Sed0020561 (gene) Chayote v1

Overview


Name	Sed0020561
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	LG11: 28110375 .. 28122019 (+)
RNA-Seq Expression	Sed0020561
Synteny	Sed0020561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACATATTTGAGTTGAAGCCGTTGGATTGGATTAAACTTAAAGAAAAACTCCGCCTATATATATTATATATACGAAGTTCTTCCATTTTTCAATTCTACGCACCTAACGGGCTTCGATTTCTTCCAGGTTTGTTTCTCTCAATTCACTAATTTCATGTTTTATCTCTTCAATTCCATTCAATCCCGCTGTTTCTGTTCCTGTAATTCTCAATTCATCGAATCGCGGTTGTAGGGTTTGTGTTTCTGTTCTTGAATTGACATTGTCGCTTGGATTTTGGTTTTGGGGTTCTAGGGCTTTTGACCACAATGAGCGATCATCTCGTCCTGTATGTTGACCATTTGATTCCGCCGGTTTCTCCTGTCCCGCCTGTGCCCGAGCCGGTCGACCCTGTTCTTGACTCCGCCGCGGATGATCGGACGGCGGGCCTGGACGGACTTCATGAGGAGGAGCCGCTCATTCCGGCGGCGGAATGCCGCATTTGTCAGGAAGAAGATAGTCTTAATAATTTAGAAACTCCCTGCGCTTGTAGTGGCAGTCTTAAGGTATTCATTCACGCTTTAACTCCCCCACTTTTTTCATTTTGTCCAAGTTTTTATCTCTGCGTTGTAATTTTTTGTTTTTTTTATTTCTTTATTTTCTGAAAACCGGGATATCGGAGTTTCCGTCCCTCCCTTAAAGGGTATTATAGTTTAAGCATTTTCTAACAATCTCAAACCAGTCATTTCCCAAGGAAGCATGCCTTGAAGTCCTTAGCCTCAACCGCTGGGCTGTCCCTGGGGACGTTGAAGTTTTTTTGTTTTGGAAACTGAAATATAGGAGCACCCTGGTAAGCAGGCCCATCCCTAGACCAGCCACCGAGAGGCGTCGAAGGAAGACATGGGAGGTGTCTACAAATTGGAACTTTTGAGGGGAATGCCTTGAAAGCCCAAGCTTTCGACTATGGGGACTGTCCTGCCATTGTATTGGAATCTTTGGATGTACTTTCATATTGGTTCAATGGGGTTTAGTATTTTTCTGTTTCTTATTGTATTGGGGTTCCGGTTCAATGGGGTTTAAGTTTGTGTTCATTGCTTTGATACCCTTCTCTTTTTAATTGTTTTTGTTACTTCCTGTGTGATGTTCTTTTCGTGAAAGCAAGCTGGAAAAAGGGCATAAAATTAGAGTTTATCTGGTTTTTTCTTTTTCGTGACTGTAATGAATTAGATTTCCGTTTGAATTTTGTAGTTCCTTGACGAGAATTGTGTGACAAAATAATTTGGTTGTTTGCGTTCATTAGTTCTATTCACAGCTTGGTTGATTGTTTGGTTGCCTTTTCATCAATGCTATGGTTTTTTTTTTTACTGTTTTTGATTTCATCTCCTGATTAATAGTTATAAGAACAATTCTTTTGCCCAAACTTTTTTTTTTGTGCCAATTTCTATGCTCGACGAGAAACTTTGTGGTCTGGTATTGTGGTGTATCTTAGTTTATACGGTTGCTGGATGAAACTTTACTAGAAGAACTCTAATTAGGTTAGGCTATTTGAATTGACCAATATGAGCCTGTATGGTTGGTGGAATTGTTGGGCTTATTTGTTTATTAATCTCTTGTACGTGTCTGTTGATGTCTTTTTTGTCAGTATGCTCATAGAAAGTGCGTTCAGCATTGGTGCAATGAGAAAGGAGACATAACTTGTGAGATATGTCATCAGGTCTGCATGATGATTTTGATTTGATATGTCGACCATTTTGCTGTAATTTTAGAGTTGCAAATAAATTGCTGATATTATCTTTATACTTTAGTTTGCGTGCAAGTTTTCCTCCAGAATATTTTTGGAACTCATAATTCTTTGAAAATTTTAAAAATAAAATTGCATATTTTACACTAGGAGACTTTAGGGTGAACATGGGTTGGATTGAGGAGGTTTTCAACCCAACTCAAATTTTCAAGTTGGTCATTTTCCCAACCCAACCCAATTAAAGAGACAACCCAACCCCACCCTTAAATTTTCGAGTCGGGTTGGGTTGGGTCATTGGATCCAATAATAGATTATAAATACAAATATCTTTTATCAAATTAGTTCTACATTATACATAAATAAAATACAATCTTCAATCAAGGTAATGAAATGAATATAAATATTAAATATATAAAATATACAATAAAAAGTCACCCACTATTAATTCTGCAATCATGGTTCGTGTAGAAAATTCCAACTATAATATATAAAACAAATAAATAATTAAAACAACAAAAATAAATTACCTAATTCAACTCCCATAGAAAAAATATATAATTAAAACGATCAAAGATATTTTACATAATTTGACTATATATTTTATCATGATATATAAATTATAAAGATTTGAAAAAATATTAAAGAATATAGGAAATAAAAAGTCTAACAATAATAATTAAATTAAACAAATATATGCATATATAATTATATTATAGGTTAAATATATATTTTTAAACTAAATAATTATTTCGGGTTGGTCGGGTTGGGTTGGGTTAATTTTAGGTAAACCCAACCCATTAATATTTCATGATTTTGAACCCAACTCGTCAAATTGGATTGGGTTGGTTCGGGTTATTTGGGTTTCGGGTTGTTTGAACCAGTGTTTTCAAGGCCATCGCCTTGCACATAGGCAGGTATTGCGCCTCTAACGTAGCTAAGGCGAGCTCCTTCAATCAGGCCCTTGCCTTTCCCCGCCATTTTGCCCTGCATTGCCTCTGCCTTAGGCCAAGGCATGCGCCTTGTTAAAGTTTTATTTATTTATCAATATCCTAACTAAATATCCACAAAAAGAATCAAGAATTAGTTTATGAAGAAATCCAACAACTATGCGAAGTCTTTATTAAAGATATTGAATTTGTTTAATTGTTATTTCAAATATACGTGTCTGTTTATTCGAGTATTCGAGTTATTTGACGTAGAATCTTTGTTTTTTTATACTTTCAGTTAACTTCAATTTTTTTATACAAATAATAATTTAATATTATAGTATATCTTATAATAATAAATTTTTTGTGATTTATTATTCTTTCATTTTTTACTTTTTAGTATGTTTCCATATGAATTTGAAATTTTATGGGAATACACATGTTTTATTATCAATTTATAAATGCGCCTCTCTTCATTCGGGCCTCGCCTTTTTATCGCCTCTTGCTTTGAGGCGATCAAGGAGAGTATCGCTTTGCAATGCGCCTTGCGCTTTGAAAACATTGGTTTAACACCCCTACTGGGAGTTATTTATTTTTTTTAATTCTTTTTTTCACTATTAGTGTTTCCAAAACTGTATAAAAGTGCACGCTGAAGAAGGGTACCTACCCTATAAATCACGCACCTGATGTTTATTTTTATGAACTGTTTTATTTTAAATAAGAGGCATTTTTATTATATATGTAACGGTCCCTAAGGAGGGGTGGCGCAATGGTTGAAAACTTGGGATTTGAGGGTATACTTCCCTCAAAGCCCTAGGTTCGATAGTCACCTGTGACATTACTCCTTCGATGTCTCTGGTGCCTGACCTAGGGACGGGCGTGGTTACCTTATTTCAAAAAAATTATATATATATATATATAACGATGGTATCTTCCGGTGAAAGTGAGCTTAGCTCAATGGTGATTGACATGTTGTCAAGTGCTCAGACCTTCGAATTCCCCAATCTCCAAATTTTGAATTAAAAAAGAAAAGAAGATTTCTTCCGACTAGGGGGACTTTCAGATAAACATGCAAAATCCATAGGCTGAAGTTTGTTTGGATTACGGTTGTGATAGAATCTACCACACTATTTTATTAAACTACGATAAATCTCTCGAGAGAATCTCTCAGAGAGCCCAGAGTACAAAGACGACAATTCAATAGCTGATTGACAATGACCTAACAACTCCGATTTATAGCCCTAAATCCTAATTTGACCTAATTAATAAAAGACTAATAATAGGCCCAAACCCAATACATTTAAAATAGCAATTAACCAATAATTAATGAATACTAATATTCCTAAAATGCCAAGGACGGATCGTATCAATACTTTCCCCCCCAAGAGCCACCTTGTCCTCAAGGTGTTCCATCTCCGATGCCATCTCTTACAACCCCGTCTTTCTCGCAAAAAAATCATCACATCAAGCATCCCGGCACTCGTGCATCCCAACGACGACCCACACATCCAAGTTCGGAGCTCCTTCTTCCGCAACGATGTCTCCGAAAAAATTGTTCATCGCAATGGAAGCATAACCCTTTATCCTTCCGTGCTCGAATTTCGCCCAGTGAGTTTTTTTATAGGACGTCGGTTGAATGGTTGTAGTCCCTGTGAGAAAGAGTCGTTGTGCTTCCAGTTCCGAAACAATCGTTCTGCTTTAGCCTTGACCGTTGTAGGAGTCCTTCCTCATTTTGGGTAGCACGAAAAGCAAAATCATCCTCAATCACTTGGGCCATAAACATTTTCTCTTCGATGCCCATCGGCCGCAGATTTACGATCGCGCTCTGTATCTCCTCTTTTAGTCCACTTTCCCACTTCCTCTAATGCACTCGCGCGATATCGCGCATTCCCCTTAGCAAATCGCTCAAAATTCCGGCGATATTCCTTCACCGCACCTATTTGCTTCAAACTCATAAAGTTGGCGTATTTATTTGCTCGAGTGCGGTTGGAAACGCTCCAACAACCCATCTTTGAATTCGTTCAGAACGAAAAGGAGCACGATCCTCCTCATCATCAAGCCACTCCAATGCCTCCCCTTCTAAACATAACCCCGCCGCCTCAACCCCTTCATATCGATCCACTTGTTGACGAGAAAATAACGCTCGACTCGACTTAACCATCCCACCGGATCCTCGTCGGCCAAGACCTTTGAAAACCGGCATCTCAATTTCCTCGAATCTCCTGTCACACCCCGGTCCCTCCTTTCCTCCTACTCTCTGACTTCCCCGTTCGAGTCTTCCTTCTCCTCCCCACCCGAAATCTCGTCCCCTATTTCGGACATTGTCATTCCACCCCCTATCGTTCCAACCTTCATGCGCCAACGCCCTATCATAGCCCATGCGCAACCTCCTCTCCTCCAGAACCTTGTTTTCTCTCCCCACGACCCTTGGATCTCCCTTCCGCCGAACTCGGTCCGTGAAATCGTAGACCCAATTTCGGCCTCGATCGTTCCAACCGTCATGCGCTATTGGTCTGTCGTAACCAATGCGCACCCTCCTATCTTCTGGGAAACTGTTTCCCCTTCCGTCAACCCGTGGGTCCTCCTTGATGGCCGATGTCCGGCCGAAACCTTTCCCCGTCTCGTGCCCATGGAACCCATCTCTGGTCCAACCCGACGAACCTGCATCGACCGAACCGATCGACCCGACCCGACCAGTCCCCTTGACCGCGCCGCCCGCCATGCCACACGCCCGACCCGCAGCCCCACGCCCCGCTCGACCCCAACTCCGTGCGTTGCGAACCGGCCCGAGCCATCACGCGCCGCCCACGCCCACGCCCGACCCGCAGGCCCCACGCCCCCGCTCGACCCCAACTCGCTGGCTGCGGACCGGCCCGAGCTATCCGCGCCGCCCACGCCCACGCCCGACCCGCAGGCCCCACGCCCCCGCTCGACCCCAACTCGGCCGCCGCCCGGACCCCAGCCAGAACCATCCGCGCCGCCCACGCCCACGCCCGACCCACAGCCCCCACGCCAGCGCTCGCCTCCGACGCCGCACGCCACCTCGTTCGCGCCCCCGCTTGAGCCCCAACCCACGATCTCCGCCGCGCGGCGCTCGGCCCCGCCCGCGCTCGCTCCGCGCGCCGCTACGCTACGCGCCATTCACGCTCGCGCCCCAGCATGCGAGATCCCCAGCGCCGTTGCCGCTCGAGCTCCAGCCCGCGCGCCCGCCTACGACGTGGCCGTCACCCTCTGTCTGCGCCCAGCACTTTCCTCCAGTCGCCACGCACGACTACGCCGCCGCTCGGTCCCCCTCGGCCCCTGCGACACCCTCCGCGCCAGCCCCAGCCGTCGAGCTAGCCTCAGCCGCCCCGCTCTCCCCTTCCGATTCTGCCGCAACCCCTTTCCCTTTATCCGCGACAGCTGGTTCGGGATTCGACGGTTTCGGTTTGCGTTCTAAAAGCTTCTGCATGTTGAGATTCAACTGTCCAAATTCATGATCCATCCGACTCCCCATAGCTGCCAACTGAACCTCGAACTCTTTCTGTTTTTTTAGCATCTCGGCACCGTTTTCCTCACACTCTTGCATCCTGGTCTCCATCTTAGTACTCACCATTCCCGGATCGGCAAATGGCTCTGATACCAAAATGATAGAATCTACCATACTATTTTATTAAACTACGATAAATCTCTCGAGAGAATCTCTCAGAGAGCCCAGAGTACAAAGACGACAATTCAATAGCTGATTGACAATGACCTAACAACTCCTATTTATAGCCCTAAATCCTAATTTGACCTAATTAATAAAAGACTAATAATAGGCCCAAGCCCAATACATTTAAAATAGCAATTAACCAATAATTAATGAATACTAATATTCCTAAAATGCCAAGGACGGATCGTATCAGGTTGTAGGTGAGTGTGTTGTACGAGACTCCCATAAACAATAAAACTACTTAGGTGAAGAAAACTTTTGCCTTTTCCTGTTTTTGTTTCTTCTTTTCCTTTTGGTCTCTCTTTCTCCACCAGTCTCTATCACACACAATGACTGGGGTCTTTTTGCATTGGGTTGAATTTGGTATCAAGGAAGGTTATTCCAACTCTCTGAGGAGAATAGCAGCATTTTAATTGTTGGATTCCTCCTTCCTTATGCTCAACCACAAGTAATAGGATACCATCTGGGGTGTTCCATGTGGAGAAAGCTAGTTTGAGTATTATTGCCAGAGGTGGTAGAGGTAAAGGGTGGCTGCTATGAAAATGCAGGTTATTTAGTGCTGAGCGCGGTGATGGATGAGGCTTTGGTGGTTACTCGTGACTTCGGGCTTAGGAGATATTGCTGTTAATTGTTGTTTTTGGTGAAAAGTTGGTTAGATAACGGGTCTTACCCATTTCTTAGCACGGGGTTTCTGACTTAGGATATCAGGCTTCTCTTCTCCTTCGCATTTAATTCTTTCTCCGTTATCCTTGTGTTATTGTAATGTAACCCTTCTTATCCAAAAAACTGTAATGTAACCTTGTGGGCTTTCCACCTTCTAAGTTGGTTGGATGCCCTTTTTTTAAAATCTCAGTAAGTGTGCAAGTCAGCTTACGCACACCTTGACTATTCTTATGAGACATATTGCCTCACTCTTCAATATTTAGATGTCAAGAAAACTCATGGAAAATTATTCCTAGATAAGTGGCTACTATGAATTGAACTTTTAACCTCTGGGATCTACAAAGACTCTTTTTGACCACTAGGTCAAACATTCTATACATTGTATTCACGTTATATTTTCTTCTTCTATATAATATGCGATCTTCACTTTGTCCGTACGAGTTTCATGGTATGCTGCATAGTATCAGAAACTTTGCAGTTGCAGCTTCTTTTCTGATGAGATTTTTCTTCCTCATTTGTGCTGGTATGTTTTGTTCAATTGCCAGTCTTATCAACCTGGATACACTGCACCACCTCGTTCTGAAGAAACTGCTGTTGACATGGAGTAAGTTCAACCTTTTTGTTATTTTCTTTCGTCTTGAATCGATAAGCATGTTTCTGAAAGCCCGCAAGTGTTTTATTTTCATGTAATTTCTGTTTTATTTGAAATAATGATCCGGATATGTGGGGGTATGCACAGGGGAAGATGGACCATCAACGGAAATCCTTTAGACCTGAGAGATACTCGGCTACTGGCCATTGCAGAGGCCGAACGACATTTCCTGGAAGCCGAGTATGATGATGATGCTTCAAATGACAATGGAGCTGCGTTTGTCCGATCAGCTGCTCTTATTGTAGGTTTGCTAACATTAGTTTGTAGAACTCTTTTTTGCCCAAAAACTGAAATGATATTGCACTTTCCCCTCTAATATTTTCCATGCTACTCTATTGATCTGTTTTATTTTATGCGGCAGTTACTATCCCTTCTCCTGCTTCGGCATGCATTGACCATAACAGATCCGGACGGGGATGATGACATATCTGCCTTTTTCTCTGTGAGTGGAATACGAAATTATTTTCTTAAATTGGAAAGGGAAAATCAGAGTGCATAATGAGATGAGATGAGTTTATAATCTGAATGTACCTGTGACAGATTTTCTTGCTTCGTGCTGCTGGTTTTCTTTTACCCTGCTACATAATGGCCTGGGCCATCAGTATCGTGCAACGTCGAAGACAAAGACAGGTCGGTAATTCAAGAGTTCATATTTTTTGAAAAGAAATCTTATTACTATGTTGCAATCTAAATTTTATAATTTATGAATGGTTTGAAAACTGGAAAGTGAGATATTTTGTTTTTCTTGTTTCAAGTCCTATGGGGCAACCTTATTGGTTGAGGCTTGAGATGTCTAAGGTATGCTCCATTGTGAAAGTCTTAGGTTCGAAACCATGATTGAACTTAATTTTAAAATCTCTTGTTGTCTCTTGGGTCTAAGCATTGAGATGGGCACGGATATCTTTGGTTATGTAGTGGGACGTCCGGTAATACTAAACCAAATAGTGTCGGTTTTAAATTTTTAAAAAACAGAATTATTTCTGAAGTAAACTCTTAAATAAGTAGTTTAAGTCTTTAGGCTTATGTTGATATTTTTGTATGTTGTATGAAGCCTGAAAATTATAAGAGAAGTTGGGAACCTAATGAACTTTACAAATGTTGATAAGCATTTCCAATTGATTATCTATTGGGATTTCTTTGTATCTTCGATATTATCTTTGGATTGGCCATCGTTTCTTTTTTGTGGTAAAATACTACTTTGGTCCCTAACTTTGAATTTTGTTCCATTTTGATCCCCAAACTTTCAAAAGATCCTTAGATTTGTTCTTTTTTAGTCCAAGATTTGTTTCATCTTAGTCCTTCAACTTTCAAAAGTCCAATTTTGGTCTTTGTATTTAAAAAAAACTTAATTTGAAGTTAGTATTATTCGAAATTGATTCAATAATGTGATAAGGTTGGGCATAGGGCTCTATGTTAGCAATTACTTGGAGAGTAAGTTAGGATTTTGTTATAAATATGATGGGTTTAGGCATCCAAATTATTGAATGAGTTATTGAGTGATTTATTGTAGGGCTCAAGAGATTCTCTTAAGAGGGGAGGTTCCAAGACCTATCAAATCTTGTCTTATCTTTTATCTTTTACTTTTAATATTAATAGATCCTGGATCATATGAATTGGTATCAGAGCCGTTTCGATTCTTGGGTGTAGAGATGAATCAAGAAGAGATTCATTCATTCCAAGAAGGGTTGCAAACTTTGATGGCCTTGATTGATTCCTTTCGAAAAGAAATTAGAGAAGAACGAGAACAAAGAAGATTAGAGATGGAAGCTAGGATTCGAGGAAGAAGGAAGGTCGTGGAAGAAAAAGTGACGACTAGGGTTTTTACACCACCGCCACCATCGCCGCCACCACCTCCGACATCGCCGTCGCTGTCACCACCTCCTCCACCACCATCGTCGCCACCACCTCTCTGACATCGCCGCCGCCACCTCCACCATTGTTGCCGCCATTGCCATCACCTCTGCCATCACCGCCGTTTCCACCGCTGTCGCCACCAATGCCGCCGTTTCCGTCACCGACGCGTCGCTTCCGCAATCGCCGCTGCTGCCGCCGAAAAAAAATAATGTTTTCATTTTTTATTTTTCTATTTTTGTGTATGCCCACCTTGAGGACAATGAGCTTTAAAGGGGGCGGGTATTGATAAGGTTGGGACTAGGGCTTGGTTGGACCTAGAGCTCTATGTTAGCAATTACTTGGAGAGTAGGTTAAGATTTTGTTATAAATAGAGTGGGTTAGGTTAGAGTTTCGGCATCCAAATTATTGAATGAGTTATTGAGTGATTTATTCTAGGGCTCAAGAGATTCTTTTGAGAGGGGAGGTTTCAAGATCTATTAAATCTTGGCTTATCCTGTATCTTTTACTTTTGATATCAATCTAGATCCTGGATCATATCAATTGTTTTACGCCACCACCTTTGCCACTGCCACCACCATCGTCGCCACCACCTTCGACATCGTCGCCGTCACCACCTCTGACATCGCTGTCGCTGTCACCACCACTGACACTGCCGCCGCCATCGCCACCACCTCCGCCACCGTCGTCGTTTCCACCGCTGCTGCCACCGACTCTGCTGTTTTGGCCACCACCGACGCGCCGTTGCCGCAATCGCCGCTACTGCCGCCGGAAAAAAAAAATTGTTTTCATTTTTTATTTTTCTATTTTTGTGTATGCCCACCTTGAAGACAAGGTGTTTTAAAGGGGCGAGTATCAATAAGGTTGGGACTAGGGCTCAGTTGGGCTTAGGGTTCTATGTTAGCAATTATTTGGAGAGTAAGTTAGGATTTTGTTATAAATAGAGTGGGTTAGGTTAGGGTTTAGACATCCAAATTATTGAATGAGTTATTGAGTGATTTATGACTCAAGAGATTCTCTTGAGAGGGAGGTTCCAAGACCTATCAAATCTTGACTTATCCTGTATCTTTTACTTTTGATATTAATCTAGATCTTGAATCATATCATACTGTTAATAATTTTAATATACAATCAAAGACAAAATGTGCACATATTTCTAAAATTTATAAAGAAAAATGGTAAATTTTTTAAAGTAAACAATTTTATTTTTCTAAGGCCTAGTTTAAAGTTTTTTTTGAAACTCCTAAGACCGAAATGGAACAAATCTTAAAGTTTAGGGACTAAAAATGGACTTTGAAAAGTTTAGGGACTAAAACCGAATAAATCTCAAAGTTCAAAGACTAAAATTATGACTTTTGAAAATTCAGGGACCAAAATAGAACAAAATTCAAGAGCCAAATAGTATTTTATCCTTTGCATTTTCCATTTTATGCCTTGTTTCGATAGGTTAATTGTAACTTTGTCATATTATCATTTTTGCTTCCAATAAAAAAAACATTTCCAATTGAATAGAGAATTGTGGTTGTGAACTAACAGGAGGCGGCAACACTGGCTGCAACACAAGTGGCGTTTGTACTGCAGCATGGACAGCATAGAGGCTTACAATTTGCGATTGCATCAACAGGGCCACCTCTCACTCCTCACCCTCATCCTCACACTGATGTTTGAGCCACGCCCGCCAACCATGTTGTAATAAACCGAACATGAATAACTTTCTTCTACTTGCTCTCATCGTCGTATGTACCGACATTGCCCTGGCTCCTACTTGCAGCTCTGTTATCAGGTACCCTCACCAACAAACTCCTATTATTTTCATCTGTTTTGAGGTCATTCTAGTTAATGTTCCGATTTTATCATGCTGCTCGATGCTTCTCGAGAGCTAAACAAAAGACTTAGTGTGCTGTGTATTATGTACATTTTTTTATGTGGAGAGCAAGGAAGAAGTTTAGGGGATTTTTTATATTATGCACAATTTGTTGGGGGTGTTAAGAATTTGGTAATTGAATGTTAAATGAAAATAGTAGAGAGCATGTGAAAGATCACAGTTTTAGTGATTAAGTAAAATTTGACTACATTTTATTTTATATTTTGTGTTAAACTATGAAGGGGTAAATATTTATTTCAGAGTTGAAGGGCAGGG

mRNA sequence

AAACATATTTGAGTTGAAGCCGTTGGATTGGATTAAACTTAAAGAAAAACTCCGCCTATATATATTATATATACGAAGTTCTTCCATTTTTCAATTCTACGCACCTAACGGGCTTCGATTTCTTCCAGGGCTTTTGACCACAATGAGCGATCATCTCGTCCTGTATGTTGACCATTTGATTCCGCCGGTTTCTCCTGTCCCGCCTGTGCCCGAGCCGGTCGACCCTGTTCTTGACTCCGCCGCGGATGATCGGACGGCGGGCCTGGACGGACTTCATGAGGAGGAGCCGCTCATTCCGGCGGCGGAATGCCGCATTTGTCAGGAAGAAGATAGTCTTAATAATTTAGAAACTCCCTGCGCTTGTAGTGGCAGTCTTAAGTATGCTCATAGAAAGTGCGTTCAGCATTGGTGCAATGAGAAAGGAGACATAACTTGTGAGATATGTCATCAGTCTTATCAACCTGGATACACTGCACCACCTCGTTCTGAAGAAACTGCTGTTGACATGGAGGGAAGATGGACCATCAACGGAAATCCTTTAGACCTGAGAGATACTCGGCTACTGGCCATTGCAGAGGCCGAACGACATTTCCTGGAAGCCGAGTATGATGATGATGCTTCAAATGACAATGGAGCTGCGTTTGTCCGATCAGCTGCTCTTATTTTACTATCCCTTCTCCTGCTTCGGCATGCATTGACCATAACAGATCCGGACGGGGATGATGACATATCTGCCTTTTTCTCTATTTTCTTGCTTCGTGCTGCTGGTTTTCTTTTACCCTGCTACATAATGGCCTGGGCCATCAGTATCGTGCAACGTCGAAGACAAAGACAGGAGGCGGCAACACTGGCTGCAACACAAGTGGCGTTTGTACTGCAGCATGGACAGCATAGAGGCTTACAATTTGCGATTGCATCAACAGGGCCACCTCTCACTCCTCACCCTCATCCTCACACTGATGTTTGAGCCACGCCCGCCAACCATGTTGTAATAAACCGAACATGAATAACTTTCTTCTACTTGCTCTCATCGTCGTATGTACCGACATTGCCCTGGCTCCTACTTGCAGCTCTGTTATCAGGTACCCTCACCAACAAACTCCTATTATTTTCATCTGTTTTGAGGTCATTCTAGTTAATGTTCCGATTTTATCATGCTGCTCGATGCTTCTCGAGAGCTAAACAAAAGACTTAGTGTGCTGTGTATTATGTACATTTTTTTATGTGGAGAGCAAGGAAGAAGTTTAGGGGATTTTTTATATTATGCACAATTTGTTGGGGGTGTTAAGAATTTGGTAATTGAATGTTAAATGAAAATAGTAGAGAGCATGTGAAAGATCACAGTTTTAGTGATTAAGTAAAATTTGACTACATTTTATTTTATATTTTGTGTTAAACTATGAAGGGGTAAATATTTATTTCAGAGTTGAAGGGCAGGG

Coding sequence (CDS)

ATGAGCGATCATCTCGTCCTGTATGTTGACCATTTGATTCCGCCGGTTTCTCCTGTCCCGCCTGTGCCCGAGCCGGTCGACCCTGTTCTTGACTCCGCCGCGGATGATCGGACGGCGGGCCTGGACGGACTTCATGAGGAGGAGCCGCTCATTCCGGCGGCGGAATGCCGCATTTGTCAGGAAGAAGATAGTCTTAATAATTTAGAAACTCCCTGCGCTTGTAGTGGCAGTCTTAAGTATGCTCATAGAAAGTGCGTTCAGCATTGGTGCAATGAGAAAGGAGACATAACTTGTGAGATATGTCATCAGTCTTATCAACCTGGATACACTGCACCACCTCGTTCTGAAGAAACTGCTGTTGACATGGAGGGAAGATGGACCATCAACGGAAATCCTTTAGACCTGAGAGATACTCGGCTACTGGCCATTGCAGAGGCCGAACGACATTTCCTGGAAGCCGAGTATGATGATGATGCTTCAAATGACAATGGAGCTGCGTTTGTCCGATCAGCTGCTCTTATTTTACTATCCCTTCTCCTGCTTCGGCATGCATTGACCATAACAGATCCGGACGGGGATGATGACATATCTGCCTTTTTCTCTATTTTCTTGCTTCGTGCTGCTGGTTTTCTTTTACCCTGCTACATAATGGCCTGGGCCATCAGTATCGTGCAACGTCGAAGACAAAGACAGGAGGCGGCAACACTGGCTGCAACACAAGTGGCGTTTGTACTGCAGCATGGACAGCATAGAGGCTTACAATTTGCGATTGCATCAACAGGGCCACCTCTCACTCCTCACCCTCATCCTCACACTGATGTTTGA

Protein sequence

MSDHLVLYVDHLIPPVSPVPPVPEPVDPVLDSAADDRTAGLDGLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQSYQPGYTAPPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDDDASNDNGAAFVRSAALILLSLLLLRHALTITDPDGDDDISAFFSIFLLRAAGFLLPCYIMAWAISIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIASTGPPLTPHPHPHTDV

Homology

[Close]

BLAST of Sed0020561 vs. NCBI nr
Match: KAG6598983.1 (putative apyrase 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 483.8 bits (1244), Expect = 9.8e-133
Identity = 245/290 (84.48%), Postives = 255/290 (87.93%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPVSPVPPVPEPVDP--------VLDSAA----------DDRTAGLD 60
           MSDHLVLYVDHLIPPV+PV PV +PVDP        V DSAA          DDRT   D
Sbjct: 562 MSDHLVLYVDHLIPPVAPVQPVSDPVDPVPSAPREGVSDSAAAIPSCSTATVDDRTVEQD 621

Query: 61  GLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120
             +EE+PLI AAECRICQEED+LNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH
Sbjct: 622 APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 681

Query: 121 QSYQPGYTAPPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDD-DASN 180
           QSYQPGYTAPPRSEET +DMEGRWTI GNPLDLRDTRLLAIAEAER+FLEAEYDD  ASN
Sbjct: 682 QSYQPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRLLAIAEAERNFLEAEYDDYAASN 741

Query: 181 DNGAAFVRSAALILLSLLLLRHALTITDPDGDDDISAFFSIFLLRAAGFLLPCYIMAWAI 240
           D+GAAF RSAALILL+LLLLRHALTITDPDGDDD SAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 742 DSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWAI 801

Query: 241 SIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIASTGPPLTPHPHPH 272
           SI+QRRRQRQEAA LAATQVAFVLQHGQHRGLQFAIAS GPPLTPHPHPH
Sbjct: 802 SILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPHPHPH 851

[Close]

BLAST of Sed0020561 vs. NCBI nr
Match: XP_022946694.1 (uncharacterized protein LOC111450687 [Cucurbita moschata])

HSP 1 Score: 483.8 bits (1244), Expect = 9.8e-133
Identity = 245/290 (84.48%), Postives = 255/290 (87.93%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPVSPVPPVPEPVDP--------VLDSA----------ADDRTAGLD 60
           MSDHLVLYVDHLIPPV+PV PV +PVDP        V DSA          ADDRT   D
Sbjct: 1   MSDHLVLYVDHLIPPVAPVQPVSDPVDPVPSAPREGVSDSAAAIPSCSTATADDRTVEQD 60

Query: 61  GLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120
             +EE+PLI AAECRICQEED+LNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH
Sbjct: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120

Query: 121 QSYQPGYTAPPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDD-DASN 180
           QSYQPGYTAPPRSEET +DMEGRWTI GNPLDLRDTRLLAIAEAER+FLEAEYDD  ASN
Sbjct: 121 QSYQPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRLLAIAEAERNFLEAEYDDYAASN 180

Query: 181 DNGAAFVRSAALILLSLLLLRHALTITDPDGDDDISAFFSIFLLRAAGFLLPCYIMAWAI 240
           D+GAAF RSAALILL+LLLLRHALTITDPDGDDD SAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIASTGPPLTPHPHPH 272
           SI+QRRRQRQEAA LAATQVAFVLQHGQHRGLQFAIAS GPPLTPHPHPH
Sbjct: 241 SILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPHPHPH 290

[Close]

BLAST of Sed0020561 vs. NCBI nr
Match: XP_022144437.1 (uncharacterized protein LOC111014120 [Momordica charantia])

HSP 1 Score: 482.6 bits (1241), Expect = 2.2e-132
Identity = 245/292 (83.90%), Postives = 256/292 (87.67%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPVSPVPPVPEPVDP--------VLDSA------------ADDRTAG 60
           MSDHLVLYVDHLI PV+PV PV EP DP        V+DSA            ADDRT  
Sbjct: 1   MSDHLVLYVDHLIRPVAPVEPVSEPADPVPSAPREAVVDSAAAGPSCSTATAVADDRTVK 60

Query: 61  LDGLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI 120
               +EEEPLI AAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI
Sbjct: 61  QHAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI 120

Query: 121 CHQSYQPGYTAPPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDDDA- 180
           CHQSYQPGYTAPPR+EETA+DMEGRWTI+GNPLDLRDTRLLAIAEAERHFLEAEYDD A 
Sbjct: 121 CHQSYQPGYTAPPRTEETAIDMEGRWTISGNPLDLRDTRLLAIAEAERHFLEAEYDDYAT 180

Query: 181 SNDNGAAFVRSAALILLSLLLLRHALTITDPDGDDDISAFFSIFLLRAAGFLLPCYIMAW 240
           SND+GAAF RSAALILL+LLLLRHALTITDPDG+DD SAFFSIFLLRAAGFLLPCYIMAW
Sbjct: 181 SNDSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAW 240

Query: 241 AISIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIASTGPPLTPHPHPH 272
           AISI+QRRRQRQEAA LAATQVAFVLQHGQHRGLQFAIAS+GPPLTPHPHPH
Sbjct: 241 AISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASSGPPLTPHPHPH 292

[Close]

BLAST of Sed0020561 vs. NCBI nr
Match: XP_023547303.1 (uncharacterized protein LOC111806165 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.9 bits (1239), Expect = 3.7e-132
Identity = 244/290 (84.14%), Postives = 254/290 (87.59%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPVSPVPPVPEPVDP--------VLDSA----------ADDRTAGLD 60
           MSDHLVLYVDHLIPPV+PV PV +PVDP        V DSA          ADDRT   D
Sbjct: 1   MSDHLVLYVDHLIPPVAPVQPVSDPVDPIPSAPREGVSDSAAAIPSSSTATADDRTVEQD 60

Query: 61  GLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120
             +EE+PLI AAECRICQEED+LNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH
Sbjct: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120

Query: 121 QSYQPGYTAPPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDD-DASN 180
           QSYQPGYTAPPRSEET +DMEGRWTI GNPLDLRDTRLLAIAEAER+FLEAEYDD  ASN
Sbjct: 121 QSYQPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRLLAIAEAERNFLEAEYDDYAASN 180

Query: 181 DNGAAFVRSAALILLSLLLLRHALTITDPDGDDDISAFFSIFLLRAAGFLLPCYIMAWAI 240
           D+GAAF RSAALILL+LLLLRHALTITDPDGDDD SAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIASTGPPLTPHPHPH 272
           SI+QRRRQRQEAA LAATQVAFVLQHGQHRGLQFAIAS GPPL PHPHPH
Sbjct: 241 SILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLAPHPHPH 290

[Close]

BLAST of Sed0020561 vs. NCBI nr
Match: XP_038890663.1 (uncharacterized protein LOC120080164 [Benincasa hispida] >XP_038890664.1 uncharacterized protein LOC120080164 [Benincasa hispida])

HSP 1 Score: 481.5 bits (1238), Expect = 4.9e-132
Identity = 242/292 (82.88%), Postives = 253/292 (86.64%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPVSPVPPVPEPVDPV--------------------LDSAADDRTAG 60
           MSDHLVLYVDHLI PV+PV PV +PVDP+                      + ADDRT  
Sbjct: 1   MSDHLVLYVDHLIRPVAPVQPVSDPVDPLPSAPREAVANSPAAAAGPSCSTATADDRTVE 60

Query: 61  LDGLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI 120
            D  +EEEPLI AAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI
Sbjct: 61  QDAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI 120

Query: 121 CHQSYQPGYTAPPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDD-DA 180
           CHQSYQPGYTAPPRSEETA+D+EGRWTI GNP+DLRDTRLLAIAEAERHFLEAEYDD  A
Sbjct: 121 CHQSYQPGYTAPPRSEETAIDIEGRWTIAGNPIDLRDTRLLAIAEAERHFLEAEYDDYAA 180

Query: 181 SNDNGAAFVRSAALILLSLLLLRHALTITDPDGDDDISAFFSIFLLRAAGFLLPCYIMAW 240
           SND+GAAF RSAALILL+LLLLRHALTITDPDGDDD SAFFSIFLLRAAGFLLPCYIMAW
Sbjct: 181 SNDSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAW 240

Query: 241 AISIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIASTGPPLTPHPHPH 272
           AISI+QRRRQRQEAA LAATQVAFVLQHGQHRGLQFAIAS GPPLTPHPHPH
Sbjct: 241 AISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPHPHPH 292

[Close]

BLAST of Sed0020561 vs. ExPASy Swiss-Prot
Match: A0JN69 (E3 ubiquitin-protein ligase MARCHF3 OS=Bos taurus OX=9913 GN=MARCHF3 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07
Identity = 23/59 (38.98%), Postives = 32/59 (54.24%), Query Frame = 0


Query: 44  LHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 103
           L  + P      CRIC E  S  +L +PC C+G+L   HR C++HW +      CE+CH
Sbjct: 59  LATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH 117

[Close]

BLAST of Sed0020561 vs. ExPASy Swiss-Prot
Match: Q86UD3 (E3 ubiquitin-protein ligase MARCHF3 OS=Homo sapiens OX=9606 GN=MARCHF3 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07
Identity = 23/59 (38.98%), Postives = 32/59 (54.24%), Query Frame = 0


Query: 44  LHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 103
           L  + P      CRIC E  S  +L +PC C+G+L   HR C++HW +      CE+CH
Sbjct: 59  LATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH 117

[Close]

BLAST of Sed0020561 vs. ExPASy Swiss-Prot
Match: Q8BRX9 (E3 ubiquitin-protein ligase MARCHF3 OS=Mus musculus OX=10090 GN=Marchf3 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07
Identity = 23/59 (38.98%), Postives = 32/59 (54.24%), Query Frame = 0


Query: 44  LHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 103
           L  + P      CRIC E  S  +L +PC C+G+L   HR C++HW +      CE+CH
Sbjct: 59  LATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH 117

[Close]

BLAST of Sed0020561 vs. ExPASy Swiss-Prot
Match: Q5XIE5 (E3 ubiquitin-protein ligase MARCHF3 OS=Rattus norvegicus OX=10116 GN=Marchf3 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07
Identity = 23/59 (38.98%), Postives = 32/59 (54.24%), Query Frame = 0


Query: 44  LHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 103
           L  + P      CRIC E  S  +L +PC C+G+L   HR C++HW +      CE+CH
Sbjct: 59  LATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH 117

[Close]

BLAST of Sed0020561 vs. ExPASy Swiss-Prot
Match: Q3TZ87 (E3 ubiquitin-protein ligase MARCHF9 OS=Mus musculus OX=10090 GN=Marchf9 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07
Identity = 31/93 (33.33%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 14  PPVSPVPPVPEPVDPVLDSAADDRTAGLDGLHEEEPLIPAAECRICQEEDSLNNLETPCA 73
           PP +P PP P  +D +  S++ D      GL          +CRIC +      L +PC 
Sbjct: 80  PPPAPPPPPPGALDALSLSSSLD-----SGLR-------TPQCRICFQGPEQGELLSPCR 139

Query: 74  CSGSLKYAHRKCVQHWCNEKGDITCEICHQSYQ 107
           C GS++  H+ C+  W +E+G  +CE+C+  YQ
Sbjct: 140 CDGSVRCTHQPCLIRWISERGSWSCELCYFKYQ 160

[Close]

BLAST of Sed0020561 vs. ExPASy TrEMBL
Match: A0A6J1G4K7 (uncharacterized protein LOC111450687 OS=Cucurbita moschata OX=3662 GN=LOC111450687 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 4.8e-133
Identity = 245/290 (84.48%), Postives = 255/290 (87.93%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPVSPVPPVPEPVDP--------VLDSA----------ADDRTAGLD 60
           MSDHLVLYVDHLIPPV+PV PV +PVDP        V DSA          ADDRT   D
Sbjct: 1   MSDHLVLYVDHLIPPVAPVQPVSDPVDPVPSAPREGVSDSAAAIPSCSTATADDRTVEQD 60

Query: 61  GLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120
             +EE+PLI AAECRICQEED+LNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH
Sbjct: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120

Query: 121 QSYQPGYTAPPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDD-DASN 180
           QSYQPGYTAPPRSEET +DMEGRWTI GNPLDLRDTRLLAIAEAER+FLEAEYDD  ASN
Sbjct: 121 QSYQPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRLLAIAEAERNFLEAEYDDYAASN 180

Query: 181 DNGAAFVRSAALILLSLLLLRHALTITDPDGDDDISAFFSIFLLRAAGFLLPCYIMAWAI 240
           D+GAAF RSAALILL+LLLLRHALTITDPDGDDD SAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIASTGPPLTPHPHPH 272
           SI+QRRRQRQEAA LAATQVAFVLQHGQHRGLQFAIAS GPPLTPHPHPH
Sbjct: 241 SILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPHPHPH 290

[Close]

BLAST of Sed0020561 vs. ExPASy TrEMBL
Match: A0A6J1CTP2 (uncharacterized protein LOC111014120 OS=Momordica charantia OX=3673 GN=LOC111014120 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132
Identity = 245/292 (83.90%), Postives = 256/292 (87.67%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPVSPVPPVPEPVDP--------VLDSA------------ADDRTAG 60
           MSDHLVLYVDHLI PV+PV PV EP DP        V+DSA            ADDRT  
Sbjct: 1   MSDHLVLYVDHLIRPVAPVEPVSEPADPVPSAPREAVVDSAAAGPSCSTATAVADDRTVK 60

Query: 61  LDGLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI 120
               +EEEPLI AAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI
Sbjct: 61  QHAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI 120

Query: 121 CHQSYQPGYTAPPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDDDA- 180
           CHQSYQPGYTAPPR+EETA+DMEGRWTI+GNPLDLRDTRLLAIAEAERHFLEAEYDD A 
Sbjct: 121 CHQSYQPGYTAPPRTEETAIDMEGRWTISGNPLDLRDTRLLAIAEAERHFLEAEYDDYAT 180

Query: 181 SNDNGAAFVRSAALILLSLLLLRHALTITDPDGDDDISAFFSIFLLRAAGFLLPCYIMAW 240
           SND+GAAF RSAALILL+LLLLRHALTITDPDG+DD SAFFSIFLLRAAGFLLPCYIMAW
Sbjct: 181 SNDSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAW 240

Query: 241 AISIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIASTGPPLTPHPHPH 272
           AISI+QRRRQRQEAA LAATQVAFVLQHGQHRGLQFAIAS+GPPLTPHPHPH
Sbjct: 241 AISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASSGPPLTPHPHPH 292

[Close]

BLAST of Sed0020561 vs. ExPASy TrEMBL
Match: A0A6J1IBB6 (uncharacterized protein LOC111471364 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471364 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129
Identity = 242/291 (83.16%), Postives = 254/291 (87.29%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPVSPVPPVPEPVDP--------VLDSA----------ADDRTAGLD 60
           MSDHLVLYVDHLIPPV+PV PV +PVDP        V DSA          ADDRT   D
Sbjct: 1   MSDHLVLYVDHLIPPVAPVQPVSDPVDPVPSAPREGVSDSAAAIPSSSTATADDRTVEQD 60

Query: 61  GLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120
             +EE+PLI AAECRICQEED+LNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH
Sbjct: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120

Query: 121 QSYQPGYTAPPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDD-DASN 180
           QSYQPGY+AP RSEET +DMEGRWTI GNPLDLRDTRLLAIAEAER+FLEAEYDD  ASN
Sbjct: 121 QSYQPGYSAPLRSEETVIDMEGRWTIAGNPLDLRDTRLLAIAEAERNFLEAEYDDYAASN 180

Query: 181 DNGAAFVRSAALILLSLLLLRHALTITDPDG-DDDISAFFSIFLLRAAGFLLPCYIMAWA 240
           D+GAAF RSAALILL+LLLLRHALTITDPDG DDD +AFFSIFLLRAAGFLLPCYIMAWA
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGDDDDAAAFFSIFLLRAAGFLLPCYIMAWA 240

Query: 241 ISIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIASTGPPLTPHPHPH 272
           ISI+QRRRQRQEAA LAATQVAFVLQHGQHRGLQFAIAS GPPLTPHPHPH
Sbjct: 241 ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPHPHPH 291

[Close]

BLAST of Sed0020561 vs. ExPASy TrEMBL
Match: A0A6J1I5Y1 (uncharacterized protein LOC111471364 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471364 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129
Identity = 242/291 (83.16%), Postives = 254/291 (87.29%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPVSPVPPVPEPVDP--------VLDSA----------ADDRTAGLD 60
           MSDHLVLYVDHLIPPV+PV PV +PVDP        V DSA          ADDRT   D
Sbjct: 1   MSDHLVLYVDHLIPPVAPVQPVSDPVDPVPSAPREGVSDSAAAIPSSSTATADDRTVEQD 60

Query: 61  GLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120
             +EE+PLI AAECRICQEED+LNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH
Sbjct: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120

Query: 121 QSYQPGYTAPPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDD-DASN 180
           QSYQPGY+AP RSEET +DMEGRWTI GNPLDLRDTRLLAIAEAER+FLEAEYDD  ASN
Sbjct: 121 QSYQPGYSAPLRSEETVIDMEGRWTIAGNPLDLRDTRLLAIAEAERNFLEAEYDDYAASN 180

Query: 181 DNGAAFVRSAALILLSLLLLRHALTITDPDG-DDDISAFFSIFLLRAAGFLLPCYIMAWA 240
           D+GAAF RSAALILL+LLLLRHALTITDPDG DDD +AFFSIFLLRAAGFLLPCYIMAWA
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGDDDDAAAFFSIFLLRAAGFLLPCYIMAWA 240

Query: 241 ISIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIASTGPPLTPHPHPH 272
           ISI+QRRRQRQEAA LAATQVAFVLQHGQHRGLQFAIAS GPPLTPHPHPH
Sbjct: 241 ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPHPHPH 291

[Close]

BLAST of Sed0020561 vs. ExPASy TrEMBL
Match: A0A0A0LN28 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G100580 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 8.7e-127
Identity = 235/293 (80.20%), Postives = 250/293 (85.32%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPVSPVPPV-----PEPVDPVLDS--------------AADDRTAGL 60
           MSDHLVLYVD+LIPP  P+ P      P+P + + DS               A DRT   
Sbjct: 1   MSDHLVLYVDNLIPPAPPLQPASDLLHPQPSEALPDSPAPAPAPGPSCSTATAHDRTVET 60

Query: 61  DGLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEIC 120
           D  +E++PLI  AECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEIC
Sbjct: 61  DAPNEDDPLIQVAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEIC 120

Query: 121 HQSYQPGYTAPPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDD-DAS 180
           HQ YQPGYTAPPRSEETA+DMEGRWTI GNPLDLRDTRLLAIAEAERHFLEA+YDD  AS
Sbjct: 121 HQPYQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEADYDDYAAS 180

Query: 181 NDNGAAFVRSAALILLSLLLLRHALTITDPDGDDDISAFFSIFLLRAAGFLLPCYIMAWA 240
           ND+GAAF RSAALILL+LLLLRHALTITDPDGDDD SAFFSIF+LRAAGFLLPCYIMAWA
Sbjct: 181 NDSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFMLRAAGFLLPCYIMAWA 240

Query: 241 ISIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIASTG-PPLTPHPHPHT 273
           ISI+QRRRQRQEAA LAATQVAFVLQHGQHRGLQFAIASTG PPLTPHPHPH+
Sbjct: 241 ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASTGPPPLTPHPHPHS 293

[Close]

BLAST of Sed0020561 vs. TAIR 10
Match: AT3G47550.3 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 300.8 bits (769), Expect = 1.1e-81
Identity = 156/231 (67.53%), Postives = 182/231 (78.79%), Query Frame = 0


Query: 46  EEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQSY 105
           EEEPL+ + ECRICQEEDS  NLE PCAC+GSLKYAHRKCVQ WCNEKGDITCEICHQ Y
Sbjct: 59  EEEPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPY 118

Query: 106 QPGYTA--PPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDD-DASND 165
           Q GYTA  PP  +ET + +   W  NG PLDL D R+LA+A AERHFLEA+YD+   +N 
Sbjct: 119 QHGYTAPPPPPPDETIIHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYDEYSENNS 178

Query: 166 NGAAFVRSAALILLSLLLLRHALTI-TDPDGDDDISAFFSIFLLRAAGFLLPCYIMAWAI 225
           +GAAF RSAALIL++LLLLR AL + T+PD +DD +AFFS+FLLRAAGFLLPCYIMAWAI
Sbjct: 179 SGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAI 238

Query: 226 SIVQRRRQRQEAATLAATQVAFVLQHG--QHRGLQFAIASTGPPLTPHPHP 271
            I+QRRRQRQEAA LAA +V F++  G  Q RGL FA+A   PP++  P P
Sbjct: 239 GILQRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQ-PPISNVPTP 287

[Close]

BLAST of Sed0020561 vs. TAIR 10
Match: AT3G47550.6 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 300.8 bits (769), Expect = 1.1e-81
Identity = 156/231 (67.53%), Postives = 182/231 (78.79%), Query Frame = 0


Query: 46  EEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQSY 105
           EEEPL+ + ECRICQEEDS  NLE PCAC+GSLKYAHRKCVQ WCNEKGDITCEICHQ Y
Sbjct: 59  EEEPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPY 118

Query: 106 QPGYTA--PPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLEAEYDD-DASND 165
           Q GYTA  PP  +ET + +   W  NG PLDL D R+LA+A AERHFLEA+YD+   +N 
Sbjct: 119 QHGYTAPPPPPPDETIIHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYDEYSENNS 178

Query: 166 NGAAFVRSAALILLSLLLLRHALTI-TDPDGDDDISAFFSIFLLRAAGFLLPCYIMAWAI 225
           +GAAF RSAALIL++LLLLR AL + T+PD +DD +AFFS+FLLRAAGFLLPCYIMAWAI
Sbjct: 179 SGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAI 238

Query: 226 SIVQRRRQRQEAATLAATQVAFVLQHG--QHRGLQFAIASTGPPLTPHPHP 271
            I+QRRRQRQEAA LAA +V F++  G  Q RGL FA+A   PP++  P P
Sbjct: 239 GILQRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQ-PPISNVPTP 287

[Close]

BLAST of Sed0020561 vs. TAIR 10
Match: AT5G62460.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 297.4 bits (760), Expect = 1.2e-80
Identity = 157/247 (63.56%), Postives = 188/247 (76.11%), Query Frame = 0


Query: 35  DDRTAGLDGLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKG 94
           ++ T   D   EEEPLI + ECRICQEEDS+ NLE+PC+CSGSLKYAHRKCVQ WCNEKG
Sbjct: 57  EETTEQRDVDDEEEPLIQSVECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKG 116

Query: 95  DITCEICHQSYQPGYTA--PPRSEETAVDMEGRWTINGNPLDLRDTRLLAIAEAERHFLE 154
           D TCEICH+SYQPGYTA  PP +++T +D+   W  NG  LDL D R+LA+A AERHF +
Sbjct: 117 DTTCEICHKSYQPGYTAPPPPPADDTIIDIGEDWG-NGVHLDLNDPRILAMAAAERHFFD 176

Query: 155 AEYDDDA-SNDNGAAFVRSAALILLSLLLLRHALTITD---PDGDDDISAFFSIFLLRAA 214
           A+YD+ A SN +GAAF RSAALIL++LLLLRHAL +T+    D +DD SAFF +F+LRAA
Sbjct: 177 ADYDEYADSNSSGAAFCRSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAA 236

Query: 215 GFLLPCYIMAWAISIVQRRRQRQEAATLAATQVAFVLQHG------QHRGLQFAIASTGP 270
           GFLLPCYIMAWAISI+QRRRQRQEAA LAA +VAF+L  G      +  GL FA+    P
Sbjct: 237 GFLLPCYIMAWAISILQRRRQRQEAAALAAAEVAFMLHSGGGGGGQRRGGLHFAVP---P 296

[Close]

BLAST of Sed0020561 vs. TAIR 10
Match: AT2G02960.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 290.0 bits (741), Expect = 1.9e-78
Identity = 157/238 (65.97%), Postives = 182/238 (76.47%), Query Frame = 0


Query: 27  DPVLDSAADDRTAGLDGLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCV 86
           D  LD + DD         E EPLI + ECRIC +E  + NLE+PCACSGSLKYAHRKCV
Sbjct: 20  DKALDISDDDHD------DENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCV 79

Query: 87  QHWCNEKGDITCEICHQSYQPGYTAPP---RSEETAVDMEGRWTINGNPLDLRDTRLLAI 146
           Q WCNEKG+I CEICHQ YQPGYTAPP   + EET +D+ G WTI+G  LD+ D RLLAI
Sbjct: 80  QRWCNEKGNIICEICHQPYQPGYTAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAI 139

Query: 147 AEAERHFLEAEY-DDDASNDNGAAFVRSAALILLSLLLLRHALTIT-DPDG-DDDISAFF 206
           AEAER +LE+EY +  AS+ +GAAF RSAALIL++LLLLRHALTIT D DG +DD S+  
Sbjct: 140 AEAERRYLESEYVEYTASSASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSIL 199

Query: 207 SIFLLRAAGFLLPCYIMAWAISIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIA 259
           S+ LLRAAGFLLPCYIMAWAISI+QRRRQRQEAA L ATQ A VLQ GQ R + F ++
Sbjct: 200 SLVLLRAAGFLLPCYIMAWAISILQRRRQRQEAAAL-ATQFALVLQSGQPRTVHFTVS 248

[Close]

BLAST of Sed0020561 vs. TAIR 10
Match: AT2G02960.4 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 290.0 bits (741), Expect = 1.9e-78
Identity = 157/238 (65.97%), Postives = 182/238 (76.47%), Query Frame = 0


Query: 27  DPVLDSAADDRTAGLDGLHEEEPLIPAAECRICQEEDSLNNLETPCACSGSLKYAHRKCV 86
           D  LD + DD         E EPLI + ECRIC +E  + NLE+PCACSGSLKYAHRKCV
Sbjct: 20  DKALDISDDDHD------DENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCV 79

Query: 87  QHWCNEKGDITCEICHQSYQPGYTAPP---RSEETAVDMEGRWTINGNPLDLRDTRLLAI 146
           Q WCNEKG+I CEICHQ YQPGYTAPP   + EET +D+ G WTI+G  LD+ D RLLAI
Sbjct: 80  QRWCNEKGNIICEICHQPYQPGYTAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAI 139

Query: 147 AEAERHFLEAEY-DDDASNDNGAAFVRSAALILLSLLLLRHALTIT-DPDG-DDDISAFF 206
           AEAER +LE+EY +  AS+ +GAAF RSAALIL++LLLLRHALTIT D DG +DD S+  
Sbjct: 140 AEAERRYLESEYVEYTASSASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSIL 199

Query: 207 SIFLLRAAGFLLPCYIMAWAISIVQRRRQRQEAATLAATQVAFVLQHGQHRGLQFAIA 259
           S+ LLRAAGFLLPCYIMAWAISI+QRRRQRQEAA L ATQ A VLQ GQ R + F ++
Sbjct: 200 SLVLLRAAGFLLPCYIMAWAISILQRRRQRQEAAAL-ATQFALVLQSGQPRTVHFTVS 248

The following BLAST results are available for this feature:

BLAST of Sed0020561 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6598983.1	9.8e-133	84.48	putative apyrase 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022946694.1	9.8e-133	84.48	uncharacterized protein LOC111450687 [Cucurbita moschata]	[more]
XP_022144437.1	2.2e-132	83.90	uncharacterized protein LOC111014120 [Momordica charantia]	[more]
XP_023547303.1	3.7e-132	84.14	uncharacterized protein LOC111806165 [Cucurbita pepo subsp. pepo]	[more]
XP_038890663.1	4.9e-132	82.88	uncharacterized protein LOC120080164 [Benincasa hispida] >XP_038890664.1 unchara...	[more]

BLAST of Sed0020561 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0JN69	1.0e-07	38.98	E3 ubiquitin-protein ligase MARCHF3 OS=Bos taurus OX=9913 GN=MARCHF3 PE=2 SV=1	[more]
Q86UD3	1.0e-07	38.98	E3 ubiquitin-protein ligase MARCHF3 OS=Homo sapiens OX=9606 GN=MARCHF3 PE=1 SV=1	[more]
Q8BRX9	1.0e-07	38.98	E3 ubiquitin-protein ligase MARCHF3 OS=Mus musculus OX=10090 GN=Marchf3 PE=2 SV=...	[more]
Q5XIE5	1.0e-07	38.98	E3 ubiquitin-protein ligase MARCHF3 OS=Rattus norvegicus OX=10116 GN=Marchf3 PE=...	[more]
Q3TZ87	1.0e-07	33.33	E3 ubiquitin-protein ligase MARCHF9 OS=Mus musculus OX=10090 GN=Marchf9 PE=2 SV=...	[more]

BLAST of Sed0020561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4K7	4.8e-133	84.48	uncharacterized protein LOC111450687 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]
A0A6J1CTP2	1.1e-132	83.90	uncharacterized protein LOC111014120 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1IBB6	1.1e-129	83.16	uncharacterized protein LOC111471364 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1I5Y1	1.1e-129	83.16	uncharacterized protein LOC111471364 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0LN28	8.7e-127	80.20	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G10058...	[more]

BLAST of Sed0020561 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47550.3	1.1e-81	67.53	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT3G47550.6	1.1e-81	67.53	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G62460.1	1.2e-80	63.56	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.2	1.9e-78	65.97	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.4	1.9e-78	65.97	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 55..102 e-value: 5.2E-21 score: 85.8
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 56..101 e-value: 4.4E-13 score: 49.1
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 48..108 score: 22.690145
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 107..221 e-value: 1.2E-37 score: 129.1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 46..111 e-value: 1.1E-19 score: 71.7
None	No IPR available	PANTHER	PTHR23012:SF181	E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED	coord: 1..237
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 56..102 e-value: 8.93808E-19 score: 75.4416
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 54..106
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 1..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020561.1	Sed0020561.1	mRNA
Sed0020561.2	Sed0020561.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding