Sed0021160 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTAATTTTGTTTATTCCATTGCCATCCTTTTTCTTCTCCATCCAGATTCTTGTATTCCCGATTCGTTATTGCTCCATGGATTTTCCTTTGATTCCCTCTAAGTTGTGAAATCAAACAGAACACTAATTCAATTCTGTCCCCTTTGTTTATTTTCTGTTGTTCATCGTCGTCAACTCCAATCTTTTGAGCTTTGTGCTATGAAATTTGGGAAGGAATTCAAAACCCATCTGGAGCAAACCCTTCCCGAGTGGAGAGACAAATTTCTGTGTTACAAACCCCTCAAAGAGTTTCTGAATCACTACCCTAATCTCCCCTCAACCGCCGAGACTGGCGCTGCTTCTTTGGTCGACCTTCAAGATTGGTTCGTCTGGATTCTCAATGAAGAGCTGGAAAAATTGAATGATTTCTATGTTGATAAAGAGTAAGAGTTTTTTTATTCGATTTCAGGTTCTTTTTCGTTATTTCCCAGTTTCATCTTTAATTTGTCTGCTGTGTACATGCATTTATCAAACCCGTGTTTTCGATTTGTGCCTGTTGTGCTAATTACTTTTTTTGTGGGTCATTTGACAATGGCATATTAAGGAAGACTGCTAAGGAACACTATGATGTAAGCTGTATAACACTTATGAGTTATGACAATTTGAGGGAAATTGAGTTTGTTCGCACTGACTGATAAATAGAACTAGATGTCAGGTTGAATGAACTATGAAGGGTTCTCTTTGATCTTCGATAAGGGTTGTCATGAAACTATCGTGAAGTGGCCTATTGGTCAAGAGGGTCTTGAAGAGTTAAGGGTTGATAGGTTCAATCTATGATGGGCACGTGCACATTTAAATATTGTAAGGTCAGACGGTTGAATTGTGTACCGGCTGGCCCAGTTGCTGATAAAAAACAGAAAAGGAAAAAGATAAGGGTTGCCATAAAGGCAAGTTTTAGAAGTTAGATGTCTCATGTTTCTACGCTTGGATAGATTGGTTTGGCGGCCTTCTCCTCCTACTTAGCCTGATTAGATTCTACCAATTTCTTGCCAAACTAATGTTGTAGGGTGTCTTGTGAGATGGGGCATAGAAATTTTGTTAGCCATGTATCTAATACTAATTCTACAAGTTGTTTTTAAAGCTTAATTAGTAGAGAGTTAGAAAGTTGATAGAGTTAGTCAAGTGTGTATAAACTGATTTAGACATCTATATATATAAAAAAAAAGAAGACAGAAGACAGAGGACTATGGTGAAATTGGAGTCATGAGACATGCAAATAAATGACAATCATTTTGAGTACTAGAGCCTACCAATTTTGAGCACAGAAGGATGCTCCATTTTTCTGGATTTACTAATCTGCCCATCCAGACAATTTTGGTCCCTAGTGCATTGTTATGGTTTATGTATCTACAACTCAGGCTTAAGAAAATCATTTTCAAATTTGGTGTAGAAGGGCTGATAAAAATTCTGAAGAAGTATGTTAAATGAATCGGTGAACTGTTGTGCCTGCCTTACATGCAACTCGAAGTACGTCAACCTTTCTTTACAACAGAGCTTCTCACAAGTCTGGTCCATCAGTGTGAGGCAAACCTAGAGGCTAGAGCTACTTTTCCCATCAGAAGCAGAAGTCGTTGAATCTACCCCAGCCATACAAGTCGATCTGATCCCTATACTCGATTGCTCAAGAATTACTACATCCAAGACATCTTCAAATCTTGGGGAGGAAAGCGAGGATTTATATCGAAGCATAGTTGCTGCAATGATGGCCATTCGTGGCCTTTAAAAAGAAAGTTCAACCAATAATCCTTTGACATTTTCTTCTCTCTTTAAGAATCAGGAATACGAGAGTACTGGTGCTGTGACAGATGAAAACTCTCCCTCAAACTCTTTGGCTTCCTTGCCTAAAGGTAATGAAGATGATGAATAGTTTTGTTTTTATTCCTTCTCTCTCTGTATCACTGAGTTTTTATCTCTTTTTGTTGTCAAGAGTTCACTTTTTTACTCTGTACACAAATTAGATTTGAATGTGAGATATCTTATTTTGTACACTCGATGTATAGAATTCAACTGGTTGACCCCAAATATGTAGTATCTGG GTTAATTTTGTTTATTCCATTGCCATCCTTTTTCTTCTCCATCCAGATTCTTGTATTCCCGATTCGTTATTGCTCCATGGATTTTCCTTTGATTCCCTCTAAGTTGTGAAATCAAACAGAACACTAATTCAATTCTGTCCCCTTTGTTTATTTTCTGTTGTTCATCGTCGTCAACTCCAATCTTTTGAGCTTTGTGCTATGAAATTTGGGAAGGAATTCAAAACCCATCTGGAGCAAACCCTTCCCGAGTGGAGAGACAAATTTCTGTGTTACAAACCCCTCAAAGAGTTTCTGAATCACTACCCTAATCTCCCCTCAACCGCCGAGACTGGCGCTGCTTCTTTGGTCGACCTTCAAGATTGGTTCGTCTGGATTCTCAATGAAGAGCTGGAAAAATTGAATGATTTCTATGTTGATAAAGAAAGGGCTGATAAAAATTCTGAAGAAGTATGTTAAATGAATCGGTGAACTGTTGTGCCTGCCTTACATGCAACTCGAAGTACGTCAACCTTTCTTTACAACAGAGCTTCTCACAAGTCTGGTCCATCAGTGTGAGGCAAACCTAGAGGCTAGAGCTACTTTTCCCATCAGAAGCAGAAGTCGTTGAATCTACCCCAGCCATACAAGTCGATCTGATCCCTATACTCGATTGCTCAAGAATTACTACATCCAAGACATCTTCAAATCTTGGGGAGGAAAGCGAGGATTTATATCGAAGCATAGTTGCTGCAATGATGGCCATTCGTGGCCTTTAAAAAGAAAGTTCAACCAATAATCCTTTGACATTTTCTTCTCTCTTTAAGAATCAGGAATACGAGAGTACTGGTGCTGTGACAGATGAAAACTCTCCCTCAAACTCTTTGGCTTCCTTGCCTAAAGGTAATGAAGATGATGAATAGTTTTGTTTTTATTCCTTCTCTCTCTGTATCACTGAGTTTTTATCTCTTTTTGTTGTCAAGAGTTCACTTTTTTACTCTGTACACAAATTAGATTTGAATGTGAGATATCTTATTTTGTACACTCGATGTATAGAATTCAACTGGTTGACCCCAAATATGTAGTATCTGG ATGAAATTTGGGAAGGAATTCAAAACCCATCTGGAGCAAACCCTTCCCGAGTGGAGAGACAAATTTCTGTGTTACAAACCCCTCAAAGAGTTTCTGAATCACTACCCTAATCTCCCCTCAACCGCCGAGACTGGCGCTGCTTCTTTGGTCGACCTTCAAGATTGGTTCGTCTGGATTCTCAATGAAGAGCTGGAAAAATTGAATGATTTCTATGTTGATAAAGAAAGGGCTGATAAAAATTCTGAAGAAGTATGTTAA MKFGKEFKTHLEQTLPEWRDKFLCYKPLKEFLNHYPNLPSTAETGAASLVDLQDWFVWILNEELEKLNDFYVDKERADKNSEEVC Homology
BLAST of Sed0021160 vs. NCBI nr
Match: XP_038891095.1 (SPX domain-containing protein 4 [Benincasa hispida]) HSP 1 Score: 132.5 bits (332), Expect = 1.7e-27 Identity = 68/106 (64.15%), Postives = 69/106 (65.09%), Query Frame = 0
BLAST of Sed0021160 vs. NCBI nr
Match: XP_004141576.1 (SPX domain-containing protein 4 isoform X2 [Cucumis sativus] >KGN52477.1 hypothetical protein Csa_009375 [Cucumis sativus]) HSP 1 Score: 132.1 bits (331), Expect = 2.3e-27 Identity = 68/107 (63.55%), Postives = 69/107 (64.49%), Query Frame = 0
BLAST of Sed0021160 vs. NCBI nr
Match: XP_031741138.1 (SPX domain-containing protein 4 isoform X1 [Cucumis sativus]) HSP 1 Score: 132.1 bits (331), Expect = 2.3e-27 Identity = 68/107 (63.55%), Postives = 69/107 (64.49%), Query Frame = 0
BLAST of Sed0021160 vs. NCBI nr
Match: XP_022938495.1 (SPX domain-containing protein 4-like [Cucurbita moschata]) HSP 1 Score: 129.8 bits (325), Expect = 1.1e-26 Identity = 66/106 (62.26%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of Sed0021160 vs. NCBI nr
Match: KAG6578569.1 (SPX domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016127.1 SPX domain-containing protein 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 129.8 bits (325), Expect = 1.1e-26 Identity = 66/106 (62.26%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of Sed0021160 vs. ExPASy Swiss-Prot
Match: Q94A21 (SPX domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPX4 PE=2 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.2e-20 Identity = 54/104 (51.92%), Postives = 61/104 (58.65%), Query Frame = 0
BLAST of Sed0021160 vs. ExPASy Swiss-Prot
Match: A2XNL6 (SPX domain-containing protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=SPX4 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.3e-14 Identity = 38/86 (44.19%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of Sed0021160 vs. ExPASy Swiss-Prot
Match: Q10B79 (SPX domain-containing protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=SPX4 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.3e-14 Identity = 38/86 (44.19%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of Sed0021160 vs. ExPASy Swiss-Prot
Match: O48781 (SPX domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SPX2 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.3e-09 Identity = 35/89 (39.33%), Postives = 47/89 (52.81%), Query Frame = 0
BLAST of Sed0021160 vs. ExPASy Swiss-Prot
Match: Q8LBH4 (SPX domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SPX1 PE=1 SV=2) HSP 1 Score: 62.0 bits (149), Expect = 3.7e-09 Identity = 33/82 (40.24%), Postives = 46/82 (56.10%), Query Frame = 0
BLAST of Sed0021160 vs. ExPASy TrEMBL
Match: A0A0A0KVM7 (SPX domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G637670 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.1e-27 Identity = 68/107 (63.55%), Postives = 69/107 (64.49%), Query Frame = 0
BLAST of Sed0021160 vs. ExPASy TrEMBL
Match: A0A6J1FJY7 (SPX domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111444714 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.4e-27 Identity = 66/106 (62.26%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of Sed0021160 vs. ExPASy TrEMBL
Match: A0A6J1HGB1 (SPX domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111463305 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 7.1e-27 Identity = 67/113 (59.29%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of Sed0021160 vs. ExPASy TrEMBL
Match: A0A5A7T893 (SPX domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002720 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.7e-26 Identity = 68/108 (62.96%), Postives = 69/108 (63.89%), Query Frame = 0
BLAST of Sed0021160 vs. ExPASy TrEMBL
Match: A0A6J1JNM7 (SPX domain-containing protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111486950 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.7e-26 Identity = 66/113 (58.41%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of Sed0021160 vs. TAIR 10
Match: AT5G15330.1 (SPX domain gene 4 ) HSP 1 Score: 100.1 bits (248), Expect = 8.8e-22 Identity = 54/104 (51.92%), Postives = 61/104 (58.65%), Query Frame = 0
BLAST of Sed0021160 vs. TAIR 10
Match: AT2G26660.1 (SPX domain gene 2 ) HSP 1 Score: 63.5 bits (153), Expect = 9.2e-11 Identity = 35/89 (39.33%), Postives = 47/89 (52.81%), Query Frame = 0
BLAST of Sed0021160 vs. TAIR 10
Match: AT5G20150.1 (SPX domain gene 1 ) HSP 1 Score: 62.0 bits (149), Expect = 2.7e-10 Identity = 33/82 (40.24%), Postives = 46/82 (56.10%), Query Frame = 0
BLAST of Sed0021160 vs. TAIR 10
Match: AT2G45130.1 (SPX domain gene 3 ) HSP 1 Score: 60.1 bits (144), Expect = 1.0e-09 Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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