Sed0020298 (gene) Chayote v1

Overview


Name	Sed0020298
Type	gene
Organism	Sechium edule (Chayote v1)
Description	GPI-anchored protein
Location	LG07: 42819794 .. 42824153 (+)
RNA-Seq Expression	Sed0020298
Synteny	Sed0020298

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAACTAACAAGAAAAAAAAAAGACGTAGAAAGTTTTTTAGAAAAAGAAAATACAAAAAAAGAATCTTATTTTATAGTGGAAATTCAACTAAACAGCCTGTACTCGCGTTCTGGTCGGAGAAGAAGAAACAACCTTCTTTCTCTCGCCGGAATCATGCTCTCCGATCGATCCTTCAGCCACTTCTCAACGCTTCTCTTCTTCTTCTTTCTTTCAACGCTTTTCTCTGCTTCTTCCTCCGCTTCAATTTCAGGTAAAACTCACATTCCCAATCAATCATGCTCGATCCCTATATTCTCGATTTCTTGCTTCTTTTGCTTCTTCATTACTGATTTCCTCATCTCCGATTTTCTTTGCAGTTCATGTATTTGAATCCAAGCCTTCAATTGCTCGGAGCCTCCTACAGGAGAAAACAGGTTTTCCCCTCTTTCTTCGATTTTTTTTTTTTTTTCTGATTTCGTATTTGAATTCAATATAATTGTTGTAAGCAGGTTTCTGTTTAGTTTGTGGTTGTTCTGTGTGTATGAGATCTTGCCGATCTGCGATTCCTTTTTTCTTTTTCTTTTTTCTTATCGAGATTTTGTGATTGTTACTCTAGATTTAATGTAATGTATATAATATTACTCTAGATTTAGGGTTGTGTATATATATAGAGAGATACTTATCCTATTTGGAAAATTCATCAGAAATAAGACTTTTGTTCTTCTCATTTTCTGATCAATATGGTATAGAGTTCCATATGTTATTGGTCTCCCAAATTTCGATTCCATCAAAATATTTGTATCCACTCAATCGAGTAAGCGAAAGCAAGTATTTGAGATATTGACTGTTCCAGTCTCATTATCAATTGGTTTTGAGGTAGAATTTCATAAAGGTTAAAATGTCATTTTGGTCCCTCGACTTTCAAGTTTGTTCCATTTTGGTCCCTCGACTTTCAAATGTTTAATTTTAGTCGTTCGACTTTCATGTTTGTTTCATTTTGGTCCCTAGACTTTCAAATGTCCAAATTTAGTCCTTAGACTTTTTAAAATATTTAAAAATAGTCCTTGCTAAGTTAAAAAAAAAATTAACACCATTAACTTCAAATATTCTTCTTGTTCTTCATTCTTTTGCTTCTCCATTTGGAAGCTCTGTTTTTCTTTATTATCACTTTTTTTCATTTGTTCCAAACATACCTATACCCAACTTGTACTAAAAAATACCTAATGGTATTTTATTCCTAATGATACCACCAATTCTTGCCTGGCACCATCTTCTTTCTCATCACCTTCAGTCCACTCTTTCAAGATCATCCCAATAAACCCCATAAATTTGCTTTCATTTTCTTGTAGTCACATTTTTCTGGGTTTTGAATATAAAGGTAGTTAGAGTCGTTTTTAGTTTTAGCAAAAACACATTGCCAACTTTTTCACATTTTTAGATGAAATAAATTTGTGGATTTTTCATCTTCTAAAAATTAATTACAATTCTATCCAAGACCGAATCCAAAAATCAAAATCTTAACAGGGTGGATTAATCAATGAATTTGGGGCTTTTAGGTGTGTAAAGAATATTTATTTTGACAATATATTAGAATTTATGTGCGAAAAAATAAAAATTCTGGAAACTTGTTCATTCATTATTGTGTTTATCTCCTTCGCTGGCAAGTCAACCACCAAACTCCGTCTCACACTCCGATCCCATCAACACCTGCTCACTGCCTAGAAAGGGGTATAGGTATGTTTGGAACAAATGGGAAAAAAAACAGAGCTTCCAAATGGAGAAGCAAAAGAATGAAGAAGAAGAATATTTGAAGTTAACTTAGCAAGGACTATTTTTAAACATTTTAAAAAGTCTAGGGACCAAGTTTGGACATTTGAAAGTGTAGGGACTAAAATTAAACAAACATGAAAGTCGAGGGACTAAAATTAAACATTTGAAAGTCGAGGGATCAAAATGGAACAAACTTGAAAGTCGAAGGACCAAAATGGTATTTTAACCTATTATTTACTAATTAGTTTTCTGGGATCGGAGACCAATTAGTCAAATATATCTGACTTGACTAATTGGTTTTCTCGGATCTACTGGTGTTTTTCTTGGGTTTTTATTTTGCTACCATTGCCTTGAAAAAATAGGAAATTCAGCAGAATTTTATTGGGTTGAATTGAATGATTTGCTTAATTCATATTGGATTGTTCCACCTATCCGTAATTTACGCCGTGGTTCAGTGACGGAAAGTTGGAAAAAAAAAATGTAGAATAAGGAAAATGTGTATTTCTTCCTTCAGATTAATTGATGTCCTGTTTTAGTACTCATGGATTTTTTTTTTTTTTTAGTATAGAAATATGAAATTCGAATATGAGACTTCTAGATCGAAGATACATGCCAATTTTTATTGATATCAGCTCACTTTGACAGTACTCTTAGATTATTTATGGTGGGTATTTTGCATTAAGGGGGTTTTCCCAAAGTGGGCTCAAGATAAAAATGTCTAAATTTTCTCTTTCAAGAGTTTTTTATACGTAAATTATGGAACTTGTTATGACATCCGAGACAAAAAAAATAAAGATTTTCGTAGTTAGTGCACTACCATGAAACCCTATTACAACATATGACTTAATACATAAAAGTGCAATACAAAAATATAAACTCAATTACATATTTCAACTTGGTAATCGTGGGGCATCATAGTTCATAAACTTATCTCAAATGAAATCTTAGTTGAAAGATCTTGAACTTATGGTTTTATCATTTTCTTATAACTTTTCCAAGCTTATGTATGAGTTATGACAATGATTTGTCAGATGAGTTTGTTGTATTCTGTAAAAGCTTGTGAAGCTGATTATCCGTTGCATCTGCTTCTTGTGTCTAAAGGAAATTCCAAATGAAGATCAACCTCTCAATTTACTACCACCTTATTAAATATCAACTTCAGTAGATAACAAATTACAGAATTAAAGAAACTTTTGGTTAGCTTTTGATTTGAGATCTGGCACTTGAGGCATAAGTTTGTCTCTTTTTCTTTAATTGTTTCATTTTTTATCCATTTGTTAGACAATCTATAAGATTTTTTATGAAGCAGATAGGATTAGAAGCATGTTTTTATATTCCTTGGTATATGCTAGATTAATCTTTAGATTTCACATCAATTACTCAAGGGGAATGGGCAGCATTTGGTACATTTTATTGTAAGGAAAACCATTAGATTGCTTAAAAAATTTCTAAAGAAAAATGGAAGAGTGGCCTCCCAAACATAAGTGATCATAATCATATCACTCATAGAAGGTGTTTATATATAGAATTGTAGTCATTATTTTGAGTGATTATAAATGAAAGGTTATTTTGAGTGATTAAAAATTTGAGTTTTAGTAATGGCTCGTTAGGATGTGGTTATTTGTAGAGGGTATAGTTAATAGCTCATTTGGATAATGGTTTTTGTAGAGGAGTTGCAGACAATAGATCATTTAGATGTGGTTAGAAATGAGTGACCAGAAATGAATGATTAGAATTAGTGGAATAATTATTTTGTTACTCCATTTGGATATGATTGTTTGTGGACAAGTTGTAAAAATTCATGTGTAATAACTCGTTAATTATGTCAAACAAAAACCTCCCATAGAGTTACCCCCTCTAGATTCCAATTAGATATTATGCCTTACATTATCTGTGTTTTATAAGAAATCTGTACTTCTGATGCTATGTTAAGACAAATTTGGTCTAATCATGTAATACTACACAATTTATGCAGCTTGTCTAGTGAACTTTGAATTATTGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCTCAATACCCTCCGTCTCTCTGTTGTCCCGCTTTGACCGAATTCGCTTGCCCTTACGCTGCAGATATCAACGCGGTAACAAATGATTGCGCTTCAACCATGTTCAGCTACATTAATCTGCATGGAAAATACCCTCCTGGTCTATTCTCTAACGAGTGCAAGGGTGATAAGATTGGTCTGGCATGCCATGCGCTCCCGCCCTCTGCTTCAGCCGATCTAAATTGGGGTTCGGTAACACGCTTGCCATCTCGTTTGCTTATCCTCTCAGCTGGATTCATACTGCTGTTTTGGCTATCATGATAAGGTTCAGGTGACTACCATTTTTCACCATTCTTTCTTCCAATTTGTAACTGTGCCTTAAACTTGCTGCAATTCTTTACTCTCATGTATTTATTATCATAGTTTATTCTATTCCATTCAGCTAAACTTGTGTATTCTACTACTTTAATAGCTGAGGAAAGTGAGATTTTGTTCATGAGATTGAACTGCAAAAGTTCTTATATAAGGTTTCTGGTGTATCATCATCTGTGATATATATATTACATTTTATTATATCATGTAAAAGTTCTATTTAA

mRNA sequence

GTTAACTAACAAGAAAAAAAAAAGACGTAGAAAGTTTTTTAGAAAAAGAAAATACAAAAAAAGAATCTTATTTTATAGTGGAAATTCAACTAAACAGCCTGTACTCGCGTTCTGGTCGGAGAAGAAGAAACAACCTTCTTTCTCTCGCCGGAATCATGCTCTCCGATCGATCCTTCAGCCACTTCTCAACGCTTCTCTTCTTCTTCTTTCTTTCAACGCTTTTCTCTGCTTCTTCCTCCGCTTCAATTTCAGTTCATGTATTTGAATCCAAGCCTTCAATTGCTCGGAGCCTCCTACAGGAGAAAACAGCTTGTCTAGTGAACTTTGAATTATTGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCTCAATACCCTCCGTCTCTCTGTTGTCCCGCTTTGACCGAATTCGCTTGCCCTTACGCTGCAGATATCAACGCGGTAACAAATGATTGCGCTTCAACCATGTTCAGCTACATTAATCTGCATGGAAAATACCCTCCTGGTCTATTCTCTAACGAGTGCAAGGGTGATAAGATTGGTCTGGCATGCCATGCGCTCCCGCCCTCTGCTTCAGCCGATCTAAATTGGGGTTCGGTAACACGCTTGCCATCTCGTTTGCTTATCCTCTCAGCTGGATTCATACTGCTGTTTTGGCTATCATGATAAGGTTCAGGTGACTACCATTTTTCACCATTCTTTCTTCCAATTTGTAACTGTGCCTTAAACTTGCTGCAATTCTTTACTCTCATGTATTTATTATCATAGTTTATTCTATTCCATTCAGCTAAACTTGTGTATTCTACTACTTTAATAGCTGAGGAAAGTGAGATTTTGTTCATGAGATTGAACTGCAAAAGTTCTTATATAAGGTTTCTGGTGTATCATCATCTGTGATATATATATTACATTTTATTATATCATGTAAAAGTTCTATTTAA

Coding sequence (CDS)

ATGCTCTCCGATCGATCCTTCAGCCACTTCTCAACGCTTCTCTTCTTCTTCTTTCTTTCAACGCTTTTCTCTGCTTCTTCCTCCGCTTCAATTTCAGTTCATGTATTTGAATCCAAGCCTTCAATTGCTCGGAGCCTCCTACAGGAGAAAACAGCTTGTCTAGTGAACTTTGAATTATTGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCTCAATACCCTCCGTCTCTCTGTTGTCCCGCTTTGACCGAATTCGCTTGCCCTTACGCTGCAGATATCAACGCGGTAACAAATGATTGCGCTTCAACCATGTTCAGCTACATTAATCTGCATGGAAAATACCCTCCTGGTCTATTCTCTAACGAGTGCAAGGGTGATAAGATTGGTCTGGCATGCCATGCGCTCCCGCCCTCTGCTTCAGCCGATCTAAATTGGGGTTCGGTAACACGCTTGCCATCTCGTTTGCTTATCCTCTCAGCTGGATTCATACTGCTGTTTTGGCTATCATGA

Protein sequence

MLSDRSFSHFSTLLFFFFLSTLFSASSSASISVHVFESKPSIARSLLQEKTACLVNFELLNYTIITSKCKGPQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLFSNECKGDKIGLACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWLS

Homology

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BLAST of Sed0020298 vs. NCBI nr
Match: KAG6592129.1 (GPI-anchored protein LLG1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.3 bits (656), Expect = 9.3e-65
Identity = 131/169 (77.51%), Postives = 141/169 (83.43%), Query Frame = 0


Query: 1   MLSDRSFSHFSTLLFFFFLSTLFSASSSASISVHVFESKPSIARSLLQEKTACLVNFELL 60
           M+SDRSF +FS LL  FFLS LFS SSS SIS  VFESK  I RSLLQ + AC VNFE L
Sbjct: 1   MVSDRSFCNFSMLL-LFFLSLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFL 60

Query: 61  NYTIITSKCKGPQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLF 120
           NYTIITSKCKGP+YPP  CCPALTEFACPYA D+N +TNDCASTMFSYINL+GKYPPGLF
Sbjct: 61  NYTIITSKCKGPRYPPEQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLF 120

Query: 121 SNECKGDKIGLACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWL 170
           S+ECKG K GL C ALPPSASADLNWGS+ RLPSR LILS GF+LL WL
Sbjct: 121 SSECKGGKQGLECPALPPSASADLNWGSIARLPSRSLILSTGFLLLLWL 168

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BLAST of Sed0020298 vs. NCBI nr
Match: XP_022936417.1 (GPI-anchored protein LLG1 [Cucurbita moschata])

HSP 1 Score: 255.8 bits (652), Expect = 2.7e-64
Identity = 130/169 (76.92%), Postives = 140/169 (82.84%), Query Frame = 0


Query: 1   MLSDRSFSHFSTLLFFFFLSTLFSASSSASISVHVFESKPSIARSLLQEKTACLVNFELL 60
           M+SDRSF +FS LL  FFLS LFS SSS SIS  VFESK  I RSLLQ + AC VNFE L
Sbjct: 1   MVSDRSFCNFSMLL-LFFLSLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFL 60

