +
Sbjct: 300 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 359

Query: 346 IIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMG 405
           +I A +++G  D A+ +   M + G +P+   +  L++   +A +V  A SIF  M++ G
Sbjct: 360 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 419

Query: 406 HSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRA 465
             P++ T+NA +    +  ++ + + +F+ +     +  +I  +N++L    + G+    
Sbjct: 420 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP-DIVTWNTLLAVFGQNGMDSEV 479

Query: 466 LQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRC 525
             +  EM+ +G +    ++N +I A       E A+ VY RM+    TPD  T+ +++  
Sbjct: 480 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 539

Query: 526 CIWGSLWDEVELLI-----NKFAPDVSVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPD 585
              G +W++ E ++      +  P+   Y +++       +  L   L  ++    I+P 
Sbjct: 540 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP- 599

Query: 586 GKTRALMLQNL 587
              RA++L+ L
Sbjct: 600 ---RAVLLKTL 600

BLAST of Sed0021178 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.0e-28
Identity = 107/438 (24.43%), Postives = 197/438 (44.98%), Query Frame = 0

Query: 156 ETDVVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLR 215
           E D V+ +  +  L  + +V  ALEL   M   G  P+   LN+L+  L  NG + D + 
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214

Query: 216 IFEFM-KSNKSSTGHSYSLMLKAVADTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISV 275
           + + M ++       +Y  +L  +  +     A+E+ +  E E ++K  DA+ Y+ +I  
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIK-LDAVKYSIIIDG 274

Query: 276 CGKENNWIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPG 335
             K+ +   A   +  ME  G  A  ITY+ L+  F  + + +    +   M++    P 
Sbjct: 275 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 334

Query: 336 NDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFN 395
             T   +I +  KEGK   A ++ ++M++ G  PN+I +N+LI+   K   +  A  + +
Sbjct: 335 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 394

Query: 396 VMKSMGHSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKL 455
           +M S G  PD+ T+N L+     ANR +D + LF                          
Sbjct: 395 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFR------------------------- 454

Query: 456 GLWDRALQILWEMEASGLLISASSYN-IVIGACETARKPEIALQVYERMIHQKHTPDTFT 515
                      EM   G++ +  +YN +V G C++  K E+A ++++ M+ ++  PD  +
Sbjct: 455 -----------EMSLRGVIANTVTYNTLVQGFCQSG-KLEVAKKLFQEMVSRRVRPDIVS 514

Query: 516 HLSLI-RCCIWGSLWDEVELL----INKFAPDVSVYNAVIQGTCLRGKTELAKKLYMKMR 575
           +  L+   C  G L   +E+      +K   D+ +Y  +I G C   K + A  L+  + 
Sbjct: 515 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 553

Query: 576 KNGIQPDGKTRALMLQNL 587
             G++ D +   +M+  L
Sbjct: 575 LKGVKLDARAYNIMISEL 553

BLAST of Sed0021178 vs. ExPASy TrEMBL
Match: A0A1S3C9M1 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498557 PE=4 SV=1)

HSP 1 Score: 972.6 bits (2513), Expect = 7.5e-280
Identity = 488/609 (80.13%), Postives = 529/609 (86.86%), Query Frame = 0

Query: 3   VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
           VL N SPTLIL N+ +YQHDS YP     KH  Q +N  P LKSC+   I Y  N VSML
Sbjct: 4   VLGNSSPTLILLNEFNYQHDSYYPFRREDKHLRQCINVNPMLKSCMRCTIMYDGNAVSML 63

Query: 63  SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
            MS P+L+  V S R + FR GVGTLL C EDEAI +V+DE+G+E  SRE KLPPWGDM 
Sbjct: 64  PMSTPRLNLVVQSIRGMQFRTGVGTLLNCGEDEAIELVIDEEGVES-SREWKLPPWGDMT 123

Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
           ++ E  FQSEDV+  K+LEGEAL N+SKVHFLEETD V+LSKRILILSRKNKVRSALELF
Sbjct: 124 HQDEAAFQSEDVNLPKILEGEALENESKVHFLEETDKVLLSKRILILSRKNKVRSALELF 183

Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
           RSMQLAG+LP+ HALNSLLACLLRNGL  DGLRIFEFMK N+ STGH+YSL+LKAVA+ H
Sbjct: 184 RSMQLAGVLPNLHALNSLLACLLRNGLFADGLRIFEFMKLNELSTGHTYSLVLKAVANAH 243

Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
           GFLSALEMFKAWE +  L QFDAIVYNTMIS+CGK+NNW+EAERTWRLME NGC+ATHIT
Sbjct: 244 GFLSALEMFKAWEHKYVLTQFDAIVYNTMISICGKDNNWVEAERTWRLMEKNGCTATHIT 303

Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
           YSLLVSTFVR NQNELA+D YVKMVQ+  KPGNDTMQAIIGASSKEGKWDFAL VFQDML
Sbjct: 304 YSLLVSTFVRCNQNELAIDAYVKMVQSSFKPGNDTMQAIIGASSKEGKWDFALGVFQDML 363

Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
           KCG QPNS++FNALINALGKAKEVTLAFSI+NVMKSMGHSPDVYTWNALLGALY ANRYN
Sbjct: 364 KCGLQPNSVSFNALINALGKAKEVTLAFSIYNVMKSMGHSPDVYTWNALLGALYKANRYN 423

Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIV 482
           DAIHLF FVKREEKA LNIHIYN+ILMCCSKLGLW+RALQILWEME SGLLIS +SYNIV
Sbjct: 424 DAIHLFGFVKREEKAQLNIHIYNTILMCCSKLGLWERALQILWEMEVSGLLISTTSYNIV 483

Query: 483 IGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVS 542
           + ACETARKPEIALQVYERM+HQKHTPDTFTHLSLIRCCIWGSLWDEVELL+NK  PDVS
Sbjct: 484 LTACETARKPEIALQVYERMVHQKHTPDTFTHLSLIRCCIWGSLWDEVELLLNKSGPDVS 543

Query: 543 VYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRFK 602
           VYN VIQG CLRGKT+LAKKLY KMR+N IQ DGKTRALMLQNLPKDPARLKNR AS FK
Sbjct: 544 VYNVVIQGMCLRGKTDLAKKLYTKMRENSIQSDGKTRALMLQNLPKDPARLKNRWASGFK 603

Query: 603 KRHRHYHHR 612
           KR R YHHR
Sbjct: 604 KRRRRYHHR 611

BLAST of Sed0021178 vs. ExPASy TrEMBL
Match: A0A6J1JSM4 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487480 PE=4 SV=1)

HSP 1 Score: 958.0 bits (2475), Expect = 1.9e-275
Identity = 492/610 (80.66%), Postives = 533/610 (87.38%), Query Frame = 0

Query: 3   VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
           +LIN  PTLILSN+L+YQ  SCYPVSCA KHFH     IPELKSCI  RIT+G NV SM 
Sbjct: 4   LLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----VIPELKSCIRRRITHGGNVASMS 63

Query: 63  SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
           SMSIP+L+  V ST+ L FR        CEEDEAI +VVDE G+EE SRE K PPWG+++
Sbjct: 64  SMSIPRLNFVVRSTKFLEFRT-------CEEDEAISLVVDE-GVEESSREWKSPPWGEVK 123

Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
           N+ EPIFQSEDV+QS++LEGE LV+D KV+FLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 NQDEPIFQSEDVNQSEVLEGEGLVSDRKVYFLEETDEVMLSKRILILSRKNKVRSAMELF 183

Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
           RSM LAGLLPSFHA NSLLACLLRNGL DDGLRIFEFMKSNK STGH+YSL+LKAVADTH
Sbjct: 184 RSMHLAGLLPSFHASNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVADTH 243

Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
           GFLSALEMF+ WE E DLKQFDAIVYN MISVCGKENNW+EAER WRLME NGCSATH+T
Sbjct: 244 GFLSALEMFRTWEHEYDLKQFDAIVYNMMISVCGKENNWVEAERIWRLMEENGCSATHLT 303

Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
           YSLLVST+VR NQNELA+DIYVKMVQN  KP NDTMQAIIGASS+EG+WDFALRVFQ+ML
Sbjct: 304 YSLLVSTYVRCNQNELAIDIYVKMVQNCYKPANDTMQAIIGASSREGRWDFALRVFQEML 363

Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
           KCG +PNS+AFNALINALGKA EVTLAFSI+N MKSMGHSPDVYTW ALLGALY ANRYN
Sbjct: 364 KCGLEPNSVAFNALINALGKANEVTLAFSIYNRMKSMGHSPDVYTWKALLGALYKANRYN 423

Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEME-ASGLLISASSYNI 482
           DAI LFEFVKREEKA LNIHIYN++L+ CSKLGLWDRALQILWEME ASG L+SASSYNI
Sbjct: 424 DAIRLFEFVKREEKAQLNIHIYNTVLLSCSKLGLWDRALQILWEMEAASGCLVSASSYNI 483

Query: 483 VIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDV 542
           VI ACE ARKPEIAL+VYERMIHQK TPDTFT LSLIR CIWGSLWDEVELL++K A D 
Sbjct: 484 VISACEMARKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSKSAHDA 543

Query: 543 SVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRF 602
           SVYNAVIQG CLRGKT+LAKK Y KM + GIQPDGKTRALMLQ LPKD A LKNRLASRF
Sbjct: 544 SVYNAVIQGMCLRGKTDLAKKFYTKMHEIGIQPDGKTRALMLQTLPKDRAGLKNRLASRF 599

Query: 603 KKRHRHYHHR 612
           KKRHRHYHHR
Sbjct: 604 KKRHRHYHHR 599

BLAST of Sed0021178 vs. ExPASy TrEMBL
Match: A0A6J1HK91 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464311 PE=4 SV=1)

HSP 1 Score: 956.4 bits (2471), Expect = 5.6e-275
Identity = 493/610 (80.82%), Postives = 533/610 (87.38%), Query Frame = 0

Query: 3   VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
           +LIN  PTLILSN+L+YQ  SCYPVSCA KHFH     IPELKSCI  RIT+G NV SM 
Sbjct: 4   LLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----GIPELKSCIRRRITHGGNVASMS 63

Query: 63  SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
           SMSIP+L+  V ST+AL +R        CEEDEAI +VVDE G+EE SRE K PPWG+++
Sbjct: 64  SMSIPRLNFVVRSTKALEYRT-------CEEDEAIRLVVDE-GVEESSREWKSPPWGEVK 123

Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
           N+ E IFQSEDV+QS+ LEGE LV+D KV+FLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 NQDESIFQSEDVNQSEGLEGEGLVSDRKVYFLEETDEVMLSKRILILSRKNKVRSAMELF 183

Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
           RSM LAGLLPSFHA NSLLACLLRNGL DDGLRIFEFMKSNK STGH+YSL+LKAVADTH
Sbjct: 184 RSMHLAGLLPSFHASNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVADTH 243

Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
           GFLSALEMF+ WE E DLKQFDAIVYNTMISVCGKENNW+EAER WRLMEANGCS TH+T
Sbjct: 244 GFLSALEMFRTWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERIWRLMEANGCSTTHLT 303

Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
           YSLLVS +VR NQNELA+DIYVKMVQN  KP NDTMQAIIGASS+EG+WDFALRVFQDML
Sbjct: 304 YSLLVSMYVRCNQNELAIDIYVKMVQNDLKPANDTMQAIIGASSREGRWDFALRVFQDML 363

Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
           KCG +PNS+AFNALINALGKA EVTLAFSI+N MKSMGHSPDVYTW ALLGALY ANRYN
Sbjct: 364 KCGLEPNSVAFNALINALGKANEVTLAFSIYNRMKSMGHSPDVYTWKALLGALYKANRYN 423

Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEME-ASGLLISASSYNI 482
           DAI LF+FVKREEKA LNIHIYN+IL+ CSKLGLWDRALQILWEME ASG L+SASSYNI
Sbjct: 424 DAIRLFQFVKREEKAQLNIHIYNTILLSCSKLGLWDRALQILWEMEAASGRLVSASSYNI 483

Query: 483 VIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDV 542
           VI ACE A+KPEIAL+VYERMIHQK TPDTFT LSLIR CIWGSLWDEVELL++K A D 
Sbjct: 484 VISACEMAKKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSKSAHDA 543

Query: 543 SVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRF 602
           SVYNAVIQG CLRGKT+LAKKLY KMRK GIQPDGKTRALMLQ LPKD A LKNRLASRF
Sbjct: 544 SVYNAVIQGMCLRGKTDLAKKLYTKMRKIGIQPDGKTRALMLQTLPKDRAGLKNRLASRF 599

Query: 603 KKRHRHYHHR 612
           KKRHRHY HR
Sbjct: 604 KKRHRHYRHR 599

BLAST of Sed0021178 vs. ExPASy TrEMBL
Match: A0A6J1JQP6 (pentatricopeptide repeat-containing protein At3g29290 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487480 PE=4 SV=1)

HSP 1 Score: 952.2 bits (2460), Expect = 1.1e-273
Identity = 491/610 (80.49%), Postives = 532/610 (87.21%), Query Frame = 0

Query: 3   VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
           +LIN  PTLILSN+L+YQ  SCYPVSCA KHFH     IPELKSCI  RIT+G NV SM 
Sbjct: 4   LLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----VIPELKSCIRRRITHGGNVASMS 63

Query: 63  SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
           SMSIP+L+  V ST+ L FR        CEEDEAI +VVDE G+EE SRE K PPWG+++
Sbjct: 64  SMSIPRLNFVVRSTKFLEFRT-------CEEDEAISLVVDE-GVEESSREWKSPPWGEVK 123

Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
           N+ EPIFQSEDV+QS++LEGE LV+D KV+FLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 NQDEPIFQSEDVNQSEVLEGEGLVSDRKVYFLEETDEVMLSKRILILSRKNKVRSAMELF 183

Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
           RSM LAGLLPSFHA NSLLACLLRNGL DDGLRIFEFMKSNK STGH+YSL+LKAVADTH
Sbjct: 184 RSMHLAGLLPSFHASNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVADTH 243

Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
           GFLSALEMF+ WE E DLKQFDAIVYN MISVCGKENNW+EAER WRLME NGCSATH+T
Sbjct: 244 GFLSALEMFRTWEHEYDLKQFDAIVYNMMISVCGKENNWVEAERIWRLMEENGCSATHLT 303

Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
           YSLLVST+VR NQNELA+DIYVKMVQN  KP NDTMQAIIGASS+EG+WDFALRVFQ+ML
Sbjct: 304 YSLLVSTYVRCNQNELAIDIYVKMVQNCYKPANDTMQAIIGASSREGRWDFALRVFQEML 363

Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
           KCG +PNS+AFNALINALGKA EVTLAFSI+N MKSMGHSPDVYTW ALLGALY ANRYN
Sbjct: 364 KCGLEPNSVAFNALINALGKANEVTLAFSIYNRMKSMGHSPDVYTWKALLGALYKANRYN 423

Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEME-ASGLLISASSYNI 482
           DAI LFEFVKREEKA LNIHIYN++L+ CSKLGLWDRALQILWEME ASG L+SASSYNI
Sbjct: 424 DAIRLFEFVKREEKAQLNIHIYNTVLLSCSKLGLWDRALQILWEMEAASGCLVSASSYNI 483

Query: 483 VIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDV 542
           VI ACE ARKPEIAL+VYERMIHQK TPDTFT LSLIR CIWGSLWDEVELL++  A D 
Sbjct: 484 VISACEMARKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSS-AHDA 543

Query: 543 SVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRF 602
           SVYNAVIQG CLRGKT+LAKK Y KM + GIQPDGKTRALMLQ LPKD A LKNRLASRF
Sbjct: 544 SVYNAVIQGMCLRGKTDLAKKFYTKMHEIGIQPDGKTRALMLQTLPKDRAGLKNRLASRF 598

Query: 603 KKRHRHYHHR 612
           KKRHRHYHHR
Sbjct: 604 KKRHRHYHHR 598

BLAST of Sed0021178 vs. ExPASy TrEMBL
Match: A0A6J1BY07 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006743 PE=4 SV=1)

HSP 1 Score: 951.4 bits (2458), Expect = 1.8e-273
Identity = 473/608 (77.80%), Postives = 524/608 (86.18%), Query Frame = 0

Query: 3   VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
           VLINPSPTL+LSN+L+YQ DS YPV+ A +  HQ  N    LKS +   I Y  NV+SML
Sbjct: 4   VLINPSPTLLLSNELNYQQDSYYPVTYAHRLLHQCRNVNSFLKSRMRCSIIYRGNVISML 63

Query: 63  SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
           SMS+P+L+  + STRA+ F  GVGTLL CEEDEAI +V DE+G+E  S E K PPWGD+ 
Sbjct: 64  SMSVPRLNLVIRSTRAMEFSTGVGTLLNCEEDEAIELVTDEEGLE--SFEWKSPPWGDIV 123

Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
              E  FQSED +Q +MLE EA +N SKVHFLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 KHDESSFQSEDTNQPRMLEAEAFINGSKVHFLEETDEVMLSKRILILSRKNKVRSAMELF 183

Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
           RSMQLAGLLPS HALNSLLACLLRN L DDGLRIF  MK+NK STGH+YSL+LKAVAD  
Sbjct: 184 RSMQLAGLLPSLHALNSLLACLLRNELFDDGLRIFALMKTNKLSTGHTYSLILKAVADAR 243

Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
           GFLSALEMFKAWE+E D+K FD IVYNTMISVCGKENNW+EAERTWRLMEANGC AT IT
Sbjct: 244 GFLSALEMFKAWEQEYDVKHFDPIVYNTMISVCGKENNWVEAERTWRLMEANGCGATRIT 303

Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
           Y LLVSTFVR  QNELA+D YVKMVQNH KPGNDTMQ IIGAS KEGKWDFALRVF+DML
Sbjct: 304 YCLLVSTFVRCKQNELAIDTYVKMVQNHFKPGNDTMQTIIGASLKEGKWDFALRVFEDML 363

Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
           KCG QPNS+AFNALI+ALGKAK+VTLAF+++N+MKSMGH PD YTWNALLG+LY ANRYN
Sbjct: 364 KCGLQPNSVAFNALIHALGKAKKVTLAFNVYNMMKSMGHPPDAYTWNALLGSLYEANRYN 423

Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIV 482
           DAI LFEFVKRE+K  LNIH+YN+ILM CSKLGLWDR +QILWEMEASGLLIS +SYNIV
Sbjct: 424 DAIRLFEFVKREDKPQLNIHVYNTILMSCSKLGLWDRTIQILWEMEASGLLISTASYNIV 483

Query: 483 IGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVS 542
           I ACE ARKP+IALQVYERMIHQKHTPDTFTHLSL+RCCIWGSLWDEVE+L+NK AP+VS
Sbjct: 484 ISACEMARKPKIALQVYERMIHQKHTPDTFTHLSLVRCCIWGSLWDEVEVLLNKSAPNVS 543

Query: 543 VYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRFK 602
           VYNAVIQG CLRGKT+LAK+LY KMR+NGIQ DGKTRALMLQNLPKDPAR  NR ASRF+
Sbjct: 544 VYNAVIQGMCLRGKTDLAKRLYSKMRENGIQADGKTRALMLQNLPKDPARFNNRWASRFR 603

Query: 603 KRHRHYHH 611
           KR+RHYHH
Sbjct: 604 KRNRHYHH 609

BLAST of Sed0021178 vs. TAIR 10
Match: AT3G29290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 506.1 bits (1302), Expect = 3.8e-143
Identity = 251/461 (54.45%), Postives = 332/461 (72.02%), Query Frame = 0

Query: 129 FQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELFRSMQLA 188
           F  E+V     LE +   + +++HFLEE +   LSKR+  LSR +KVRSALELF SM+  
Sbjct: 77  FNGENVVCGLELEEKTAGDRNRIHFLEERNEETLSKRLRKLSRLDKVRSALELFDSMRFL 136

Query: 189 GLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTHGFLSAL 248
           GL P+ HA NS L+CLLRNG +     +FEFM+  ++ TGH+YSLMLKAVA+  G  SAL
Sbjct: 137 GLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSLMLKAVAEVKGCESAL 196

Query: 249 EMFKAWEREPDLKQ-FDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHITYSLLV 308
            MF+  EREP  +  FD ++YNT IS+CG+ NN  E ER WR+M+ +G   T ITYSLLV
Sbjct: 197 RMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLV 256

Query: 309 STFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQ 368
           S FVR  ++ELA+D+Y +MV N      D M A+I A +KE KWD AL++FQ MLK G +
Sbjct: 257 SIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMK 316

Query: 369 PNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYNDAIHL 428
           PN +A N LIN+LGKA +V L F +++V+KS+GH PD YTWNALL ALY ANRY D + L
Sbjct: 317 PNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQL 376

Query: 429 FEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIVIGACE 488
           F+ ++ E    LN ++YN+ ++ C KLG W++A+++L+EME SGL +S SSYN+VI ACE
Sbjct: 377 FDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACE 436

Query: 489 TARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVSVYNAV 548
            +RK ++AL VYE M  +   P+TFT+LSL+R CIWGSLWDEVE ++ K  PDVS+YNA 
Sbjct: 437 KSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVSLYNAA 496

Query: 549 IQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPK 589
           I G CLR + + AK+LY+KMR+ G++PDGKTRA+MLQNL K
Sbjct: 497 IHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537

BLAST of Sed0021178 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 145.6 bits (366), Expect = 1.3e-34
Identity = 118/428 (27.57%), Postives = 186/428 (43.46%), Query Frame = 0

Query: 166 ILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKS 225
           I +L R+  +   LE+F  M   G+  S  +  +L+    RNG  +  L + + MK+ K 
Sbjct: 148 ISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKI 207

Query: 226 STG-HSYSLMLKAVA----DTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENN 285
           S    +Y+ ++ A A    D  G L      +    +PD+     + YNT++S C     
Sbjct: 208 SPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDI-----VTYNTLLSACAIRGL 267

Query: 286 WIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQA 345
             EAE  +R M   G      TYS LV TF +  + E   D+  +M      P   +   
Sbjct: 268 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 327

Query: 346 IIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMG 405
           ++ A +K G    A+ VF  M   G  PN+  ++ L+N  G++        +F  MKS  
Sbjct: 328 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 387

Query: 406 HSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRA 465
             PD  T+N L+        + + + LF  +  EE    ++  Y  I+  C K GL + A
Sbjct: 388 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMV-EENIEPDMETYEGIIFACGKGGLHEDA 447

Query: 466 LQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRC 525
            +IL  M A+ ++ S+ +Y  VI A   A   E AL  +  M      P   T  SL+  
Sbjct: 448 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 507

Query: 526 CIWGSLWDEVELLINKFAP-----DVSVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPD 584
              G L  E E ++++        +   +NA I+     GK E A K Y+ M K+   PD
Sbjct: 508 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 567

BLAST of Sed0021178 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 6.8e-31
Identity = 107/426 (25.12%), Postives = 193/426 (45.31%), Query Frame = 0

Query: 158 DVVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIF 217
           DV   +  I  L R +++R A+ +   M   GL+P      +++   +  G LD  LRI 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247

Query: 218 EFMKSNKSSTGHSYSLMLKAVADTHGFL------SALEMFKAWEREPDLKQFDAIVYNTM 277
           E M       G S+S +   V   HGF        AL   +    +      D   +NT+
Sbjct: 248 EQM----VEFGCSWSNVSVNVI-VHGFCKEGRVEDALNFIQEMSNQDGFFP-DQYTFNTL 307

Query: 278 ISVCGKENNWIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHC 337
           ++   K  +   A     +M   G      TY+ ++S   +  + + AV++  +M+   C
Sbjct: 308 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 367

Query: 338 KPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFS 397
            P   T   +I    KE + + A  + + +   G  P+   FN+LI  L   +   +A  
Sbjct: 368 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 427

Query: 398 IFNVMKSMGHSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCC 457
           +F  M+S G  PD +T+N L+ +L    + ++A+++ + ++    A  ++  YN+++   
Sbjct: 428 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR-SVITYNTLIDGF 487

Query: 458 SKLGLWDRALQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDT 517
            K      A +I  EME  G+  ++ +YN +I     +R+ E A Q+ ++MI +   PD 
Sbjct: 488 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 547

Query: 518 FTHLSLI-RCCIWGSLWDEVELL----INKFAPDVSVYNAVIQGTCLRGKTELAKKLYMK 573
           +T+ SL+   C  G +    +++     N   PD+  Y  +I G C  G+ E+A KL   
Sbjct: 548 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 606

BLAST of Sed0021178 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 9.8e-30
Identity = 99/431 (22.97%), Postives = 207/431 (48.03%), Query Frame = 0

Query: 166 ILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNK- 225
           I +L ++ +V SA  +F  +Q  G     ++  SL++    +G   + + +F+ M+ +  
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239

Query: 226 SSTGHSYSLML----KAVADTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENN 285
             T  +Y+++L    K     +   S +E  K+    P     DA  YNT+I+ C + + 
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAP-----DAYTYNTLITCCKRGSL 299

Query: 286 WIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQA 345
             EA + +  M+A G S   +TY+ L+  + +S++ + A+ +  +MV N   P   T  +
Sbjct: 300 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 359

Query: 346 IIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMG 405
           +I A +++G  D A+ +   M + G +P+   +  L++   +A +V  A SIF  M++ G
Sbjct: 360 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 419

Query: 406 HSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRA 465
             P++ T+NA +    +  ++ + + +F+ +     +  +I  +N++L    + G+    
Sbjct: 420 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP-DIVTWNTLLAVFGQNGMDSEV 479

Query: 466 LQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRC 525
             +  EM+ +G +    ++N +I A       E A+ VY RM+    TPD  T+ +++  
Sbjct: 480 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 539

Query: 526 CIWGSLWDEVELLI-----NKFAPDVSVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPD 585
              G +W++ E ++      +  P+   Y +++       +  L   L  ++    I+P 
Sbjct: 540 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP- 599

Query: 586 GKTRALMLQNL 587
              RA++L+ L
Sbjct: 600 ---RAVLLKTL 600

BLAST of Sed0021178 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 2.8e-29
Identity = 107/438 (24.43%), Postives = 197/438 (44.98%), Query Frame = 0

Query: 156 ETDVVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLR 215
           E D V+ +  +  L  + +V  ALEL   M   G  P+   LN+L+  L  NG + D + 
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214

Query: 216 IFEFM-KSNKSSTGHSYSLMLKAVADTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISV 275
           + + M ++       +Y  +L  +  +     A+E+ +  E E ++K  DA+ Y+ +I  
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIK-LDAVKYSIIIDG 274

Query: 276 CGKENNWIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPG 335
             K+ +   A   +  ME  G  A  ITY+ L+  F  + + +    +   M++    P 
Sbjct: 275 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 334

Query: 336 NDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFN 395
             T   +I +  KEGK   A ++ ++M++ G  PN+I +N+LI+   K   +  A  + +
Sbjct: 335 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 394

Query: 396 VMKSMGHSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKL 455
           +M S G  PD+ T+N L+     ANR +D + LF                          
Sbjct: 395 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFR------------------------- 454

Query: 456 GLWDRALQILWEMEASGLLISASSYN-IVIGACETARKPEIALQVYERMIHQKHTPDTFT 515
                      EM   G++ +  +YN +V G C++  K E+A ++++ M+ ++  PD  +
Sbjct: 455 -----------EMSLRGVIANTVTYNTLVQGFCQSG-KLEVAKKLFQEMVSRRVRPDIVS 514

Query: 516 HLSLI-RCCIWGSLWDEVELL----INKFAPDVSVYNAVIQGTCLRGKTELAKKLYMKMR 575
           +  L+   C  G L   +E+      +K   D+ +Y  +I G C   K + A  L+  + 
Sbjct: 515 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 553

Query: 576 KNGIQPDGKTRALMLQNL 587
             G++ D +   +M+  L
Sbjct: 575 LKGVKLDARAYNIMISEL 553

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038891011.13.8e-28682.34pentatricopeptide repeat-containing protein At3g29290 [Benincasa hispida] >XP_03... [more]
XP_008459413.11.6e-27980.13PREDICTED: pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cuc... [more]
XP_022990659.14.0e-27580.66pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cucurbita maxi... [more]
XP_022964230.11.2e-27480.82pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cucurbita mosc... [more]
XP_023525691.12.6e-27480.49pentatricopeptide repeat-containing protein At3g29290 [Cucurbita pepo subsp. pep... [more]
Match NameE-valueIdentityDescription
Q84J465.4e-14254.45Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana OX... [more]
Q9S7Q21.9e-3327.57Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... [more]
Q9LFF19.5e-3025.12Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Q9LYZ91.4e-2822.97Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
Q9LPX24.0e-2824.43Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A1S3C9M17.5e-28080.13pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucumis melo... [more]
A0A6J1JSM41.9e-27580.66pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucurbita ma... [more]
A0A6J1HK915.6e-27580.82pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucurbita mo... [more]
A0A6J1JQP61.1e-27380.49pentatricopeptide repeat-containing protein At3g29290 isoform X2 OS=Cucurbita ma... [more]
A0A6J1BY071.8e-27377.80pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Momordica ch... [more]
Match NameE-valueIdentityDescription
AT3G29290.13.8e-14354.45Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G74850.11.3e-3427.57plastid transcriptionally active 2 [more]
AT3G53700.16.8e-3125.12Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G02860.19.8e-3022.97Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12775.12.8e-2924.43Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 418..524
e-value: 5.7E-24
score: 86.4
coord: 525..606
e-value: 1.9E-9
score: 39.1
coord: 341..417
e-value: 7.0E-22
score: 79.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 227..340
e-value: 2.4E-17
score: 65.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 131..226
e-value: 3.8E-7
score: 31.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 368..415
e-value: 8.8E-12
score: 45.0
coord: 264..310
e-value: 1.4E-7
score: 31.6
coord: 539..586
e-value: 5.1E-11
score: 42.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 340..366
e-value: 0.0028
score: 17.8
coord: 169..189
e-value: 1.1
score: 9.6
coord: 478..503
e-value: 0.015
score: 15.5
coord: 443..472
e-value: 2.8E-5
score: 24.0
coord: 197..223
e-value: 0.0058
score: 16.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 372..405
e-value: 5.0E-8
score: 30.6
coord: 543..575
e-value: 8.6E-7
score: 26.8
coord: 443..474
e-value: 4.0E-4
score: 18.4
coord: 266..298
e-value: 2.9E-8
score: 31.4
coord: 340..369
e-value: 2.3E-5
score: 22.3
coord: 197..224
e-value: 0.0015
score: 16.6
coord: 478..511
e-value: 6.7E-5
score: 20.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 440..474
score: 10.610596
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 540..574
score: 11.99172
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 475..509
score: 9.766576
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 334..368
score: 9.985802
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 369..403
score: 10.906551
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 264..298
score: 10.972319
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 404..434
score: 8.758137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 299..333
score: 9.415814
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 116..589
NoneNo IPR availablePANTHERPTHR47938:SF16PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 116..589
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 254..464

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0021178.1Sed0021178.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding