Sed0020945 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCTTTTCTACAGCACTCTAGAGACTGCCAGAAAACAGAAATCCTTTTTCTTCTGTCTCTTTTTCAGTGGGCTTCTTCTTCAACAATTCTCCCTGTTCTTCATTCTCTTCATCATCAAAACCTTCAAATCCAATCATCCATCACTGAAGTTTGTTGTAGTAATCGGATTTTCAACGGAAAAAGGAAGTTTCGTGGAGCATTTACGGTACAGATTTGAGGAGAACAAGTTTTTCTTTGACCGGAGATGAAGATGAAGATGAAACGAAAAGATCTCGATCAATTCAACCACGAGTTCTCCGATTTCTCCCTCTCCTCGCCGGCCAGGAAGATCCGCCGTCTGGTACTTGCTTTTTTTGTACTTTTTCTGCTTCGGTGTTGTTGTTTGTGGATTCTTATTCTTCGATTTCGTAGGATGTTGGATTGCCGCCGATTATCGAGGAAGAAGAACCGCCGGAAATCGCACAGCGGTTGATGCCTGGAAATTTTGAAGAATCGCCGGAGTTTTCTTCTGTTTCTGCTTCGGATTGTGCTATGGAAGATCGCTATTTCTGTGGTAATCAAGAGAGGGCTATTGTTCTGTTTAAGCCTGTTAATGCGCCTTTCTTGCAGACTTCTCCTCTTTCGGTCTCCGTTGATTCCGATATTCTATCTGGTTTGAAGAGTAAGTACTGATTGATTGATTGATTTCAGTTTAGTTTTTCAGATTTCTTTCAATTTCGTTTCCATATCTTTGAATCCTGCATTTGAACTGTCTAGACTCTATATTGGTCTTCTTTGTGGCTTCTAATCGTATTTTTGTCCATGATATTGGATAGAGGATTAGTGATTCTTTTTTTTTATATTACAACATGATTAGAGATGGTGGACTTAGCTAAGACCTCGTAATCTTTAGGTATACACTGATGCCGCTGAGCTACTGCTCTTTTTGGCCGGACTAGTGATTCTGAAGAAAGCTGAAAACGAAAGAATAAATCTAGGTTTTTATCATTCTTGCTTGAGGAACCAAAAGGATAATGTAGTTATGAGTTGGCTAGTGGTCGAGACTCGAGAGAATCTCGAGTAACAAAAGGATATGGTTTCAATTTATGGTCTTCGCCCAATTAGGAATTAATTTTCGTGACACCCAAATATTGTAGGTTAAAAAGTGAGTAGTCGAGGTGCTAATTGAGGTGCATGTAAGCTACCCTGACACTCATGAATTAAAGAAAGAGTACTTGCTAAGTTCCCGTAGTTATGAGTTGATCTAGTGATCATGGTTATGAGAAACCAAAAGTATAAGGTTTTAAGCTATCCTATCCCACTAATTAGGAATTAATTTTTTATTGGTTACCTTTTAACACTCAAATGTTGTAGGTTCAAATACAAAGTCGAGATGTGTGTAAGCAAACTTAACACTCTTAGGGTGCGTTTGGGGCACCGGTTTGGGTATTATAGACGGAAGGTTATGATAAACGGTAGGTTATTATAAATGGTGTTTGAGGAGCAAGTTATTATAATAGAGATTATGATAAACGGTGTTTGAGAGACTGGTTATGTAACAAAAAGTAATATATGTAAGGTGTAGATATACGGGCACGTATAGATAAACGGGCACGCAGTTTTAGGTAACCACCGTTTATAATAAACGGTGGGACAAACATCGGTTGGGTTATTATAACCAATTTGGCCGTTTATATAAACGGGGGCCCAAACACACCCTTAGATTAAAAAAAGAAAGAGTTATTGTAGTCCGTAGTTAATATCTCATGACCATTGTTTCTGATCTCTATATATAACTGACCATTATCAGGCGAATTTCTTTTTCGCTATGATGGGCGGCTGAAATCTGGTGAGAATGACGAAGAAATGGAGACAGAGAACAAAAATCTTGCTGTTGTTCCTTGGGTTCCGCGGCTGCAGGTTCGTGTTCCCACAAACATACATGTCCATCAAGAGGAGACTCCACAGTTAATGGACATTGAAGATGACAACTTAAGCAGTCAACAGCCTTATGGATATGGAGGAATGGAAGGAGCTAATGCTATTCAACAATGGCACCAACAGCACTGCATGTTTCCTCCGCTGCCACAACAACAACAACAACAAGCATCCTCGCCCATAACATGGTTTCGTTGATGGTATGTACATAGTGAAGAATTTCCATCTTTTGATCTCATGGGGTGCTAGATAATAGGGTATTTTGCAGCAAATTTGACTTGAAAAACATATGGGGTATAATTATTTTTGTTGCCTTGCTAGTGTTCATCATCATGTGGCAGCTTTTCTTAGGTAATGTTGGTGCATGCATCTGAGGATGTGAGCTTATGTACAGATTCATTCCCCCTCTACTACTTGCTTTATGAGAATAGAATGGTTTCTAAATTTAGATTTGACAACGATGTATGACATTGGGGTAATGTTGTAGGGTCTCCTGACAATGGGATAACTTCCTGAAGGAATTTAGAGATGATGGGTTTGATTTATAGTGGTCACTTATGAATTAATTCCCTATGTAGTTCATTGGCATATAAATGTTGTTGAGTCAGCAGAATGTCTCATGAAATAGTCTATATGCACGCAAGTTGGCTCAAATAATAACGTATATTTAAAAAAAAAATGGGATGATGTTGTCTATCCGTTCTACAAAAGTTGGCATTTTGTACAAAGAATTCTCCCTTTTGCTCAGATTCTGGTGTCT GGCTTTTCTACAGCACTCTAGAGACTGCCAGAAAACAGAAATCCTTTTTCTTCTGTCTCTTTTTCAGTGGGCTTCTTCTTCAACAATTCTCCCTGTTCTTCATTCTCTTCATCATCAAAACCTTCAAATCCAATCATCCATCACTGAAGTTTGTTGTAGTAATCGGATTTTCAACGGAAAAAGGAAGTTTCGTGGAGCATTTACGGTACAGATTTGAGGAGAACAAGTTTTTCTTTGACCGGAGATGAAGATGAAGATGAAACGAAAAGATCTCGATCAATTCAACCACGAGTTCTCCGATTTCTCCCTCTCCTCGCCGGCCAGGAAGATCCGCCGTCTGGATGTTGGATTGCCGCCGATTATCGAGGAAGAAGAACCGCCGGAAATCGCACAGCGGTTGATGCCTGGAAATTTTGAAGAATCGCCGGAGTTTTCTTCTGTTTCTGCTTCGGATTGTGCTATGGAAGATCGCTATTTCTGTGGTAATCAAGAGAGGGCTATTGTTCTGTTTAAGCCTGTTAATGCGCCTTTCTTGCAGACTTCTCCTCTTTCGGTCTCCGTTGATTCCGATATTCTATCTGGTTTGAAGAGCGAATTTCTTTTTCGCTATGATGGGCGGCTGAAATCTGGTGAGAATGACGAAGAAATGGAGACAGAGAACAAAAATCTTGCTGTTGTTCCTTGGGTTCCGCGGCTGCAGGTTCGTGTTCCCACAAACATACATGTCCATCAAGAGGAGACTCCACAGTTAATGGACATTGAAGATGACAACTTAAGCAGTCAACAGCCTTATGGATATGGAGGAATGGAAGGAGCTAATGCTATTCAACAATGGCACCAACAGCACTGCATGTTTCCTCCGCTGCCACAACAACAACAACAACAAGCATCCTCGCCCATAACATGGTTTCGTTGATGGTATGTACATAGTGAAGAATTTCCATCTTTTGATCTCATGGGGTGCTAGATAATAGGGTATTTTGCAGCAAATTTGACTTGAAAAACATATGGGGTATAATTATTTTTGTTGCCTTGCTAGTGTTCATCATCATGTGGCAGCTTTTCTTAGGTAATGTTGGTGCATGCATCTGAGGATGTGAGCTTATGTACAGATTCATTCCCCCTCTACTACTTGCTTTATGAGAATAGAATGGTTTCTAAATTTAGATTTGACAACGATGTATGACATTGGGGTAATGTTGTAGGGTCTCCTGACAATGGGATAACTTCCTGAAGGAATTTAGAGATGATGGGTTTGATTTATAGTGGTCACTTATGAATTAATTCCCTATGTAGTTCATTGGCATATAAATGTTGTTGAGTCAGCAGAATGTCTCATGAAATAGTCTATATGCACGCAAGTTGGCTCAAATAATAACGTATATTTAAAAAAAAAATGGGATGATGTTGTCTATCCGTTCTACAAAAGTTGGCATTTTGTACAAAGAATTCTCCCTTTTGCTCAGATTCTGGTGTCT ATGAAGATGAAGATGAAACGAAAAGATCTCGATCAATTCAACCACGAGTTCTCCGATTTCTCCCTCTCCTCGCCGGCCAGGAAGATCCGCCGTCTGGATGTTGGATTGCCGCCGATTATCGAGGAAGAAGAACCGCCGGAAATCGCACAGCGGTTGATGCCTGGAAATTTTGAAGAATCGCCGGAGTTTTCTTCTGTTTCTGCTTCGGATTGTGCTATGGAAGATCGCTATTTCTGTGGTAATCAAGAGAGGGCTATTGTTCTGTTTAAGCCTGTTAATGCGCCTTTCTTGCAGACTTCTCCTCTTTCGGTCTCCGTTGATTCCGATATTCTATCTGGTTTGAAGAGCGAATTTCTTTTTCGCTATGATGGGCGGCTGAAATCTGGTGAGAATGACGAAGAAATGGAGACAGAGAACAAAAATCTTGCTGTTGTTCCTTGGGTTCCGCGGCTGCAGGTTCGTGTTCCCACAAACATACATGTCCATCAAGAGGAGACTCCACAGTTAATGGACATTGAAGATGACAACTTAAGCAGTCAACAGCCTTATGGATATGGAGGAATGGAAGGAGCTAATGCTATTCAACAATGGCACCAACAGCACTGCATGTTTCCTCCGCTGCCACAACAACAACAACAACAAGCATCCTCGCCCATAACATGGTTTCGTTGA MKMKMKRKDLDQFNHEFSDFSLSSPARKIRRLDVGLPPIIEEEEPPEIAQRLMPGNFEESPEFSSVSASDCAMEDRYFCGNQERAIVLFKPVNAPFLQTSPLSVSVDSDILSGLKSEFLFRYDGRLKSGENDEEMETENKNLAVVPWVPRLQVRVPTNIHVHQEETPQLMDIEDDNLSSQQPYGYGGMEGANAIQQWHQQHCMFPPLPQQQQQQASSPITWFR Homology
BLAST of Sed0020945 vs. NCBI nr
Match: XP_022134590.1 (uncharacterized protein LOC111006819 [Momordica charantia]) HSP 1 Score: 322.4 bits (825), Expect = 3.1e-84 Identity = 176/248 (70.97%), Postives = 190/248 (76.61%), Query Frame = 0
BLAST of Sed0020945 vs. NCBI nr
Match: XP_038880770.1 (uncharacterized protein LOC120072359 [Benincasa hispida]) HSP 1 Score: 316.2 bits (809), Expect = 2.2e-82 Identity = 179/250 (71.60%), Postives = 192/250 (76.80%), Query Frame = 0
BLAST of Sed0020945 vs. NCBI nr
Match: XP_022933859.1 (uncharacterized protein LOC111441147 [Cucurbita moschata]) HSP 1 Score: 311.6 bits (797), Expect = 5.4e-81 Identity = 177/248 (71.37%), Postives = 190/248 (76.61%), Query Frame = 0
BLAST of Sed0020945 vs. NCBI nr
Match: XP_023531776.1 (uncharacterized protein LOC111793929 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 308.5 bits (789), Expect = 4.6e-80 Identity = 177/248 (71.37%), Postives = 188/248 (75.81%), Query Frame = 0
BLAST of Sed0020945 vs. NCBI nr
Match: XP_022968758.1 (uncharacterized protein LOC111467899 [Cucurbita maxima]) HSP 1 Score: 301.6 bits (771), Expect = 5.6e-78 Identity = 173/248 (69.76%), Postives = 186/248 (75.00%), Query Frame = 0
BLAST of Sed0020945 vs. ExPASy TrEMBL
Match: A0A6J1BYN8 (uncharacterized protein LOC111006819 OS=Momordica charantia OX=3673 GN=LOC111006819 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 1.5e-84 Identity = 176/248 (70.97%), Postives = 190/248 (76.61%), Query Frame = 0
BLAST of Sed0020945 vs. ExPASy TrEMBL
Match: A0A6J1F0X3 (uncharacterized protein LOC111441147 OS=Cucurbita moschata OX=3662 GN=LOC111441147 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 2.6e-81 Identity = 177/248 (71.37%), Postives = 190/248 (76.61%), Query Frame = 0
BLAST of Sed0020945 vs. ExPASy TrEMBL
Match: A0A6J1HZ13 (uncharacterized protein LOC111467899 OS=Cucurbita maxima OX=3661 GN=LOC111467899 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 2.7e-78 Identity = 173/248 (69.76%), Postives = 186/248 (75.00%), Query Frame = 0
BLAST of Sed0020945 vs. ExPASy TrEMBL
Match: A0A6J1E5E7 (uncharacterized protein LOC111429650 OS=Cucurbita moschata OX=3662 GN=LOC111429650 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 2.3e-77 Identity = 167/249 (67.07%), Postives = 181/249 (72.69%), Query Frame = 0
BLAST of Sed0020945 vs. ExPASy TrEMBL
Match: A0A1S3BX94 (uncharacterized protein LOC103494211 OS=Cucumis melo OX=3656 GN=LOC103494211 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 3.3e-76 Identity = 168/252 (66.67%), Postives = 187/252 (74.21%), Query Frame = 0
BLAST of Sed0020945 vs. TAIR 10
Match: AT5G35320.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-23 Identity = 91/245 (37.14%), Postives = 121/245 (49.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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