Query: 61  NYTIITSKCKGPQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLF 120
           NYTIITSKCKGP+YPP  CCPALTEFACPYA D+N +TNDCASTMFSYINL+GKYPPGLF
Sbjct: 61  NYTIITSKCKGPRYPPEQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLF 120

Query: 121 SNECKGDKIGLACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWL 170
           S+ECKG K GL C ALPPS SADLNWGS+ RLPSR LILS GF+LL WL
Sbjct: 121 SSECKGGKQGLECPALPPSTSADLNWGSIARLPSRSLILSTGFLLLLWL 168

[Close]

BLAST of Sed0020298 vs. NCBI nr
Match: XP_023536509.1 (GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo] >XP_023536510.1 GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.8 bits (652), Expect = 2.7e-64
Identity = 130/169 (76.92%), Postives = 140/169 (82.84%), Query Frame = 0


Query: 1   MLSDRSFSHFSTLLFFFFLSTLFSASSSASISVHVFESKPSIARSLLQEKTACLVNFELL 60
           M+SDRSF +FS +L  FFLS LFS SSS SIS  VFESK  I RSLLQ + AC VNFE L
Sbjct: 52  MVSDRSFCNFS-MLILFFLSLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFL 111

Query: 61  NYTIITSKCKGPQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLF 120
           NYTIITSKCKGP+YPP  CCPALTEFACPYA D+N +TNDCASTMFSYINL+GKYPPGLF
Sbjct: 112 NYTIITSKCKGPRYPPEQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLF 171

Query: 121 SNECKGDKIGLACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWL 170
           S+ECKG K GL C ALPPS SADLNWGS+ RLPSR LILS GFILL WL
Sbjct: 172 SSECKGGKQGLECPALPPSTSADLNWGSIARLPSRSLILSTGFILLLWL 219

[Close]

BLAST of Sed0020298 vs. NCBI nr
Match: KAG7025004.1 (GPI-anchored protein LLG1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.4 bits (651), Expect = 3.5e-64
Identity = 130/169 (76.92%), Postives = 140/169 (82.84%), Query Frame = 0


Query: 1   MLSDRSFSHFSTLLFFFFLSTLFSASSSASISVHVFESKPSIARSLLQEKTACLVNFELL 60
           M+SDRSF +FS LL  FFLS LFS SSS SIS  VFESK  I RSLLQ + AC VNFE L
Sbjct: 1   MVSDRSFCNFSMLL-LFFLSLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFL 60

Query: 61  NYTIITSKCKGPQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLF 120
           NYTIITSKCKGP+YPP  CCPALTEFACPYA D+N +TNDCASTMFSYINL+GKYPPGLF
Sbjct: 61  NYTIITSKCKGPRYPPEQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLF 120

Query: 121 SNECKGDKIGLACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWL 170
           S+ECKG K GL C ALPPSASADLNWGS+  LPSR LILS GF+LL WL
Sbjct: 121 SSECKGGKQGLECPALPPSASADLNWGSIAHLPSRSLILSTGFLLLLWL 168

[Close]

BLAST of Sed0020298 vs. NCBI nr
Match: XP_022976292.1 (GPI-anchored protein LLG1-like [Cucurbita maxima])

HSP 1 Score: 253.1 bits (645), Expect = 1.7e-63
Identity = 128/169 (75.74%), Postives = 140/169 (82.84%), Query Frame = 0


Query: 1   MLSDRSFSHFSTLLFFFFLSTLFSASSSASISVHVFESKPSIARSLLQEKTACLVNFELL 60
           M+S+RSF +FS LL  FF+S LFS SSS SIS  VFESK  I RSLLQ + AC VNFE L
Sbjct: 1   MVSNRSFCNFSMLL-LFFISLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFL 60

Query: 61  NYTIITSKCKGPQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLF 120
           NYTIITSKCKGP+YPP  CCPALTEFACPYA D+N +TNDCASTMFSYINL+GKYPPGLF
Sbjct: 61  NYTIITSKCKGPRYPPKQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLF 120

Query: 121 SNECKGDKIGLACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWL 170
           S+ECKG K GL C ALPPS SADLNWGS+ RLPSR LILS GF+LL WL
Sbjct: 121 SSECKGGKQGLECPALPPSTSADLNWGSIARLPSRSLILSTGFLLLLWL 168

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BLAST of Sed0020298 vs. ExPASy Swiss-Prot
Match: Q9FKT1 (GPI-anchored protein LLG1 OS=Arabidopsis thaliana OX=3702 GN=LLG1 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.8e-40
Identity = 89/159 (55.97%), Postives = 111/159 (69.81%), Query Frame = 0


Query: 13  LLFFFFLSTLFSASSSASISVHVFESKPSI-ARSLLQEKTACLVNFELLNYTIITSKCKG 72
           L FF  LS L S SSS+ IS  VFES+  +  R+LLQ K  C VNFE +NYTIITSKCKG
Sbjct: 8   LFFFLLLSVLSSFSSSSFISDGVFESQSLVLGRNLLQTKKTCPVNFEFMNYTIITSKCKG 67

Query: 73  PQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLFSNECKGDKIGL 132
           P+YPP  CC A  +FACPY   +N +++DCA+TMFSYINL+GKYPPGLF+N+CK  K GL
Sbjct: 68  PKYPPKECCGAFKDFACPYTDQLNDLSSDCATTMFSYINLYGKYPPGLFANQCKEGKEGL 127

Query: 133 ACHA---LPPSASADLNWGSVTRLPSRLLILSAGFILLF 168
            C A   LPP  SA++N  + T   SRL +  +  +L+F
Sbjct: 128 ECPAGSQLPPETSAEVN--AATTSSSRLWLTVSAALLVF 164

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BLAST of Sed0020298 vs. ExPASy Swiss-Prot
Match: B3GS44 (GPI-anchored protein LORELEI OS=Arabidopsis thaliana OX=3702 GN=LRE PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 8.8e-34
Identity = 76/158 (48.10%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 13  LLFFFFLSTLFSASSSASISVHVFESKPSIA-RSLLQEKTACLVNFELLNYTIITSKCKG 72
           LLFFF ++ L S SSS+SIS  VFES+ S++ R+L   K  C VNFE ++Y ++T +CKG
Sbjct: 5   LLFFFLMALLVSLSSSSSISDGVFESQTSVSGRNLRHAKKKCEVNFEYMDYKVLTKRCKG 64

Query: 73  PQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLFSNECKGDKIGL 132
           P +P   CC A  EFACPY + IN + +DCA TMFSY+N++G YP GLF+NEC+  K GL
Sbjct: 65  PAFPAKECCSAFKEFACPYVSQINDMNSDCAQTMFSYMNIYGNYPTGLFANECRERKDGL 124

Query: 133 ACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWL 170
            C  LPP  S +LN  +    P  + +L +    +F L
Sbjct: 125 VC-PLPPLYSHNLNASTADSTPRFISLLISAATAVFAL 161

[Close]

BLAST of Sed0020298 vs. ExPASy Swiss-Prot
Match: Q9M0I0 (GPI-anchored protein LLG3 OS=Arabidopsis thaliana OX=3702 GN=LLG3 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-32
Identity = 67/137 (48.91%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 28  SASISVHVFESKPSIARSLLQEKTACLVNFELLNYTIITSKCKGPQYPPSLCCPALTEFA 87
           S  IS+  FES PS +R+LLQ K  C  +F   NYTIITSKCKGP YP  +CC A  +FA
Sbjct: 23  SHHISLDEFESHPSTSRALLQAKATCKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFA 82

Query: 88  CPYAADINAVTNDCASTMFSYINLHGKYPPGLFSNECKGDKIGLACHALPPSASADLNWG 147
           CP+A  +N    DCASTMFSYINL+G+YPPG+F+N CK  K GL C  + P++S+     
Sbjct: 83  CPFAEVLNDEKTDCASTMFSYINLYGRYPPGIFANMCKEGKEGLDCTDVTPTSSSH---A 142

Query: 148 SVTRLPSRLLILSAGFI 165
           S+  + + +L+++   +
Sbjct: 143 SIPLVSTHVLLITVSIL 156

[Close]

BLAST of Sed0020298 vs. ExPASy Swiss-Prot
Match: Q6NLF4 (GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG2 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.0e-31
Identity = 70/145 (48.28%), Postives = 93/145 (64.14%), Query Frame = 0


Query: 27  SSASISVHVFESKPSIARSLLQEKTACLVNFELLNYTIITSKCKGPQYPPSLCCPALTEF 86
           S  S+S   F+   + +R+LLQ +T C  +F   NYTIITS+CKGP YP ++CC A  +F
Sbjct: 18  SGFSLSYDEFDGHAATSRALLQTRTTCKEDFANKNYTIITSRCKGPNYPANVCCSAFKDF 77

Query: 87  ACPYAADINAVTNDCASTMFSYINLHGKYPPGLFSNECKGDKIGLACHALPPSASADLNW 146
           ACP+A  +N   NDCASTMFSYINL+G+YPPG+F+N CK  K GL C  +  SASA  + 
Sbjct: 78  ACPFAEVLNDEKNDCASTMFSYINLYGRYPPGIFANMCKEGKEGLDCTDVTQSASATSDS 137

Query: 147 GSVTRLPSRLLILSAGFIL-LFWLS 171
                  + L +LS   +L L +LS
Sbjct: 138 IPRASTTASLAVLSTFLVLCLLFLS 162

[Close]

BLAST of Sed0020298 vs. ExPASy TrEMBL
Match: A0A6J1F8E1 (GPI-anchored protein LLG1 OS=Cucurbita moschata OX=3662 GN=LOC111443044 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.3e-64
Identity = 130/169 (76.92%), Postives = 140/169 (82.84%), Query Frame = 0


Query: 1   MLSDRSFSHFSTLLFFFFLSTLFSASSSASISVHVFESKPSIARSLLQEKTACLVNFELL 60
           M+SDRSF +FS LL  FFLS LFS SSS SIS  VFESK  I RSLLQ + AC VNFE L
Sbjct: 1   MVSDRSFCNFSMLL-LFFLSLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFL 60

Query: 61  NYTIITSKCKGPQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLF 120
           NYTIITSKCKGP+YPP  CCPALTEFACPYA D+N +TNDCASTMFSYINL+GKYPPGLF
Sbjct: 61  NYTIITSKCKGPRYPPEQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLF 120

Query: 121 SNECKGDKIGLACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWL 170
           S+ECKG K GL C ALPPS SADLNWGS+ RLPSR LILS GF+LL WL
Sbjct: 121 SSECKGGKQGLECPALPPSTSADLNWGSIARLPSRSLILSTGFLLLLWL 168

[Close]

BLAST of Sed0020298 vs. ExPASy TrEMBL
Match: A0A6J1IFC4 (GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111476731 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.5e-64
Identity = 128/169 (75.74%), Postives = 140/169 (82.84%), Query Frame = 0


Query: 1   MLSDRSFSHFSTLLFFFFLSTLFSASSSASISVHVFESKPSIARSLLQEKTACLVNFELL 60
           M+S+RSF +FS LL  FF+S LFS SSS SIS  VFESK  I RSLLQ + AC VNFE L
Sbjct: 1   MVSNRSFCNFSMLL-LFFISLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFL 60

Query: 61  NYTIITSKCKGPQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLF 120
           NYTIITSKCKGP+YPP  CCPALTEFACPYA D+N +TNDCASTMFSYINL+GKYPPGLF
Sbjct: 61  NYTIITSKCKGPRYPPKQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLF 120

Query: 121 SNECKGDKIGLACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWL 170
           S+ECKG K GL C ALPPS SADLNWGS+ RLPSR LILS GF+LL WL
Sbjct: 121 SSECKGGKQGLECPALPPSTSADLNWGSIARLPSRSLILSTGFLLLLWL 168

[Close]

BLAST of Sed0020298 vs. ExPASy TrEMBL
Match: A0A6J1J2M4 (GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111480694 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.2e-63
Identity = 125/168 (74.40%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 2   LSDRSFSHFSTLLFFFFLSTLFSASSSASISVHVFESKPSIARSLLQEKTACLVNFELLN 61
           +SDRSF +FS LL  FF+S LF+ASSS SIS  VFESK SI R LLQ K  C VNFE LN
Sbjct: 3   VSDRSFCNFSMLL-LFFISLLFTASSSTSISADVFESKASIGRGLLQAKKPCPVNFEFLN 62

Query: 62  YTIITSKCKGPQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLFS 121
           YTIIT KCKGPQYPP LCC ALTEFACPY+ D+N  TNDCASTMFSY+NL+GKYPPGLFS
Sbjct: 63  YTIITGKCKGPQYPPKLCCSALTEFACPYSDDLNDPTNDCASTMFSYVNLYGKYPPGLFS 122

Query: 122 NECKGDKIGLACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWL 170
           +ECKGDK GLAC  LPPSASAD +WGS+  LPSRLLI S GF+LL WL
Sbjct: 123 SECKGDKNGLACPVLPPSASADQSWGSIANLPSRLLIFSPGFVLLLWL 169

[Close]

BLAST of Sed0020298 vs. ExPASy TrEMBL
Match: A0A6J1FTS4 (GPI-anchored protein LLG1-like OS=Cucurbita moschata OX=3662 GN=LOC111446763 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.7e-62
Identity = 124/168 (73.81%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 2   LSDRSFSHFSTLLFFFFLSTLFSASSSASISVHVFESKPSIARSLLQEKTACLVNFELLN 61
           +SDRSF +FS LL  FF+S LF+ASSS SISV VFESK SI R LLQ K AC VNFE L+
Sbjct: 3   VSDRSFCNFSMLL-LFFISLLFTASSSTSISVDVFESKASIGRGLLQAKKACPVNFEFLD 62

Query: 62  YTIITSKCKGPQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLFS 121
           Y+IIT KCKGP+YPP LCC ALTEFACPYA D+N  TNDCASTMFSY+NL+GKYPPGLFS
Sbjct: 63  YSIITGKCKGPRYPPELCCSALTEFACPYADDLNDPTNDCASTMFSYVNLYGKYPPGLFS 122

Query: 122 NECKGDKIGLACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWL 170
           +EC GDK GLAC  LPPSASAD +WGS+  LPSRLLI S GF+LL WL
Sbjct: 123 SECTGDKNGLACPVLPPSASADQSWGSIAHLPSRLLIFSPGFVLLLWL 169

[Close]

BLAST of Sed0020298 vs. ExPASy TrEMBL
Match: A0A6J1CGJ1 (GPI-anchored protein LLG1-like OS=Momordica charantia OX=3673 GN=LOC111010609 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.8e-58
Identity = 119/169 (70.41%), Postives = 135/169 (79.88%), Query Frame = 0


Query: 1   MLSDRSFSHFSTLLFFFFLSTLFSASSSASISVHVFESKPSIARSLLQEKTACLVNFELL 60
           M+SDR F +FS LL  FFLS LFS SS  SIS  VFES+ SI RSLLQ K AC VNFE L
Sbjct: 1   MVSDRYFCNFS-LLLLFFLSLLFSPSSFTSISGDVFESQVSIGRSLLQAKKACPVNFEFL 60

Query: 61  NYTIITSKCKGPQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLF 120
           NYTIITS+CKGPQYP  LCCPALT+FACPYA ++N ++NDC+STMFSYINL+GKYPPGLF
Sbjct: 61  NYTIITSRCKGPQYPTDLCCPALTDFACPYAEELNDLSNDCSSTMFSYINLYGKYPPGLF 120

Query: 121 SNECKGDKIGLACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWL 170
           S+EC+  K GL C A PPS S+DLNWGS+T  PSR L L AGF+LL WL
Sbjct: 121 SSECRAGKEGLPCPAQPPSTSSDLNWGSITSFPSRSLFLVAGFVLLSWL 168

[Close]

BLAST of Sed0020298 vs. TAIR 10
Match: AT5G56170.1 (LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 )

HSP 1 Score: 165.6 bits (418), Expect = 3.4e-41
Identity = 89/159 (55.97%), Postives = 111/159 (69.81%), Query Frame = 0


Query: 13  LLFFFFLSTLFSASSSASISVHVFESKPSI-ARSLLQEKTACLVNFELLNYTIITSKCKG 72
           L FF  LS L S SSS+ IS  VFES+  +  R+LLQ K  C VNFE +NYTIITSKCKG
Sbjct: 8   LFFFLLLSVLSSFSSSSFISDGVFESQSLVLGRNLLQTKKTCPVNFEFMNYTIITSKCKG 67

Query: 73  PQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLFSNECKGDKIGL 132
           P+YPP  CC A  +FACPY   +N +++DCA+TMFSYINL+GKYPPGLF+N+CK  K GL
Sbjct: 68  PKYPPKECCGAFKDFACPYTDQLNDLSSDCATTMFSYINLYGKYPPGLFANQCKEGKEGL 127

Query: 133 ACHA---LPPSASADLNWGSVTRLPSRLLILSAGFILLF 168
            C A   LPP  SA++N  + T   SRL +  +  +L+F
Sbjct: 128 ECPAGSQLPPETSAEVN--AATTSSSRLWLTVSAALLVF 164

[Close]

BLAST of Sed0020298 vs. TAIR 10
Match: AT4G26466.1 (lorelei )

HSP 1 Score: 144.8 bits (364), Expect = 6.2e-35
Identity = 76/158 (48.10%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 13  LLFFFFLSTLFSASSSASISVHVFESKPSIA-RSLLQEKTACLVNFELLNYTIITSKCKG 72
           LLFFF ++ L S SSS+SIS  VFES+ S++ R+L   K  C VNFE ++Y ++T +CKG
Sbjct: 5   LLFFFLMALLVSLSSSSSISDGVFESQTSVSGRNLRHAKKKCEVNFEYMDYKVLTKRCKG 64

Query: 73  PQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYINLHGKYPPGLFSNECKGDKIGL 132
           P +P   CC A  EFACPY + IN + +DCA TMFSY+N++G YP GLF+NEC+  K GL
Sbjct: 65  PAFPAKECCSAFKEFACPYVSQINDMNSDCAQTMFSYMNIYGNYPTGLFANECRERKDGL 124

Query: 133 ACHALPPSASADLNWGSVTRLPSRLLILSAGFILLFWL 170
            C  LPP  S +LN  +    P  + +L +    +F L
Sbjct: 125 VC-PLPPLYSHNLNASTADSTPRFISLLISAATAVFAL 161

[Close]

BLAST of Sed0020298 vs. TAIR 10
Match: AT4G28280.2 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3 )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 67/137 (48.91%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 28  SASISVHVFESKPSIARSLLQEKTACLVNFELLNYTIITSKCKGPQYPPSLCCPALTEFA 87
           S  IS+  FES PS +R+LLQ K  C  +F   NYTIITSKCKGP YP  +CC A  +FA
Sbjct: 23  SHHISLDEFESHPSTSRALLQAKATCKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFA 82

Query: 88  CPYAADINAVTNDCASTMFSYINLHGKYPPGLFSNECKGDKIGLACHALPPSASADLNWG 147
           CP+A  +N    DCASTMFSYINL+G+YPPG+F+N CK  K GL C  + P++S+     
Sbjct: 83  CPFAEVLNDEKTDCASTMFSYINLYGRYPPGIFANMCKEGKEGLDCTDVTPTSSSH---A 142

Query: 148 SVTRLPSRLLILSAGFI 165
           S+  + + +L+++   +
Sbjct: 143 SIPLVSTHVLLITVSIL 156

[Close]

BLAST of Sed0020298 vs. TAIR 10
Match: AT2G20700.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 2 )

HSP 1 Score: 135.2 bits (339), Expect = 5.0e-32
Identity = 70/145 (48.28%), Postives = 93/145 (64.14%), Query Frame = 0


Query: 27  SSASISVHVFESKPSIARSLLQEKTACLVNFELLNYTIITSKCKGPQYPPSLCCPALTEF 86
           S  S+S   F+   + +R+LLQ +T C  +F   NYTIITS+CKGP YP ++CC A  +F
Sbjct: 18  SGFSLSYDEFDGHAATSRALLQTRTTCKEDFANKNYTIITSRCKGPNYPANVCCSAFKDF 77

Query: 87  ACPYAADINAVTNDCASTMFSYINLHGKYPPGLFSNECKGDKIGLACHALPPSASADLNW 146
           ACP+A  +N   NDCASTMFSYINL+G+YPPG+F+N CK  K GL C  +  SASA  + 
Sbjct: 78  ACPFAEVLNDEKNDCASTMFSYINLYGRYPPGIFANMCKEGKEGLDCTDVTQSASATSDS 137

Query: 147 GSVTRLPSRLLILSAGFIL-LFWLS 171
                  + L +LS   +L L +LS
Sbjct: 138 IPRASTTASLAVLSTFLVLCLLFLS 162

[Close]

BLAST of Sed0020298 vs. TAIR 10
Match: AT4G28280.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3 )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 51  TACLVNFELLNYTIITSKCKGPQYPPSLCCPALTEFACPYAADINAVTNDCASTMFSYIN 110
           TAC  +F   NYTIITSKCKGP YP  +CC A  +FACP+A  +N    DCASTMFSYIN
Sbjct: 20  TACKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFACPFAEVLNDEKTDCASTMFSYIN 79

Query: 111 LHGKYPPGLFSNECKGDKIGLACHALPPSASADLNWGSVTRLPSRLLILSAGFI 165
           L+G+YPPG+F+N CK  K GL C  + P++S+     S+  + + +L+++   +
Sbjct: 80  LYGRYPPGIFANMCKEGKEGLDCTDVTPTSSSH---ASIPLVSTHVLLITVSIL 130

The following BLAST results are available for this feature:

BLAST of Sed0020298 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6592129.1	9.3e-65	77.51	GPI-anchored protein LLG1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022936417.1	2.7e-64	76.92	GPI-anchored protein LLG1 [Cucurbita moschata]	[more]
XP_023536509.1	2.7e-64	76.92	GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo] >XP_023536510.1 GPI-...	[more]
KAG7025004.1	3.5e-64	76.92	GPI-anchored protein LLG1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022976292.1	1.7e-63	75.74	GPI-anchored protein LLG1-like [Cucurbita maxima]	[more]

BLAST of Sed0020298 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKT1	4.8e-40	55.97	GPI-anchored protein LLG1 OS=Arabidopsis thaliana OX=3702 GN=LLG1 PE=1 SV=1	[more]
B3GS44	8.8e-34	48.10	GPI-anchored protein LORELEI OS=Arabidopsis thaliana OX=3702 GN=LRE PE=1 SV=1	[more]
Q9M0I0	1.7e-32	48.91	GPI-anchored protein LLG3 OS=Arabidopsis thaliana OX=3702 GN=LLG3 PE=2 SV=1	[more]
Q6NLF4	7.0e-31	48.28	GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG2 PE=1 SV=1	[more]

BLAST of Sed0020298 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8E1	1.3e-64	76.92	GPI-anchored protein LLG1 OS=Cucurbita moschata OX=3662 GN=LOC111443044 PE=4 SV=...	[more]
A0A6J1IFC4	8.5e-64	75.74	GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111476731 PE=4 ...	[more]
A0A6J1J2M4	4.2e-63	74.40	GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111480694 PE=4 ...	[more]
A0A6J1FTS4	2.7e-62	73.81	GPI-anchored protein LLG1-like OS=Cucurbita moschata OX=3662 GN=LOC111446763 PE=...	[more]
A0A6J1CGJ1	1.8e-58	70.41	GPI-anchored protein LLG1-like OS=Momordica charantia OX=3673 GN=LOC111010609 PE...	[more]

BLAST of Sed0020298 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56170.1	3.4e-41	55.97	LORELEI-LIKE-GPI-ANCHORED PROTEIN 1	[more]
AT4G26466.1	6.2e-35	48.10	lorelei	[more]
AT4G28280.2	1.2e-33	48.91	LORELEI-LIKE-GPI ANCHORED PROTEIN 3	[more]
AT2G20700.1	5.0e-32	48.28	LORELEI-LIKE-GPI ANCHORED PROTEIN 2	[more]
AT4G28280.1	1.1e-28	49.12	LORELEI-LIKE-GPI ANCHORED PROTEIN 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31533:SF2	GPI-ANCHORED PROTEIN LLG1-RELATED	coord: 13..167
IPR039307	GPI-anchored protein LORELEI-like	PANTHER	PTHR31533	GPI-ANCHORED PROTEIN LLG1-RELATED-RELATED	coord: 13..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020298.1	Sed0020298.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane