Homology
BLAST of Sed0021178 vs. NCBI nr
Match:
XP_038891011.1 (pentatricopeptide repeat-containing protein At3g29290 [Benincasa hispida] >XP_038891012.1 pentatricopeptide repeat-containing protein At3g29290 [Benincasa hispida])
HSP 1 Score: 994.6 bits (2570), Expect = 3.8e-286
Identity = 499/606 (82.34%), Postives = 532/606 (87.79%), Query Frame = 0
Query: 6 NPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSMLSMS 65
NPSPTLIL N+ YQHDS YP S +K +N P KSCI ITY N VSML MS
Sbjct: 7 NPSPTLILLNEFHYQHDSYYPFSWTEKRLRPCINVNPVSKSCIRCTITYKGNAVSMLLMS 66
Query: 66 IPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDMENRY 125
P+L+ V STR + FR VGTLL C EDEAI +V+DE+G+ E SRE KLPPWGDM ++
Sbjct: 67 TPRLNLMVQSTRGMEFRTCVGTLLNCGEDEAIDLVIDEEGVGESSREWKLPPWGDMAHQD 126
Query: 126 EPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELFRSM 185
EP FQSED +QSK+LEGE L NDSKVHFLEETD VMLSKR+LILSRKNKVRSALELFRS+
Sbjct: 127 EPTFQSEDANQSKILEGEPLENDSKVHFLEETDKVMLSKRLLILSRKNKVRSALELFRSL 186
Query: 186 QLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTHGFL 245
QLA LLPS HALNSLLACLLR GL DDGLRIFEFMKSN+ TGH+YSL+LKAVA+ HGFL
Sbjct: 187 QLAALLPSLHALNSLLACLLRKGLFDDGLRIFEFMKSNELLTGHTYSLVLKAVANAHGFL 246
Query: 246 SALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHITYSL 305
SALEMFKAWE + DL QFDA+VYNTMIS+CGK+NNW+EAERTWRLME NGCSATHITY+L
Sbjct: 247 SALEMFKAWEHKYDLTQFDAVVYNTMISICGKDNNWVEAERTWRLMEENGCSATHITYTL 306
Query: 306 LVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCG 365
LVSTFVR NQNELA+D YVKMVQN KPGNDTMQAIIGASSKEGKWDFALRVF DMLKCG
Sbjct: 307 LVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQAIIGASSKEGKWDFALRVFHDMLKCG 366
Query: 366 FQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYNDAI 425
QPNS+AFNALINALG AKEVTLAFSI+NVMKSMGHSPDVYTWNALLGALY ANRYNDAI
Sbjct: 367 LQPNSVAFNALINALGNAKEVTLAFSIYNVMKSMGHSPDVYTWNALLGALYKANRYNDAI 426
Query: 426 HLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIVIGA 485
HLFEFVKR EKA LNIHIYN+ILM CSKLGLWDRALQILWEMEASGL ISASSYNIVI A
Sbjct: 427 HLFEFVKR-EKAQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLAISASSYNIVITA 486
Query: 486 CETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVSVYN 545
CE ARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELL+NK APDVSVYN
Sbjct: 487 CEMARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLLNKSAPDVSVYN 546
Query: 546 AVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRFKKRH 605
AVIQG CLRGKT+LAKKLY KMR+NGIQPDGKTRALMLQNLPKDPARLKNR AS FKKRH
Sbjct: 547 AVIQGMCLRGKTDLAKKLYTKMRENGIQPDGKTRALMLQNLPKDPARLKNRWASGFKKRH 606
Query: 606 RHYHHR 612
RHYHHR
Sbjct: 607 RHYHHR 611
BLAST of Sed0021178 vs. NCBI nr
Match:
XP_008459413.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cucumis melo])
HSP 1 Score: 972.6 bits (2513), Expect = 1.6e-279
Identity = 488/609 (80.13%), Postives = 529/609 (86.86%), Query Frame = 0
Query: 3 VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
VL N SPTLIL N+ +YQHDS YP KH Q +N P LKSC+ I Y N VSML
Sbjct: 4 VLGNSSPTLILLNEFNYQHDSYYPFRREDKHLRQCINVNPMLKSCMRCTIMYDGNAVSML 63
Query: 63 SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
MS P+L+ V S R + FR GVGTLL C EDEAI +V+DE+G+E SRE KLPPWGDM
Sbjct: 64 PMSTPRLNLVVQSIRGMQFRTGVGTLLNCGEDEAIELVIDEEGVES-SREWKLPPWGDMT 123
Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
++ E FQSEDV+ K+LEGEAL N+SKVHFLEETD V+LSKRILILSRKNKVRSALELF
Sbjct: 124 HQDEAAFQSEDVNLPKILEGEALENESKVHFLEETDKVLLSKRILILSRKNKVRSALELF 183
Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
RSMQLAG+LP+ HALNSLLACLLRNGL DGLRIFEFMK N+ STGH+YSL+LKAVA+ H
Sbjct: 184 RSMQLAGVLPNLHALNSLLACLLRNGLFADGLRIFEFMKLNELSTGHTYSLVLKAVANAH 243
Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
GFLSALEMFKAWE + L QFDAIVYNTMIS+CGK+NNW+EAERTWRLME NGC+ATHIT
Sbjct: 244 GFLSALEMFKAWEHKYVLTQFDAIVYNTMISICGKDNNWVEAERTWRLMEKNGCTATHIT 303
Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
YSLLVSTFVR NQNELA+D YVKMVQ+ KPGNDTMQAIIGASSKEGKWDFAL VFQDML
Sbjct: 304 YSLLVSTFVRCNQNELAIDAYVKMVQSSFKPGNDTMQAIIGASSKEGKWDFALGVFQDML 363
Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
KCG QPNS++FNALINALGKAKEVTLAFSI+NVMKSMGHSPDVYTWNALLGALY ANRYN
Sbjct: 364 KCGLQPNSVSFNALINALGKAKEVTLAFSIYNVMKSMGHSPDVYTWNALLGALYKANRYN 423
Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIV 482
DAIHLF FVKREEKA LNIHIYN+ILMCCSKLGLW+RALQILWEME SGLLIS +SYNIV
Sbjct: 424 DAIHLFGFVKREEKAQLNIHIYNTILMCCSKLGLWERALQILWEMEVSGLLISTTSYNIV 483
Query: 483 IGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVS 542
+ ACETARKPEIALQVYERM+HQKHTPDTFTHLSLIRCCIWGSLWDEVELL+NK PDVS
Sbjct: 484 LTACETARKPEIALQVYERMVHQKHTPDTFTHLSLIRCCIWGSLWDEVELLLNKSGPDVS 543
Query: 543 VYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRFK 602
VYN VIQG CLRGKT+LAKKLY KMR+N IQ DGKTRALMLQNLPKDPARLKNR AS FK
Sbjct: 544 VYNVVIQGMCLRGKTDLAKKLYTKMRENSIQSDGKTRALMLQNLPKDPARLKNRWASGFK 603
Query: 603 KRHRHYHHR 612
KR R YHHR
Sbjct: 604 KRRRRYHHR 611
BLAST of Sed0021178 vs. NCBI nr
Match:
XP_022990659.1 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cucurbita maxima])
HSP 1 Score: 958.0 bits (2475), Expect = 4.0e-275
Identity = 492/610 (80.66%), Postives = 533/610 (87.38%), Query Frame = 0
Query: 3 VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
+LIN PTLILSN+L+YQ SCYPVSCA KHFH IPELKSCI RIT+G NV SM
Sbjct: 4 LLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----VIPELKSCIRRRITHGGNVASMS 63
Query: 63 SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
SMSIP+L+ V ST+ L FR CEEDEAI +VVDE G+EE SRE K PPWG+++
Sbjct: 64 SMSIPRLNFVVRSTKFLEFRT-------CEEDEAISLVVDE-GVEESSREWKSPPWGEVK 123
Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
N+ EPIFQSEDV+QS++LEGE LV+D KV+FLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 NQDEPIFQSEDVNQSEVLEGEGLVSDRKVYFLEETDEVMLSKRILILSRKNKVRSAMELF 183
Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
RSM LAGLLPSFHA NSLLACLLRNGL DDGLRIFEFMKSNK STGH+YSL+LKAVADTH
Sbjct: 184 RSMHLAGLLPSFHASNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVADTH 243
Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
GFLSALEMF+ WE E DLKQFDAIVYN MISVCGKENNW+EAER WRLME NGCSATH+T
Sbjct: 244 GFLSALEMFRTWEHEYDLKQFDAIVYNMMISVCGKENNWVEAERIWRLMEENGCSATHLT 303
Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
YSLLVST+VR NQNELA+DIYVKMVQN KP NDTMQAIIGASS+EG+WDFALRVFQ+ML
Sbjct: 304 YSLLVSTYVRCNQNELAIDIYVKMVQNCYKPANDTMQAIIGASSREGRWDFALRVFQEML 363
Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
KCG +PNS+AFNALINALGKA EVTLAFSI+N MKSMGHSPDVYTW ALLGALY ANRYN
Sbjct: 364 KCGLEPNSVAFNALINALGKANEVTLAFSIYNRMKSMGHSPDVYTWKALLGALYKANRYN 423
Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEME-ASGLLISASSYNI 482
DAI LFEFVKREEKA LNIHIYN++L+ CSKLGLWDRALQILWEME ASG L+SASSYNI
Sbjct: 424 DAIRLFEFVKREEKAQLNIHIYNTVLLSCSKLGLWDRALQILWEMEAASGCLVSASSYNI 483
Query: 483 VIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDV 542
VI ACE ARKPEIAL+VYERMIHQK TPDTFT LSLIR CIWGSLWDEVELL++K A D
Sbjct: 484 VISACEMARKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSKSAHDA 543
Query: 543 SVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRF 602
SVYNAVIQG CLRGKT+LAKK Y KM + GIQPDGKTRALMLQ LPKD A LKNRLASRF
Sbjct: 544 SVYNAVIQGMCLRGKTDLAKKFYTKMHEIGIQPDGKTRALMLQTLPKDRAGLKNRLASRF 599
Query: 603 KKRHRHYHHR 612
KKRHRHYHHR
Sbjct: 604 KKRHRHYHHR 599
BLAST of Sed0021178 vs. NCBI nr
Match:
XP_022964230.1 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cucurbita moschata])
HSP 1 Score: 956.4 bits (2471), Expect = 1.2e-274
Identity = 493/610 (80.82%), Postives = 533/610 (87.38%), Query Frame = 0
Query: 3 VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
+LIN PTLILSN+L+YQ SCYPVSCA KHFH IPELKSCI RIT+G NV SM
Sbjct: 4 LLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----GIPELKSCIRRRITHGGNVASMS 63
Query: 63 SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
SMSIP+L+ V ST+AL +R CEEDEAI +VVDE G+EE SRE K PPWG+++
Sbjct: 64 SMSIPRLNFVVRSTKALEYRT-------CEEDEAIRLVVDE-GVEESSREWKSPPWGEVK 123
Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
N+ E IFQSEDV+QS+ LEGE LV+D KV+FLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 NQDESIFQSEDVNQSEGLEGEGLVSDRKVYFLEETDEVMLSKRILILSRKNKVRSAMELF 183
Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
RSM LAGLLPSFHA NSLLACLLRNGL DDGLRIFEFMKSNK STGH+YSL+LKAVADTH
Sbjct: 184 RSMHLAGLLPSFHASNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVADTH 243
Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
GFLSALEMF+ WE E DLKQFDAIVYNTMISVCGKENNW+EAER WRLMEANGCS TH+T
Sbjct: 244 GFLSALEMFRTWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERIWRLMEANGCSTTHLT 303
Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
YSLLVS +VR NQNELA+DIYVKMVQN KP NDTMQAIIGASS+EG+WDFALRVFQDML
Sbjct: 304 YSLLVSMYVRCNQNELAIDIYVKMVQNDLKPANDTMQAIIGASSREGRWDFALRVFQDML 363
Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
KCG +PNS+AFNALINALGKA EVTLAFSI+N MKSMGHSPDVYTW ALLGALY ANRYN
Sbjct: 364 KCGLEPNSVAFNALINALGKANEVTLAFSIYNRMKSMGHSPDVYTWKALLGALYKANRYN 423
Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEME-ASGLLISASSYNI 482
DAI LF+FVKREEKA LNIHIYN+IL+ CSKLGLWDRALQILWEME ASG L+SASSYNI
Sbjct: 424 DAIRLFQFVKREEKAQLNIHIYNTILLSCSKLGLWDRALQILWEMEAASGRLVSASSYNI 483
Query: 483 VIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDV 542
VI ACE A+KPEIAL+VYERMIHQK TPDTFT LSLIR CIWGSLWDEVELL++K A D
Sbjct: 484 VISACEMAKKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSKSAHDA 543
Query: 543 SVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRF 602
SVYNAVIQG CLRGKT+LAKKLY KMRK GIQPDGKTRALMLQ LPKD A LKNRLASRF
Sbjct: 544 SVYNAVIQGMCLRGKTDLAKKLYTKMRKIGIQPDGKTRALMLQTLPKDRAGLKNRLASRF 599
Query: 603 KKRHRHYHHR 612
KKRHRHY HR
Sbjct: 604 KKRHRHYRHR 599
BLAST of Sed0021178 vs. NCBI nr
Match:
XP_023525691.1 (pentatricopeptide repeat-containing protein At3g29290 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 955.3 bits (2468), Expect = 2.6e-274
Identity = 491/610 (80.49%), Postives = 532/610 (87.21%), Query Frame = 0
Query: 3 VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
+LIN PTLILSN+L+YQ SCYPVSCA KHFH IPELKSCI RIT+G NV SM
Sbjct: 4 LLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----VIPELKSCIRRRITHGGNVASMS 63
Query: 63 SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
SMSIP+L+ V ST+AL FR CEED+AI +VVD DG+EE SRE K PPWG+++
Sbjct: 64 SMSIPRLNFVVRSTKALEFRT-------CEEDDAIRLVVD-DGVEESSREWKSPPWGEVK 123
Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
N+ EPIFQSEDV+QS++LEGE L +D KV+FLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 NQDEPIFQSEDVNQSEVLEGEGLGSDRKVYFLEETDEVMLSKRILILSRKNKVRSAMELF 183
Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
RSM LAGLLPSFHA NSLLACLLRNG DDGLRIFEFMKSNK STGH+YSL+LKAVADTH
Sbjct: 184 RSMHLAGLLPSFHASNSLLACLLRNGPFDDGLRIFEFMKSNKLSTGHTYSLILKAVADTH 243
Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
GFLSALEMF+ WE E DLKQFDAIVYNTMISVCGKENNW+EAER WRLMEANGCSATH+T
Sbjct: 244 GFLSALEMFRTWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERIWRLMEANGCSATHLT 303
Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
YSLLVS +VR NQNELA+DIYVKMVQN KP NDTMQAIIGASS+EG+WDFALRVFQDML
Sbjct: 304 YSLLVSMYVRCNQNELAIDIYVKMVQNDLKPANDTMQAIIGASSREGRWDFALRVFQDML 363
Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
KCG +PNS+AFN LINALGKA EVTLAFSI+N MK MGHSPDVYTW ALLGALY ANRYN
Sbjct: 364 KCGLEPNSVAFNTLINALGKANEVTLAFSIYNRMKPMGHSPDVYTWKALLGALYKANRYN 423
Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEME-ASGLLISASSYNI 482
DAI LFEFVKREEKA LNIHIYN+IL+ CSKLGLWDRALQILWEME ASG L+SASSYNI
Sbjct: 424 DAIRLFEFVKREEKAQLNIHIYNTILLSCSKLGLWDRALQILWEMEAASGRLVSASSYNI 483
Query: 483 VIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDV 542
VI ACE ARKPEIAL+VYERMIHQK TPDTFT LSLIR CIWGSLWDEVELL++K A D
Sbjct: 484 VISACEMARKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSKSAHDA 543
Query: 543 SVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRF 602
SVYNA IQG CLRGKT+LAKKLY KMR+ GIQPDGKTRALMLQ LPKD A L+NRLASRF
Sbjct: 544 SVYNAAIQGMCLRGKTDLAKKLYTKMREIGIQPDGKTRALMLQTLPKDRAGLRNRLASRF 599
Query: 603 KKRHRHYHHR 612
KKRHRHYHHR
Sbjct: 604 KKRHRHYHHR 599
BLAST of Sed0021178 vs. ExPASy Swiss-Prot
Match:
Q84J46 (Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana OX=3702 GN=EMB2076 PE=2 SV=1)
HSP 1 Score: 506.1 bits (1302), Expect = 5.4e-142
Identity = 251/461 (54.45%), Postives = 332/461 (72.02%), Query Frame = 0
Query: 129 FQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELFRSMQLA 188
F E+V LE + + +++HFLEE + LSKR+ LSR +KVRSALELF SM+
Sbjct: 77 FNGENVVCGLELEEKTAGDRNRIHFLEERNEETLSKRLRKLSRLDKVRSALELFDSMRFL 136
Query: 189 GLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTHGFLSAL 248
GL P+ HA NS L+CLLRNG + +FEFM+ ++ TGH+YSLMLKAVA+ G SAL
Sbjct: 137 GLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSLMLKAVAEVKGCESAL 196
Query: 249 EMFKAWEREPDLKQ-FDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHITYSLLV 308
MF+ EREP + FD ++YNT IS+CG+ NN E ER WR+M+ +G T ITYSLLV
Sbjct: 197 RMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLV 256
Query: 309 STFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQ 368
S FVR ++ELA+D+Y +MV N D M A+I A +KE KWD AL++FQ MLK G +
Sbjct: 257 SIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMK 316
Query: 369 PNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYNDAIHL 428
PN +A N LIN+LGKA +V L F +++V+KS+GH PD YTWNALL ALY ANRY D + L
Sbjct: 317 PNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQL 376
Query: 429 FEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIVIGACE 488
F+ ++ E LN ++YN+ ++ C KLG W++A+++L+EME SGL +S SSYN+VI ACE
Sbjct: 377 FDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACE 436
Query: 489 TARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVSVYNAV 548
+RK ++AL VYE M + P+TFT+LSL+R CIWGSLWDEVE ++ K PDVS+YNA
Sbjct: 437 KSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVSLYNAA 496
Query: 549 IQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPK 589
I G CLR + + AK+LY+KMR+ G++PDGKTRA+MLQNL K
Sbjct: 497 IHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
BLAST of Sed0021178 vs. ExPASy Swiss-Prot
Match:
Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)
HSP 1 Score: 145.6 bits (366), Expect = 1.9e-33
Identity = 118/428 (27.57%), Postives = 186/428 (43.46%), Query Frame = 0
Query: 166 ILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKS 225
I +L R+ + LE+F M G+ S + +L+ RNG + L + + MK+ K
Sbjct: 148 ISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKI 207
Query: 226 STG-HSYSLMLKAVA----DTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENN 285
S +Y+ ++ A A D G L + +PD+ + YNT++S C
Sbjct: 208 SPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDI-----VTYNTLLSACAIRGL 267
Query: 286 WIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQA 345
EAE +R M G TYS LV TF + + E D+ +M P +
Sbjct: 268 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 327
Query: 346 IIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMG 405
++ A +K G A+ VF M G PN+ ++ L+N G++ +F MKS
Sbjct: 328 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 387
Query: 406 HSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRA 465
PD T+N L+ + + + LF + EE ++ Y I+ C K GL + A
Sbjct: 388 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMV-EENIEPDMETYEGIIFACGKGGLHEDA 447
Query: 466 LQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRC 525
+IL M A+ ++ S+ +Y VI A A E AL + M P T SL+
Sbjct: 448 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 507
Query: 526 CIWGSLWDEVELLINKFAP-----DVSVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPD 584
G L E E ++++ + +NA I+ GK E A K Y+ M K+ PD
Sbjct: 508 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 567
BLAST of Sed0021178 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 133.3 bits (334), Expect = 9.5e-30
Identity = 107/426 (25.12%), Postives = 193/426 (45.31%), Query Frame = 0
Query: 158 DVVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIF 217
DV + I L R +++R A+ + M GL+P +++ + G LD LRI
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 218 EFMKSNKSSTGHSYSLMLKAVADTHGFL------SALEMFKAWEREPDLKQFDAIVYNTM 277
E M G S+S + V HGF AL + + D +NT+
Sbjct: 248 EQM----VEFGCSWSNVSVNVI-VHGFCKEGRVEDALNFIQEMSNQDGFFP-DQYTFNTL 307
Query: 278 ISVCGKENNWIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHC 337
++ K + A +M G TY+ ++S + + + AV++ +M+ C
Sbjct: 308 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 367
Query: 338 KPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFS 397
P T +I KE + + A + + + G P+ FN+LI L + +A
Sbjct: 368 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 427
Query: 398 IFNVMKSMGHSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCC 457
+F M+S G PD +T+N L+ +L + ++A+++ + ++ A ++ YN+++
Sbjct: 428 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR-SVITYNTLIDGF 487
Query: 458 SKLGLWDRALQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDT 517
K A +I EME G+ ++ +YN +I +R+ E A Q+ ++MI + PD
Sbjct: 488 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 547
Query: 518 FTHLSLI-RCCIWGSLWDEVELL----INKFAPDVSVYNAVIQGTCLRGKTELAKKLYMK 573
+T+ SL+ C G + +++ N PD+ Y +I G C G+ E+A KL
Sbjct: 548 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 606
BLAST of Sed0021178 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 1.4e-28
Identity = 99/431 (22.97%), Postives = 207/431 (48.03%), Query Frame = 0
Query: 166 ILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNK- 225
I +L ++ +V SA +F +Q G ++ SL++ +G + + +F+ M+ +
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 226 SSTGHSYSLML----KAVADTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENN 285
T +Y+++L K + S +E K+ P DA YNT+I+ C + +
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAP-----DAYTYNTLITCCKRGSL 299
Query: 286 WIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQA 345
EA + + M+A G S +TY+ L+ + +S++ + A+ + +MV N P T +
Sbjct: 300 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 359
Query: 346 IIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMG 405
+I A +++G D A+ + M + G +P+ + L++ +A +V A SIF M++ G
Sbjct: 360 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 419
Query: 406 HSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRA 465
P++ T+NA + + ++ + + +F+ + + +I +N++L + G+
Sbjct: 420 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP-DIVTWNTLLAVFGQNGMDSEV 479
Query: 466 LQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRC 525
+ EM+ +G + ++N +I A E A+ VY RM+ TPD T+ +++
Sbjct: 480 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 539
Query: 526 CIWGSLWDEVELLI-----NKFAPDVSVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPD 585
G +W++ E ++ + P+ Y +++ + L L ++ I+P
Sbjct: 540 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP- 599
Query: 586 GKTRALMLQNL 587
RA++L+ L
Sbjct: 600 ---RAVLLKTL 600
BLAST of Sed0021178 vs. ExPASy Swiss-Prot
Match:
Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)
HSP 1 Score: 127.9 bits (320), Expect = 4.0e-28
Identity = 107/438 (24.43%), Postives = 197/438 (44.98%), Query Frame = 0
Query: 156 ETDVVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLR 215
E D V+ + + L + +V ALEL M G P+ LN+L+ L NG + D +
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 216 IFEFM-KSNKSSTGHSYSLMLKAVADTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISV 275
+ + M ++ +Y +L + + A+E+ + E E ++K DA+ Y+ +I
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIK-LDAVKYSIIIDG 274
Query: 276 CGKENNWIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPG 335
K+ + A + ME G A ITY+ L+ F + + + + M++ P
Sbjct: 275 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 334
Query: 336 NDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFN 395
T +I + KEGK A ++ ++M++ G PN+I +N+LI+ K + A + +
Sbjct: 335 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 394
Query: 396 VMKSMGHSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKL 455
+M S G PD+ T+N L+ ANR +D + LF
Sbjct: 395 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFR------------------------- 454
Query: 456 GLWDRALQILWEMEASGLLISASSYN-IVIGACETARKPEIALQVYERMIHQKHTPDTFT 515
EM G++ + +YN +V G C++ K E+A ++++ M+ ++ PD +
Sbjct: 455 -----------EMSLRGVIANTVTYNTLVQGFCQSG-KLEVAKKLFQEMVSRRVRPDIVS 514
Query: 516 HLSLI-RCCIWGSLWDEVELL----INKFAPDVSVYNAVIQGTCLRGKTELAKKLYMKMR 575
+ L+ C G L +E+ +K D+ +Y +I G C K + A L+ +
Sbjct: 515 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 553
Query: 576 KNGIQPDGKTRALMLQNL 587
G++ D + +M+ L
Sbjct: 575 LKGVKLDARAYNIMISEL 553
BLAST of Sed0021178 vs. ExPASy TrEMBL
Match:
A0A1S3C9M1 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498557 PE=4 SV=1)
HSP 1 Score: 972.6 bits (2513), Expect = 7.5e-280
Identity = 488/609 (80.13%), Postives = 529/609 (86.86%), Query Frame = 0
Query: 3 VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
VL N SPTLIL N+ +YQHDS YP KH Q +N P LKSC+ I Y N VSML
Sbjct: 4 VLGNSSPTLILLNEFNYQHDSYYPFRREDKHLRQCINVNPMLKSCMRCTIMYDGNAVSML 63
Query: 63 SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
MS P+L+ V S R + FR GVGTLL C EDEAI +V+DE+G+E SRE KLPPWGDM
Sbjct: 64 PMSTPRLNLVVQSIRGMQFRTGVGTLLNCGEDEAIELVIDEEGVES-SREWKLPPWGDMT 123
Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
++ E FQSEDV+ K+LEGEAL N+SKVHFLEETD V+LSKRILILSRKNKVRSALELF
Sbjct: 124 HQDEAAFQSEDVNLPKILEGEALENESKVHFLEETDKVLLSKRILILSRKNKVRSALELF 183
Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
RSMQLAG+LP+ HALNSLLACLLRNGL DGLRIFEFMK N+ STGH+YSL+LKAVA+ H
Sbjct: 184 RSMQLAGVLPNLHALNSLLACLLRNGLFADGLRIFEFMKLNELSTGHTYSLVLKAVANAH 243
Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
GFLSALEMFKAWE + L QFDAIVYNTMIS+CGK+NNW+EAERTWRLME NGC+ATHIT
Sbjct: 244 GFLSALEMFKAWEHKYVLTQFDAIVYNTMISICGKDNNWVEAERTWRLMEKNGCTATHIT 303
Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
YSLLVSTFVR NQNELA+D YVKMVQ+ KPGNDTMQAIIGASSKEGKWDFAL VFQDML
Sbjct: 304 YSLLVSTFVRCNQNELAIDAYVKMVQSSFKPGNDTMQAIIGASSKEGKWDFALGVFQDML 363
Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
KCG QPNS++FNALINALGKAKEVTLAFSI+NVMKSMGHSPDVYTWNALLGALY ANRYN
Sbjct: 364 KCGLQPNSVSFNALINALGKAKEVTLAFSIYNVMKSMGHSPDVYTWNALLGALYKANRYN 423
Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIV 482
DAIHLF FVKREEKA LNIHIYN+ILMCCSKLGLW+RALQILWEME SGLLIS +SYNIV
Sbjct: 424 DAIHLFGFVKREEKAQLNIHIYNTILMCCSKLGLWERALQILWEMEVSGLLISTTSYNIV 483
Query: 483 IGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVS 542
+ ACETARKPEIALQVYERM+HQKHTPDTFTHLSLIRCCIWGSLWDEVELL+NK PDVS
Sbjct: 484 LTACETARKPEIALQVYERMVHQKHTPDTFTHLSLIRCCIWGSLWDEVELLLNKSGPDVS 543
Query: 543 VYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRFK 602
VYN VIQG CLRGKT+LAKKLY KMR+N IQ DGKTRALMLQNLPKDPARLKNR AS FK
Sbjct: 544 VYNVVIQGMCLRGKTDLAKKLYTKMRENSIQSDGKTRALMLQNLPKDPARLKNRWASGFK 603
Query: 603 KRHRHYHHR 612
KR R YHHR
Sbjct: 604 KRRRRYHHR 611
BLAST of Sed0021178 vs. ExPASy TrEMBL
Match:
A0A6J1JSM4 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487480 PE=4 SV=1)
HSP 1 Score: 958.0 bits (2475), Expect = 1.9e-275
Identity = 492/610 (80.66%), Postives = 533/610 (87.38%), Query Frame = 0
Query: 3 VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
+LIN PTLILSN+L+YQ SCYPVSCA KHFH IPELKSCI RIT+G NV SM
Sbjct: 4 LLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----VIPELKSCIRRRITHGGNVASMS 63
Query: 63 SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
SMSIP+L+ V ST+ L FR CEEDEAI +VVDE G+EE SRE K PPWG+++
Sbjct: 64 SMSIPRLNFVVRSTKFLEFRT-------CEEDEAISLVVDE-GVEESSREWKSPPWGEVK 123
Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
N+ EPIFQSEDV+QS++LEGE LV+D KV+FLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 NQDEPIFQSEDVNQSEVLEGEGLVSDRKVYFLEETDEVMLSKRILILSRKNKVRSAMELF 183
Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
RSM LAGLLPSFHA NSLLACLLRNGL DDGLRIFEFMKSNK STGH+YSL+LKAVADTH
Sbjct: 184 RSMHLAGLLPSFHASNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVADTH 243
Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
GFLSALEMF+ WE E DLKQFDAIVYN MISVCGKENNW+EAER WRLME NGCSATH+T
Sbjct: 244 GFLSALEMFRTWEHEYDLKQFDAIVYNMMISVCGKENNWVEAERIWRLMEENGCSATHLT 303
Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
YSLLVST+VR NQNELA+DIYVKMVQN KP NDTMQAIIGASS+EG+WDFALRVFQ+ML
Sbjct: 304 YSLLVSTYVRCNQNELAIDIYVKMVQNCYKPANDTMQAIIGASSREGRWDFALRVFQEML 363
Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
KCG +PNS+AFNALINALGKA EVTLAFSI+N MKSMGHSPDVYTW ALLGALY ANRYN
Sbjct: 364 KCGLEPNSVAFNALINALGKANEVTLAFSIYNRMKSMGHSPDVYTWKALLGALYKANRYN 423
Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEME-ASGLLISASSYNI 482
DAI LFEFVKREEKA LNIHIYN++L+ CSKLGLWDRALQILWEME ASG L+SASSYNI
Sbjct: 424 DAIRLFEFVKREEKAQLNIHIYNTVLLSCSKLGLWDRALQILWEMEAASGCLVSASSYNI 483
Query: 483 VIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDV 542
VI ACE ARKPEIAL+VYERMIHQK TPDTFT LSLIR CIWGSLWDEVELL++K A D
Sbjct: 484 VISACEMARKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSKSAHDA 543
Query: 543 SVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRF 602
SVYNAVIQG CLRGKT+LAKK Y KM + GIQPDGKTRALMLQ LPKD A LKNRLASRF
Sbjct: 544 SVYNAVIQGMCLRGKTDLAKKFYTKMHEIGIQPDGKTRALMLQTLPKDRAGLKNRLASRF 599
Query: 603 KKRHRHYHHR 612
KKRHRHYHHR
Sbjct: 604 KKRHRHYHHR 599
BLAST of Sed0021178 vs. ExPASy TrEMBL
Match:
A0A6J1HK91 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464311 PE=4 SV=1)
HSP 1 Score: 956.4 bits (2471), Expect = 5.6e-275
Identity = 493/610 (80.82%), Postives = 533/610 (87.38%), Query Frame = 0
Query: 3 VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
+LIN PTLILSN+L+YQ SCYPVSCA KHFH IPELKSCI RIT+G NV SM
Sbjct: 4 LLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----GIPELKSCIRRRITHGGNVASMS 63
Query: 63 SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
SMSIP+L+ V ST+AL +R CEEDEAI +VVDE G+EE SRE K PPWG+++
Sbjct: 64 SMSIPRLNFVVRSTKALEYRT-------CEEDEAIRLVVDE-GVEESSREWKSPPWGEVK 123
Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
N+ E IFQSEDV+QS+ LEGE LV+D KV+FLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 NQDESIFQSEDVNQSEGLEGEGLVSDRKVYFLEETDEVMLSKRILILSRKNKVRSAMELF 183
Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
RSM LAGLLPSFHA NSLLACLLRNGL DDGLRIFEFMKSNK STGH+YSL+LKAVADTH
Sbjct: 184 RSMHLAGLLPSFHASNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVADTH 243
Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
GFLSALEMF+ WE E DLKQFDAIVYNTMISVCGKENNW+EAER WRLMEANGCS TH+T
Sbjct: 244 GFLSALEMFRTWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERIWRLMEANGCSTTHLT 303
Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
YSLLVS +VR NQNELA+DIYVKMVQN KP NDTMQAIIGASS+EG+WDFALRVFQDML
Sbjct: 304 YSLLVSMYVRCNQNELAIDIYVKMVQNDLKPANDTMQAIIGASSREGRWDFALRVFQDML 363
Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
KCG +PNS+AFNALINALGKA EVTLAFSI+N MKSMGHSPDVYTW ALLGALY ANRYN
Sbjct: 364 KCGLEPNSVAFNALINALGKANEVTLAFSIYNRMKSMGHSPDVYTWKALLGALYKANRYN 423
Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEME-ASGLLISASSYNI 482
DAI LF+FVKREEKA LNIHIYN+IL+ CSKLGLWDRALQILWEME ASG L+SASSYNI
Sbjct: 424 DAIRLFQFVKREEKAQLNIHIYNTILLSCSKLGLWDRALQILWEMEAASGRLVSASSYNI 483
Query: 483 VIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDV 542
VI ACE A+KPEIAL+VYERMIHQK TPDTFT LSLIR CIWGSLWDEVELL++K A D
Sbjct: 484 VISACEMAKKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSKSAHDA 543
Query: 543 SVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRF 602
SVYNAVIQG CLRGKT+LAKKLY KMRK GIQPDGKTRALMLQ LPKD A LKNRLASRF
Sbjct: 544 SVYNAVIQGMCLRGKTDLAKKLYTKMRKIGIQPDGKTRALMLQTLPKDRAGLKNRLASRF 599
Query: 603 KKRHRHYHHR 612
KKRHRHY HR
Sbjct: 604 KKRHRHYRHR 599
BLAST of Sed0021178 vs. ExPASy TrEMBL
Match:
A0A6J1JQP6 (pentatricopeptide repeat-containing protein At3g29290 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487480 PE=4 SV=1)
HSP 1 Score: 952.2 bits (2460), Expect = 1.1e-273
Identity = 491/610 (80.49%), Postives = 532/610 (87.21%), Query Frame = 0
Query: 3 VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
+LIN PTLILSN+L+YQ SCYPVSCA KHFH IPELKSCI RIT+G NV SM
Sbjct: 4 LLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----VIPELKSCIRRRITHGGNVASMS 63
Query: 63 SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
SMSIP+L+ V ST+ L FR CEEDEAI +VVDE G+EE SRE K PPWG+++
Sbjct: 64 SMSIPRLNFVVRSTKFLEFRT-------CEEDEAISLVVDE-GVEESSREWKSPPWGEVK 123
Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
N+ EPIFQSEDV+QS++LEGE LV+D KV+FLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 NQDEPIFQSEDVNQSEVLEGEGLVSDRKVYFLEETDEVMLSKRILILSRKNKVRSAMELF 183
Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
RSM LAGLLPSFHA NSLLACLLRNGL DDGLRIFEFMKSNK STGH+YSL+LKAVADTH
Sbjct: 184 RSMHLAGLLPSFHASNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVADTH 243
Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
GFLSALEMF+ WE E DLKQFDAIVYN MISVCGKENNW+EAER WRLME NGCSATH+T
Sbjct: 244 GFLSALEMFRTWEHEYDLKQFDAIVYNMMISVCGKENNWVEAERIWRLMEENGCSATHLT 303
Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
YSLLVST+VR NQNELA+DIYVKMVQN KP NDTMQAIIGASS+EG+WDFALRVFQ+ML
Sbjct: 304 YSLLVSTYVRCNQNELAIDIYVKMVQNCYKPANDTMQAIIGASSREGRWDFALRVFQEML 363
Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
KCG +PNS+AFNALINALGKA EVTLAFSI+N MKSMGHSPDVYTW ALLGALY ANRYN
Sbjct: 364 KCGLEPNSVAFNALINALGKANEVTLAFSIYNRMKSMGHSPDVYTWKALLGALYKANRYN 423
Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEME-ASGLLISASSYNI 482
DAI LFEFVKREEKA LNIHIYN++L+ CSKLGLWDRALQILWEME ASG L+SASSYNI
Sbjct: 424 DAIRLFEFVKREEKAQLNIHIYNTVLLSCSKLGLWDRALQILWEMEAASGCLVSASSYNI 483
Query: 483 VIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDV 542
VI ACE ARKPEIAL+VYERMIHQK TPDTFT LSLIR CIWGSLWDEVELL++ A D
Sbjct: 484 VISACEMARKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSS-AHDA 543
Query: 543 SVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRF 602
SVYNAVIQG CLRGKT+LAKK Y KM + GIQPDGKTRALMLQ LPKD A LKNRLASRF
Sbjct: 544 SVYNAVIQGMCLRGKTDLAKKFYTKMHEIGIQPDGKTRALMLQTLPKDRAGLKNRLASRF 598
Query: 603 KKRHRHYHHR 612
KKRHRHYHHR
Sbjct: 604 KKRHRHYHHR 598
BLAST of Sed0021178 vs. ExPASy TrEMBL
Match:
A0A6J1BY07 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006743 PE=4 SV=1)
HSP 1 Score: 951.4 bits (2458), Expect = 1.8e-273
Identity = 473/608 (77.80%), Postives = 524/608 (86.18%), Query Frame = 0
Query: 3 VLINPSPTLILSNDLSYQHDSCYPVSCAQKHFHQWVNAIPELKSCIGGRITYGCNVVSML 62
VLINPSPTL+LSN+L+YQ DS YPV+ A + HQ N LKS + I Y NV+SML
Sbjct: 4 VLINPSPTLLLSNELNYQQDSYYPVTYAHRLLHQCRNVNSFLKSRMRCSIIYRGNVISML 63
Query: 63 SMSIPQLSCAVPSTRALVFRNGVGTLLKCEEDEAIGMVVDEDGIEEPSREGKLPPWGDME 122
SMS+P+L+ + STRA+ F GVGTLL CEEDEAI +V DE+G+E S E K PPWGD+
Sbjct: 64 SMSVPRLNLVIRSTRAMEFSTGVGTLLNCEEDEAIELVTDEEGLE--SFEWKSPPWGDIV 123
Query: 123 NRYEPIFQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELF 182
E FQSED +Q +MLE EA +N SKVHFLEETD VMLSKRILILSRKNKVRSA+ELF
Sbjct: 124 KHDESSFQSEDTNQPRMLEAEAFINGSKVHFLEETDEVMLSKRILILSRKNKVRSAMELF 183
Query: 183 RSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTH 242
RSMQLAGLLPS HALNSLLACLLRN L DDGLRIF MK+NK STGH+YSL+LKAVAD
Sbjct: 184 RSMQLAGLLPSLHALNSLLACLLRNELFDDGLRIFALMKTNKLSTGHTYSLILKAVADAR 243
Query: 243 GFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHIT 302
GFLSALEMFKAWE+E D+K FD IVYNTMISVCGKENNW+EAERTWRLMEANGC AT IT
Sbjct: 244 GFLSALEMFKAWEQEYDVKHFDPIVYNTMISVCGKENNWVEAERTWRLMEANGCGATRIT 303
Query: 303 YSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDML 362
Y LLVSTFVR QNELA+D YVKMVQNH KPGNDTMQ IIGAS KEGKWDFALRVF+DML
Sbjct: 304 YCLLVSTFVRCKQNELAIDTYVKMVQNHFKPGNDTMQTIIGASLKEGKWDFALRVFEDML 363
Query: 363 KCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYN 422
KCG QPNS+AFNALI+ALGKAK+VTLAF+++N+MKSMGH PD YTWNALLG+LY ANRYN
Sbjct: 364 KCGLQPNSVAFNALIHALGKAKKVTLAFNVYNMMKSMGHPPDAYTWNALLGSLYEANRYN 423
Query: 423 DAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIV 482
DAI LFEFVKRE+K LNIH+YN+ILM CSKLGLWDR +QILWEMEASGLLIS +SYNIV
Sbjct: 424 DAIRLFEFVKREDKPQLNIHVYNTILMSCSKLGLWDRTIQILWEMEASGLLISTASYNIV 483
Query: 483 IGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVS 542
I ACE ARKP+IALQVYERMIHQKHTPDTFTHLSL+RCCIWGSLWDEVE+L+NK AP+VS
Sbjct: 484 ISACEMARKPKIALQVYERMIHQKHTPDTFTHLSLVRCCIWGSLWDEVEVLLNKSAPNVS 543
Query: 543 VYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPKDPARLKNRLASRFK 602
VYNAVIQG CLRGKT+LAK+LY KMR+NGIQ DGKTRALMLQNLPKDPAR NR ASRF+
Sbjct: 544 VYNAVIQGMCLRGKTDLAKRLYSKMRENGIQADGKTRALMLQNLPKDPARFNNRWASRFR 603
Query: 603 KRHRHYHH 611
KR+RHYHH
Sbjct: 604 KRNRHYHH 609
BLAST of Sed0021178 vs. TAIR 10
Match:
AT3G29290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 506.1 bits (1302), Expect = 3.8e-143
Identity = 251/461 (54.45%), Postives = 332/461 (72.02%), Query Frame = 0
Query: 129 FQSEDVSQSKMLEGEALVNDSKVHFLEETDVVMLSKRILILSRKNKVRSALELFRSMQLA 188
F E+V LE + + +++HFLEE + LSKR+ LSR +KVRSALELF SM+
Sbjct: 77 FNGENVVCGLELEEKTAGDRNRIHFLEERNEETLSKRLRKLSRLDKVRSALELFDSMRFL 136
Query: 189 GLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKSSTGHSYSLMLKAVADTHGFLSAL 248
GL P+ HA NS L+CLLRNG + +FEFM+ ++ TGH+YSLMLKAVA+ G SAL
Sbjct: 137 GLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSLMLKAVAEVKGCESAL 196
Query: 249 EMFKAWEREPDLKQ-FDAIVYNTMISVCGKENNWIEAERTWRLMEANGCSATHITYSLLV 308
MF+ EREP + FD ++YNT IS+CG+ NN E ER WR+M+ +G T ITYSLLV
Sbjct: 197 RMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLV 256
Query: 309 STFVRSNQNELAVDIYVKMVQNHCKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQ 368
S FVR ++ELA+D+Y +MV N D M A+I A +KE KWD AL++FQ MLK G +
Sbjct: 257 SIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMK 316
Query: 369 PNSIAFNALINALGKAKEVTLAFSIFNVMKSMGHSPDVYTWNALLGALYHANRYNDAIHL 428
PN +A N LIN+LGKA +V L F +++V+KS+GH PD YTWNALL ALY ANRY D + L
Sbjct: 317 PNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQL 376
Query: 429 FEFVKREEKAHLNIHIYNSILMCCSKLGLWDRALQILWEMEASGLLISASSYNIVIGACE 488
F+ ++ E LN ++YN+ ++ C KLG W++A+++L+EME SGL +S SSYN+VI ACE
Sbjct: 377 FDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACE 436
Query: 489 TARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLINKFAPDVSVYNAV 548
+RK ++AL VYE M + P+TFT+LSL+R CIWGSLWDEVE ++ K PDVS+YNA
Sbjct: 437 KSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVSLYNAA 496
Query: 549 IQGTCLRGKTELAKKLYMKMRKNGIQPDGKTRALMLQNLPK 589
I G CLR + + AK+LY+KMR+ G++PDGKTRA+MLQNL K
Sbjct: 497 IHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
BLAST of Sed0021178 vs. TAIR 10
Match:
AT1G74850.1 (plastid transcriptionally active 2 )
HSP 1 Score: 145.6 bits (366), Expect = 1.3e-34
Identity = 118/428 (27.57%), Postives = 186/428 (43.46%), Query Frame = 0
Query: 166 ILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNKS 225
I +L R+ + LE+F M G+ S + +L+ RNG + L + + MK+ K
Sbjct: 148 ISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKI 207
Query: 226 STG-HSYSLMLKAVA----DTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENN 285
S +Y+ ++ A A D G L + +PD+ + YNT++S C
Sbjct: 208 SPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDI-----VTYNTLLSACAIRGL 267
Query: 286 WIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQA 345
EAE +R M G TYS LV TF + + E D+ +M P +
Sbjct: 268 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 327
Query: 346 IIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMG 405
++ A +K G A+ VF M G PN+ ++ L+N G++ +F MKS
Sbjct: 328 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 387
Query: 406 HSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRA 465
PD T+N L+ + + + LF + EE ++ Y I+ C K GL + A
Sbjct: 388 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMV-EENIEPDMETYEGIIFACGKGGLHEDA 447
Query: 466 LQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRC 525
+IL M A+ ++ S+ +Y VI A A E AL + M P T SL+
Sbjct: 448 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 507
Query: 526 CIWGSLWDEVELLINKFAP-----DVSVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPD 584
G L E E ++++ + +NA I+ GK E A K Y+ M K+ PD
Sbjct: 508 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 567
BLAST of Sed0021178 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 133.3 bits (334), Expect = 6.8e-31
Identity = 107/426 (25.12%), Postives = 193/426 (45.31%), Query Frame = 0
Query: 158 DVVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIF 217
DV + I L R +++R A+ + M GL+P +++ + G LD LRI
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 218 EFMKSNKSSTGHSYSLMLKAVADTHGFL------SALEMFKAWEREPDLKQFDAIVYNTM 277
E M G S+S + V HGF AL + + D +NT+
Sbjct: 248 EQM----VEFGCSWSNVSVNVI-VHGFCKEGRVEDALNFIQEMSNQDGFFP-DQYTFNTL 307
Query: 278 ISVCGKENNWIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHC 337
++ K + A +M G TY+ ++S + + + AV++ +M+ C
Sbjct: 308 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 367
Query: 338 KPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFS 397
P T +I KE + + A + + + G P+ FN+LI L + +A
Sbjct: 368 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 427
Query: 398 IFNVMKSMGHSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCC 457
+F M+S G PD +T+N L+ +L + ++A+++ + ++ A ++ YN+++
Sbjct: 428 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR-SVITYNTLIDGF 487
Query: 458 SKLGLWDRALQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDT 517
K A +I EME G+ ++ +YN +I +R+ E A Q+ ++MI + PD
Sbjct: 488 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 547
Query: 518 FTHLSLI-RCCIWGSLWDEVELL----INKFAPDVSVYNAVIQGTCLRGKTELAKKLYMK 573
+T+ SL+ C G + +++ N PD+ Y +I G C G+ E+A KL
Sbjct: 548 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 606
BLAST of Sed0021178 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 129.4 bits (324), Expect = 9.8e-30
Identity = 99/431 (22.97%), Postives = 207/431 (48.03%), Query Frame = 0
Query: 166 ILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLRIFEFMKSNK- 225
I +L ++ +V SA +F +Q G ++ SL++ +G + + +F+ M+ +
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 226 SSTGHSYSLML----KAVADTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISVCGKENN 285
T +Y+++L K + S +E K+ P DA YNT+I+ C + +
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAP-----DAYTYNTLITCCKRGSL 299
Query: 286 WIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPGNDTMQA 345
EA + + M+A G S +TY+ L+ + +S++ + A+ + +MV N P T +
Sbjct: 300 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 359
Query: 346 IIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFNVMKSMG 405
+I A +++G D A+ + M + G +P+ + L++ +A +V A SIF M++ G
Sbjct: 360 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 419
Query: 406 HSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKLGLWDRA 465
P++ T+NA + + ++ + + +F+ + + +I +N++L + G+
Sbjct: 420 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP-DIVTWNTLLAVFGQNGMDSEV 479
Query: 466 LQILWEMEASGLLISASSYNIVIGACETARKPEIALQVYERMIHQKHTPDTFTHLSLIRC 525
+ EM+ +G + ++N +I A E A+ VY RM+ TPD T+ +++
Sbjct: 480 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 539
Query: 526 CIWGSLWDEVELLI-----NKFAPDVSVYNAVIQGTCLRGKTELAKKLYMKMRKNGIQPD 585
G +W++ E ++ + P+ Y +++ + L L ++ I+P
Sbjct: 540 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP- 599
Query: 586 GKTRALMLQNL 587
RA++L+ L
Sbjct: 600 ---RAVLLKTL 600
BLAST of Sed0021178 vs. TAIR 10
Match:
AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 127.9 bits (320), Expect = 2.8e-29
Identity = 107/438 (24.43%), Postives = 197/438 (44.98%), Query Frame = 0
Query: 156 ETDVVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSFHALNSLLACLLRNGLLDDGLR 215
E D V+ + + L + +V ALEL M G P+ LN+L+ L NG + D +
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 216 IFEFM-KSNKSSTGHSYSLMLKAVADTHGFLSALEMFKAWEREPDLKQFDAIVYNTMISV 275
+ + M ++ +Y +L + + A+E+ + E E ++K DA+ Y+ +I
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIK-LDAVKYSIIIDG 274
Query: 276 CGKENNWIEAERTWRLMEANGCSATHITYSLLVSTFVRSNQNELAVDIYVKMVQNHCKPG 335
K+ + A + ME G A ITY+ L+ F + + + + M++ P
Sbjct: 275 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 334
Query: 336 NDTMQAIIGASSKEGKWDFALRVFQDMLKCGFQPNSIAFNALINALGKAKEVTLAFSIFN 395
T +I + KEGK A ++ ++M++ G PN+I +N+LI+ K + A + +
Sbjct: 335 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 394
Query: 396 VMKSMGHSPDVYTWNALLGALYHANRYNDAIHLFEFVKREEKAHLNIHIYNSILMCCSKL 455
+M S G PD+ T+N L+ ANR +D + LF
Sbjct: 395 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFR------------------------- 454
Query: 456 GLWDRALQILWEMEASGLLISASSYN-IVIGACETARKPEIALQVYERMIHQKHTPDTFT 515
EM G++ + +YN +V G C++ K E+A ++++ M+ ++ PD +
Sbjct: 455 -----------EMSLRGVIANTVTYNTLVQGFCQSG-KLEVAKKLFQEMVSRRVRPDIVS 514
Query: 516 HLSLI-RCCIWGSLWDEVELL----INKFAPDVSVYNAVIQGTCLRGKTELAKKLYMKMR 575
+ L+ C G L +E+ +K D+ +Y +I G C K + A L+ +
Sbjct: 515 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 553
Query: 576 KNGIQPDGKTRALMLQNL 587
G++ D + +M+ L
Sbjct: 575 LKGVKLDARAYNIMISEL 553
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038891011.1 | 3.8e-286 | 82.34 | pentatricopeptide repeat-containing protein At3g29290 [Benincasa hispida] >XP_03... | [more] |
XP_008459413.1 | 1.6e-279 | 80.13 | PREDICTED: pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cuc... | [more] |
XP_022990659.1 | 4.0e-275 | 80.66 | pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cucurbita maxi... | [more] |
XP_022964230.1 | 1.2e-274 | 80.82 | pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cucurbita mosc... | [more] |
XP_023525691.1 | 2.6e-274 | 80.49 | pentatricopeptide repeat-containing protein At3g29290 [Cucurbita pepo subsp. pep... | [more] |
Match Name | E-value | Identity | Description | |
Q84J46 | 5.4e-142 | 54.45 | Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana OX... | [more] |
Q9S7Q2 | 1.9e-33 | 27.57 | Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... | [more] |
Q9LFF1 | 9.5e-30 | 25.12 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9LYZ9 | 1.4e-28 | 22.97 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
Q9LPX2 | 4.0e-28 | 24.43 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3C9M1 | 7.5e-280 | 80.13 | pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucumis melo... | [more] |
A0A6J1JSM4 | 1.9e-275 | 80.66 | pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucurbita ma... | [more] |
A0A6J1HK91 | 5.6e-275 | 80.82 | pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1JQP6 | 1.1e-273 | 80.49 | pentatricopeptide repeat-containing protein At3g29290 isoform X2 OS=Cucurbita ma... | [more] |
A0A6J1BY07 | 1.8e-273 | 77.80 | pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Momordica ch... | [more] |
Match Name | E-value | Identity | Description | |
AT3G29290.1 | 3.8e-143 | 54.45 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G74850.1 | 1.3e-34 | 27.57 | plastid transcriptionally active 2 | [more] |
AT3G53700.1 | 6.8e-31 | 25.12 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G02860.1 | 9.8e-30 | 22.97 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G12775.1 | 2.8e-29 | 24.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |